Lcy08g008770 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g008770
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Retrotransposon protein
Location	Chr08: 17732892 .. 17748220 (-)
RNA-Seq Expression	Lcy08g008770
Synteny	Lcy08g008770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAACATAAAACTAGCAAGATTAAGACTAATTAAATAGGGCCAAATTGGTCCTATTAGAGCTCTAAGGGTTCTTTGGCACAATAACCTTTTCAAATAAAAGTTATTTAGTCATCTTGCCCTCGAGGCATGACTCACAAGGAGGTAATGAGACGTCTTTTAATTTGTTTAGAAGTTCATTCTTGGCCAATCTTCAATCCTACTGAAATTTAATATGACCTAACATCAAGTGCAAAAAATAGTTATCTTGAGAAACATGTTGCCTTTTAAGTTGAGTCTTTAGTAATTTTAAACATCTCATGAATTAAATGGCTCTAGACTCTAATGGTCTTTACACATATAAGTTATTCTCCATTTTGTAGAACAAATATTGGCATCCCTTTTGTGATGAACAGTTCATTGATTAAAAGGGTAATAGAATAGCCTTGTTCTAGCAAAACAAGATATAGAAATCAAACTTTTTTTAATCTTTGGAACTTTGCACATATTACCTAATAACATGTAACATTCATGAGAAGAATAACTTTATGTCTCCCACTGCCATAGCCGAGATGAACTCTCCTGTTTCAATTCTAAGGTTCATCTTACCAGCTCACAACTGTGGCCAGGAACTCATTTCGTGAAAAGAAGAACATACGAGATTAGTGAATTTGAATCAAGAATCCAAGCTGAATTACTATTCTCCACAAAACACGTTTTCAGGACGAGTAAATCATATTTAGAGTCTTTAGCATTCTTTCCTTCTGTTTGGTAGTTTTCTATGCCATATTCATCATGAACAATTCGAGATGAAATAGACACCGGATCCTGAAGACGTTCCTCAGCTAAGACCGTTTCTAGATCACCTTTCCAAGAGTAAAGCAATTACATTTATTTTTCTTAGTCATATAATTTATACCAGTAATGAATTAGGCGTATAGAAGAGGCACTTATAGAACTATTCATATTGCTGAAAACAAACAAATGAACTTAAATTGGTTGTCTAGTATTTAACCCATTACCTAATCCAATCAATTTAGCAAAAGTAATCATCGACCCTAAATAAATTAGAATTTCTTTTGCAACGATACTTCAGAGGTTTAGAGTAACTCCCATCGAGGAGTGATCAGTTACTCCTCTGAATTGAGACATTCTCAACCAAATCCTAACACCAGAATAACTCATATCCCGTTAGTGTTTAGTTACCATTGTTTGGTCAAGAAATCATTAACAACTTAATAATTTATCGTAAGTGTGACCTGCCATTTTCAGATCCCAGAGAACGACCCCAACAATGCTACCAAATGGAAAAGCTAATGTTGGGAATGACCCTAAGAGACCCTAAATTAATTCAATCTGAAAATCAATTATTAATTTTGAATTTGTAATTTTAAATTAATTCAAAATTAATTTAAAATTATTATTAATTAAATAATCAATTATAAAATTAATTTAATATCTAATATTAAATTAATATTTTGCTACCAATTTCGATCATTTCCGAAATGAAATTTCTCAACCATGAATCCCTATTCACGTGCTCGATATTTAAATCATATTTAAATATATCAAACTGTCAAAAATTAGGTTTAACCAAAAACCCGACGTGTCGGTAATATCCAATATGACCGATATATTCCCTAAACCGAATTTGAGCAATTCGAATTCTTTCCATCATATTGTTCCAAAGTTTATTCCTTAAGCTAGCAAGGGGACCTAATGGACCTACAGATCATGGGCCCCAACGATTCGAGGTTTAACAGGCCAAACTCTTTTAACCTAGTTAATCAACATTCGTTAACTACCGGTCACTCCACTATAGCCTAGTAGTTGCACTCCCCTCACTGTAGATATATTTCTATCCACTCGATATAACCATGATTAGTAAGTCAACCCTTCACAGGTCGTTCGTAACTATAGCTTGGTCAAAAATCCGTTTTACCCCTATAGCACTTCTTGATTCCTTAAGTCCACTGGTCCTCTAATGAACAATTTGTTTATGGTCCAACCACTAAACAGAGTCCCTCTCGGGCCAATGAGAGGGTGGGGCCCCTTGTTCAAGTCTCGAAGTCAGCACTTAAGGGAACAACATTTCTACTATCCTTAATATGGGTAGGAGTGAATTCCTTCTTGCAATACTATGTCCCCAGCTGTTCATCCAGTCTTATCCCCAAAATGGTAGGCTTATTGAGTGGCGATGTTTGGCCACTCTCACCCATGTTGATCAAAGGATAATCCTGAACAAATAGGAGTTCATAGTAAGTTCATGATTAAGATCGAGTTACCTAGGTCATCGCATGAAATAGTTTGTCTTAACAGTAAACGATGTTATAAAGTAAGAGTGACTTATTTCATGGTTCGGTCTTGTGTAAACTTCTTTTACACAGAATGCCCCTATTCGCATGTCTCTACATGAACAATCCAAGATCACATCGTTTGCCTTGTTCGCAAAGTAGGCAGCATCCATAGTGTCACCTGGATAAGGTACCCAGCCATATCCCTATACTATAGACCATTTAGGTTATATACTAGAACTTGATCCCTGTCCATATTCATACTATAGTTTGAGTATTTCATTTTATAACCAAGGATGTTTATCTATTGGATTTAGATTATATAAACAAACAATTCACTGAATAACATCTTTATTGCAAAAAGATTACAAACTATGCGTTTTAGGACATAAAACCCAACAAACTCCCACTTGGACTAAAACTCAAGTGAGGTAACAAAATGTCAGGAAATTAGCAATTACATCAAGTGCTAAAAACTCGTAGTCCTAAATTCTGGAGATGTCGCTCAAAGACTTTAGCCATGAGGGCTTTTGTAAATGGATCGGCCATGTTCTGCTCTAAGGCTATTTTTGTGACAATCACGTCTCCTCGCTATACAATCTCCCAGACGAGATGATATTTGCGTTCAATGTGCTTTCTTCATTTATGGCTTCAAGATTCCTTCAAATTTGCAACTTCTCCACTGTTATCACAATAGAGAGTGATAAGCAGATGCATGTTAGGAACTACTTCTAACTTAGTTAGAAATTTCCTAAGCCATATTGCTTCTTTTGATGCTTCACATGCGGCAACGTATTCAGCTTCCATCATGGAGTCAACAACACATCTCTACTTAATACTTCTCCACACAATTGCTCCTCCATTAAGAGTGAACACAGACCCAAAGGTTTTGCACCAACACATTGTAAGGTTAAAATCCCTTACGCAGCGAAAACGTATCAGAGAACCGCACTGAATTAAATAATGTTTAGAATACCCGTATGACGACAAAATTCACAGCATCTAAATCCAATTATAAAAGCTGTAAACAGATTATAAAACATGCTGTAATTATGAATAAAACCTAGATCTAGTCAAGTTTTATTCCTAGAATTCATAGGTTAAGAAGATACTTACTACTGTTGAAGTCTCTGAAGGAATTCTCCAAATCCTTAAACCTTTCTTCAATTTAACAGCAGCCCCAACGAACGCAAAAATCTTGCTGAAAATTTCACCAAATATTCGTGAACACCACCACACTAGAACCACCGATAAGGCTTCTTAAAGGTTTTGGTTGAGAAGCTTGTGGGAGCAATTCAACTGAGGGATTGGGAGAGGATAAGAATATGGAGAGCTTTCTATGAATCAGAGAGAAAAAATGTATGAAGTGCAGGAGAAAAGATTTAACTTCCTCTTCTATACGCTTTGAGAGAATGAGGGAGCAATTCTCGTGACCTCACACACGATCAGGAAAACTGATCAAATCAGTTAGCAGGTTTTTAATTTCAAAATAAATTAAAACCAAAAATCAATTTGATTAATAAAAATTAATTAAATTAATTATAACTAATTTAAATCACATTTAATTAGTTAATTCATTTGAATTAATATTTAAATGAACATCCCTCATTTACCATATAGTTTTAATTAAATCAAATTTAATCAAACTAAAACAAATAATTAATTAATTCTATAATTAATTAATCATCAAATTGAACATCGCATATTCAATTATATTTCTCTCATATAACCTATAGTTTTAATGTGCATCCAATGCACATTAATTTTAACCTATAGTTTTAATATGAATCCAATTCATATTTCAAATTTAATATTTGAACTCCTTGGAATATTCAATTCTTCCTTATATTAATTTTGAATCATTATCCCTATACTATAGAACCTTTAGGTTGTAACTTGAACAACGATCCCCGAATGTCCCCACATACAGTTCAAGTCTCATACTAACAGCCTAGGGTGTTTAGTTTATTGGATTAGGGATATTTAGACAAGATAAACACAATACAAACAATAATAAGTGAATAATACATCAAATGTCATTTTATTAATGTTCAGTCAAATGTTACATTTACTATCCACGAGTTTTAGGGCATAAAACCCAACAAACTCCCACTTGAACTAAAACTCAAGATAATGGGATGTATATACAAAAATAATCCAAAGTTGGAAATGGAAAATGTATACTGTACATTACATGAAAAGTAAATATACAAAATACAATAAACTAGGGCATCCTTATACTCATTACACATCTCCCACTTGCCCTAGATTATACAATATACATGTCTCGCAGACCTAGACTCTCTAGACGACCCTCGAACACTTTAGCCGAGAGAGCCTTCGTAAATAGATCAACAATGTTGTGCTCCGAAGCGATCTTGGTTATGATCACATCTCCTTGTTGCACAATCTCCCGTATCAGGTGATACTTCCTGTCGATGTGCTTTCCTCGTTTGTGGCTGCGAGGTTCTTTAGAATTGGCTACAGCCCCACTGTTATCACAGTATAATGTAATGGGCAAGTTCATATTTGGAACGACTTCCAAATCTGTCAAGAACTTCCTGAGCCAAACTGCTTCCTTAGCTGCTTCACAAGCAGCTACATACTCAACCTCCATAGTGGAGTCTGCTATGCATCCTTGGTTGATGCTTCTCCAGACTACAAATCCCCCGTTAAGGGTGAATGCTAACCCTGACGTGGATTTCCTAGAATCCTTTCAGACTGGAAGTCAGAATCGGTGTATCCTGTAAGGACCAAATCTTTAACTCCATACACCAGCATGTAGTCCCTCGTTCTCCGAAGATACTTGAGGTCACCTTTTACGGAGGTCCAGTGGTCTAACCCTGGATTAGACTGATACCTGCTGACAATCCCTACTGCATAACAAATGTCAGGCCTAGTGCAGAGCATAACATACATTAAGCTGCCCACAACTGAGGCGTAGGGAATGCGTCCCATGTCCTCAATTTCTTGAGGTGTCTTAGGACATTGCTCCTTAGACAAGTGAACCCCTTGCCCGAAAGACAATAAACCCTTCTTGGAGTTCTGCATCGAATATCGAGACAACATCTTGTCGATATACGTTGCTTGAGATAGTGCTAGCATTTTGTTCTTACGATCTCGAATAATTTGGATCCCAAGAACATATTGGGCCTTTCCTAAAACTTTCATTTGGAATTAGGCCGCTAGCCAATCCTTAACGTCACACAGGTACCCTACATCATTCCCAATGAGTAGGATGTCATACAGTACTAGAAAAGCTACCTAGTTTTTGTTGATTTTCTTGCAAACACAAGGATCATCAACATTTTAGTCAAAACCAAAAGATTTGATCACAGTGTCATATCTAATGTTCCAAGATCTGGAGGCCTGTTTCAACCCATAAATGGATCGATTCAGTTTACAAACCTTTTGCTCCTGACCTTGGGTTATGAACCCTTTGAGCTGAGACATAAAGATATTCTCTTCAAGATTACCATTCAAAAAGGTAGTTGATAGGACCTAAATAGTCCTATTTTATCGCCTCTAATCTAAGCTTGTTAGAGTCATTTTACGCTTTACTTGTCCTATTTACAGGTTAATTGAGGTTAGGCTATGTCGGGAGCCGATCACGCTAATTGGTGTTAATTCAGGCGAATTAAGGAGTTTTTGAGCCATCTCGATGTCTTGGACGACGAGGAGGTGAAGAGACCCAATTGTGCTGAAGCGGGCCTGAAGAATTGTTGGGGTTGGTGCCCTAAAACTCGTAGATAGTGAATGAAACAAATAGTTATATACTTGTGTTCGATAAAGTCGTTATTGAGTTTTCGTTCACTCAAGTTATTAAAATGAGTGAATTGCACGTTAAATAACCCTAATCCAATAAACTAGAATCCTTGGCTATGATATGAATACTTGAACTTTGTGTAGTGACATAAAAGTGGATCAGGTTCAAGTACATAGCCTAAACGGTATATAGTATAGGGATAAGACTGGGTACTTTAATCCTAGGAAACACTATGAGACGCGACCCACTTTGAAGTGTTATAAACCGAGATAGACGCTATGGAACCACCTTAGCATAAATGAATGTTATAGATTTATCGTTCTTTATGAAGTGTTATAAACCGAGATTGACGCTAAAATCTATAACAAGATAAAAGCATGCTCACTTAGGGTTAACTAACCTCCAACTTGAACAATTCGCATAGAATAGGTCGATATCTTGTAAAACTAAGGTTACAAGAGAACTCACCCGACGAGATGCTGTCTAAGGCTGGAGGTATTTAAGTTGACGGTTTACGGAACACCTCCTACCTAGGCATCGAATTGGTACTTGAGTTAAGTTAACCCGAGTTTTATGAGCATGCGTGAGTGATAACTCTCCAAAAGGGAGTTATTTAGGCCTTATTTCTATAGTGATTTGTGTGTCTTTAGTGCCTAATAGGATTACTTTTAGATGAATATTATGTGTTTTAACCTATTTAGAAGATTAGATGCTTTAGAAGTTATTTTGCAGAGAAAACTTGAGGGAGCAAAATCCATGATCCAGCAAAGCGAGAAGCAAAACTGCCACGTGAGCCGCACGTGATTCATTAATGAGGTGGCGTTAGCTGAATTAATCTCAGATCTAGGAAGCTTGGAAAGCCCTCCACGTGTAAAATTTGACCTAATTAGGGTTGACTCCACTCTATAAAAGGAAGCAGCCGTTTCAAGTCCAAAACATTCCAAATTCAAGAGATGAAAGCCTTATTCCATTCGTGGAGGCTTACTTCCCATCTTTGGAAGCCGAATAAAGGAGCAACGATTGGAGACCTCAAGAAGACCATCAACTACGAATTTCTTCAAGGGAATTAATATTTTCTTGTAAATTTCTTGTAGTTATGGATGCACATACTCAGATTGTAGCGTGTGTTATTTTGTACTCCATGAACTAAATTTACTTAGGTGTTGGTTGGGATGTCTTGCTTCATTCTCTATGTAATTGATATTGATTTGAGCATCTTGATTATTTGTTGTGCTTATTTCTATTTTGTGCCCGCCTGGCCAGCCGGTATGAATATCACTTCTTAGTTTCAGGGATGATTTGAGAGGTGTGTGACATTTAATCACACTAGACCATTATGTGTTGGTGGACGCCAGTAACTGAGTTAGGGATAACTAGTCACCTAGTGCTTGACCAGTAGCACGTCATTGGAGTTGAAACACATTTCAAAAAATCCAGAGTTTCGGGAGGATCCTGCTGATAAGACTGCAAGAGAATTGCCTAATCAATATTATTGCTAGAGCATCTTTTCAAACAATTACAGAAATCCTGACCAACGCCTGTTTCCAATCTGTCTGCTTTATTCGTTTACTTTCTGCTCTGTTATTTCTTTTGCTTCGGCATTTTATCAAAATCAATCATTTTAACAATCTTGAAACCATTAAAAAGTTCAAAACCTCGTGGATACAATAAATTACTTATCACATGCTGCGGATTGTGTATACTTGCACAGTATTATAGAGCTTATTTTTATCATATTTTTACCCCACTCTAGAAGGCAACAAGTTTTTGGGTTCGTTGCCAGGGACTTGAATAAGAATACTCAGAGAGATGATTAATTTAACATAGAAATATCACTGATATGCATTAATCCAAGTATAAATTAAACATAAACAAGTAATACCTAGAGTATTCTAGGGTCGAATCCACAGGGAAGGAAAGCTAAGGGATTTTAATAAACTATACTACTGAACACTCAAACACATGGTTTTATGGATAAACTTTTGAATAGTGATGACTGTAATGGAATGACAATGTGCTGCGAAATAAACTATGCGATGAAATTAACAAAAATATCAGATGACAAGGCTATCAAGGCTATCAAGGCTTTTGCTGCGGCAACCACATGCATTAATAAGCTATCTTGTAGCACATATTTTGCTTAATTGATCCATTAATGCTTAAGTGAGAAATAAACATGTGATTCCCTTCCGGTACTACTCATGCGTTTGGCATAGAACTAACAACTGCTTTGTTCAATTAGTTCATGCGTTGGTGCTGTTCTCGAATGACTTGCAAGTGACTACGTTAGTCCTAAAATAGTCTAAACACATTCATGAAATATCTTATTGCGGCAGTATTAACTATAACACAACCAAGACTACATGCAATGCGCTAACTTGTTCTACTTAGATAATTCCACATGCATTACCTGTCAGGGATTTATCATGCTGCTACTGCTTCCGGCTGGCCAGGTGAGAGTTAGTAATGAAAATATTATCGCATCTAAGCAGAAAGCATTAATTTTTCATTCATTCAAAATGTACGCATACAGAATAATCATATCACTGCATGGGTGCCTAAGCTAAGCCTTGATAAGAGTGAATTAGCTCATGCTAAAACAGAAAAACATAACGCAATACATCATATCACAATGATTTCGCTGCGCTGGGAGAATCTTTCCTCTTCTCTAGTTTCTTTCTTTAGCTGTGTGCTCTCTCCACTCTCCCCCCTTTTTCTTCTGGCAGCTGGCCGCTTCTTATAGGCTGAGGAAGCTGACTTCTCCAAGAAATTGGCTTGCTTGCCCCAGTCATCTTTTGCCAGCTTGCACATCAGTCACACATCAGAGCGATCATCTTTCCAGCTATCATCGTACGAATTATGCTCTGGGATTTGCGCCTGTGCTGGAGAAAACTTGGGCAAGGAAACAACTACAAATTCATGCGTTAGCGGGTAAAATCACACAATTTCCAACCGCATCTAAAAATACTTCTTTTTAAGATTAGCTACCTCAATTCCCTCATTATTATGCGTTAGACCAACGCAACTTGGATCTTTTTAGCCTTATTTAGTTTAAATTTAAGGGAGAAATAACTTGCTTTTTGCAAGTTATCAAACCCCCAAACTTAATCTATTGCTTGTCCCCAAGCAAAATCTTCTATCTACTCTGCGAGAATGACTTAGCTCAACTTCTTTGGACTCTTACATCCCACTTTTTCCTCATCTTTTTCTATGAGACTAAAACAAAGGATTTGGCCTTCCACTAAATTTCCTTTTTGGGCAAGGATTATTCCTGCATTGAGATGCTCTATCTTGCGTCAACACAGCAAACTCTCTACTGATAGGCTTATGTGCAAGATATATATATATATACTTAAGCAGAAAACATTAATTTATCGACATGAAAACGCATGCTTTCGTTTTGGCTTACCCACACTTGTGGTGAAAGGTATCCAACTACGGGCATTACATTTTTTTTACTGTCCTAAACGCTCATGGGATACAAATGCGCTTTCCCGCAGAGGCAAACGATTGGTGTCATGAATGCCCCTAGCTACCAACGCATAGAAACCAAAGGAACGCATACACATGACTTGCACTAACGATCGCACCCCCAACTGAAATTAGACAATGTCCCCATTGTCCCCCAAACTTAAAGTGGAGTGCGATGGATGATGGAGAAGCTTGCTGAGCTGCGACCGAGACTAAAGCACTAAGCAAAAAGAAATTTTCCTAAGGCAAAAGGGGAATATAACTAAAGGGAAATCCTTCGTTTAAAAGCCTGCAGTGAAAAAGATATCCAAAAAAAATGGGATGCGAAGAGCAAAGCCGAAAAGCTAACGCAGAGGATTTAACAGATTTAGGTATTCTGCTAAGGCTTATGAGAAAATGTGATAGATCAGACAAAAGAAGATATTTCATTCATGCGATAAGAAATCGTGTACAATATAAGTTTGCGCATGACAAAAAGAAATTCATAAGTACAGAAAAAAAAATCTTTACTCTTGCGGTGGCAGTGGGCGGGGATGTCTGGGCGGCGGCGGGGGCATGTGCGGGAGCACGTGGGAAGGACCGGCGCCATCTTGTCTTGGCAGCCATTGGGGGCGTGCGAAGAGCTCTGGCGCAACGACAACCGGCCAATGAAATTCGTCCAGCGCACTAAAAATACCATCATTGAGTTGATGCGTTGGGAAAGCTCATTTTGCTGTTGGCGCAGGGGCTCGACAATTTCGTTAATTTGCCGCCTCATTTCTGTAAACACCTGCGCTTCTGATAACTTCCAAAAAGCAAGTTATTTATCCTTTAAACTCAGGCTAAAACAAGGCAAAAAGATACATTGATGCGTTACTTCAGCGCAATAAGGAAGGAATATGCGATGGTTTTCTGCGATAGGCTATAATTATGTATGCGGTACGAAATTATAAAAGTATAGGGTGATAACGCAATTGATTCAGTTGTATGTTGCCCAAGTTTCTCTCAGCGCAGACACACATCCCAAGACGATCATGGGACAGACAAGATGGATGAAAAAACCATGCTGACACACTGACGCGCAAGTGGGCTAAAAGACGTGCAAGTGGGCTGAAGATGACTGAAGCAAGCATCTAATTCCTTGGAGAAGTTAGTTTCCTTCGCCTATAAATAGAAGCCATCTGCTCAAATGAAAGGAGAGAAGGGAGAGAGACGAAGATCAAAGCAGCAAAGGAGAAAGAGAAATCACAGAGAGCTGTGATTAAGAGTAGACTTGCATTTGCAATGTATTGCGTAATGTATTATTTTGCTCGCAAGAGCTAATTTTCTTCATCAAGGCTTAGCGCAAGCACCCATGCGGTGATAAGTCTATTTTGTAAGTGCATACTTTGATTTAATGAAACATTATTGCCTTCTACTTAGTTGCGATACTATTTTCATTACTAACTCCCGTCTGGCCAGCCTGATGTGTTAGCAGCATGCTAAATCCCTGACAGGTAATGCATGCGGACATATCTAAGTAGAACAAGTTAGCGCATTGCATGTAGCCTTAATAGCATTAGATAAATACTACCGCTAAAAGATAGTGCATGAATGAGCTTTGATTTCGTTAAGACTAACGCAATCCCTTGTAAGTTGCTAGAGAACTAAGCCCACGCATGAACTAGCCAAACAAACATTTGATAGTTTTATGCCAAACGCAGAAGTAGTACCGTAAGGGAAACTTGTGATCTTTTCTCACTTAGGCATTAATGGATCAATTAGTCATGGTATGCGCTACAAGGTTCTTATAAACGCATGAGGTTGCAACCGCAACAGCCTTGATAACATTCTCCTTAAGACTTCCCTTTTTACTCTCAACACATGTTTTACTTTCCTGTAATATTTAATCTTCATACTCATCAACTCTCTTATTTAGTTTTTCATAATATCACGCGTTCTTGGGTTCAGATCAGTAAAAATTATTAAAGCTTTGCAAATAGCCTTTCCCTGTGGATTCGACCCTAGACTCACTAGGTATTACTTGATTGTGTCAATTTATACTTGGATTGATATATATCCACGATAATTTTGTATTAATTTATTTACATATTGACAACCGATCAAGTTTTTAGCGCCGTTGCCGGGGAAAGGCAACGAAATTTTAATAATCTTTTTGATCTAACACTCCGTTTGATATTTTTACCGTGTTTCCTGTTGAGTAATTTTTCTCCAGGGAACCGTAGAGTGCATGCGTGCTGCTCGCCAGATTGATTTTGAAGTTGATCCTGAAATTGACTGAACTTATCATAGAAGGAGAAGAAATCGACGAGCCCGAAGACGACCAGGAGAAATGGCAGCACCAAACCAACCAAACAGATCGGTAAATCCCATCCAAATGGCTAATGATAGAGTCAGAGGGGTCAGAGATTATGCAGCCCCTACAAACTGTAATTTCAACCCAAGGATAGTACAACCCACCTTGGAAACAAAAAGGTTTGAGCTAAAACCTGTTATGTTTCAAATGCTGACTGCTGCAGGACAATTCGGAGGAAGTCCAGCTGAAGATCCACACTCTCATCTAAAATCATTCTTGGACATTTGTAATAAATTCATCATCCCAGGAGTAACGCATGAGCGCAAGTCATCCTATTTCCCTATTCATTAAGAGATGCGGCGAAAGTATGGCTAAATCAGCAACCAGCAAATTCCATTGCGACATGGAATGATTTAGTCGAGAAGTTTCTAGAAAAATACTTTCCACCTACCGCAAACTCGAGGCTAAGGAAGGAAATCATGACTTTTTCTCAGATGGAAGACGAAACACTTAGTGAGGCATGAGAACGTTTTAAAAGCCTATTGGAAAGGTGTCCGCATCACGGACTACCACTCTGCATTCAGATAGAGACCTTGTACGTGGGTCTCAACAAAAATTCACAAGTATTAGTAGATTCATCTGCTAATGGTGCGCTCCTCAGAAAAACTTATGATGAAGCTCACACAATTCTCGATCGCATTGCGCACAACAATTATGAGTGGGGCACTGTGGAAGACAAAAGAAGAAGACCTATAAAGACCAGTTCTGGAAGTTTTGAGGTTGACCCACTCACTTTAGTCAACGCAAAAATTGATGCGTTGACTACCAAAATGGATGCGCTCACAGCAAGCACAACACCATTGATAGCGCAACTCAATACAGTTGGATGCAGGATCTGCGGAGAAGGACACACGTGACCAGTGTCCTTCGAATCCAGAATCTGTTTTCTATGTGGGATCACAAGGAGCTGTGCGCAACAACCCATTCTCGAACACGTATAACCCAGGATGGAGGAATCACCCAAATTTCTCATGGAATGGTGGCGCAAACAAACGGCCACAACAAGGTAATGCAAACCCTGCGCCTAGATTATTTAACTCTAACAGTGAGCAGTCATCGCAGGGCCAATTTCAGCGCAATATCAACGCAGAAGGTGGAAACCAAAGAGCATCATCTTCAAATGCGTTAGAAACCATGATGAAAGAATTTATGGCAAGCCAGAAGGAATACATGGCAAAGAACGATTCGGTGGTTCAAAGCCCCCGCATCCTTGCGAAATCTAGAAATGCAGGTGGGACAGCTTGCGTCAGAGCTTAAAAATAGACCTGCGGGAGCATTACCTAGCAATACAGAAGATCCAAAAGGAAAGGAGCACTTCCACGCACTAACTCTCCGTAGTGGGAGACAGCTGCAGTCAAATGACCCTGCGACAGCGCAGGAAAATTTGACTAAAACCGCAATCGCAACAGGCAGCAACCAAGAGTAAGAAGAGAACGCAGCTGAAGAAGAGCCCAAAAAGAAAGAAGCATACACAGAGAAAGAACCTGATGCATACAAACCCACAATCCCTTTTCCTCAAAGATTAAGAAAGAAGAATGACGAAACCCAGTTCATGAAATTTTTAAGTGTCTTGCGAGAACTTCACATCAATATTCCACTTGTGGAAGCATTGGAAAAAATGCCTAGCTACGCAAAGTTCTTGAAGGACATCTTGTCGAATAAAAGACCATGGAAGGAATTTGAGACAATTGCGTTGACAAGTGAATGCAACGCAATACTCGCCAACAAACTCCCACCTAAATTGAAAGATCCTGGAAGTTTCACGATTCCCTATTCAATAGGAGGGATTGATGTTGGCAGAGCCTTATGTGACCTCGGCGCAAGCATCAATTTAATGCCCCTGTCAGTATACAAACGCCTAGGGATTGGAGAAACATGCCCAACCACTGTCACGCTTGAACTGGCAGATAGATCAGTGGTACATCCCGAAGGAAAAATTGAAGATGTTCTGGTAAAAGTGGACAAATTCATTTTTCCAGCAGATTTCATCATACTTGATTACGAAGCTGACAGGGAAGTTCCCATTATTTTGGGAAGACTGTTCCTTGCGACTGGCCAGACATTAATTGATGTGCAAAAAGGAGAGCTAACCATGCGCATGAATGATCAAAAAGTGGTTTTTAATGTGCTCACCTCATTAAAATACCCATATGACACCAAGGAATGCGACATGGTGGCATGCCTAGATGTATGTTCCCCACTTGAAATGCTACAATTAAATGCTCTCAGAACTGCGCGAGAAGAAGCAAAGGAAGAACAAGCCGCAGGAGAGATAGAGGATAATTGCATCCTAGCGCAACCCACAGAAGTAAGTCATGCGCTAGATCTCAAAGAAAGAATTCCCACCTTACCTTCCAAAGTGCAACCACCTGTGCTAGAGCTAAAACCACTCCCAACGCATCTGAAGTATAAGTTTTTGGGAGAAGGAGAATCTCTGCCTGTAATCATTTCATCAAAGTTGGATCAGCCGCAAGAAAGCCTTCTGATGCAGGTACAGATAAACAAACGAAACACATCTGGACGAGACAGGAGGAGGCAAGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGTTGGATGGAGAGGGGACAACGGGACCTTCAGGCCCGGATACCTACCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACGTCCGTAATAGACTGCAAGGTACGGTCCTTGAAACGGCAATACAGTGCCATCTCAGAGATGCTGGGTCCGGGCTGCAGTGGATTCGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAAGGAGGTATATGATGCATGGGTGAAGGTACGATCACTAGTCATTAATTGATGTAACTCATGTACACTATCGTTGCTAAAACACTCTTCAATACATGCAGTCACACTCGAGCGCAAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGCATCTTGCTTTCTTGTTCGCCAAAGACAGGGCGAGCGGCGGCGCGTGTAATGTTCCAGCGGAACAGGCTGACAGCACCCACGGGGACGACGAGGGTGATCAGAATGTCCAAGCGACACAGGATTGTTATGTCCCCGCTCCTCCGGACATTAATTTGGCTGCGGACATGGACTTCGAGGACGTCCCCATCACACCGACAAGCCGACCAAACAATACAGGGTCCTCCCAGAGTCGAAAGCGGAGCAGAGCTTCATATGAAGCTGAAGCCCTTGATATTATGAGGCAGTCAGTGGCTATGCAGAAGACACAGTTCACTAAGATCGCTGACTGGCCGGACGCCCAAGACGCGCAAGAGTTCAAGAGGCGGGACACGGTAGGAGAGATGCTCCTGGCGCAACAAGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTCTTCGCCGACCCAAAGATGAAAAATATGATGTTGTCTGTGCCACCGACCCTCAGGCTTCGCTTCCTACGAGGACTACTCAACGAACGCCAGTGA

mRNA sequence

ATGGAGGAGGCAAGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGTTGGATGGAGAGGGGACAACGGGACCTTCAGGCCCGGATACCTACCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACGTCCGTAATAGACTGCAAGGTACGGTCCTTGAAACGGCAATACAGTGCCATCTCAGAGATGCTGGGTCCGGGCTGCAGTGGATTCGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAAGGAGGTATATGATGCATGGGTGAAGTCACACTCGAGCGCAAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGCATCTTGCTTTCTTGTTCGCCAAAGACAGGGCGAGCGGCGGCGCGTGTAATGTTCCAGCGGAACAGGCTGACAGCACCCACGGGGACGACGAGGGTGATCAGAATGTCCAAGCGACACAGGATTGTTATGTCCCCGCTCCTCCGGACATTAATTTGGCTGCGGACATGGACTTCGAGGACGTCCCCATCACACCGACAAGCCGACCAAACAATACAGGGTCCTCCCAGAGTCGAAAGCGGAGCAGAGCTTCATATGAAGCTGAAGCCCTTGATATTATGAGGCAGTCAGTGGCTATGCAGAAGACACAGTTCACTAAGATCGCTGACTGGCCGGACGCCCAAGACGCGCAAGAGTTCAAGAGGCGGGACACGGTAGGAGAGATGCTCCTGGCGCAACAAGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTCTTCGCCGACCCAAAGATGAAAAATATGATGTTGTCTGTGCCACCGACCCTCAGGCTTCGCTTCCTACGAGGACTACTCAACGAACGCCAGTGA

Coding sequence (CDS)

ATGGAGGAGGCAAGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGTTGGATGGAGAGGGGACAACGGGACCTTCAGGCCCGGATACCTACCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACGTCCGTAATAGACTGCAAGGTACGGTCCTTGAAACGGCAATACAGTGCCATCTCAGAGATGCTGGGTCCGGGCTGCAGTGGATTCGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAAGGAGGTATATGATGCATGGGTGAAGTCACACTCGAGCGCAAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGCATCTTGCTTTCTTGTTCGCCAAAGACAGGGCGAGCGGCGGCGCGTGTAATGTTCCAGCGGAACAGGCTGACAGCACCCACGGGGACGACGAGGGTGATCAGAATGTCCAAGCGACACAGGATTGTTATGTCCCCGCTCCTCCGGACATTAATTTGGCTGCGGACATGGACTTCGAGGACGTCCCCATCACACCGACAAGCCGACCAAACAATACAGGGTCCTCCCAGAGTCGAAAGCGGAGCAGAGCTTCATATGAAGCTGAAGCCCTTGATATTATGAGGCAGTCAGTGGCTATGCAGAAGACACAGTTCACTAAGATCGCTGACTGGCCGGACGCCCAAGACGCGCAAGAGTTCAAGAGGCGGGACACGGTAGGAGAGATGCTCCTGGCGCAACAAGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTCTTCGCCGACCCAAAGATGAAAAATATGATGTTGTCTGTGCCACCGACCCTCAGGCTTCGCTTCCTACGAGGACTACTCAACGAACGCCAGTGA

Protein sequence

MEEARLVESLVELVHEVGWRGDNGTFRPGYLPRLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFPHYEHLAFLFAKDRASGGACNVPAEQADSTHGDDEGDQNVQATQDCYVPAPPDINLAADMDFEDVPITPTSRPNNTGSSQSRKRSRASYEAEALDIMRQSVAMQKTQFTKIADWPDAQDAQEFKRRDTVGEMLLAQQELSDDERVALMRILFADPKMKNMMLSVPPTLRLRFLRGLLNERQ

Homology

[Close]

BLAST of Lcy08g008770 vs. ExPASy TrEMBL
Match: A0A5A7TN44 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003610 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.2e-50
Identity = 123/297 (41.41%), Postives = 170/297 (57.24%), Query Frame = 0


Query: 2   EEARLVESLVELVHEVGWRGDNGTFRPGYLPRLKRMIKDKMPTCTIESTSVIDCKVRSLK 61
           EE  LVE L+ELV   GW+ DNGTFRPGYL +L RM+ +K+P C + +T+VIDC++++LK
Sbjct: 16  EEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLK 75

Query: 62  RQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFPHYEHLAFL 121
           R + AI+EM GP CSGFGWNDE KCI AEKE++D WV+SH +AKGLLNKPFP+Y+ L ++
Sbjct: 76  RTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYV 135

Query: 122 FAKDRASGGACNVPAEQADSTHGD-----DEGDQNVQATQDCYVPAPPDINLAADMDFED 181
           F +DRA+G      A+   +  G      D GD N           PP  +   D+  +D
Sbjct: 136 FGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNED--------FPPVYSQGVDISQDD 195

Query: 182 VPITPTSRPNN--TGSSQSRKRSRASYEAEALDIMRQSVAMQKTQFTKIADWPDAQDAQE 241
           V  +  SR ++  TGSS S KR R S     L+ +  ++     Q  +IA+WP    A +
Sbjct: 196 VRASRPSRASDGRTGSSGS-KRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLAND 255

Query: 242 FKRRDTVGEMLLAQQELSDDERVALMRILFADPKMKNMMLSVPPTLRLRFLRGLLNE 292
              R     +L    EL+  +R  L R LF+        + +P   R  F R LL +
Sbjct: 256 NHVRTEFFRILREMPELTSLDRALLQRHLFSRMDDLRGFVLMPEDEREGFCRVLLRD 303

[Close]

BLAST of Lcy08g008770 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.1e-50
Identity = 118/296 (39.86%), Postives = 167/296 (56.42%), Query Frame = 0


Query: 2   EEARLVESLVELVHEVGWRGDNGTFRPGYLPRLKRMIKDKMPTCTIESTSVIDCKVRSLK 61
           EE + VE LVELV   GWR DNGTF+PGYL +L+RM+ +K+P   I+ +S IDC V+SLK
Sbjct: 16  EEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLK 75

Query: 62  RQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFPHYEHLAFL 121
           + Y AI+EM GP CSGFGWN+EF+CI AE++++D+W+KSH +AKGLL+K FP+Y+ L+++
Sbjct: 76  KTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYV 135

Query: 122 FAKDRASGG--------ACNVPAEQADSTHGDDEGDQNVQATQDCYVPAPPDINLAADMD 181
           F KDRA+G           NV     D+    D  D+++       V   PD       +
Sbjct: 136 FGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPD-------E 195

Query: 182 FEDVPITPTSRPNNTGSSQSRKRSRASYEAEALDIMRQSVAMQKTQFTKIADWPDAQDAQ 241
              +     S   N  S   RKR    Y  E ++++R  +     Q   IADWP  + A 
Sbjct: 196 MFGIRAGQASERRNCSSVSKRKRGSERY--ETVEVIRSVMEFGNEQLKAIADWPKEKRAM 255

Query: 242 EFKRRDTVGEMLLAQQELSDDERVALMRILFADPKMKNMMLSVPPTLRLRFLRGLL 290
           E + R  V + L    +L   +R  LM+ILF   +     LS+P  L+L +   LL
Sbjct: 256 EVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILL 302

[Close]

BLAST of Lcy08g008770 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.1e-50
Identity = 118/296 (39.86%), Postives = 167/296 (56.42%), Query Frame = 0


Query: 2   EEARLVESLVELVHEVGWRGDNGTFRPGYLPRLKRMIKDKMPTCTIESTSVIDCKVRSLK 61
           EE + VE LVELV   GWR DNGTF+PGYL +L+RM+ +K+P   I+ +S IDC V+SLK
Sbjct: 16  EEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLK 75

Query: 62  RQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFPHYEHLAFL 121
           + Y AI+EM GP CSGFGWN+EF+CI AE++++D+W+KSH +AKGLL+K FP+Y+ L+++
Sbjct: 76  KTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYV 135

Query: 122 FAKDRASGG--------ACNVPAEQADSTHGDDEGDQNVQATQDCYVPAPPDINLAADMD 181
           F KDRA+G           NV     D+    D  D+++       V   PD       +
Sbjct: 136 FGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPD-------E 195

Query: 182 FEDVPITPTSRPNNTGSSQSRKRSRASYEAEALDIMRQSVAMQKTQFTKIADWPDAQDAQ 241
              +     S   N  S   RKR    Y  E ++++R  +     Q   IADWP  + A 
Sbjct: 196 MFGIRAGQASERRNCSSVSKRKRGSERY--ETVEVIRSVMEFGNEQLKAIADWPKEKRAM 255

Query: 242 EFKRRDTVGEMLLAQQELSDDERVALMRILFADPKMKNMMLSVPPTLRLRFLRGLL 290
           E + R  V + L    +L   +R  LM+ILF   +     LS+P  L+L +   LL
Sbjct: 256 EVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILL 302

[Close]

BLAST of Lcy08g008770 vs. ExPASy TrEMBL
Match: A0A5A7T091 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9475G00160 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.6e-49
Identity = 122/297 (41.08%), Postives = 168/297 (56.57%), Query Frame = 0


Query: 2   EEARLVESLVELVHEVGWRGDNGTFRPGYLPRLKRMIKDKMPTCTIESTSVIDCKVRSLK 61
           EE  LVE L+ELV   GW+ DNGTFRPGYL +L RM+ +K+P C + +T+VIDC++++LK
Sbjct: 67  EEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLK 126

Query: 62  RQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFPHYEHLAFL 121
           R + AI+EM GP CSGFGWNDE KCI AEKE++D WV+SH +AKGLLNKPFP+Y+ L ++
Sbjct: 127 RTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYV 186

Query: 122 FAKDRASGGACNVPAEQADSTHGD-----DEGDQNVQATQDCYVPAPPDINLAADMDFED 181
           F +DRA+G      A+   +  G      D GD N           PP  +   D+  +D
Sbjct: 187 FCRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNED--------FPPVYSQGVDISQDD 246

Query: 182 VPITPTSRPN--NTGSSQSRKRSRASYEAEALDIMRQSVAMQKTQFTKIADWPDAQDAQE 241
           V  +  SR +   TGSS S KR R S     L+ +  ++     Q  +IA+WP    A +
Sbjct: 247 VCASRPSRASEGRTGSSGS-KRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLAND 306

Query: 242 FKRRDTVGEMLLAQQELSDDERVALMRILFADPKMKNMMLSVPPTLRLRFLRGLLNE 292
              R     +L    EL+  +R  L R L +        + +P   R  F R LL +
Sbjct: 307 NHMRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRD 354

[Close]

BLAST of Lcy08g008770 vs. ExPASy TrEMBL
Match: A0A5A7TRV1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold153G00290 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.0e-49
Identity = 122/297 (41.08%), Postives = 168/297 (56.57%), Query Frame = 0


Query: 2   EEARLVESLVELVHEVGWRGDNGTFRPGYLPRLKRMIKDKMPTCTIESTSVIDCKVRSLK 61
           EE  LVE L+ELV   GW+ DNGTFRPGYL +L RM+ +K+P C + +T+VIDC++++LK
Sbjct: 16  EEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLK 75

Query: 62  RQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFPHYEHLAFL 121
           R + AI+EM GP CSGFGWNDE KCI AEKE++D WV+SH +AKGLLNKPFP+Y+ L ++
Sbjct: 76  RTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYV 135

Query: 122 FAKDRASGGACNVPAEQADSTHGD-----DEGDQNVQATQDCYVPAPPDINLAADMDFED 181
           F +DRA+G      A+   +  G      D GD N           PP  +   D+  +D
Sbjct: 136 FGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNED--------FPPVYSQGVDISQDD 195

Query: 182 VPITPTSRPN--NTGSSQSRKRSRASYEAEALDIMRQSVAMQKTQFTKIADWPDAQDAQE 241
           V  +  SR +   TGSS S KR R S     L+ +  ++     Q  +IA+WP    A +
Sbjct: 196 VRASRPSRASEGRTGSSGS-KRKRGSQRDFELEAIHLALDQTNEQLREIAEWPARNLAND 255

Query: 242 FKRRDTVGEMLLAQQELSDDERVALMRILFADPKMKNMMLSVPPTLRLRFLRGLLNE 292
              R     +L    EL+  +R  L R L +        + +P   R  F R LL +
Sbjct: 256 NHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRD 303

[Close]

BLAST of Lcy08g008770 vs. NCBI nr
Match: KAA0044610.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 208.8 bits (530), Expect = 6.5e-50
Identity = 123/297 (41.41%), Postives = 170/297 (57.24%), Query Frame = 0


Query: 2   EEARLVESLVELVHEVGWRGDNGTFRPGYLPRLKRMIKDKMPTCTIESTSVIDCKVRSLK 61
           EE  LVE L+ELV   GW+ DNGTFRPGYL +L RM+ +K+P C + +T+VIDC++++LK
Sbjct: 16  EEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLK 75

Query: 62  RQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFPHYEHLAFL 121
           R + AI+EM GP CSGFGWNDE KCI AEKE++D WV+SH +AKGLLNKPFP+Y+ L ++
Sbjct: 76  RTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYV 135

Query: 122 FAKDRASGGACNVPAEQADSTHGD-----DEGDQNVQATQDCYVPAPPDINLAADMDFED 181
           F +DRA+G      A+   +  G      D GD N           PP  +   D+  +D
Sbjct: 136 FGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNED--------FPPVYSQGVDISQDD 195

Query: 182 VPITPTSRPNN--TGSSQSRKRSRASYEAEALDIMRQSVAMQKTQFTKIADWPDAQDAQE 241
           V  +  SR ++  TGSS S KR R S     L+ +  ++     Q  +IA+WP    A +
Sbjct: 196 VRASRPSRASDGRTGSSGS-KRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLAND 255

Query: 242 FKRRDTVGEMLLAQQELSDDERVALMRILFADPKMKNMMLSVPPTLRLRFLRGLLNE 292
              R     +L    EL+  +R  L R LF+        + +P   R  F R LL +
Sbjct: 256 NHVRTEFFRILREMPELTSLDRALLQRHLFSRMDDLRGFVLMPEDEREGFCRVLLRD 303

[Close]

BLAST of Lcy08g008770 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 208.4 bits (529), Expect = 8.5e-50
Identity = 118/296 (39.86%), Postives = 167/296 (56.42%), Query Frame = 0


Query: 2   EEARLVESLVELVHEVGWRGDNGTFRPGYLPRLKRMIKDKMPTCTIESTSVIDCKVRSLK 61
           EE + VE LVELV   GWR DNGTF+PGYL +L+RM+ +K+P   I+ +S IDC V+SLK
Sbjct: 16  EEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLK 75

Query: 62  RQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFPHYEHLAFL 121
           + Y AI+EM GP CSGFGWN+EF+CI AE++++D+W+KSH +AKGLL+K FP+Y+ L+++
Sbjct: 76  KTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYV 135

Query: 122 FAKDRASGG--------ACNVPAEQADSTHGDDEGDQNVQATQDCYVPAPPDINLAADMD 181
           F KDRA+G           NV     D+    D  D+++       V   PD       +
Sbjct: 136 FGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPD-------E 195

Query: 182 FEDVPITPTSRPNNTGSSQSRKRSRASYEAEALDIMRQSVAMQKTQFTKIADWPDAQDAQ 241
              +     S   N  S   RKR    Y  E ++++R  +     Q   IADWP  + A 
Sbjct: 196 MFGIRAGQASERRNCSSVSKRKRGSERY--ETVEVIRSVMEFGNEQLKAIADWPKEKRAM 255

Query: 242 EFKRRDTVGEMLLAQQELSDDERVALMRILFADPKMKNMMLSVPPTLRLRFLRGLL 290
           E + R  V + L    +L   +R  LM+ILF   +     LS+P  L+L +   LL
Sbjct: 256 EVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILL 302

[Close]

BLAST of Lcy08g008770 vs. NCBI nr
Match: KAA0036924.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 206.5 bits (524), Expect = 3.2e-49
Identity = 122/297 (41.08%), Postives = 168/297 (56.57%), Query Frame = 0


Query: 2   EEARLVESLVELVHEVGWRGDNGTFRPGYLPRLKRMIKDKMPTCTIESTSVIDCKVRSLK 61
           EE  LVE L+ELV   GW+ DNGTFRPGYL +L RM+ +K+P C + +T+VIDC++++LK
Sbjct: 67  EEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLK 126

Query: 62  RQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFPHYEHLAFL 121
           R + AI+EM GP CSGFGWNDE KCI AEKE++D WV+SH +AKGLLNKPFP+Y+ L ++
Sbjct: 127 RTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYV 186

Query: 122 FAKDRASGGACNVPAEQADSTHGD-----DEGDQNVQATQDCYVPAPPDINLAADMDFED 181
           F +DRA+G      A+   +  G      D GD N           PP  +   D+  +D
Sbjct: 187 FCRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNED--------FPPVYSQGVDISQDD 246

Query: 182 VPITPTSRPN--NTGSSQSRKRSRASYEAEALDIMRQSVAMQKTQFTKIADWPDAQDAQE 241
           V  +  SR +   TGSS S KR R S     L+ +  ++     Q  +IA+WP    A +
Sbjct: 247 VCASRPSRASEGRTGSSGS-KRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLAND 306

Query: 242 FKRRDTVGEMLLAQQELSDDERVALMRILFADPKMKNMMLSVPPTLRLRFLRGLLNE 292
              R     +L    EL+  +R  L R L +        + +P   R  F R LL +
Sbjct: 307 NHMRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRD 354

[Close]

BLAST of Lcy08g008770 vs. NCBI nr
Match: KAA0032766.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 206.1 bits (523), Expect = 4.2e-49
Identity = 122/297 (41.08%), Postives = 168/297 (56.57%), Query Frame = 0


Query: 2   EEARLVESLVELVHEVGWRGDNGTFRPGYLPRLKRMIKDKMPTCTIESTSVIDCKVRSLK 61
           EE  LVE L+ELV   GW+ DNGTFRPGYL +L RM+ +K+P C + +T+VIDC++++LK
Sbjct: 16  EEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLK 75

Query: 62  RQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFPHYEHLAFL 121
           R + AI+EM GP CSGFGWNDE KCI AEKE++D WV+SH +AKGLLNKPFP+Y+ L ++
Sbjct: 76  RTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYV 135

Query: 122 FAKDRASGGACNVPAEQADSTHGD-----DEGDQNVQATQDCYVPAPPDINLAADMDFED 181
           F +DRA+G      A+   +  G      D GD N           PP  +   D+  +D
Sbjct: 136 FGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNED--------FPPVYSQGVDISQDD 195

Query: 182 VPITPTSRPN--NTGSSQSRKRSRASYEAEALDIMRQSVAMQKTQFTKIADWPDAQDAQE 241
           V  +  SR +   TGSS S KR R S     L+ +  ++     Q  +IA+WP    A +
Sbjct: 196 VRASRPSRASEGRTGSSGS-KRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLAND 255

Query: 242 FKRRDTVGEMLLAQQELSDDERVALMRILFADPKMKNMMLSVPPTLRLRFLRGLLNE 292
              R     +L    EL+  +R  L R L +        + +P   R  F R LL +
Sbjct: 256 NHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRD 303

[Close]

BLAST of Lcy08g008770 vs. NCBI nr
Match: KAA0033744.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0044866.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046274.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0049705.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0057135.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 206.1 bits (523), Expect = 4.2e-49
Identity = 122/297 (41.08%), Postives = 168/297 (56.57%), Query Frame = 0


Query: 2   EEARLVESLVELVHEVGWRGDNGTFRPGYLPRLKRMIKDKMPTCTIESTSVIDCKVRSLK 61
           EE  LVE L+ELV   GW+ DNGTFRPGYL +L RM+ +K+P C + +T+VIDC++++LK
Sbjct: 16  EEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLK 75

Query: 62  RQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFPHYEHLAFL 121
           R + AI+EM GP CSGFGWNDE KCI AEKE++D WV+SH +AKGLLNKPFP+Y+ L ++
Sbjct: 76  RTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYV 135

Query: 122 FAKDRASGGACNVPAEQADSTHGD-----DEGDQNVQATQDCYVPAPPDINLAADMDFED 181
           F +DRA+G      A+   +  G      D GD N           PP  +   D+  +D
Sbjct: 136 FGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNED--------FPPVYSQGVDISQDD 195

Query: 182 VPITPTSRPN--NTGSSQSRKRSRASYEAEALDIMRQSVAMQKTQFTKIADWPDAQDAQE 241
           V  +  SR +   TGSS S KR R S     L+ +  ++     Q  +IA+WP    A +
Sbjct: 196 VRASRPSRASEGRTGSSGS-KRKRGSQRDFELEAIHLALDQTNEQLREIAEWPARNLAND 255

Query: 242 FKRRDTVGEMLLAQQELSDDERVALMRILFADPKMKNMMLSVPPTLRLRFLRGLLNE 292
              R     +L    EL+  +R  L R L +        + +P   R  F R LL +
Sbjct: 256 NHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRD 303

[Close]

BLAST of Lcy08g008770 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-07
Identity = 25/89 (28.09%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 52  VIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKP 111
           V+  + +SL+RQ++AI  +L     GF W++E + + A+  V+  ++K+H  A+  + +P
Sbjct: 236 VLKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRP 295

Query: 112 FPHYEHLAFLFAKDRASGGACNVPAEQAD 141
            P+Y+ L  L          C V  +  D
Sbjct: 296 IPYYKDLCVLCGDSGIEENECFVAMDWFD 322

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BLAST of Lcy08g008770 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-07
Identity = 25/89 (28.09%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 52  VIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKP 111
           V+  + +SL+RQ++AI  +L     GF W++E + + A+  V+  ++K+H  A+  + +P
Sbjct: 236 VLKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRP 295

Query: 112 FPHYEHLAFLFAKDRASGGACNVPAEQAD 141
            P+Y+ L  L          C V  +  D
Sbjct: 296 IPYYKDLCVLCGDSGIEENECFVAMDWFD 322

The following BLAST results are available for this feature:

BLAST of Lcy08g008770 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g008770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TN44	3.2e-50	41.41	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U0H7	4.1e-50	39.86	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B4L3	4.1e-50	39.86	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
A0A5A7T091	1.6e-49	41.08	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TRV1	2.0e-49	41.08	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lcy08g008770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044610.1	6.5e-50	41.41	retrotransposon protein [Cucumis melo var. makuwa]	[more]
XP_008441954.1	8.5e-50	39.86	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret...	[more]
KAA0036924.1	3.2e-49	41.08	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0032766.1	4.2e-49	41.08	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0033744.1	4.2e-49	41.08	retrotransposon protein [Cucumis melo var. makuwa] >KAA0044866.1 retrotransposon...	[more]

BLAST of Lcy08g008770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02210.1	1.9e-07	28.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	1.9e-07	28.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..196
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 2..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g008770.1	Lcy08g008770.1	mRNA