Lcy08g008650 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g008650
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr08: 16737660 .. 16738936 (-)
RNA-Seq Expression	Lcy08g008650
Synteny	Lcy08g008650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTAATACCACTGTTATGCCTACACGTTGCAGACAATGCCAAAGACCCGTGGATTCAACAAACACGCACTAACGAAGCAGGGCATGCAAGGTCACACTAGTTTGAACGAACAATCAAGAGAACTCCAAAACAGAGAAACTTTCTCTGTAGCTTGCGATGAAGATAAAGAAAGACGAAGGAAAGAACACACACACGGAAGAATACACAACACAGGGAACAATTAAGCAAGTAGAAGAAGAAGACACAAGGAATTAAGTGGTTCGGCAACAGAGGCCTACATCCACTGTAAGGGAGCTTGAAAATTTTATTAGGGCTTTCCGATTACAAAGGTACAATACTGAAATCTCCCAGTAATTTCTCTCACACTTTCTTCTAACTCTATTTCACCATTTATACTACTAAGAGTTAGTTTGTTTTCTGTTAAAACAGACACGTGATGAGCTTTGTTTACAACTTTCCATATCAGGTAAGTTCTCCAACAGTTAGGTTTCATTTTGGTCACTGAATTTTCAAACTCGGCAATTTAGCCTTGAGGTTTGGGTTAGGTTTCATTTTGGTCCCTCCATCAATTTTTCCGTTAAATACTAACGGATTGATGACGTGACATTATTTTTTTATTAAAAAAATTATTTTTTAATTTTTAAAAATAAAAATAAATAAAAATAATAAAAATAATAAAATATCATTATTATTATTTGAAATTTCTTTCTTCTTTATTTCTTTTTTCTTTATTTCTTTTTCCTCTTTTCTTTTTCTTCTTCAAACCCTAAGCCATCACCATAGCCACCATCACCATAGCTACAGGCACCGACCGCCGTCGTCGCCGGCCGCCGGAGATTTTTGTTTCTTCTTTGCTTCTCTCTCCCTCTCTCATCTCTCCTCTCTTTACCCTGTTTCAGTCGAAGAAGTGCTTCGGAAGGCGACCCACATGATTCCTCAACCTCCGGCGACGATCTCCAACCAGTCCTCACGCTCCAGCAATGTCGGATTGACACCCCATACAAGATCCACAAGGTTCACGCTCCAACAACCTCCGGCGGCGATCTCCTTCCAAATCTGGGCTCAAATCAAAGAGAACGAATGAGGAAGAGGATCCGGCCTGAAGAACAACGAAAAATCCATGGGTTTCATTTCAGATCTAAGTTTCAATTTGGAATCGGCACGGCGCGACTTCAGGCGAACGACTGCTTTAGACTCGACGCAGCTTCAGGCGAACGACGGCGAAGGTACTGCTCTACTTCAGGCTCGGTTTCGTGACTAAGAGAGAGAGAG

mRNA sequence

ATGGCTCTAATACCACTGTTATGCCTACACGTTGCAGACAATGCCAAAGACCCGTGGATTCAACAAACACGCACTAACGAAGCAGGGCATGCAAGTCGAAGAAGTGCTTCGGAAGGCGACCCACATGATTCCTCAACCTCCGGCGACGATCTCCAACCAGTCCTCACGCTCCAGCAATGTCGGATTGACACCCCATACAAGATCCACAAGGTTCACGCTCCAACAACCTCCGGCGGCGATCTCCTTCCAAATCTGGGCTCAAATCAAAGAGAACGAATGAGGAAGAGGATCCGGCCTGAAGAACAACGAAAAATCCATGGGTTTCATTTCAGATCTAAGTTTCAATTTGGAATCGGCACGGCGCGACTTCAGGCGAACGACTGCTTTAGACTCGACGCAGCTTCAGGCGAACGACGGCGAAGGTACTGCTCTACTTCAGGCTCGGTTTCGTGACTAAGAGAGAGAGAG

Coding sequence (CDS)

ATGGCTCTAATACCACTGTTATGCCTACACGTTGCAGACAATGCCAAAGACCCGTGGATTCAACAAACACGCACTAACGAAGCAGGGCATGCAAGTCGAAGAAGTGCTTCGGAAGGCGACCCACATGATTCCTCAACCTCCGGCGACGATCTCCAACCAGTCCTCACGCTCCAGCAATGTCGGATTGACACCCCATACAAGATCCACAAGGTTCACGCTCCAACAACCTCCGGCGGCGATCTCCTTCCAAATCTGGGCTCAAATCAAAGAGAACGAATGAGGAAGAGGATCCGGCCTGAAGAACAACGAAAAATCCATGGGTTTCATTTCAGATCTAAGTTTCAATTTGGAATCGGCACGGCGCGACTTCAGGCGAACGACTGCTTTAGACTCGACGCAGCTTCAGGCGAACGACGGCGAAGGTACTGCTCTACTTCAGGCTCGGTTTCGTGA

Protein sequence

MALIPLLCLHVADNAKDPWIQQTRTNEAGHASRRSASEGDPHDSSTSGDDLQPVLTLQQCRIDTPYKIHKVHAPTTSGGDLLPNLGSNQRERMRKRIRPEEQRKIHGFHFRSKFQFGIGTARLQANDCFRLDAASGERRRRYCSTSGSVS

Homology

The following BLAST results are available for this feature:

BLAST of Lcy08g008650 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g008650 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g008650 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g008650 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g008650.1	Lcy08g008650.1	mRNA