Homology
BLAST of Lcy08g008660 vs. ExPASy Swiss-Prot
Match:
Q8VZE4 (Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana OX=3702 GN=At4g01570 PE=2 SV=1)
HSP 1 Score: 991.5 bits (2562), Expect = 5.5e-288
Identity = 504/805 (62.61%), Postives = 624/805 (77.52%), Query Frame = 0
Query: 1 MRHGRGDFVA-----MESRATSTLSQLADLLLVASVTKTLSESGTRTLQHHSLPISEHLL 60
MRHGRG V+ + S QL ++LLVAS++KTLS+SGTR+L +S+PISE ++
Sbjct: 1 MRHGRGSAVSAAISGLSPAKNSPFPQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVV 60
Query: 61 LQILHSRSVHPSKKLDFFKWC-SLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKR 120
LQIL S+ PSKKLDFF+WC SL P Y HSA+ YSQIF +CR+G L EVP LL SMK
Sbjct: 61 LQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKE 120
Query: 121 DGVAVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGL 180
DGV +D K+LLD+ IRSGKF++AL +LD+MEELG L + Y+SVL+ALVKK+++ L
Sbjct: 121 DGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRL 180
Query: 181 ALSIFLKLFDAFSNGGQEGTAAASF-AFLPNALACNELLVALRKSDMRIEFKKVFDKLRA 240
ALSI KL +A N + T ++LP +A NELLV LR++DMR EFK+VF+KL+
Sbjct: 181 ALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKG 240
Query: 241 IKGFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLV-SESFGPDLCTYNSLIHVLC 300
+K F+F+ YNICIH FGCWG LD +L+LFKEMK++S V SFGPD+CTYNSLIHVLC
Sbjct: 241 MKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLC 300
Query: 301 LVGKVKDAVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTI 360
L GK KDA+IVW+ELK SGHEPD TYR++IQGCCKSYRMDDA I+ EM+YNGF PDTI
Sbjct: 301 LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTI 360
Query: 361 VYNSLLDGLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDL 420
VYN LLDG KARKV EACQLF+KMVQEGVRAS WTYNILIDGLFRNGRA A ++LFCDL
Sbjct: 361 VYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420
Query: 421 KKKGQFVDGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRW 480
KKKGQFVD +T+SI+ LQLC+EG LE A++LVEEME RGF VDLVT++SLLI HKQGRW
Sbjct: 421 KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRW 480
Query: 481 DGLERLMKHIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASS 540
D E+LMKHIREG+LVP+VL+W A +E S+K Q+K KD + +F KG +I+S S
Sbjct: 481 DWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSE 540
Query: 541 VMKVDIKDIFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSF 600
D E+ + D WSSSP+ D LA+ F + +G+RV+AK +SF
Sbjct: 541 ----DDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPL---FGLARGQRVEAK-PDSF 600
Query: 601 DIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPV-RYTYNSMLSSFVKKGYFHQAWGI 660
D+DM+NTFLSI+L+KG LSLACKLFEIF+ MGV + YTYNSM+SSFVKKGYF A G+
Sbjct: 601 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 660
Query: 661 FNEMGEKVCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGK 720
++M E C AD+ATYNVIIQGLGKMGRADLAS+VLD+L +QGGYLDIVMYNTLINALGK
Sbjct: 661 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 720
Query: 721 AGRMDDVNKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVT 780
A R+D+ +LF+ M+S+GINPDVV++NT+IEV+SKAG+ K+AYK+LK MLD+GC PN+VT
Sbjct: 721 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 780
Query: 781 DTTLDFLGREIEKVRYDKASIIRDK 797
DT LD+LG+E+EK R+ KAS +R+K
Sbjct: 781 DTILDYLGKEMEKARFKKASFVRNK 797
BLAST of Lcy08g008660 vs. ExPASy Swiss-Prot
Match:
Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)
HSP 1 Score: 219.2 bits (557), Expect = 1.7e-55
Identity = 179/690 (25.94%), Postives = 308/690 (44.64%), Query Frame = 0
Query: 102 LHEVPILLSSMKRDGVAVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNS 161
L V S M++DG D TF +L+DA ++G F A + LD M + G L+TYN+
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 162 VLVALVKKNQVGLALSIFLKLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMR 221
++ L++ +++ AL +F G E S P A + KS
Sbjct: 404 LICGLLRVHRLDDALELF---------GNME-----SLGVKPTAYTYIVFIDYYGKSGDS 463
Query: 222 IEFKKVFDKLRAIKGFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDL 281
+ + F+K++ KG N+ N +++ G + +F +K LV PD
Sbjct: 464 VSALETFEKMKT-KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV-----PDS 523
Query: 282 CTYNSLIHVLCLVGKVKDAVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNE 341
TYN ++ VG++ +A+ + E+ +G EPD +I K+ R+D+A +F
Sbjct: 524 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 583
Query: 342 MEYNGFTPDTIVYNSLLDGLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGR 401
M+ P + YN+LL GL K K+ EA +LF+ MVQ+G + T+N L D L +N
Sbjct: 584 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 643
Query: 402 AAASYSLFCDLKKKGQFVDGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTS 461
+ + + G D TY+ I+ L K G ++EA+ +M+ + D VT+ +
Sbjct: 644 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCT 703
Query: 462 LLIAMHKQGRWDGLERLMKHIREG-----------DLVPSVLKWKANMEDSMKYQQNK-- 521
LL + K + +++ + DL+ S+L +A +++++ + +
Sbjct: 704 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILA-EAGIDNAVSFSERLVA 763
Query: 522 ---RKDNSSLFSPKGDLSEIISSRASSVMKVDIKDIFEKTEEKDADNWSSSPHADLLANL 581
+D S+ P II + +FEK KD P +LL
Sbjct: 764 NGICRDGDSILVP------IIRYSCKHNNVSGARTLFEKF-TKDLGVQPKLPTYNLLIGG 823
Query: 582 AKSTSHYLQPFSVGQGRRVQAKGTNSF-DIDMVNTFLSIFLAKGKLSLACKLFEIFSDMG 641
+ Q +Q K T D+ N L + GK+ +LFE++ +M
Sbjct: 824 LLEA----DMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID---ELFELYKEMS 883
Query: 642 VNPVR---YTYNSMLSSFVKKGYFHQAWGIFNE-MGEKVCPADVATYNVIIQGLGKMGRA 701
+ T+N ++S VK G A ++ + M ++ TY +I GL K GR
Sbjct: 884 THECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL 943
Query: 702 DLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFEQMRSSGINPDVVTFNTL 761
A + + +++ G + +YN LIN GKAG D LF++M G+ PD+ T++ L
Sbjct: 944 YEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 997
Query: 762 IEVHSKAGRFKDAYKFLKMMLDSGCSPNYV 771
++ GR + + K + +SG +P+ V
Sbjct: 1004 VDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
BLAST of Lcy08g008660 vs. ExPASy Swiss-Prot
Match:
Q9M907 (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)
HSP 1 Score: 218.4 bits (555), Expect = 2.9e-55
Identity = 169/723 (23.37%), Postives = 328/723 (45.37%), Query Frame = 0
Query: 67 SKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDGVAVDSHTFKV 126
++ +++F+W H +Y+ + ++ R + +L M G +T
Sbjct: 79 NRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIE 138
Query: 127 LLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLALSIFLKLFDAF 186
++ +++ K +++ M + + Y +++ A N + L++F ++
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM---- 198
Query: 187 SNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKGFEFNVCGYNI 246
+ P L+ K + D++++ + ++ YN+
Sbjct: 199 ----------QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS-SSLDADIVLYNV 258
Query: 247 CIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVKDAVIVWEE 306
CI +FG G +D + F E++ L PD TY S+I VLC ++ +AV ++E
Sbjct: 259 CIDSFGKVGKVDMAWKFFHEIEANGL-----KPDEVTYTSMIGVLCKANRLDEAVEMFEH 318
Query: 307 LKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLLDGLFKARK 366
L+ + P + Y +I G + + D+A + G P I YN +L L K K
Sbjct: 319 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 378
Query: 367 VIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVTYSI 426
V EA ++F++M ++ + TYNILID L R G+ ++ L ++K G F + T +I
Sbjct: 379 VDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 438
Query: 427 IVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERLMKHIREGD 486
+V +LCK L+EA + EEM+ + D +T SL+ + K GR D ++ + + + D
Sbjct: 439 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 498
Query: 487 LVPSVLKWKANMEDSMKYQQNKRKDNSSLFSP------KGDLSEIISSRASSVMKVDIKD 546
+ + + + +++ + +++D ++ DL +++++ + K +
Sbjct: 499 CRTNSIVYTSLIKNF--FNHGRKEDGHKIYKDMINQNCSPDL-QLLNTYMDCMFKAGEPE 558
Query: 547 ----IFEKTEEK----DADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSF 606
+FE+ + + DA ++S H + A A T Y +S+ + V
Sbjct: 559 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET--YELFYSMKEQGCV-------L 618
Query: 607 DIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIF 666
D N + F GK++ A +L E G P TY S++ K +A+ +F
Sbjct: 619 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 678
Query: 667 NEMGEKVCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKA 726
E K +V Y+ +I G GK+GR D A +L++LM++G ++ +N+L++AL KA
Sbjct: 679 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 738
Query: 727 GRMDDVNKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTD 776
+++ F+ M+ P+ VT+ LI K +F A+ F + M G P+ ++
Sbjct: 739 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 768
BLAST of Lcy08g008660 vs. ExPASy Swiss-Prot
Match:
Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)
HSP 1 Score: 209.1 bits (531), Expect = 1.8e-52
Identity = 169/724 (23.34%), Postives = 312/724 (43.09%), Query Frame = 0
Query: 55 LLQILHSRSVHPSKKLDF----FKWCSLSPNYNH--SASTYSQIFHILCRSGYLHEVPIL 114
LL L H KK D F W +Y S + I +L + G + +
Sbjct: 138 LLAFLKGLGFH--KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANM 197
Query: 115 LSSMKRDGVAVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVK 174
+ ++ DG ++D +++ L+ AF SG++ A+ + MEE G L TYN +L K
Sbjct: 198 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 257
Query: 175 KNQVGLALSIFLKLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVF 234
+G + L + + G P+A N L+ ++ + E +VF
Sbjct: 258 ---MGTPWNKITSLVEKMKSDG----------IAPDAYTYNTLITCCKRGSLHQEAAQVF 317
Query: 235 DKLRAIKGFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLI 294
++++A GF ++ YN + +G ++ + EM V F P + TYNSLI
Sbjct: 318 EEMKA-AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM-----VLNGFSPSIVTYNSLI 377
Query: 295 HVLCLVGKVKDAVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFT 354
G + +A+ + ++ G +PD FTY ++ G ++ +++ A IF EM G
Sbjct: 378 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 437
Query: 355 PDTIVYNSLLDGLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSL 414
P+ +N+ + K E ++FD++ G+ T+N L+ +NG + +
Sbjct: 438 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 497
Query: 415 FCDLKKKGQFVDGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHK 474
F ++K+ G + T++ ++ + G E+A+ + M G DL T ++L A+ +
Sbjct: 498 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 557
Query: 475 QGRWDGLERLMKHIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISS 534
G W+ E+++ + +G P+ L + SL + EI
Sbjct: 558 GGMWEQSEKVLAEMEDGRCKPNELTY------------------CSLLHAYANGKEI--- 617
Query: 535 RASSVMKVDIKDIFEKTEEKDADNWSSSPHADLLANLAKST-SHYLQPFSVGQGRRVQAK 594
L+ +LA+ S ++P +V
Sbjct: 618 -------------------------------GLMHSLAEEVYSGVIEPRAV--------- 677
Query: 595 GTNSFDIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQ 654
++ T + + L A + F + G +P T NSM+S + ++ +
Sbjct: 678 --------LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 737
Query: 655 AWGIFNEMGEKVCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLIN 714
A G+ + M E+ +ATYN ++ + + +L +++ +G DI+ YNT+I
Sbjct: 738 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 771
Query: 715 ALGKAGRMDDVNKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSP 772
A + RM D +++F +MR+SGI PDV+T+NT I ++ F++A ++ M+ GC P
Sbjct: 798 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRP 771
BLAST of Lcy08g008660 vs. ExPASy Swiss-Prot
Match:
Q9SXD8 (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX=3702 GN=At1g62590 PE=2 SV=1)
HSP 1 Score: 200.3 bits (508), Expect = 8.3e-50
Identity = 137/537 (25.51%), Postives = 251/537 (46.74%), Query Frame = 0
Query: 240 NVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVKD 299
++ +N + A D ++L ++M++ +V L TYN LI+ C ++
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-----GLYTYNILINCFCRRSQISL 143
Query: 300 AVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLLD 359
A+ + ++ G+EP T ++ G C R+ DA + ++M G+ PDTI + +L+
Sbjct: 144 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 203
Query: 360 GLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFV 419
GLF K EA L D+MVQ G + + TY ++++GL + G + +L ++
Sbjct: 204 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 263
Query: 420 DGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERLM 479
D V ++ I+ LCK +++AL L +EME +G ++VT +SL+ + GRW +L+
Sbjct: 264 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 323
Query: 480 KHIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKVDIK 539
+ E + P+++ + A ++ +K + K + L+
Sbjct: 324 SDMIEKKINPNLVTFNALIDAFVK--EGKFVEAEKLYD---------------------- 383
Query: 540 DIFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSF-DIDMVN 599
D+ +++ + D ++S + + + + F V + + F D+ N
Sbjct: 384 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSK---------DCFPDVVTYN 443
Query: 600 TFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEK 659
T + F ++ +LF S G+ TY +++ G A +F +M
Sbjct: 444 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 503
Query: 660 VCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDV 719
P D+ TY++++ GL G+ + A V D + + LDI +Y T+I + KAG++DD
Sbjct: 504 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 563
Query: 720 NKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTL 776
LF + G+ P+VVT+NT+I ++AY LK M + G PN T TL
Sbjct: 564 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
BLAST of Lcy08g008660 vs. ExPASy TrEMBL
Match:
A0A6J1EPT7 (pentatricopeptide repeat-containing protein At4g01570 OS=Cucurbita moschata OX=3662 GN=LOC111436296 PE=4 SV=1)
HSP 1 Score: 1440.2 bits (3727), Expect = 0.0e+00
Identity = 719/799 (89.99%), Postives = 755/799 (94.49%), Query Frame = 0
Query: 1 MRHGRGDFVAMESRATSTLSQLADLLLVASVTKTLSESGTRTLQHHSLPISEHLLLQILH 60
MRHG G FVAMESRAT TLS+LADLLLVAS+TKTLSESGTRTLQH SL ISE LLLQIL
Sbjct: 1 MRHGIGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILR 60
Query: 61 SRSVHPSKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDGVAVD 120
SRSVHPS KLDFFKWCSLSPN++HS STYSQIF ILCRSGYLHEVP+LLSSMKRDGV VD
Sbjct: 61 SRSVHPSNKLDFFKWCSLSPNFSHSPSTYSQIFRILCRSGYLHEVPLLLSSMKRDGVDVD 120
Query: 121 SHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLALSIFL 180
SHTFKVLLDAFIRSGKFD AL+ILDHMEELGTSLELNTYNSVLVALV+KNQVGLALSIF
Sbjct: 121 SHTFKVLLDAFIRSGKFDDALDILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFF 180
Query: 181 KLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKGFEFN 240
KLFDAFS GGQEG+A SF+FLPNALACNELLVALRKSDMR+EFKKVFDKLR I+ FEFN
Sbjct: 181 KLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKKVFDKLRTIRSFEFN 240
Query: 241 VCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVKDA 300
VCGYNICIHAFGCWGYLDTSLALFKEMKQ+SLVS SF PDLCTYNSLIHVLCLVGKV DA
Sbjct: 241 VCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFSPDLCTYNSLIHVLCLVGKVNDA 300
Query: 301 VIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLLDG 360
+IVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF PDTIVYNSLLDG
Sbjct: 301 LIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPDTIVYNSLLDG 360
Query: 361 LFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVD 420
LFKAR+V+EACQ FDKMVQEGVRASPWTYNILIDGLFRNGRA ASY+LFCDLKKKGQFVD
Sbjct: 361 LFKARRVVEACQFFDKMVQEGVRASPWTYNILIDGLFRNGRAEASYTLFCDLKKKGQFVD 420
Query: 421 GVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERLMK 480
GVTYSII+LQLCKEGLLEEALQLVEEMEARGF++DLVTVTSLLIAMHKQG+W+GLERLMK
Sbjct: 421 GVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMHKQGQWEGLERLMK 480
Query: 481 HIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKVDIKD 540
HIREGDLVP+VLKWKANMEDS+KYQ+NKRKD S LFSPK DLSEIISSRASSV KVD D
Sbjct: 481 HIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRASSVAKVD--D 540
Query: 541 IFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSFDIDMVNTF 600
I E TEEKD DNWSSSPH DLLANLAKST LQPFS+ G+RVQAKG NSFDIDMVNTF
Sbjct: 541 ISENTEEKDDDNWSSSPHVDLLANLAKSTGDSLQPFSLSPGQRVQAKGDNSFDIDMVNTF 600
Query: 601 LSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVC 660
LSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLS+FVKKGYF QAWGIFNEMGEKVC
Sbjct: 601 LSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSAFVKKGYFEQAWGIFNEMGEKVC 660
Query: 661 PADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDVNK 720
PAD+ATYNVIIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTL+NALGKAGRMDDVNK
Sbjct: 661 PADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNK 720
Query: 721 LFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTLDFLGR 780
LFEQMRSSGINPDVV+FNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPN+VTDT LDFLGR
Sbjct: 721 LFEQMRSSGINPDVVSFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTILDFLGR 780
Query: 781 EIEKVRYDKASIIRDKNSS 800
EIEK RY+KASI+R+KNSS
Sbjct: 781 EIEKARYEKASIMREKNSS 797
BLAST of Lcy08g008660 vs. ExPASy TrEMBL
Match:
A0A6J1C0Z4 (pentatricopeptide repeat-containing protein At4g01570 OS=Momordica charantia OX=3673 GN=LOC111007043 PE=4 SV=1)
HSP 1 Score: 1433.7 bits (3710), Expect = 0.0e+00
Identity = 713/800 (89.12%), Postives = 758/800 (94.75%), Query Frame = 0
Query: 1 MRHGRGDFVAMESRATSTLSQLADLLLVASVTKTLSESGTRTLQH--HSLPISEHLLLQI 60
MRHGR FVAMESRA S+LSQ+ADLLLVAS+TKTLSESGTRTLQH HSLP+SE LLLQI
Sbjct: 1 MRHGRRGFVAMESRAMSSLSQMADLLLVASLTKTLSESGTRTLQHHSHSLPLSEPLLLQI 60
Query: 61 LHSRSVHPSKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDGVA 120
L SRS+HPSKKL+FF WCSLSPNY HSASTYS+I HILCR+GYLHEVP+LLSSMKRDGVA
Sbjct: 61 LRSRSLHPSKKLEFFTWCSLSPNYKHSASTYSRILHILCRAGYLHEVPLLLSSMKRDGVA 120
Query: 121 VDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLALSI 180
VDSHTFK+LLDAFI SGKFDAALEILDHMEELGT LEL+TYNS+L+ALV+KNQVGLALSI
Sbjct: 121 VDSHTFKLLLDAFIGSGKFDAALEILDHMEELGTGLELHTYNSLLLALVRKNQVGLALSI 180
Query: 181 FLKLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKGFE 240
FLKLFDAF NGG GT A S +FLP++LACNELLVALR++DMRIEFKKVFDKLR I+GFE
Sbjct: 181 FLKLFDAFYNGGHVGTVADSISFLPSSLACNELLVALRRADMRIEFKKVFDKLREIRGFE 240
Query: 241 FNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVK 300
FN+CGYNICIHAFGCWGYLDTSLALFKEMKQKS VS+SFGPDLCTYNSLIHVLCLVG+VK
Sbjct: 241 FNICGYNICIHAFGCWGYLDTSLALFKEMKQKSSVSQSFGPDLCTYNSLIHVLCLVGRVK 300
Query: 301 DAVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLL 360
DA+IVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDATMIFNEMEYNGFT DTIVYNSLL
Sbjct: 301 DALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATMIFNEMEYNGFTLDTIVYNSLL 360
Query: 361 DGLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQF 420
DGLFKARKV+E CQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAA YSLFCDLKKKGQF
Sbjct: 361 DGLFKARKVVEGCQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAAGYSLFCDLKKKGQF 420
Query: 421 VDGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERL 480
VDGVTYSI+VLQLCKEGLLEEA+Q VEEME RGFIVDL+TV+SLLI MHKQGRWDGLERL
Sbjct: 421 VDGVTYSIVVLQLCKEGLLEEAIQSVEEMEVRGFIVDLITVSSLLIGMHKQGRWDGLERL 480
Query: 481 MKHIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKVDI 540
MKHIREGDLVP+VLKWKANMEDS+KYQQNKRKD S+LFSPK DL+EIISSRASSVMKVDI
Sbjct: 481 MKHIREGDLVPNVLKWKANMEDSVKYQQNKRKDYSTLFSPKEDLNEIISSRASSVMKVDI 540
Query: 541 KDIFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSFDIDMVN 600
IF TEE NWS SPH DLLANLA+STSH QPFS+ QGRRVQAKG NSFDIDMVN
Sbjct: 541 NGIFINTEE----NWSESPHVDLLANLARSTSHSSQPFSLAQGRRVQAKGANSFDIDMVN 600
Query: 601 TFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEK 660
TFLSIFLAKGKLSLACKLFEIFSDMGV+PVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEK
Sbjct: 601 TFLSIFLAKGKLSLACKLFEIFSDMGVSPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEK 660
Query: 661 VCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDV 720
VCPAD+ATYN+IIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMD+V
Sbjct: 661 VCPADIATYNMIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEV 720
Query: 721 NKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTLDFL 780
NKLF+QMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGC+PN+VTDTTLDFL
Sbjct: 721 NKLFQQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCAPNHVTDTTLDFL 780
Query: 781 GREIEKVRYDKASIIRDKNS 799
GREIEK+RY+KASIIRDKNS
Sbjct: 781 GREIEKMRYEKASIIRDKNS 796
BLAST of Lcy08g008660 vs. ExPASy TrEMBL
Match:
A0A6J1JWP1 (pentatricopeptide repeat-containing protein At4g01570 OS=Cucurbita maxima OX=3661 GN=LOC111488557 PE=4 SV=1)
HSP 1 Score: 1433.7 bits (3710), Expect = 0.0e+00
Identity = 712/799 (89.11%), Postives = 755/799 (94.49%), Query Frame = 0
Query: 1 MRHGRGDFVAMESRATSTLSQLADLLLVASVTKTLSESGTRTLQHHSLPISEHLLLQILH 60
MRHG G FVAMESRAT TLS+LADLLLVAS+TKTLSESGTRTLQH SL ISE LLLQIL
Sbjct: 1 MRHGIGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILR 60
Query: 61 SRSVHPSKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDGVAVD 120
SRSVHPS KLDFFKWCSLSPN++HSASTYSQIF ILCRSGY HEVP+LLSSMKRDGV VD
Sbjct: 61 SRSVHPSNKLDFFKWCSLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDGVDVD 120
Query: 121 SHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLALSIFL 180
SHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALV+KNQVGLALSIF
Sbjct: 121 SHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFF 180
Query: 181 KLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKGFEFN 240
KLFDAFS GGQEG+A SF+FLPNALACNELLVALRKSDMR+EFK VFDKLR I+ FEFN
Sbjct: 181 KLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRSFEFN 240
Query: 241 VCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVKDA 300
VCGYNICIHAFGCWGYLDTSLALFKEMKQ+SLVS SFGPDLCTYNSLIHVLCLVGKV DA
Sbjct: 241 VCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVNDA 300
Query: 301 VIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLLDG 360
+IVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF P+TIVYNSLLDG
Sbjct: 301 LIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLLDG 360
Query: 361 LFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVD 420
LFKAR+V+EACQ FDKMVQ+GVRASPWTYNILIDGLFRNGRA ASYSLFCDLKKKGQFVD
Sbjct: 361 LFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFVD 420
Query: 421 GVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERLMK 480
GVTYSII+LQLCKEGLLEEALQLVEEMEARGF++DLVTVTSLLIAM+KQG+W+GLERLMK
Sbjct: 421 GVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERLMK 480
Query: 481 HIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKVDIKD 540
HIREGDLVP+VLKWKANMEDS+KYQ+NKRKD S LFSPK DLSEIISSRA+SV KV++ D
Sbjct: 481 HIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVNVDD 540
Query: 541 IFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSFDIDMVNTF 600
I E TEEKD DNWSSSPH DLLAN AKST LQ FS+ G+RVQ+KG NSFDIDMVNTF
Sbjct: 541 ISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTF 600
Query: 601 LSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVC 660
LSIFLAKGKLSLACKLF+IFSDMGVNPVRYTYNSMLS+FVKKGYFHQAWGIFNEMGEKVC
Sbjct: 601 LSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVC 660
Query: 661 PADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDVNK 720
PAD+ATYN+IIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTL+NALGKAGRMDDVNK
Sbjct: 661 PADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNK 720
Query: 721 LFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTLDFLGR 780
LFEQMRSSGI PDVV+FNTLIEVHSKAGRFKDAYK+LKMMLDSGCSPN+VTDT LDFLGR
Sbjct: 721 LFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILDFLGR 780
Query: 781 EIEKVRYDKASIIRDKNSS 800
EIEK RY+KASI+RDKNSS
Sbjct: 781 EIEKARYEKASIMRDKNSS 799
BLAST of Lcy08g008660 vs. ExPASy TrEMBL
Match:
A0A5A7TE47 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002570 PE=4 SV=1)
HSP 1 Score: 1395.6 bits (3611), Expect = 0.0e+00
Identity = 692/803 (86.18%), Postives = 747/803 (93.03%), Query Frame = 0
Query: 1 MRHG--RGDFVAME--SRATSTLSQLADLLLVASVTKTLSESGTRTLQHHSLPISEHLLL 60
MRHG R F+ +E SR STLSQL+DLLLVAS+TKTLSESGTRTLQHHSLPIS LLL
Sbjct: 1 MRHGRTRACFLCIESHSRTVSTLSQLSDLLLVASITKTLSESGTRTLQHHSLPISHPLLL 60
Query: 61 QILHSRSVHPSKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDG 120
QILHSRS++PS KLDFFKWCSL+PN+NHS STYSQIFHILCRSGYLHEVP LL SMKRDG
Sbjct: 61 QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG 120
Query: 121 VAVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLAL 180
V+VDSHTFKVLLDAFIRSGK+DAALEILDHME+LGTSLELNTYNSVLVAL++KNQVGLAL
Sbjct: 121 VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL 180
Query: 181 SIFLKLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKG 240
SIF KLFD +NGGQ+ +AA SF FLPN+LACNELLVALRK DMR+EF+KVFDKLRAI+
Sbjct: 181 SIFFKLFDGLNNGGQDDSAATSFHFLPNSLACNELLVALRKLDMRVEFRKVFDKLRAIEA 240
Query: 241 FEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGK 300
FEFNVCGYNICI+AFGCWGYLDT+L+LFKEMK+KSLV SFGPDLCTYNS+I VLCLVGK
Sbjct: 241 FEFNVCGYNICIYAFGCWGYLDTALSLFKEMKEKSLVLGSFGPDLCTYNSIIRVLCLVGK 300
Query: 301 VKDAVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNS 360
VKDA+IVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDATMIFNEMEYNG PD IVYNS
Sbjct: 301 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSYRMDDATMIFNEMEYNGLIPDIIVYNS 360
Query: 361 LLDGLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKG 420
LL+GLFKARKV EACQLFDKMVQE VRASPWTYNILIDGLFRNGRA A Y+LFCDLKKKG
Sbjct: 361 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 420
Query: 421 QFVDGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLE 480
QFVDGVTYSII+LQLCKEGLLEEALQLVEEMEARGF+VDL+T+TSLLIAMHKQG+W+GLE
Sbjct: 421 QFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWEGLE 480
Query: 481 RLMKHIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKV 540
RLMKHIREGDLVP+VLKWK NMEDS+KYQ+NKR+D SSLFSPK DL E+ISSRASS +V
Sbjct: 481 RLMKHIREGDLVPNVLKWKINMEDSIKYQKNKREDFSSLFSPKEDLIEVISSRASSAAEV 540
Query: 541 DIKDIFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSFDIDM 600
+I + E TEE D D WSSSPH D LANLA ST+ LQPFS+ QGRR+Q KG NSFDI+M
Sbjct: 541 NIDNSVENTEEMDTDGWSSSPHVDGLANLANSTTDILQPFSLRQGRRIQEKGNNSFDINM 600
Query: 601 VNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMG 660
VNTFLSIFLAKGKL+LACKLFEIFSDMGVNPV+YTYNSMLSSFVKKGYFHQAWGIFNEMG
Sbjct: 601 VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660
Query: 661 EKVCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMD 720
E VCPAD+ATYNVIIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTLINALGKAGRMD
Sbjct: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720
Query: 721 DVNKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTLD 780
DVNKLF+QMR+SGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPN+VTDTTLD
Sbjct: 721 DVNKLFDQMRNSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTTLD 780
Query: 781 FLGREIEKVRYDKASIIRDKNSS 800
FLGREIEK RY+KASIIRDKNSS
Sbjct: 781 FLGREIEKARYEKASIIRDKNSS 803
BLAST of Lcy08g008660 vs. ExPASy TrEMBL
Match:
A0A1S3CBH7 (pentatricopeptide repeat-containing protein At4g01570 OS=Cucumis melo OX=3656 GN=LOC103498827 PE=4 SV=1)
HSP 1 Score: 1395.6 bits (3611), Expect = 0.0e+00
Identity = 692/803 (86.18%), Postives = 747/803 (93.03%), Query Frame = 0
Query: 1 MRHG--RGDFVAME--SRATSTLSQLADLLLVASVTKTLSESGTRTLQHHSLPISEHLLL 60
MRHG R F+ +E SR STLSQL+DLLLVAS+TKTLSESGTRTLQHHSLPIS LLL
Sbjct: 1 MRHGRTRACFLCIESHSRTVSTLSQLSDLLLVASITKTLSESGTRTLQHHSLPISHPLLL 60
Query: 61 QILHSRSVHPSKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDG 120
QILHSRS++PS KLDFFKWCSL+PN+NHS STYSQIFHILCRSGYLHEVP LL SMKRDG
Sbjct: 61 QILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDG 120
Query: 121 VAVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLAL 180
V+VDSHTFKVLLDAFIRSGK+DAALEILDHME+LGTSLELNTYNSVLVAL++KNQVGLAL
Sbjct: 121 VSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNSVLVALLRKNQVGLAL 180
Query: 181 SIFLKLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKG 240
SIF KLFD +NGGQ+ +AA SF FLPN+LACNELLVALRK DMR+EF+KVFDKLRAI+
Sbjct: 181 SIFFKLFDGLNNGGQDDSAATSFHFLPNSLACNELLVALRKLDMRVEFRKVFDKLRAIEA 240
Query: 241 FEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGK 300
FEFNVCGYNICI+AFGCWGYLDT+L+LFKEMK+KSLV SFGPDLCTYNS+I VLCLVGK
Sbjct: 241 FEFNVCGYNICIYAFGCWGYLDTALSLFKEMKEKSLVLGSFGPDLCTYNSIIRVLCLVGK 300
Query: 301 VKDAVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNS 360
VKDA+IVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDATMIFNEMEYNG PD IVYNS
Sbjct: 301 VKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSYRMDDATMIFNEMEYNGLIPDIIVYNS 360
Query: 361 LLDGLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKG 420
LL+GLFKARKV EACQLFDKMVQE VRASPWTYNILIDGLFRNGRA A Y+LFCDLKKKG
Sbjct: 361 LLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKG 420
Query: 421 QFVDGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLE 480
QFVDGVTYSII+LQLCKEGLLEEALQLVEEMEARGF+VDL+T+TSLLIAMHKQG+W+GLE
Sbjct: 421 QFVDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWEGLE 480
Query: 481 RLMKHIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKV 540
RLMKHIREGDLVP+VLKWK NMEDS+KYQ+NKR+D SSLFSPK DL E+ISSRASS +V
Sbjct: 481 RLMKHIREGDLVPNVLKWKINMEDSIKYQKNKREDFSSLFSPKEDLIEVISSRASSAAEV 540
Query: 541 DIKDIFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSFDIDM 600
+I + E TEE D D WSSSPH D LANLA ST+ LQPFS+ QGRR+Q KG NSFDI+M
Sbjct: 541 NIDNSVENTEEMDTDGWSSSPHVDGLANLANSTTDILQPFSLRQGRRIQEKGNNSFDINM 600
Query: 601 VNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMG 660
VNTFLSIFLAKGKL+LACKLFEIFSDMGVNPV+YTYNSMLSSFVKKGYFHQAWGIFNEMG
Sbjct: 601 VNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660
Query: 661 EKVCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMD 720
E VCPAD+ATYNVIIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTLINALGKAGRMD
Sbjct: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720
Query: 721 DVNKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTLD 780
DVNKLF+QMR+SGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPN+VTDTTLD
Sbjct: 721 DVNKLFDQMRNSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTTLD 780
Query: 781 FLGREIEKVRYDKASIIRDKNSS 800
FLGREIEK RY+KASIIRDKNSS
Sbjct: 781 FLGREIEKARYEKASIIRDKNSS 803
BLAST of Lcy08g008660 vs. NCBI nr
Match:
XP_023549441.1 (pentatricopeptide repeat-containing protein At4g01570 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1450.3 bits (3753), Expect = 0.0e+00
Identity = 722/799 (90.36%), Postives = 759/799 (94.99%), Query Frame = 0
Query: 1 MRHGRGDFVAMESRATSTLSQLADLLLVASVTKTLSESGTRTLQHHSLPISEHLLLQILH 60
MRH G FVAMESRAT TLS+LADLLLVAS+TKTLSESGTRTLQH SL ISE LLLQIL
Sbjct: 1 MRHRIGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILR 60
Query: 61 SRSVHPSKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDGVAVD 120
SRSVHPS KLDFFKWCSLSPN++HSASTYSQIF LCRSGYLHEVP++LSSMKRDGV VD
Sbjct: 61 SRSVHPSNKLDFFKWCSLSPNFSHSASTYSQIFRTLCRSGYLHEVPLVLSSMKRDGVDVD 120
Query: 121 SHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLALSIFL 180
SHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALV+KNQVGLALSIF
Sbjct: 121 SHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFF 180
Query: 181 KLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKGFEFN 240
KLFDAFS GGQEG+A SF+FLPNALACNELLVALRKSDMR+EFKKVFDKLR I+ FEFN
Sbjct: 181 KLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKKVFDKLRTIRSFEFN 240
Query: 241 VCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVKDA 300
VCGYNICIHAFGCWGYLDTSLALFKEMKQ+SLVS SFGPDLCTYNSLIHVLCLVGKV DA
Sbjct: 241 VCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVNDA 300
Query: 301 VIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLLDG 360
+IVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF PDTIVYNSLLDG
Sbjct: 301 LIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPDTIVYNSLLDG 360
Query: 361 LFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVD 420
LFKAR+VIEACQ FDKMVQEGVRASPWTYNILIDGLFRNGRA ASYSLFCDLKKKGQFVD
Sbjct: 361 LFKARRVIEACQFFDKMVQEGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFVD 420
Query: 421 GVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERLMK 480
GVTYSII+LQLCKEGLLEEALQLVEEMEARGF++DLVTVTSLLIAMHKQG+W+GLERLMK
Sbjct: 421 GVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMHKQGQWEGLERLMK 480
Query: 481 HIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKVDIKD 540
HIREGDLVP+VLKWKANMEDS+KYQ+NKRK+ SSLFSPK DLSEIISSRASSV KV++ D
Sbjct: 481 HIREGDLVPNVLKWKANMEDSVKYQKNKRKNYSSLFSPKEDLSEIISSRASSVAKVNVGD 540
Query: 541 IFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSFDIDMVNTF 600
I E TEEKD DNWSSSPH DLLANLAKST LQPFS+ G+RV+AKG NSFDIDMVNTF
Sbjct: 541 ISENTEEKDDDNWSSSPHVDLLANLAKSTGDSLQPFSLSPGQRVEAKGDNSFDIDMVNTF 600
Query: 601 LSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVC 660
LSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLS+FVKKGYFHQAWGIFNEMGEKVC
Sbjct: 601 LSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVC 660
Query: 661 PADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDVNK 720
PAD+ATYN+IIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTL+NALGKAGRMDDVNK
Sbjct: 661 PADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNK 720
Query: 721 LFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTLDFLGR 780
LFEQMRSSGINPDVV+FNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPN+VTDT LDFLGR
Sbjct: 721 LFEQMRSSGINPDVVSFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTILDFLGR 780
Query: 781 EIEKVRYDKASIIRDKNSS 800
EIEK RY+KASIIRDKNSS
Sbjct: 781 EIEKARYEKASIIRDKNSS 799
BLAST of Lcy08g008660 vs. NCBI nr
Match:
KAG7013843.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1444.5 bits (3738), Expect = 0.0e+00
Identity = 721/801 (90.01%), Postives = 758/801 (94.63%), Query Frame = 0
Query: 1 MRHGRGDFVAMESRATSTLSQLADLLLVASVTKTLSESGTRTLQHHSLPISEHLLLQILH 60
MRHG G FVAMESRAT TLS+LADLLLVAS+TKTLSESGTRTLQH SL ISE LLLQIL
Sbjct: 1 MRHGIGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILR 60
Query: 61 SRSVHPSKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDG--VA 120
SRSVHPS KLDFFKWCSLSPN++HS STYSQIF ILCRSGYLHEVP+LLSSMKRDG V
Sbjct: 61 SRSVHPSNKLDFFKWCSLSPNFSHSPSTYSQIFRILCRSGYLHEVPLLLSSMKRDGVDVD 120
Query: 121 VDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLALSI 180
VDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALV+KNQVGLALSI
Sbjct: 121 VDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSI 180
Query: 181 FLKLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKGFE 240
F KLFDAFS GGQEG+A SF+FLPNALACNELLVALRKSDMR EFKKVFDKLR I+ FE
Sbjct: 181 FFKLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRFEFKKVFDKLRTIRSFE 240
Query: 241 FNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVK 300
FNVCGYNICIHAFGCWGYLDTSLALFKEMKQ+SLVS SFGPDLCTYNSLIHVLCLVGKV
Sbjct: 241 FNVCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVN 300
Query: 301 DAVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLL 360
DA+IVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF PDTIVYNSLL
Sbjct: 301 DALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPDTIVYNSLL 360
Query: 361 DGLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQF 420
DGLFKAR+VIEACQ FDKMVQEGVRASPWTYNILIDGLFRNGRA ASY+LFCDLKKKGQF
Sbjct: 361 DGLFKARRVIEACQFFDKMVQEGVRASPWTYNILIDGLFRNGRAEASYTLFCDLKKKGQF 420
Query: 421 VDGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERL 480
VDGVTYSII+LQLCKEGLLEEALQLVEEMEARGF++DLVTVTSLLIAMHKQG+W+GLERL
Sbjct: 421 VDGVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMHKQGQWEGLERL 480
Query: 481 MKHIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKVDI 540
MKHIREGDLVP+VLKWKANMEDS+KYQ+NKRKD S LFSPK DLSEIISSRASSV KV++
Sbjct: 481 MKHIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRASSVAKVNV 540
Query: 541 KDIFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSFDIDMVN 600
DI E TEEKD DNWSSSPH DLLANLAKST LQPFS+ G+RVQAKG NSFDIDMVN
Sbjct: 541 DDISENTEEKDDDNWSSSPHVDLLANLAKSTGDSLQPFSLSPGQRVQAKGDNSFDIDMVN 600
Query: 601 TFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEK 660
TFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLS+FVKKGYFHQAWGIFNEMGEK
Sbjct: 601 TFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEK 660
Query: 661 VCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDV 720
VCPAD+ATYN+IIQGLGKMGRADLASSVL+KLME+GGYLDIVMYNTL+NALGKAGRMDDV
Sbjct: 661 VCPADIATYNLIIQGLGKMGRADLASSVLEKLMEKGGYLDIVMYNTLMNALGKAGRMDDV 720
Query: 721 NKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTLDFL 780
NKLFEQMRSSGINPDVV+FNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPN+VTDT LDFL
Sbjct: 721 NKLFEQMRSSGINPDVVSFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTILDFL 780
Query: 781 GREIEKVRYDKASIIRDKNSS 800
GREIEK RY+KASI+R+KNSS
Sbjct: 781 GREIEKARYEKASIMREKNSS 801
BLAST of Lcy08g008660 vs. NCBI nr
Match:
XP_022929794.1 (pentatricopeptide repeat-containing protein At4g01570 [Cucurbita moschata])
HSP 1 Score: 1440.2 bits (3727), Expect = 0.0e+00
Identity = 719/799 (89.99%), Postives = 755/799 (94.49%), Query Frame = 0
Query: 1 MRHGRGDFVAMESRATSTLSQLADLLLVASVTKTLSESGTRTLQHHSLPISEHLLLQILH 60
MRHG G FVAMESRAT TLS+LADLLLVAS+TKTLSESGTRTLQH SL ISE LLLQIL
Sbjct: 1 MRHGIGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILR 60
Query: 61 SRSVHPSKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDGVAVD 120
SRSVHPS KLDFFKWCSLSPN++HS STYSQIF ILCRSGYLHEVP+LLSSMKRDGV VD
Sbjct: 61 SRSVHPSNKLDFFKWCSLSPNFSHSPSTYSQIFRILCRSGYLHEVPLLLSSMKRDGVDVD 120
Query: 121 SHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLALSIFL 180
SHTFKVLLDAFIRSGKFD AL+ILDHMEELGTSLELNTYNSVLVALV+KNQVGLALSIF
Sbjct: 121 SHTFKVLLDAFIRSGKFDDALDILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFF 180
Query: 181 KLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKGFEFN 240
KLFDAFS GGQEG+A SF+FLPNALACNELLVALRKSDMR+EFKKVFDKLR I+ FEFN
Sbjct: 181 KLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKKVFDKLRTIRSFEFN 240
Query: 241 VCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVKDA 300
VCGYNICIHAFGCWGYLDTSLALFKEMKQ+SLVS SF PDLCTYNSLIHVLCLVGKV DA
Sbjct: 241 VCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFSPDLCTYNSLIHVLCLVGKVNDA 300
Query: 301 VIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLLDG 360
+IVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF PDTIVYNSLLDG
Sbjct: 301 LIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPDTIVYNSLLDG 360
Query: 361 LFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVD 420
LFKAR+V+EACQ FDKMVQEGVRASPWTYNILIDGLFRNGRA ASY+LFCDLKKKGQFVD
Sbjct: 361 LFKARRVVEACQFFDKMVQEGVRASPWTYNILIDGLFRNGRAEASYTLFCDLKKKGQFVD 420
Query: 421 GVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERLMK 480
GVTYSII+LQLCKEGLLEEALQLVEEMEARGF++DLVTVTSLLIAMHKQG+W+GLERLMK
Sbjct: 421 GVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMHKQGQWEGLERLMK 480
Query: 481 HIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKVDIKD 540
HIREGDLVP+VLKWKANMEDS+KYQ+NKRKD S LFSPK DLSEIISSRASSV KVD D
Sbjct: 481 HIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRASSVAKVD--D 540
Query: 541 IFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSFDIDMVNTF 600
I E TEEKD DNWSSSPH DLLANLAKST LQPFS+ G+RVQAKG NSFDIDMVNTF
Sbjct: 541 ISENTEEKDDDNWSSSPHVDLLANLAKSTGDSLQPFSLSPGQRVQAKGDNSFDIDMVNTF 600
Query: 601 LSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVC 660
LSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLS+FVKKGYF QAWGIFNEMGEKVC
Sbjct: 601 LSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSAFVKKGYFEQAWGIFNEMGEKVC 660
Query: 661 PADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDVNK 720
PAD+ATYNVIIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTL+NALGKAGRMDDVNK
Sbjct: 661 PADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNK 720
Query: 721 LFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTLDFLGR 780
LFEQMRSSGINPDVV+FNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPN+VTDT LDFLGR
Sbjct: 721 LFEQMRSSGINPDVVSFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNHVTDTILDFLGR 780
Query: 781 EIEKVRYDKASIIRDKNSS 800
EIEK RY+KASI+R+KNSS
Sbjct: 781 EIEKARYEKASIMREKNSS 797
BLAST of Lcy08g008660 vs. NCBI nr
Match:
XP_022992119.1 (pentatricopeptide repeat-containing protein At4g01570 [Cucurbita maxima])
HSP 1 Score: 1433.7 bits (3710), Expect = 0.0e+00
Identity = 712/799 (89.11%), Postives = 755/799 (94.49%), Query Frame = 0
Query: 1 MRHGRGDFVAMESRATSTLSQLADLLLVASVTKTLSESGTRTLQHHSLPISEHLLLQILH 60
MRHG G FVAMESRAT TLS+LADLLLVAS+TKTLSESGTRTLQH SL ISE LLLQIL
Sbjct: 1 MRHGIGGFVAMESRATPTLSRLADLLLVASITKTLSESGTRTLQHQSLSISEPLLLQILR 60
Query: 61 SRSVHPSKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDGVAVD 120
SRSVHPS KLDFFKWCSLSPN++HSASTYSQIF ILCRSGY HEVP+LLSSMKRDGV VD
Sbjct: 61 SRSVHPSNKLDFFKWCSLSPNFSHSASTYSQIFRILCRSGYFHEVPLLLSSMKRDGVDVD 120
Query: 121 SHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLALSIFL 180
SHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALV+KNQVGLALSIF
Sbjct: 121 SHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVRKNQVGLALSIFF 180
Query: 181 KLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKGFEFN 240
KLFDAFS GGQEG+A SF+FLPNALACNELLVALRKSDMR+EFK VFDKLR I+ FEFN
Sbjct: 181 KLFDAFSTGGQEGSAVPSFSFLPNALACNELLVALRKSDMRVEFKMVFDKLRTIRSFEFN 240
Query: 241 VCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVKDA 300
VCGYNICIHAFGCWGYLDTSLALFKEMKQ+SLVS SFGPDLCTYNSLIHVLCLVGKV DA
Sbjct: 241 VCGYNICIHAFGCWGYLDTSLALFKEMKQRSLVSVSFGPDLCTYNSLIHVLCLVGKVNDA 300
Query: 301 VIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLLDG 360
+IVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDAT IFNEMEYNGF P+TIVYNSLLDG
Sbjct: 301 LIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATAIFNEMEYNGFVPNTIVYNSLLDG 360
Query: 361 LFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVD 420
LFKAR+V+EACQ FDKMVQ+GVRASPWTYNILIDGLFRNGRA ASYSLFCDLKKKGQFVD
Sbjct: 361 LFKARRVVEACQFFDKMVQDGVRASPWTYNILIDGLFRNGRAEASYSLFCDLKKKGQFVD 420
Query: 421 GVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERLMK 480
GVTYSII+LQLCKEGLLEEALQLVEEMEARGF++DLVTVTSLLIAM+KQG+W+GLERLMK
Sbjct: 421 GVTYSIIILQLCKEGLLEEALQLVEEMEARGFVIDLVTVTSLLIAMYKQGQWEGLERLMK 480
Query: 481 HIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKVDIKD 540
HIREGDLVP+VLKWKANMEDS+KYQ+NKRKD S LFSPK DLSEIISSRA+SV KV++ D
Sbjct: 481 HIREGDLVPNVLKWKANMEDSVKYQKNKRKDYSPLFSPKEDLSEIISSRAASVAKVNVDD 540
Query: 541 IFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSFDIDMVNTF 600
I E TEEKD DNWSSSPH DLLAN AKST LQ FS+ G+RVQ+KG NSFDIDMVNTF
Sbjct: 541 ISENTEEKDDDNWSSSPHVDLLANRAKSTGDSLQLFSLSPGQRVQSKGNNSFDIDMVNTF 600
Query: 601 LSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEKVC 660
LSIFLAKGKLSLACKLF+IFSDMGVNPVRYTYNSMLS+FVKKGYFHQAWGIFNEMGEKVC
Sbjct: 601 LSIFLAKGKLSLACKLFDIFSDMGVNPVRYTYNSMLSAFVKKGYFHQAWGIFNEMGEKVC 660
Query: 661 PADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDVNK 720
PAD+ATYN+IIQGLGKMGRADLASSVL+KLMEQGGYLDIVMYNTL+NALGKAGRMDDVNK
Sbjct: 661 PADIATYNLIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLMNALGKAGRMDDVNK 720
Query: 721 LFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTLDFLGR 780
LFEQMRSSGI PDVV+FNTLIEVHSKAGRFKDAYK+LKMMLDSGCSPN+VTDT LDFLGR
Sbjct: 721 LFEQMRSSGIYPDVVSFNTLIEVHSKAGRFKDAYKYLKMMLDSGCSPNHVTDTILDFLGR 780
Query: 781 EIEKVRYDKASIIRDKNSS 800
EIEK RY+KASI+RDKNSS
Sbjct: 781 EIEKARYEKASIMRDKNSS 799
BLAST of Lcy08g008660 vs. NCBI nr
Match:
XP_022134897.1 (pentatricopeptide repeat-containing protein At4g01570 [Momordica charantia] >XP_022134898.1 pentatricopeptide repeat-containing protein At4g01570 [Momordica charantia] >XP_022134899.1 pentatricopeptide repeat-containing protein At4g01570 [Momordica charantia] >XP_022134900.1 pentatricopeptide repeat-containing protein At4g01570 [Momordica charantia])
HSP 1 Score: 1433.7 bits (3710), Expect = 0.0e+00
Identity = 713/800 (89.12%), Postives = 758/800 (94.75%), Query Frame = 0
Query: 1 MRHGRGDFVAMESRATSTLSQLADLLLVASVTKTLSESGTRTLQH--HSLPISEHLLLQI 60
MRHGR FVAMESRA S+LSQ+ADLLLVAS+TKTLSESGTRTLQH HSLP+SE LLLQI
Sbjct: 1 MRHGRRGFVAMESRAMSSLSQMADLLLVASLTKTLSESGTRTLQHHSHSLPLSEPLLLQI 60
Query: 61 LHSRSVHPSKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDGVA 120
L SRS+HPSKKL+FF WCSLSPNY HSASTYS+I HILCR+GYLHEVP+LLSSMKRDGVA
Sbjct: 61 LRSRSLHPSKKLEFFTWCSLSPNYKHSASTYSRILHILCRAGYLHEVPLLLSSMKRDGVA 120
Query: 121 VDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLALSI 180
VDSHTFK+LLDAFI SGKFDAALEILDHMEELGT LEL+TYNS+L+ALV+KNQVGLALSI
Sbjct: 121 VDSHTFKLLLDAFIGSGKFDAALEILDHMEELGTGLELHTYNSLLLALVRKNQVGLALSI 180
Query: 181 FLKLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKGFE 240
FLKLFDAF NGG GT A S +FLP++LACNELLVALR++DMRIEFKKVFDKLR I+GFE
Sbjct: 181 FLKLFDAFYNGGHVGTVADSISFLPSSLACNELLVALRRADMRIEFKKVFDKLREIRGFE 240
Query: 241 FNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVK 300
FN+CGYNICIHAFGCWGYLDTSLALFKEMKQKS VS+SFGPDLCTYNSLIHVLCLVG+VK
Sbjct: 241 FNICGYNICIHAFGCWGYLDTSLALFKEMKQKSSVSQSFGPDLCTYNSLIHVLCLVGRVK 300
Query: 301 DAVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLL 360
DA+IVWEELKGSGHEPDAFTYR+IIQGCCKSYRMDDATMIFNEMEYNGFT DTIVYNSLL
Sbjct: 301 DALIVWEELKGSGHEPDAFTYRLIIQGCCKSYRMDDATMIFNEMEYNGFTLDTIVYNSLL 360
Query: 361 DGLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQF 420
DGLFKARKV+E CQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAA YSLFCDLKKKGQF
Sbjct: 361 DGLFKARKVVEGCQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAAGYSLFCDLKKKGQF 420
Query: 421 VDGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERL 480
VDGVTYSI+VLQLCKEGLLEEA+Q VEEME RGFIVDL+TV+SLLI MHKQGRWDGLERL
Sbjct: 421 VDGVTYSIVVLQLCKEGLLEEAIQSVEEMEVRGFIVDLITVSSLLIGMHKQGRWDGLERL 480
Query: 481 MKHIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKVDI 540
MKHIREGDLVP+VLKWKANMEDS+KYQQNKRKD S+LFSPK DL+EIISSRASSVMKVDI
Sbjct: 481 MKHIREGDLVPNVLKWKANMEDSVKYQQNKRKDYSTLFSPKEDLNEIISSRASSVMKVDI 540
Query: 541 KDIFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSFDIDMVN 600
IF TEE NWS SPH DLLANLA+STSH QPFS+ QGRRVQAKG NSFDIDMVN
Sbjct: 541 NGIFINTEE----NWSESPHVDLLANLARSTSHSSQPFSLAQGRRVQAKGANSFDIDMVN 600
Query: 601 TFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEK 660
TFLSIFLAKGKLSLACKLFEIFSDMGV+PVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEK
Sbjct: 601 TFLSIFLAKGKLSLACKLFEIFSDMGVSPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEK 660
Query: 661 VCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDV 720
VCPAD+ATYN+IIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMD+V
Sbjct: 661 VCPADIATYNMIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDEV 720
Query: 721 NKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTLDFL 780
NKLF+QMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGC+PN+VTDTTLDFL
Sbjct: 721 NKLFQQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCAPNHVTDTTLDFL 780
Query: 781 GREIEKVRYDKASIIRDKNS 799
GREIEK+RY+KASIIRDKNS
Sbjct: 781 GREIEKMRYEKASIIRDKNS 796
BLAST of Lcy08g008660 vs. TAIR 10
Match:
AT4G01570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 991.5 bits (2562), Expect = 3.9e-289
Identity = 504/805 (62.61%), Postives = 624/805 (77.52%), Query Frame = 0
Query: 1 MRHGRGDFVA-----MESRATSTLSQLADLLLVASVTKTLSESGTRTLQHHSLPISEHLL 60
MRHGRG V+ + S QL ++LLVAS++KTLS+SGTR+L +S+PISE ++
Sbjct: 1 MRHGRGSAVSAAISGLSPAKNSPFPQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVV 60
Query: 61 LQILHSRSVHPSKKLDFFKWC-SLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKR 120
LQIL S+ PSKKLDFF+WC SL P Y HSA+ YSQIF +CR+G L EVP LL SMK
Sbjct: 61 LQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKE 120
Query: 121 DGVAVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGL 180
DGV +D K+LLD+ IRSGKF++AL +LD+MEELG L + Y+SVL+ALVKK+++ L
Sbjct: 121 DGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRL 180
Query: 181 ALSIFLKLFDAFSNGGQEGTAAASF-AFLPNALACNELLVALRKSDMRIEFKKVFDKLRA 240
ALSI KL +A N + T ++LP +A NELLV LR++DMR EFK+VF+KL+
Sbjct: 181 ALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKG 240
Query: 241 IKGFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLV-SESFGPDLCTYNSLIHVLC 300
+K F+F+ YNICIH FGCWG LD +L+LFKEMK++S V SFGPD+CTYNSLIHVLC
Sbjct: 241 MKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLC 300
Query: 301 LVGKVKDAVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTI 360
L GK KDA+IVW+ELK SGHEPD TYR++IQGCCKSYRMDDA I+ EM+YNGF PDTI
Sbjct: 301 LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTI 360
Query: 361 VYNSLLDGLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDL 420
VYN LLDG KARKV EACQLF+KMVQEGVRAS WTYNILIDGLFRNGRA A ++LFCDL
Sbjct: 361 VYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420
Query: 421 KKKGQFVDGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRW 480
KKKGQFVD +T+SI+ LQLC+EG LE A++LVEEME RGF VDLVT++SLLI HKQGRW
Sbjct: 421 KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRW 480
Query: 481 DGLERLMKHIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASS 540
D E+LMKHIREG+LVP+VL+W A +E S+K Q+K KD + +F KG +I+S S
Sbjct: 481 DWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSE 540
Query: 541 VMKVDIKDIFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSF 600
D E+ + D WSSSP+ D LA+ F + +G+RV+AK +SF
Sbjct: 541 ----DDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPL---FGLARGQRVEAK-PDSF 600
Query: 601 DIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPV-RYTYNSMLSSFVKKGYFHQAWGI 660
D+DM+NTFLSI+L+KG LSLACKLFEIF+ MGV + YTYNSM+SSFVKKGYF A G+
Sbjct: 601 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 660
Query: 661 FNEMGEKVCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGK 720
++M E C AD+ATYNVIIQGLGKMGRADLAS+VLD+L +QGGYLDIVMYNTLINALGK
Sbjct: 661 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 720
Query: 721 AGRMDDVNKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVT 780
A R+D+ +LF+ M+S+GINPDVV++NT+IEV+SKAG+ K+AYK+LK MLD+GC PN+VT
Sbjct: 721 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 780
Query: 781 DTTLDFLGREIEKVRYDKASIIRDK 797
DT LD+LG+E+EK R+ KAS +R+K
Sbjct: 781 DTILDYLGKEMEKARFKKASFVRNK 797
BLAST of Lcy08g008660 vs. TAIR 10
Match:
AT4G31850.1 (proton gradient regulation 3 )
HSP 1 Score: 219.2 bits (557), Expect = 1.2e-56
Identity = 179/690 (25.94%), Postives = 308/690 (44.64%), Query Frame = 0
Query: 102 LHEVPILLSSMKRDGVAVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNS 161
L V S M++DG D TF +L+DA ++G F A + LD M + G L+TYN+
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 162 VLVALVKKNQVGLALSIFLKLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMR 221
++ L++ +++ AL +F G E S P A + KS
Sbjct: 404 LICGLLRVHRLDDALELF---------GNME-----SLGVKPTAYTYIVFIDYYGKSGDS 463
Query: 222 IEFKKVFDKLRAIKGFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDL 281
+ + F+K++ KG N+ N +++ G + +F +K LV PD
Sbjct: 464 VSALETFEKMKT-KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV-----PDS 523
Query: 282 CTYNSLIHVLCLVGKVKDAVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNE 341
TYN ++ VG++ +A+ + E+ +G EPD +I K+ R+D+A +F
Sbjct: 524 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 583
Query: 342 MEYNGFTPDTIVYNSLLDGLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGR 401
M+ P + YN+LL GL K K+ EA +LF+ MVQ+G + T+N L D L +N
Sbjct: 584 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 643
Query: 402 AAASYSLFCDLKKKGQFVDGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTS 461
+ + + G D TY+ I+ L K G ++EA+ +M+ + D VT+ +
Sbjct: 644 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCT 703
Query: 462 LLIAMHKQGRWDGLERLMKHIREG-----------DLVPSVLKWKANMEDSMKYQQNK-- 521
LL + K + +++ + DL+ S+L +A +++++ + +
Sbjct: 704 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILA-EAGIDNAVSFSERLVA 763
Query: 522 ---RKDNSSLFSPKGDLSEIISSRASSVMKVDIKDIFEKTEEKDADNWSSSPHADLLANL 581
+D S+ P II + +FEK KD P +LL
Sbjct: 764 NGICRDGDSILVP------IIRYSCKHNNVSGARTLFEKF-TKDLGVQPKLPTYNLLIGG 823
Query: 582 AKSTSHYLQPFSVGQGRRVQAKGTNSF-DIDMVNTFLSIFLAKGKLSLACKLFEIFSDMG 641
+ Q +Q K T D+ N L + GK+ +LFE++ +M
Sbjct: 824 LLEA----DMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID---ELFELYKEMS 883
Query: 642 VNPVR---YTYNSMLSSFVKKGYFHQAWGIFNE-MGEKVCPADVATYNVIIQGLGKMGRA 701
+ T+N ++S VK G A ++ + M ++ TY +I GL K GR
Sbjct: 884 THECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL 943
Query: 702 DLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFEQMRSSGINPDVVTFNTL 761
A + + +++ G + +YN LIN GKAG D LF++M G+ PD+ T++ L
Sbjct: 944 YEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 997
Query: 762 IEVHSKAGRFKDAYKFLKMMLDSGCSPNYV 771
++ GR + + K + +SG +P+ V
Sbjct: 1004 VDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
BLAST of Lcy08g008660 vs. TAIR 10
Match:
AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 218.4 bits (555), Expect = 2.1e-56
Identity = 169/723 (23.37%), Postives = 328/723 (45.37%), Query Frame = 0
Query: 67 SKKLDFFKWCSLSPNYNHSASTYSQIFHILCRSGYLHEVPILLSSMKRDGVAVDSHTFKV 126
++ +++F+W H +Y+ + ++ R + +L M G +T
Sbjct: 79 NRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIE 138
Query: 127 LLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVKKNQVGLALSIFLKLFDAF 186
++ +++ K +++ M + + Y +++ A N + L++F ++
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM---- 198
Query: 187 SNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVFDKLRAIKGFEFNVCGYNI 246
+ P L+ K + D++++ + ++ YN+
Sbjct: 199 ----------QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS-SSLDADIVLYNV 258
Query: 247 CIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVKDAVIVWEE 306
CI +FG G +D + F E++ L PD TY S+I VLC ++ +AV ++E
Sbjct: 259 CIDSFGKVGKVDMAWKFFHEIEANGL-----KPDEVTYTSMIGVLCKANRLDEAVEMFEH 318
Query: 307 LKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLLDGLFKARK 366
L+ + P + Y +I G + + D+A + G P I YN +L L K K
Sbjct: 319 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 378
Query: 367 VIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFVDGVTYSI 426
V EA ++F++M ++ + TYNILID L R G+ ++ L ++K G F + T +I
Sbjct: 379 VDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 438
Query: 427 IVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERLMKHIREGD 486
+V +LCK L+EA + EEM+ + D +T SL+ + K GR D ++ + + + D
Sbjct: 439 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 498
Query: 487 LVPSVLKWKANMEDSMKYQQNKRKDNSSLFSP------KGDLSEIISSRASSVMKVDIKD 546
+ + + + +++ + +++D ++ DL +++++ + K +
Sbjct: 499 CRTNSIVYTSLIKNF--FNHGRKEDGHKIYKDMINQNCSPDL-QLLNTYMDCMFKAGEPE 558
Query: 547 ----IFEKTEEK----DADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSF 606
+FE+ + + DA ++S H + A A T Y +S+ + V
Sbjct: 559 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET--YELFYSMKEQGCV-------L 618
Query: 607 DIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIF 666
D N + F GK++ A +L E G P TY S++ K +A+ +F
Sbjct: 619 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 678
Query: 667 NEMGEKVCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKA 726
E K +V Y+ +I G GK+GR D A +L++LM++G ++ +N+L++AL KA
Sbjct: 679 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 738
Query: 727 GRMDDVNKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTD 776
+++ F+ M+ P+ VT+ LI K +F A+ F + M G P+ ++
Sbjct: 739 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 768
BLAST of Lcy08g008660 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 209.1 bits (531), Expect = 1.3e-53
Identity = 169/724 (23.34%), Postives = 312/724 (43.09%), Query Frame = 0
Query: 55 LLQILHSRSVHPSKKLDF----FKWCSLSPNYNH--SASTYSQIFHILCRSGYLHEVPIL 114
LL L H KK D F W +Y S + I +L + G + +
Sbjct: 138 LLAFLKGLGFH--KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANM 197
Query: 115 LSSMKRDGVAVDSHTFKVLLDAFIRSGKFDAALEILDHMEELGTSLELNTYNSVLVALVK 174
+ ++ DG ++D +++ L+ AF SG++ A+ + MEE G L TYN +L K
Sbjct: 198 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 257
Query: 175 KNQVGLALSIFLKLFDAFSNGGQEGTAAASFAFLPNALACNELLVALRKSDMRIEFKKVF 234
+G + L + + G P+A N L+ ++ + E +VF
Sbjct: 258 ---MGTPWNKITSLVEKMKSDG----------IAPDAYTYNTLITCCKRGSLHQEAAQVF 317
Query: 235 DKLRAIKGFEFNVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLI 294
++++A GF ++ YN + +G ++ + EM V F P + TYNSLI
Sbjct: 318 EEMKA-AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM-----VLNGFSPSIVTYNSLI 377
Query: 295 HVLCLVGKVKDAVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFT 354
G + +A+ + ++ G +PD FTY ++ G ++ +++ A IF EM G
Sbjct: 378 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 437
Query: 355 PDTIVYNSLLDGLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSL 414
P+ +N+ + K E ++FD++ G+ T+N L+ +NG + +
Sbjct: 438 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 497
Query: 415 FCDLKKKGQFVDGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHK 474
F ++K+ G + T++ ++ + G E+A+ + M G DL T ++L A+ +
Sbjct: 498 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 557
Query: 475 QGRWDGLERLMKHIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISS 534
G W+ E+++ + +G P+ L + SL + EI
Sbjct: 558 GGMWEQSEKVLAEMEDGRCKPNELTY------------------CSLLHAYANGKEI--- 617
Query: 535 RASSVMKVDIKDIFEKTEEKDADNWSSSPHADLLANLAKST-SHYLQPFSVGQGRRVQAK 594
L+ +LA+ S ++P +V
Sbjct: 618 -------------------------------GLMHSLAEEVYSGVIEPRAV--------- 677
Query: 595 GTNSFDIDMVNTFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQ 654
++ T + + L A + F + G +P T NSM+S + ++ +
Sbjct: 678 --------LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 737
Query: 655 AWGIFNEMGEKVCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLIN 714
A G+ + M E+ +ATYN ++ + + +L +++ +G DI+ YNT+I
Sbjct: 738 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 771
Query: 715 ALGKAGRMDDVNKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSP 772
A + RM D +++F +MR+SGI PDV+T+NT I ++ F++A ++ M+ GC P
Sbjct: 798 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRP 771
BLAST of Lcy08g008660 vs. TAIR 10
Match:
AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 200.3 bits (508), Expect = 5.9e-51
Identity = 137/537 (25.51%), Postives = 251/537 (46.74%), Query Frame = 0
Query: 240 NVCGYNICIHAFGCWGYLDTSLALFKEMKQKSLVSESFGPDLCTYNSLIHVLCLVGKVKD 299
++ +N + A D ++L ++M++ +V L TYN LI+ C ++
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-----GLYTYNILINCFCRRSQISL 143
Query: 300 AVIVWEELKGSGHEPDAFTYRVIIQGCCKSYRMDDATMIFNEMEYNGFTPDTIVYNSLLD 359
A+ + ++ G+EP T ++ G C R+ DA + ++M G+ PDTI + +L+
Sbjct: 144 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 203
Query: 360 GLFKARKVIEACQLFDKMVQEGVRASPWTYNILIDGLFRNGRAAASYSLFCDLKKKGQFV 419
GLF K EA L D+MVQ G + + TY ++++GL + G + +L ++
Sbjct: 204 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 263
Query: 420 DGVTYSIIVLQLCKEGLLEEALQLVEEMEARGFIVDLVTVTSLLIAMHKQGRWDGLERLM 479
D V ++ I+ LCK +++AL L +EME +G ++VT +SL+ + GRW +L+
Sbjct: 264 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 323
Query: 480 KHIREGDLVPSVLKWKANMEDSMKYQQNKRKDNSSLFSPKGDLSEIISSRASSVMKVDIK 539
+ E + P+++ + A ++ +K + K + L+
Sbjct: 324 SDMIEKKINPNLVTFNALIDAFVK--EGKFVEAEKLYD---------------------- 383
Query: 540 DIFEKTEEKDADNWSSSPHADLLANLAKSTSHYLQPFSVGQGRRVQAKGTNSF-DIDMVN 599
D+ +++ + D ++S + + + + F V + + F D+ N
Sbjct: 384 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE-FMVSK---------DCFPDVVTYN 443
Query: 600 TFLSIFLAKGKLSLACKLFEIFSDMGVNPVRYTYNSMLSSFVKKGYFHQAWGIFNEMGEK 659
T + F ++ +LF S G+ TY +++ G A +F +M
Sbjct: 444 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 503
Query: 660 VCPADVATYNVIIQGLGKMGRADLASSVLDKLMEQGGYLDIVMYNTLINALGKAGRMDDV 719
P D+ TY++++ GL G+ + A V D + + LDI +Y T+I + KAG++DD
Sbjct: 504 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 563
Query: 720 NKLFEQMRSSGINPDVVTFNTLIEVHSKAGRFKDAYKFLKMMLDSGCSPNYVTDTTL 776
LF + G+ P+VVT+NT+I ++AY LK M + G PN T TL
Sbjct: 564 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8VZE4 | 5.5e-288 | 62.61 | Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana OX... | [more] |
Q9SZ52 | 1.7e-55 | 25.94 | Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... | [more] |
Q9M907 | 2.9e-55 | 23.37 | Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX... | [more] |
Q9LYZ9 | 1.8e-52 | 23.34 | Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... | [more] |
Q9SXD8 | 8.3e-50 | 25.51 | Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EPT7 | 0.0e+00 | 89.99 | pentatricopeptide repeat-containing protein At4g01570 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1C0Z4 | 0.0e+00 | 89.13 | pentatricopeptide repeat-containing protein At4g01570 OS=Momordica charantia OX=... | [more] |
A0A6J1JWP1 | 0.0e+00 | 89.11 | pentatricopeptide repeat-containing protein At4g01570 OS=Cucurbita maxima OX=366... | [more] |
A0A5A7TE47 | 0.0e+00 | 86.18 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CBH7 | 0.0e+00 | 86.18 | pentatricopeptide repeat-containing protein At4g01570 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
XP_023549441.1 | 0.0e+00 | 90.36 | pentatricopeptide repeat-containing protein At4g01570 [Cucurbita pepo subsp. pep... | [more] |
KAG7013843.1 | 0.0e+00 | 90.01 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022929794.1 | 0.0e+00 | 89.99 | pentatricopeptide repeat-containing protein At4g01570 [Cucurbita moschata] | [more] |
XP_022992119.1 | 0.0e+00 | 89.11 | pentatricopeptide repeat-containing protein At4g01570 [Cucurbita maxima] | [more] |
XP_022134897.1 | 0.0e+00 | 89.13 | pentatricopeptide repeat-containing protein At4g01570 [Momordica charantia] >XP_... | [more] |
Match Name | E-value | Identity | Description | |
AT4G01570.1 | 3.9e-289 | 62.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G31850.1 | 1.2e-56 | 25.94 | proton gradient regulation 3 | [more] |
AT3G06920.1 | 2.1e-56 | 23.37 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G02860.1 | 1.3e-53 | 23.34 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G62590.1 | 5.9e-51 | 25.51 | pentatricopeptide (PPR) repeat-containing protein | [more] |