Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATGGCGAGTGGGCAATGGAAACCTCATAAGCATAAAAGATGAGTCGTGGCTTCCCAAAACGGGAAATTATAAACCTACTTGGGTGAAGAGAGAGTGTTGGGGAAATAGAGCTGCTAGTCTTATTGATGCAAATGGCTCCTGGAAAGAAATCGAGATCAGAGATAGCTTTTGCCTTGCGGATGCTGAGGTGATTTTAAGCATTCCACTCGGGAGTAAGGAAACCAAGGACTCTATCTTATCGTGCCTTGACCCTAAAGGAAGGTTTTCTGTAAAAAATGCTTACCACCTAGCTTACAACCTATCAAGAGCTGAGATAGAGTCTCCCTCGAACAATGCTGGAACAAAAATGTTATGGAAAAAGCTCTGGTCGTTCAAGGTAGCTCCGAAGGAGAAAATGTGCACTTGGAGAGCCCTTCAAAACTCCCTTTCTACCCAAAATAATATCATTTTCAAAGGAATTGATACTAATCCTTTATGCTTTTTTTGCAGGAAGAAGGCCGAAACGGTGGATCATGTTCTCTGGGAGTGTAAGGTCGCAAAATCAGTTTGGGGTTTCTTTTTTCCTCACTTAATTGAGGTCTTTGATTTTTTCAGGGAGGGAGAAGCTTGCTCAGAAAAATGGGATAGTTTAATGAAGATTCCAGAATCAATGTACACAGCCACAGTGATAATTTGGAGCATTTGGACCCATAGAAACTCAGTAAAGAACAATTTAAATCACCCCAGATTCCAATTCTATAATCAGATCAGTTCGTAGTAGAGTGGGTGAAAAGGATTACCTGCGCACTTCCTCGATCAGCGATCAACGCTTGGAGAACCGTTCGAGTCACAGGGTCTGGGCCCCTCCCCCTCCAAATGTGTGGAAAATCAACTTGATGCCTCCTAGTCGGAAAATAACAGTTGTGGAGGTCTGGGTTGGATCACCCATGACTCCAATGGTTCTCTGATCTGCGCTGGTTTCAGGAAGATCAAGAAGCTTTGGCCGATCAAATGGATGGAATTGGAAGCTATTGCGGAAGGATTAAGGGCGTTGCTCGATCGTTTCGGATGCCCTCTCCCAAGAATCATCGTTGA
mRNA sequence
ATGAGATGGCGAGTGGGCAATGGAAACCTCATAAGCATAAAAGATGAGTCGTGGCTTCCCAAAACGGGAAATTATAAACCTACTTGGGTGAAGAGAGAGTGTTGGGGAAATAGAGCTGCTAGTCTTATTGATGCAAATGGCTCCTGGAAAGAAATCGAGATCAGAGATAGCTTTTGCCTTGCGGATGCTGAGGTGATTTTAAGCATTCCACTCGGGAGTAAGGAAACCAAGGACTCTATCTTATCGTGCCTTGACCCTAAAGGAAGGTTTTCTGTAAAAAATGCTTACCACCTAGCTTACAACCTATCAAGAGCTGAGATAGAGTCTCCCTCGAACAATGCTGGAACAAAAATGTTATGGAAAAAGCTCTGGTCGTTCAAGGTAGCTCCGAAGGAGAAAATGTGCACTTGGAGAGCCCTTCAAAACTCCCTTTCTACCCAAAATAATATCATTTTCAAAGGAATTGATACTAATCCTTTATGCTTTTTTTGCAGGAAGAAGGCCGAAACGGTGGATCATGTTCTCTGGGAGTATTCCAATTCTATAATCAGATCAGTTCGTAGTAGAGTGGGTGAAAAGGATTACCTGCGCACTTCCTCGATCAGCGATCAACGCTTGGAGAACCGTTCGAGTCACAGGGTCTGGGCCCCTCCCCCTCCAAATGTGTGGAAAATCAACTTGATGCCTCCTAGTCGGAAAATAACAGTTGTGGAGGAAGATCAAGAAGCTTTGGCCGATCAAATGGATGGAATTGGAAGCTATTGCGGAAGGATTAAGGGCGTTGCTCGATCGTTTCGGATGCCCTCTCCCAAGAATCATCGTTGA
Coding sequence (CDS)
ATGAGATGGCGAGTGGGCAATGGAAACCTCATAAGCATAAAAGATGAGTCGTGGCTTCCCAAAACGGGAAATTATAAACCTACTTGGGTGAAGAGAGAGTGTTGGGGAAATAGAGCTGCTAGTCTTATTGATGCAAATGGCTCCTGGAAAGAAATCGAGATCAGAGATAGCTTTTGCCTTGCGGATGCTGAGGTGATTTTAAGCATTCCACTCGGGAGTAAGGAAACCAAGGACTCTATCTTATCGTGCCTTGACCCTAAAGGAAGGTTTTCTGTAAAAAATGCTTACCACCTAGCTTACAACCTATCAAGAGCTGAGATAGAGTCTCCCTCGAACAATGCTGGAACAAAAATGTTATGGAAAAAGCTCTGGTCGTTCAAGGTAGCTCCGAAGGAGAAAATGTGCACTTGGAGAGCCCTTCAAAACTCCCTTTCTACCCAAAATAATATCATTTTCAAAGGAATTGATACTAATCCTTTATGCTTTTTTTGCAGGAAGAAGGCCGAAACGGTGGATCATGTTCTCTGGGAGTATTCCAATTCTATAATCAGATCAGTTCGTAGTAGAGTGGGTGAAAAGGATTACCTGCGCACTTCCTCGATCAGCGATCAACGCTTGGAGAACCGTTCGAGTCACAGGGTCTGGGCCCCTCCCCCTCCAAATGTGTGGAAAATCAACTTGATGCCTCCTAGTCGGAAAATAACAGTTGTGGAGGAAGATCAAGAAGCTTTGGCCGATCAAATGGATGGAATTGGAAGCTATTGCGGAAGGATTAAGGGCGTTGCTCGATCGTTTCGGATGCCCTCTCCCAAGAATCATCGTTGA
Protein sequence
MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAASLIDANGSWKEIEIRDSFCLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKMLWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLWEYSNSIIRSVRSRVGEKDYLRTSSISDQRLENRSSHRVWAPPPPNVWKINLMPPSRKITVVEEDQEALADQMDGIGSYCGRIKGVARSFRMPSPKNHR
Homology
BLAST of Lcy08g008250 vs. ExPASy TrEMBL
Match:
A0A2N9FYH3 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20224 PE=4 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 3.9e-26
Identity = 66/178 (37.08%), Postives = 99/178 (55.62%), Query Frame = 0
Query: 1 MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAA-SLIDANG-SWKEIEIRDSF 60
MRWRVG+G I I + W+P YK R N + SLI+ + SW +++ F
Sbjct: 1177 MRWRVGSGESIRIWKDRWIPSPSTYKIMSPIRHLDENASVDSLINLHSMSWNVPLLQEVF 1236
Query: 61 CLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKM 120
D E+I IPL + +D+++ KG F+VK+AY++ + S A S++ M
Sbjct: 1237 LPRDVELITQIPLSVRRPRDTLIWSGTKKGIFTVKSAYYMLLHQSSAGEAGSSSSRELSM 1296
Query: 121 LWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
WK LWS +VAPK K+ WRA +N + T+ + KG+ C +C ++AET+DHVLW
Sbjct: 1297 FWKNLWSTQVAPKVKLFAWRACRNIVPTKTKLFEKGLTATSSCSWCMEEAETIDHVLW 1354
BLAST of Lcy08g008250 vs. ExPASy TrEMBL
Match:
A0A2N9J6I3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60908 PE=4 SV=1)
HSP 1 Score: 127.5 bits (319), Expect = 8.6e-26
Identity = 66/180 (36.67%), Postives = 99/180 (55.00%), Query Frame = 0
Query: 1 MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAA-SLIDANG-SWKEIEIRDSF 60
MRWRVG+G I I + W+P YK R N + SLI+ + SW +++ F
Sbjct: 1384 MRWRVGSGESIRIWKDRWIPSPSTYKIMSPIRHLDENASVDSLINLHSMSWNVPLLQEVF 1443
Query: 61 CLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKM 120
D E+I IPL + +D+++ KG F+VK+AY++ + S A S++
Sbjct: 1444 LPRDVELITQIPLSVRRPRDTLIWSGTKKGIFTVKSAYYMLLHQSSAGEAGSSSSRELST 1503
Query: 121 LWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLWEY 179
WK LWS +VAPK K+ WRA +N + T+ + KG+ C +C ++AET+DHVLW Y
Sbjct: 1504 FWKNLWSTQVAPKVKLFAWRACRNIVPTKTKLFEKGLTATFTCSWCMEEAETIDHVLWGY 1563
BLAST of Lcy08g008250 vs. ExPASy TrEMBL
Match:
A0A2N9J5D9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59443 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 1.1e-25
Identity = 65/178 (36.52%), Postives = 100/178 (56.18%), Query Frame = 0
Query: 1 MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAA-SLIDANG-SWKEIEIRDSF 60
MRWRVG+G I I + W+P + YK R N + SLI+ + SW +++ F
Sbjct: 1205 MRWRVGSGESIRIWKDRWIPSSSTYKIMSPIRHLDENASVDSLINFHSMSWNVPLLQEVF 1264
Query: 61 CLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKM 120
+ E+I IPL + +D+++ KG F+VK+AY++ + S A S++ M
Sbjct: 1265 LPRNVELITQIPLSVRRPRDTLIWSGTKKGIFTVKSAYYMLLHQSSAGEAGSSSSRELSM 1324
Query: 121 LWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
WK LWS +VAPK K+ WRA +N + T+ + KG+ C +C ++AET+DHVLW
Sbjct: 1325 FWKNLWSTQVAPKVKLFAWRACRNIVPTKTKLFEKGLTATSSCSWCMEEAETIDHVLW 1382
BLAST of Lcy08g008250 vs. ExPASy TrEMBL
Match:
A0A2N9GTH6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30533 PE=4 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 5.6e-25
Identity = 69/179 (38.55%), Postives = 93/179 (51.96%), Query Frame = 0
Query: 1 MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGN-RAASLIDANG-SWKEIEIRDSF 60
MRWRVG+G I I + WLP Y+ R N + +LID SWK E+ F
Sbjct: 234 MRWRVGSGENIKIWKDPWLPCPTTYRVISPFRGLDENAKVDALIDRETMSWKVSELERIF 293
Query: 61 CLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYN-LSRAEIESPSNNAGTK 120
D E IL IPL + D ++ + KG F+VK+AY L + S+ E S +
Sbjct: 294 IPRDVEAILQIPLSKRRPNDMMIWAVTMKGNFTVKSAYQLLRSQQSQHEPTMSSTSVQNT 353
Query: 121 MLWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
LW ++W +V PK KM WRA +N L TQ N+ +G+ C +C +AET DHVLW
Sbjct: 354 KLWNRIWKARVQPKVKMFIWRACKNILPTQTNLFDRGVTQTFSCHWCEDEAETTDHVLW 412
BLAST of Lcy08g008250 vs. ExPASy TrEMBL
Match:
A0A2N9IE72 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50326 PE=4 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 5.6e-25
Identity = 69/179 (38.55%), Postives = 93/179 (51.96%), Query Frame = 0
Query: 1 MRWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGN-RAASLIDANG-SWKEIEIRDSF 60
MRWRVG+G I I + WLP Y+ R N + +LID SWK E+ F
Sbjct: 175 MRWRVGSGENIKIWKDPWLPCPTTYRVISPFRGLDENAKVDALIDRETMSWKVSELERIF 234
Query: 61 CLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYN-LSRAEIESPSNNAGTK 120
D E IL IPL + D ++ + KG F+VK+AY L + S+ E S +
Sbjct: 235 IPRDVEAILQIPLSKRRPNDMMIWAVTMKGNFTVKSAYQLLRSQQSQHEPTMSSTSVQNT 294
Query: 121 MLWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
LW ++W +V PK KM WRA +N L TQ N+ +G+ C +C +AET DHVLW
Sbjct: 295 KLWNRIWKARVQPKVKMFIWRACKNILPTQTNLFDRGVTQTFSCHWCEDEAETTDHVLW 353
BLAST of Lcy08g008250 vs. NCBI nr
Match:
XP_042942883.1 (uncharacterized protein LOC122277065 [Carya illinoinensis])
HSP 1 Score: 124.0 bits (310), Expect = 2.0e-24
Identity = 69/176 (39.20%), Postives = 97/176 (55.11%), Query Frame = 0
Query: 3 WRVGNGNLISIKDESWLPKTGNYKPTWVKRECWG-NRAASLID-ANGSWKEIEIRDSFCL 62
WRVG+G+ I I + WL KT K T R G A LID SWK +++ F
Sbjct: 792 WRVGSGDKIHIWTDKWLAKTKPTKVTSPVRVLDGLATVAELIDPTTRSWKTELVKEIFEE 851
Query: 63 ADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKMLW 122
+AEVIL P+ S ++D ++ G FSV++AYH+ + A+ S + K +W
Sbjct: 852 GEAEVILQTPVSSMNSRDRLIWHGTKGGSFSVRSAYHMEKDREMADKGQASTSKCLKGVW 911
Query: 123 KKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
KLW + AP EKM WRA Q+SL TQ N+ + I ++PLC C ++ E+ HVLW
Sbjct: 912 NKLWHIRTAPSEKMFLWRACQDSLPTQLNLFKRKIASDPLCPLCCREEESTMHVLW 967
BLAST of Lcy08g008250 vs. NCBI nr
Match:
EEC84030.1 (hypothetical protein OsI_30257 [Oryza sativa Indica Group])
HSP 1 Score: 123.6 bits (309), Expect = 2.6e-24
Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = 0
Query: 3 WRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAASLIDANGSWKEIEIRDSFCLAD 62
W +GNG + + + W+P++ + +P KR C + LID +GSW +I F D
Sbjct: 60 WHIGNGKSVKLWRDPWIPRSYSRRPISAKRNCRLRWVSDLIDRSGSWDTDKISHHFLPMD 119
Query: 63 AEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKMLWKK 122
E IL+I L S+ +D I D GRFSV++AYHLA L++ + S S+ G+ W
Sbjct: 120 VEAILNIRLSSRLEEDFIAWHPDRLGRFSVRSAYHLAVALAQVDDGSSSSGNGSSRAWNA 179
Query: 123 LWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
LW K K+ WRA+ NSL+T N + ++ + +C C ++E V H L+
Sbjct: 180 LWKCNAPQKVKIFAWRAITNSLTTLENKKKRKLEVSDICTICGVESEYVVHALF 233
BLAST of Lcy08g008250 vs. NCBI nr
Match:
XP_035551723.1 (uncharacterized protein LOC118349891 [Juglans regia])
HSP 1 Score: 122.9 bits (307), Expect = 4.4e-24
Identity = 71/216 (32.87%), Postives = 109/216 (50.46%), Query Frame = 0
Query: 1 MRWRVGNGNLISIKDESWLPKTGNYK---PTWVKRECWGNRAASLIDANGSWKEIEIRDS 60
+RWRVG+G I+I + WLP +++ P + C + + + W E I+
Sbjct: 738 LRWRVGDGQNINIWGQRWLPTPSSFRVQSPNPLLNTCVLVKDL-MFEGRKVWNEGFIKSI 797
Query: 61 FCLADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTK 120
F +A++I+SIPL ++ D ++ KG FSVK+AYHL + SR I S G
Sbjct: 798 FSKEEADMIISIPLSKRDVDDRMIWGPSKKGIFSVKSAYHLEESRSRVSIGESSEQNGLG 857
Query: 121 MLWKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLWE 180
LWK +W + K W+A N L+T+ N+ K I + C C ++ ETV HVLW+
Sbjct: 858 KLWKSIWGLNIPGSTKSFLWKAGNNLLATRKNLRSKRIVEDSRCPICLQEEETVLHVLWQ 917
Query: 181 -------YSNSIIRSVRSRVGEKDYLRTSSISDQRL 207
+S S+I + RVGE D L + ++L
Sbjct: 918 CPAANDVWSGSVISVQKWRVGEGDLLGLLEVLTEKL 952
BLAST of Lcy08g008250 vs. NCBI nr
Match:
KAG8387873.1 (hypothetical protein BUALT_Bualt02G0066800 [Buddleja alternifolia])
HSP 1 Score: 122.5 bits (306), Expect = 5.7e-24
Identity = 83/283 (29.33%), Postives = 129/283 (45.58%), Query Frame = 0
Query: 2 RWRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGN-RAASLIDANGSWKEIEIRDS-FC 61
RWRVGNG I+I + WLP T +K T R N + SLI+ N W + ++ D FC
Sbjct: 80 RWRVGNGEDIAIWFDPWLPSTSGFKITTRNRLLPMNAKVNSLINPNTGWWDSDLIDRVFC 139
Query: 62 LADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKML 121
DA +I +IPLGS +D ++ G F+V++AYHLA ++ R S SN +
Sbjct: 140 PEDASIIKTIPLGSNNNRDRLIWNFSSSGFFAVRSAYHLAKDIDRRRAASSSNPKPPSLS 199
Query: 122 WKKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHV----- 181
W+ +W +V PK ++ W+A +++L T N++ + ++ C C + E + HV
Sbjct: 200 WQFIWKTRVPPKIRVFAWKACKDALPTAANLLNRRVEVYAGCQHCESEREDLQHVLRCCP 259
Query: 182 ----LWEY---------SNSIIRSVRSRVGEKDYLRTSSI----------SDQRLENRSS 241
LW NS + +V E + + S+ + Q NR +
Sbjct: 260 FSRQLWALMGLPHHTISRNSETIELNQKVMENNNIHMESLITMIQSFHMTAHQIEPNRGA 319
Query: 242 HRV------WAPPPPNVWKINL------MPPSRKITVVEEDQE 243
+ W+PP P KIN P S + V+ D E
Sbjct: 320 QIIDTTVMHWSPPAPGWLKINFDGANFSEPKSIGLGVIARDSE 362
BLAST of Lcy08g008250 vs. NCBI nr
Match:
EEC72938.1 (hypothetical protein OsI_06800 [Oryza sativa Indica Group])
HSP 1 Score: 122.1 bits (305), Expect = 7.5e-24
Identity = 62/174 (35.63%), Postives = 92/174 (52.87%), Query Frame = 0
Query: 3 WRVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAASLIDANGSWKEIEIRDSFCLAD 62
WR+GNG + + + W+P++ + +P KR C + LID + SW +I F D
Sbjct: 331 WRIGNGKSVRLWRDPWIPRSFSRRPISAKRNCRLRWVSDLIDQSESWDTDKISQHFLPMD 390
Query: 63 AEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKMLWKK 122
AE IL+I L S+ D I D GRFSV++AYHLA L++ + S S+ G W
Sbjct: 391 AEAILNIRLSSRLEDDFIAWHPDRLGRFSVRSAYHLAIALAQVDEGSSSSGNGNSRAWNA 450
Query: 123 LWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
LW K K+ WRA+ NSL T N + ++ + +C C ++E V H L+
Sbjct: 451 LWKCNAPQKVKIFAWRAITNSLPTLENKKKRKLEVSDICTICGVESEYVVHALF 504
BLAST of Lcy08g008250 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 64.3 bits (155), Expect = 1.7e-10
Identity = 50/211 (23.70%), Postives = 98/211 (46.45%), Query Frame = 0
Query: 4 RVGNGNLISIKDESWLPKTGNYKPTWVKRECWGNRAASLIDANGS---WKEIEIRDSFCL 63
R+G N++ +S P+ N + T+ +E N +L + GS W + +I
Sbjct: 49 RIGLDNIV----DSHPPRPLNTEETY--KEMTIN---NLFERKGSYYFWDDSKISQFVDQ 108
Query: 64 ADAEVILSIPLGSKETKDSILSCLDPKGRFSVKNAYHLAYNLSRAEIESPSNNAGTKMLW 123
+D I I L + D I+ + G ++V++ Y L + I + + G+ L
Sbjct: 109 SDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLK 168
Query: 124 KKLWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLWEYSN 183
++W+ + PK K WRAL +L+T + +G+ +P C C ++ E+++H L+
Sbjct: 169 TRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALF---T 228
Query: 184 SIIRSVRSRVGEKDYLRTSSISDQRLENRSS 212
++ R+ + +R +S+ EN S+
Sbjct: 229 CPFATMAWRLSDSSLIRNQLMSNDFEENISN 247
BLAST of Lcy08g008250 vs. TAIR 10
Match:
AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 49.7 bits (117), Expect = 4.4e-06
Identity = 20/54 (37.04%), Postives = 32/54 (59.26%), Query Frame = 0
Query: 123 LWSFKVAPKEKMCTWRALQNSLSTQNNIIFKGIDTNPLCFFCRKKAETVDHVLW 177
+WS K++PK K+ W+AL N+L ++ + I P C CR ET+ H+L+
Sbjct: 9 IWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCR-DFETITHILF 61
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2N9FYH3 | 3.9e-26 | 37.08 | CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2022... | [more] |
A0A2N9J6I3 | 8.6e-26 | 36.67 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60908 PE=4 SV=1 | [more] |
A0A2N9J5D9 | 1.1e-25 | 36.52 | CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5944... | [more] |
A0A2N9GTH6 | 5.6e-25 | 38.55 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30533 PE=4 SV=1 | [more] |
A0A2N9IE72 | 5.6e-25 | 38.55 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50326 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_042942883.1 | 2.0e-24 | 39.20 | uncharacterized protein LOC122277065 [Carya illinoinensis] | [more] |
EEC84030.1 | 2.6e-24 | 35.06 | hypothetical protein OsI_30257 [Oryza sativa Indica Group] | [more] |
XP_035551723.1 | 4.4e-24 | 32.87 | uncharacterized protein LOC118349891 [Juglans regia] | [more] |
KAG8387873.1 | 5.7e-24 | 29.33 | hypothetical protein BUALT_Bualt02G0066800 [Buddleja alternifolia] | [more] |
EEC72938.1 | 7.5e-24 | 35.63 | hypothetical protein OsI_06800 [Oryza sativa Indica Group] | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 1.7e-10 | 23.70 | Ribonuclease H-like superfamily protein | [more] |
AT3G26855.1 | 4.4e-06 | 37.04 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |