Lcy08g008900 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGGCGAAGATGAGTTGGCGAATTATTAAAAATCCTAACTCCCTGCTTTCTAAAGTGCTCAAGGGTAGCTGTTTTCTCAAAGCTCCCCTTGGATCAAACCCCTCGCTCACTTGGAGGAGCATTATTTGGGGTCAGGATCTTTTCAAGAGGGGCTATAGATGGAAGATTGGAAGTGGCAGTCACATTAGAATTGATAAGGATCCATGGATATCCAGGAAAAATTCTTGTGTGCCTTCGTGGGTTGACACCTCTTTAAAAGGGCATTAA ATGCTGGCGAAGATGAGTTGGCGAATTATTAAAAATCCTAACTCCCTGCTTTCTAAAGTGCTCAAGGGTAGCTGTTTTCTCAAAGCTCCCCTTGGATCAAACCCCTCGCTCACTTGGAGGAGCATTATTTGGGGTCAGGATCTTTTCAAGAGGGGCTATAGATGGAAGATTGGAAGTGGCAGTCACATTAGAATTGATAAGGATCCATGGATATCCAGGAAAAATTCTTGTGTGCCTTCGTGGGTTGACACCTCTTTAAAAGGGCATTAA ATGCTGGCGAAGATGAGTTGGCGAATTATTAAAAATCCTAACTCCCTGCTTTCTAAAGTGCTCAAGGGTAGCTGTTTTCTCAAAGCTCCCCTTGGATCAAACCCCTCGCTCACTTGGAGGAGCATTATTTGGGGTCAGGATCTTTTCAAGAGGGGCTATAGATGGAAGATTGGAAGTGGCAGTCACATTAGAATTGATAAGGATCCATGGATATCCAGGAAAAATTCTTGTGTGCCTTCGTGGGTTGACACCTCTTTAAAAGGGCATTAA MLAKMSWRIIKNPNSLLSKVLKGSCFLKAPLGSNPSLTWRSIIWGQDLFKRGYRWKIGSGSHIRIDKDPWISRKNSCVPSWVDTSLKGH Homology
BLAST of Lcy08g008900 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.6e-10 Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = 0
BLAST of Lcy08g008900 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.5e-19 Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 0
BLAST of Lcy08g008900 vs. ExPASy TrEMBL
Match: A0A6J1CV63 (uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014662 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.5e-19 Identity = 48/84 (57.14%), Postives = 61/84 (72.62%), Query Frame = 0
BLAST of Lcy08g008900 vs. ExPASy TrEMBL
Match: A0A803PQ30 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 0
BLAST of Lcy08g008900 vs. ExPASy TrEMBL
Match: A0A6J1CUD6 (uncharacterized protein LOC111014663 OS=Momordica charantia OX=3673 GN=LOC111014663 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.6e-16 Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of Lcy08g008900 vs. ExPASy TrEMBL
Match: A0A803P614 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.4e-16 Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of Lcy08g008900 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia]) HSP 1 Score: 105.1 bits (261), Expect = 3.1e-19 Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 0
BLAST of Lcy08g008900 vs. NCBI nr
Match: XP_022145148.1 (uncharacterized protein LOC111014662 [Momordica charantia]) HSP 1 Score: 105.1 bits (261), Expect = 3.1e-19 Identity = 48/84 (57.14%), Postives = 61/84 (72.62%), Query Frame = 0
BLAST of Lcy08g008900 vs. NCBI nr
Match: XP_030502375.1 (uncharacterized protein LOC115717530 [Cannabis sativa]) HSP 1 Score: 95.1 bits (235), Expect = 3.2e-16 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 0
BLAST of Lcy08g008900 vs. NCBI nr
Match: XP_022145149.1 (uncharacterized protein LOC111014663 [Momordica charantia]) HSP 1 Score: 94.4 bits (233), Expect = 5.4e-16 Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of Lcy08g008900 vs. NCBI nr
Match: XP_030479238.1 (uncharacterized protein LOC115696478 [Cannabis sativa]) HSP 1 Score: 91.3 bits (225), Expect = 4.6e-15 Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of Lcy08g008900 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11 Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = 0
BLAST of Lcy08g008900 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 64.7 bits (156), Expect = 4.3e-11 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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