Lcy08g008250 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g008250
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr08: 14186770 .. 14187848 (-)
RNA-Seq ExpressionLcy08g008250
SyntenyLcy08g008250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATGGCGAGTGGGCAATGGAAACCTCATAAGCATAAAAGATGAGTCGTGGCTTCCCAAAACGGGAAATTATAAACCTACTTGGGTGAAGAGAGAGTGTTGGGGAAATAGAGCTGCTAGTCTTATTGATGCAAATGGCTCCTGGAAAGAAATCGAGATCAGAGATAGCTTTTGCCTTGCGGATGCTGAGGTGATTTTAAGCATTCCACTCGGGAGTAAGGAAACCAAGGACTCTATCTTATCGTGCCTTGACCCTAAAGGAAGGTTTTCTGTAAAAAATGCTTACCACCTAGCTTACAACCTATCAAGAGCTGAGATAGAGTCTCCCTCGAACAATGCTGGAACAAAAATGTTATGGAAAAAGCTCTGGTCGTTCAAGGTAGCTCCGAAGGAGAAAATGTGCACTTGGAGAGCCCTTCAAAACTCCCTTTCTACCCAAAATAATATCATTTTCAAAGGAATTGATACTAATCCTTTATGCTTTTTTTGCAGGAAGAAGGCCGAAACGGTGGATCATGTTCTCTGGGAGTGTAAGGTCGCAAAATCAGTTTGGGGTTTCTTTTTTCCTCACTTAATTGAGGTCTTTGATTTTTTCAGGGAGGGAGAAGCTTGCTCAGAAAAATGGGATAGTTTAATGAAGATTCCAGAATCAATGTACACAGCCACAGTGATAATTTGGAGCATTTGGACCCATAGAAACTCAGTAAAGAACAATTTAAATCACCCCAGATTCCAATTCTATAATCAGATCAGTTCGTAGTAGAGTGGGTGAAAAGGATTACCTGCGCACTTCCTCGATCAGCGATCAACGCTTGGAGAACCGTTCGAGTCACAGGGTCTGGGCCCCTCCCCCTCCAAATGTGTGGAAAATCAACTTGATGCCTCCTAGTCGGAAAATAACAGTTGTGGAGGTCTGGGTTGGATCACCCATGACTCCAATGGTTCTCTGATCTGCGCTGGTTTCAGGAAGATCAAGAAGCTTTGGCCGATCAAATGGATGGAATTGGAAGCTATTGCGGAAGGATTAAGGGCGTTGCTCGATCGTTTCGGATGCCCTCTCCCAAGAATCATCGTTGA

mRNA sequence

ATGAGATGGCGAGTGGGCAATGGAAACCTCATAAGCATAAAAGATGAGTCGTGGCTTCCCAAAACGGGAAATTATAAACCTACTTGGGTGAAGAGAGAGTGTTGGGGAAATAGAGCTGCTAGTCTTATTGATGCAAATGGCTCCTGGAAAGAAATCGAGATCAGAGATAGCTTTTGCCTTGCGGATGCTGAGGTGATTTTAAGCATTCCACTCGGGAGTAAGGAAACCAAGGACTCTATCTTATCGTGCCTTGACCCTAAAGGAAGGTTTTCTGTAAAAAATGCTTACCACCTAGCTTACAACCTATCAAGAGCTGAGATAGAGTCTCCCTCGAACAATGCTGGAACAAAAATGTTATGGAAAAAGCTCTGGTCGTTCAAGGTAGCTCCGAAGGAGAAAATGTGCACTTGGAGAGCCCTTCAAAACTCCCTTTCTACCCAAAATAATATCATTTTCAAAGGAATTGATACTAATCCTTTATGCTTTTTTTGCAGGAAGAAGGCCGAAACGGTGGATCATGTTCTCTGGGAGTATTCCAATTCTATAATCAGATCAGTTCGTAGTAGAGTGGGTGAAAAGGATTACCTGCGCACTTCCTCGATCAGCGATCAACGCTTGGAGAACCGTTCGAGTCACAGGGTCTGGGCCCCTCCCCCTCCAAATGTGTGGAAAATCAACTTGATGCCTCCTAGTCGGAAAATAACAGTTGTGGAGGAAGATCAAGAAGCTTTGGCCGATCAAATGGATGGAATTGGAAGCTATTGCGGAAGGATTAAGGGCGTTGCTCGATCGTTTCGGATGCCCTCTCCCAAGAATCATCGTTGA

Coding sequence (CDS)

ATGAGATGGCGAGTGGGCAATGGAAACCTCATAAGCATAAAAGATGAGTCGTGGCTTCCCAAAACGGGAAATTATAAACCTACTTGGGTGAAGAGAGAGTGTTGGGGAAATAGAGCTGCTAGTCTTATTGATGCAAATGGCTCCTGGAAAGAAATCGAGATCAGAGATAGCTTTTGCCTTGCGGATGCTGAGGTGATTTTAAGCATTCCACTCGGGAGTAAGGAAACCAAGGACTCTATCTTATCGTGCCTTGACCCTAAAGGAAGGTTTTCTGTAAAAAATGCTTACCACCTAGCTTACAACCTATCAAGAGCTGAGATAGAGTCTCCCTCGAACAATGCTGGAACAAAAATGTTATGGAAAAAGCTCTGGTCGTTCAAGGTAGCTCCGAAGGAGAAAATGTGCACTTGGAGAGCCCTTCAAAACTCCCTTTCTACCCAAAATAATATCATTTTCAAAGGAATTGATACTAATCCTTTATGCTTTTTTTGCAGGAAGAAGGCCGAAACGGTGGATCATGTTCTCTGGGAGTATTCCAATTCTATAATCAGATCAGTTCGTAGTAGAGTGGGTGAAAAGGATTACCTGCGCACTTCCTCGATCAGCGATCAACGCTTGGAGAACCGTTCGAGTCACAGGGTCTGGGCCCCTCCCCCTCCAAATGTGTGGAAAATCAACTTGATGCCTCCTAGTCGGAAAATAACAGTTGTGGAGGAAGATCAAGAAGCTTTGGCCGATCAAATGGATGGAATTGGAAGCTATTGCGGAAGGATTAAGGGCGTTGCTCGATCGTTTCGGATGCCCTCTCCCAAGAATCATCGTTGA

Protein sequence

MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAASLIDANGSWKEIEIRDSFCLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKMLWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLWEYSNSIIRSVRSRVGEKDYLRTSSISDQRLENRSSHRVWAPPPPNVWKINLMPPSRKITVVEEDQEALADQMDGIGSYCGRIKGVARSFRMPSPKNHR
Homology
BLAST of Lcy08g008250 vs. ExPASy TrEMBL
Match: A0A2N9FYH3 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20224 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.9e-26
Identity = 66/178 (37.08%), Postives = 99/178 (55.62%), Query Frame = 0

Query: 1    MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAA-SLIDANG-SWKEIEIRDSF 60
            MRWRVG+G  I I  + W+P    YK     R    N +  SLI+ +  SW    +++ F
Sbjct: 1177 MRWRVGSGESIRIWKDRWIPSPSTYKIMSPIRHLDENASVDSLINLHSMSWNVPLLQEVF 1236

Query: 61   CLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKM 120
               D E+I  IPL  +  +D+++     KG F+VK+AY++  + S A     S++    M
Sbjct: 1237 LPRDVELITQIPLSVRRPRDTLIWSGTKKGIFTVKSAYYMLLHQSSAGEAGSSSSRELSM 1296

Query: 121  LWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
             WK LWS +VAPK K+  WRA +N + T+  +  KG+     C +C ++AET+DHVLW
Sbjct: 1297 FWKNLWSTQVAPKVKLFAWRACRNIVPTKTKLFEKGLTATSSCSWCMEEAETIDHVLW 1354

BLAST of Lcy08g008250 vs. ExPASy TrEMBL
Match: A0A2N9J6I3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60908 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 8.6e-26
Identity = 66/180 (36.67%), Postives = 99/180 (55.00%), Query Frame = 0

Query: 1    MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAA-SLIDANG-SWKEIEIRDSF 60
            MRWRVG+G  I I  + W+P    YK     R    N +  SLI+ +  SW    +++ F
Sbjct: 1384 MRWRVGSGESIRIWKDRWIPSPSTYKIMSPIRHLDENASVDSLINLHSMSWNVPLLQEVF 1443

Query: 61   CLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKM 120
               D E+I  IPL  +  +D+++     KG F+VK+AY++  + S A     S++     
Sbjct: 1444 LPRDVELITQIPLSVRRPRDTLIWSGTKKGIFTVKSAYYMLLHQSSAGEAGSSSSRELST 1503

Query: 121  LWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLWEY 179
             WK LWS +VAPK K+  WRA +N + T+  +  KG+     C +C ++AET+DHVLW Y
Sbjct: 1504 FWKNLWSTQVAPKVKLFAWRACRNIVPTKTKLFEKGLTATFTCSWCMEEAETIDHVLWGY 1563

BLAST of Lcy08g008250 vs. ExPASy TrEMBL
Match: A0A2N9J5D9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59443 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-25
Identity = 65/178 (36.52%), Postives = 100/178 (56.18%), Query Frame = 0

Query: 1    MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAA-SLIDANG-SWKEIEIRDSF 60
            MRWRVG+G  I I  + W+P +  YK     R    N +  SLI+ +  SW    +++ F
Sbjct: 1205 MRWRVGSGESIRIWKDRWIPSSSTYKIMSPIRHLDENASVDSLINFHSMSWNVPLLQEVF 1264

Query: 61   CLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKM 120
               + E+I  IPL  +  +D+++     KG F+VK+AY++  + S A     S++    M
Sbjct: 1265 LPRNVELITQIPLSVRRPRDTLIWSGTKKGIFTVKSAYYMLLHQSSAGEAGSSSSRELSM 1324

Query: 121  LWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
             WK LWS +VAPK K+  WRA +N + T+  +  KG+     C +C ++AET+DHVLW
Sbjct: 1325 FWKNLWSTQVAPKVKLFAWRACRNIVPTKTKLFEKGLTATSSCSWCMEEAETIDHVLW 1382

BLAST of Lcy08g008250 vs. ExPASy TrEMBL
Match: A0A2N9GTH6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30533 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.6e-25
Identity = 69/179 (38.55%), Postives = 93/179 (51.96%), Query Frame = 0

Query: 1   MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGN-RAASLIDANG-SWKEIEIRDSF 60
           MRWRVG+G  I I  + WLP    Y+     R    N +  +LID    SWK  E+   F
Sbjct: 234 MRWRVGSGENIKIWKDPWLPCPTTYRVISPFRGLDENAKVDALIDRETMSWKVSELERIF 293

Query: 61  CLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYN-LSRAEIESPSNNAGTK 120
              D E IL IPL  +   D ++  +  KG F+VK+AY L  +  S+ E    S +    
Sbjct: 294 IPRDVEAILQIPLSKRRPNDMMIWAVTMKGNFTVKSAYQLLRSQQSQHEPTMSSTSVQNT 353

Query: 121 MLWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
            LW ++W  +V PK KM  WRA +N L TQ N+  +G+     C +C  +AET DHVLW
Sbjct: 354 KLWNRIWKARVQPKVKMFIWRACKNILPTQTNLFDRGVTQTFSCHWCEDEAETTDHVLW 412

BLAST of Lcy08g008250 vs. ExPASy TrEMBL
Match: A0A2N9IE72 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50326 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.6e-25
Identity = 69/179 (38.55%), Postives = 93/179 (51.96%), Query Frame = 0

Query: 1   MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGN-RAASLIDANG-SWKEIEIRDSF 60
           MRWRVG+G  I I  + WLP    Y+     R    N +  +LID    SWK  E+   F
Sbjct: 175 MRWRVGSGENIKIWKDPWLPCPTTYRVISPFRGLDENAKVDALIDRETMSWKVSELERIF 234

Query: 61  CLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYN-LSRAEIESPSNNAGTK 120
              D E IL IPL  +   D ++  +  KG F+VK+AY L  +  S+ E    S +    
Sbjct: 235 IPRDVEAILQIPLSKRRPNDMMIWAVTMKGNFTVKSAYQLLRSQQSQHEPTMSSTSVQNT 294

Query: 121 MLWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
            LW ++W  +V PK KM  WRA +N L TQ N+  +G+     C +C  +AET DHVLW
Sbjct: 295 KLWNRIWKARVQPKVKMFIWRACKNILPTQTNLFDRGVTQTFSCHWCEDEAETTDHVLW 353

BLAST of Lcy08g008250 vs. NCBI nr
Match: XP_042942883.1 (uncharacterized protein LOC122277065 [Carya illinoinensis])

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-24
Identity = 69/176 (39.20%), Postives = 97/176 (55.11%), Query Frame = 0

Query: 3   WRVGNGNLISIKDESWLPKTGNYKPTWVKRECWG-NRAASLID-ANGSWKEIEIRDSFCL 62
           WRVG+G+ I I  + WL KT   K T   R   G    A LID    SWK   +++ F  
Sbjct: 792 WRVGSGDKIHIWTDKWLAKTKPTKVTSPVRVLDGLATVAELIDPTTRSWKTELVKEIFEE 851

Query: 63  ADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKMLW 122
            +AEVIL  P+ S  ++D ++      G FSV++AYH+  +   A+    S +   K +W
Sbjct: 852 GEAEVILQTPVSSMNSRDRLIWHGTKGGSFSVRSAYHMEKDREMADKGQASTSKCLKGVW 911

Query: 123 KKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
            KLW  + AP EKM  WRA Q+SL TQ N+  + I ++PLC  C ++ E+  HVLW
Sbjct: 912 NKLWHIRTAPSEKMFLWRACQDSLPTQLNLFKRKIASDPLCPLCCREEESTMHVLW 967

BLAST of Lcy08g008250 vs. NCBI nr
Match: EEC84030.1 (hypothetical protein OsI_30257 [Oryza sativa Indica Group])

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-24
Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = 0

Query: 3   WRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAASLIDANGSWKEIEIRDSFCLAD 62
           W +GNG  + +  + W+P++ + +P   KR C     + LID +GSW   +I   F   D
Sbjct: 60  WHIGNGKSVKLWRDPWIPRSYSRRPISAKRNCRLRWVSDLIDRSGSWDTDKISHHFLPMD 119

Query: 63  AEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKMLWKK 122
            E IL+I L S+  +D I    D  GRFSV++AYHLA  L++ +  S S+  G+   W  
Sbjct: 120 VEAILNIRLSSRLEEDFIAWHPDRLGRFSVRSAYHLAVALAQVDDGSSSSGNGSSRAWNA 179

Query: 123 LWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
           LW      K K+  WRA+ NSL+T  N   + ++ + +C  C  ++E V H L+
Sbjct: 180 LWKCNAPQKVKIFAWRAITNSLTTLENKKKRKLEVSDICTICGVESEYVVHALF 233

BLAST of Lcy08g008250 vs. NCBI nr
Match: XP_035551723.1 (uncharacterized protein LOC118349891 [Juglans regia])

HSP 1 Score: 122.9 bits (307), Expect = 4.4e-24
Identity = 71/216 (32.87%), Postives = 109/216 (50.46%), Query Frame = 0

Query: 1   MRWRVGNGNLISIKDESWLPKTGNYK---PTWVKRECWGNRAASLIDANGSWKEIEIRDS 60
           +RWRVG+G  I+I  + WLP   +++   P  +   C   +   + +    W E  I+  
Sbjct: 738 LRWRVGDGQNINIWGQRWLPTPSSFRVQSPNPLLNTCVLVKDL-MFEGRKVWNEGFIKSI 797

Query: 61  FCLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTK 120
           F   +A++I+SIPL  ++  D ++     KG FSVK+AYHL  + SR  I   S   G  
Sbjct: 798 FSKEEADMIISIPLSKRDVDDRMIWGPSKKGIFSVKSAYHLEESRSRVSIGESSEQNGLG 857

Query: 121 MLWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLWE 180
            LWK +W   +    K   W+A  N L+T+ N+  K I  +  C  C ++ ETV HVLW+
Sbjct: 858 KLWKSIWGLNIPGSTKSFLWKAGNNLLATRKNLRSKRIVEDSRCPICLQEEETVLHVLWQ 917

Query: 181 -------YSNSIIRSVRSRVGEKDYLRTSSISDQRL 207
                  +S S+I   + RVGE D L    +  ++L
Sbjct: 918 CPAANDVWSGSVISVQKWRVGEGDLLGLLEVLTEKL 952

BLAST of Lcy08g008250 vs. NCBI nr
Match: KAG8387873.1 (hypothetical protein BUALT_Bualt02G0066800 [Buddleja alternifolia])

HSP 1 Score: 122.5 bits (306), Expect = 5.7e-24
Identity = 83/283 (29.33%), Postives = 129/283 (45.58%), Query Frame = 0

Query: 2   RWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGN-RAASLIDANGSWKEIEIRDS-FC 61
           RWRVGNG  I+I  + WLP T  +K T   R    N +  SLI+ N  W + ++ D  FC
Sbjct: 80  RWRVGNGEDIAIWFDPWLPSTSGFKITTRNRLLPMNAKVNSLINPNTGWWDSDLIDRVFC 139

Query: 62  LADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKML 121
             DA +I +IPLGS   +D ++      G F+V++AYHLA ++ R    S SN     + 
Sbjct: 140 PEDASIIKTIPLGSNNNRDRLIWNFSSSGFFAVRSAYHLAKDIDRRRAASSSNPKPPSLS 199

Query: 122 WKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHV----- 181
           W+ +W  +V PK ++  W+A +++L T  N++ + ++    C  C  + E + HV     
Sbjct: 200 WQFIWKTRVPPKIRVFAWKACKDALPTAANLLNRRVEVYAGCQHCESEREDLQHVLRCCP 259

Query: 182 ----LWEY---------SNSIIRSVRSRVGEKDYLRTSSI----------SDQRLENRSS 241
               LW            NS    +  +V E + +   S+          + Q   NR +
Sbjct: 260 FSRQLWALMGLPHHTISRNSETIELNQKVMENNNIHMESLITMIQSFHMTAHQIEPNRGA 319

Query: 242 HRV------WAPPPPNVWKINL------MPPSRKITVVEEDQE 243
             +      W+PP P   KIN        P S  + V+  D E
Sbjct: 320 QIIDTTVMHWSPPAPGWLKINFDGANFSEPKSIGLGVIARDSE 362

BLAST of Lcy08g008250 vs. NCBI nr
Match: EEC72938.1 (hypothetical protein OsI_06800 [Oryza sativa Indica Group])

HSP 1 Score: 122.1 bits (305), Expect = 7.5e-24
Identity = 62/174 (35.63%), Postives = 92/174 (52.87%), Query Frame = 0

Query: 3   WRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAASLIDANGSWKEIEIRDSFCLAD 62
           WR+GNG  + +  + W+P++ + +P   KR C     + LID + SW   +I   F   D
Sbjct: 331 WRIGNGKSVRLWRDPWIPRSFSRRPISAKRNCRLRWVSDLIDQSESWDTDKISQHFLPMD 390

Query: 63  AEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKMLWKK 122
           AE IL+I L S+   D I    D  GRFSV++AYHLA  L++ +  S S+  G    W  
Sbjct: 391 AEAILNIRLSSRLEDDFIAWHPDRLGRFSVRSAYHLAIALAQVDEGSSSSGNGNSRAWNA 450

Query: 123 LWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
           LW      K K+  WRA+ NSL T  N   + ++ + +C  C  ++E V H L+
Sbjct: 451 LWKCNAPQKVKIFAWRAITNSLPTLENKKKRKLEVSDICTICGVESEYVVHALF 504

BLAST of Lcy08g008250 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-10
Identity = 50/211 (23.70%), Postives = 98/211 (46.45%), Query Frame = 0

Query: 4   RVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAASLIDANGS---WKEIEIRDSFCL 63
           R+G  N++    +S  P+  N + T+  +E   N   +L +  GS   W + +I      
Sbjct: 49  RIGLDNIV----DSHPPRPLNTEETY--KEMTIN---NLFERKGSYYFWDDSKISQFVDQ 108

Query: 64  ADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKMLW 123
           +D   I  I L   +  D I+   +  G ++V++ Y L  +     I + +   G+  L 
Sbjct: 109 SDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLK 168

Query: 124 KKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLWEYSN 183
            ++W+  + PK K   WRAL  +L+T   +  +G+  +P C  C ++ E+++H L+    
Sbjct: 169 TRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALF---T 228

Query: 184 SIIRSVRSRVGEKDYLRTSSISDQRLENRSS 212
               ++  R+ +   +R   +S+   EN S+
Sbjct: 229 CPFATMAWRLSDSSLIRNQLMSNDFEENISN 247

BLAST of Lcy08g008250 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 49.7 bits (117), Expect = 4.4e-06
Identity = 20/54 (37.04%), Postives = 32/54 (59.26%), Query Frame = 0

Query: 123 LWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
           +WS K++PK K+  W+AL N+L     ++ + I   P C  CR   ET+ H+L+
Sbjct: 9   IWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCR-DFETITHILF 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9FYH33.9e-2637.08CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2022... [more]
A0A2N9J6I38.6e-2636.67Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60908 PE=4 SV=1[more]
A0A2N9J5D91.1e-2536.52CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5944... [more]
A0A2N9GTH65.6e-2538.55Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30533 PE=4 SV=1[more]
A0A2N9IE725.6e-2538.55Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50326 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_042942883.12.0e-2439.20uncharacterized protein LOC122277065 [Carya illinoinensis][more]
EEC84030.12.6e-2435.06hypothetical protein OsI_30257 [Oryza sativa Indica Group][more]
XP_035551723.14.4e-2432.87uncharacterized protein LOC118349891 [Juglans regia][more]
KAG8387873.15.7e-2429.33hypothetical protein BUALT_Bualt02G0066800 [Buddleja alternifolia][more]
EEC72938.17.5e-2435.63hypothetical protein OsI_06800 [Oryza sativa Indica Group][more]
Match NameE-valueIdentityDescription
AT3G09510.11.7e-1023.70Ribonuclease H-like superfamily protein [more]
AT3G26855.14.4e-0637.04RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 90..177
e-value: 1.6E-13
score: 51.2
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 2..180
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 2..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g008250.1Lcy08g008250.1mRNA