Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATTTGGTGGCAATTGGAATGAGAGGAACAATTATGTTGACTACAGCGTTTCTGAAATTATGATGCAACCGAGAATGTCATTCCAGAAATTGATGGACAATGTAATGTTACAGTTAGGAATTTCAGGTAATTATGATTGTCTGGATTTATTTGCTAGCATAGGGCCACAATCTTTCATAGAAAAGGGTATGAAATTGGGGGATGATCGAGATGTAAGTTGGTTTTTCAACACAATGTCCAATGGTTCATCCAATTGTTGTTCATTAGTAGTAGATTATAGAAATAGCCTATCGATCATATTGGATAACATGCTTCTCCAAGATTCTAGCACCAGTTCCTTACAAACTCAAGGTTGATTTCATCAAAATATTGATGTTGCAAAAATTAAGGACGATTTTCATATAAGCGTGGATTACATGTTTAATGGGAAGATTAATTTACAGAATGCATTGCGTTCCATTGCATTAGGGGACAACTTTCAGTACAAAACTGTAAAATCCAATCATGAGAAGTTGGTTGTCAGATGTGTTGTCGAAAATTGCAGTTGGGTTATTCGTGCATATCGATACGGGGATGAAAAAAGTGAAACATGGATTGTCAAGAAGTTAGTTCATGATCATACATGCTCTCTAGACGTTGTATTGAATGATCATAAACAAGCAACAACCTCTGTGATTAAAGAATGTATCAAAAGCAAAATGTCCATCACTGGTAGTGAATTGAAAACTCCGAAGGATATTGTGGCATACATTCGTTCAAAATTTGACATCCACATTAGTTACCAAAAAGCGTGGCGTGCCCGTGAAGCAACTCTTAATGAAATTAGAGGATCACTTGCAGATTCTTATTCCAAGATCCCTTCATTTTGCAATATGCTGAAGCTAAAAAATCCAGGTACTTTTTATATATACCGAAGTATATGTTCTAATCTTGGTATTATACAACGATTTAAATAAACACCCAGTATACATCATATAATGTAGGTACTTTTTTATATATATTGTATTATATGTTCTAATTTATATATTTATATCATAAACTGCAGGTACATTTTCTACACACAAACTCGACGTAGATGGAAGATTTTTGTACTTTTTTATGTCACTCTCTGCTTCAATTTCTGGACGGAAGCATTGTAGACCTGTTATCTCGGTTGATGGCACTTTCTTAAAGAATAAGTTCGCTGGTTATTTATTGACTGTCGTATCTATTGATGGAAATGACCAGATATTCCCATTGGGTTGTGCAATAGTTGATTCAGAGAATGATTTATCATGGAAATGGTTTTTTTGTTCAACTAAAGGCGGCCATTAG
mRNA sequence
ATGCTATTTGGTGGCAATTGGAATGAGAGGAACAATTATGTTGACTACAGCGTTTCTGAAATTATGATGCAACCGAGAATGTCATTCCAGAAATTGATGGACAATGTAATGTTACAGTTAGGAATTTCAGGTAATTATGATTGTCTGGATTTATTTGCTAGCATAGGGCCACAATCTTTCATAGAAAAGGGTATGAAATTGGGGGATGATCGAGATAATGCATTGCGTTCCATTGCATTAGGGGACAACTTTCAGTACAAAACTGTAAAATCCAATCATGAGAAGTTGGTTGTCAGATGTGTTGTCGAAAATTGCAGTTGGGTTATTCGTGCATATCGATACGGGGATGAAAAAAGTGAAACATGGATTGTCAAGAAGTTAGTTCATGATCATACATGCTCTCTAGACGTTGTATTGAATGATCATAAACAAGCAACAACCTCTGTGATTAAAGAATGTATCAAAAGCAAAATGTCCATCACTGGTAGTGAATTGAAAACTCCGAAGGATATTGTGGCATACATTCGTTCAAAATTTGACATCCACATTAGTTACCAAAAAGCGTGGCGTGCCCGTGAAGCAACTCTTAATGAAATTAGAGGATCACTTGCAGATTCTTATTCCAAGATCCCTTCATTTTGCAATATGCTGAAGCTAAAAAATCCAGGTACATTTTCTACACACAAACTCGACGTAGATGGAAGATTTTTGTACTTTTTTATGTCACTCTCTGCTTCAATTTCTGGACGGAAGCATTGTAGACCTGTTATCTCGGTTGATGGCACTTTCTTAAAGAATAAGTTCGCTGGTTATTTATTGACTGTCGTATCTATTGATGGAAATGACCAGATATTCCCATTGGGTTGTGCAATAGTTGATTCAGAGAATGATTTATCATGGAAATGGTTTTTTTGTTCAACTAAAGGCGGCCATTAG
Coding sequence (CDS)
ATGCTATTTGGTGGCAATTGGAATGAGAGGAACAATTATGTTGACTACAGCGTTTCTGAAATTATGATGCAACCGAGAATGTCATTCCAGAAATTGATGGACAATGTAATGTTACAGTTAGGAATTTCAGGTAATTATGATTGTCTGGATTTATTTGCTAGCATAGGGCCACAATCTTTCATAGAAAAGGGTATGAAATTGGGGGATGATCGAGATAATGCATTGCGTTCCATTGCATTAGGGGACAACTTTCAGTACAAAACTGTAAAATCCAATCATGAGAAGTTGGTTGTCAGATGTGTTGTCGAAAATTGCAGTTGGGTTATTCGTGCATATCGATACGGGGATGAAAAAAGTGAAACATGGATTGTCAAGAAGTTAGTTCATGATCATACATGCTCTCTAGACGTTGTATTGAATGATCATAAACAAGCAACAACCTCTGTGATTAAAGAATGTATCAAAAGCAAAATGTCCATCACTGGTAGTGAATTGAAAACTCCGAAGGATATTGTGGCATACATTCGTTCAAAATTTGACATCCACATTAGTTACCAAAAAGCGTGGCGTGCCCGTGAAGCAACTCTTAATGAAATTAGAGGATCACTTGCAGATTCTTATTCCAAGATCCCTTCATTTTGCAATATGCTGAAGCTAAAAAATCCAGGTACATTTTCTACACACAAACTCGACGTAGATGGAAGATTTTTGTACTTTTTTATGTCACTCTCTGCTTCAATTTCTGGACGGAAGCATTGTAGACCTGTTATCTCGGTTGATGGCACTTTCTTAAAGAATAAGTTCGCTGGTTATTTATTGACTGTCGTATCTATTGATGGAAATGACCAGATATTCCCATTGGGTTGTGCAATAGTTGATTCAGAGAATGATTTATCATGGAAATGGTTTTTTTGTTCAACTAAAGGCGGCCATTAG
Protein sequence
MLFGGNWNERNNYVDYSVSEIMMQPRMSFQKLMDNVMLQLGISGNYDCLDLFASIGPQSFIEKGMKLGDDRDNALRSIALGDNFQYKTVKSNHEKLVVRCVVENCSWVIRAYRYGDEKSETWIVKKLVHDHTCSLDVVLNDHKQATTSVIKECIKSKMSITGSELKTPKDIVAYIRSKFDIHISYQKAWRAREATLNEIRGSLADSYSKIPSFCNMLKLKNPGTFSTHKLDVDGRFLYFFMSLSASISGRKHCRPVISVDGTFLKNKFAGYLLTVVSIDGNDQIFPLGCAIVDSENDLSWKWFFCSTKGGH
Homology
BLAST of Lcy08g007850 vs. ExPASy TrEMBL
Match:
A0A6J1C328 (uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006994 PE=4 SV=1)
HSP 1 Score: 277.3 bits (708), Expect = 7.7e-71
Identity = 127/232 (54.74%), Postives = 170/232 (73.28%), Query Frame = 0
Query: 73 NALRSIALGDNFQYKTVKSNHEKLVVRCVVENCSWVIRAYRYGDEKSETWIVKKLVHDHT 132
NALRS+A+ NF ++TVKSN E L+V C+ NC W + A ++GD+ SE WIVKK VH+HT
Sbjct: 126 NALRSVAIRXNFXFRTVKSNREVLIVXCLTNNCQWFLHASKFGDKGSEIWIVKKFVHEHT 185
Query: 133 CSLDVVLNDHKQATTSVIKECIKSKMSITGSELKTPKDIVAYIRSKFDIHISYQKAWRAR 192
CSL++VLNDH+QAT SVIKE IK +++ G++L + KD ++++ + I I+YQKA AR
Sbjct: 186 CSLEIVLNDHRQATFSVIKEFIKGRINXXGTDLPSVKDXISHVHRELXISINYQKAXXAR 245
Query: 193 EATLNEIRGSLADSYSKIPSFCNMLKLKNPGTFSTHKLDVDGRFLYFFMSLSASISGRKH 252
E + EIRGS SY+ IP FC+M+K KNPG+ K D +GRF Y FM+ S+SISG K+
Sbjct: 246 EXAIKEIRGSPEXSYALIPXFCHMIKXKNPGSVCDFKXDNNGRFEYLFMAXSSSISGWKY 305
Query: 253 CRPVISVDGTFLKNKFAGYLLTVVSIDGNDQIFPLGCAIVDSENDLSWKWFF 305
C PVISVDGT +KNK+AG L++ ++D N QIFPL ++ DSEND SW FF
Sbjct: 306 CXPVISVDGTSMKNKYAGTLISACTLDANHQIFPLAFSVXDSENDASWVXFF 357
BLAST of Lcy08g007850 vs. ExPASy TrEMBL
Match:
A0A6J1DNQ8 (uncharacterized protein LOC111022347 OS=Momordica charantia OX=3673 GN=LOC111022347 PE=4 SV=1)
HSP 1 Score: 260.8 bits (665), Expect = 7.4e-66
Identity = 131/335 (39.10%), Postives = 194/335 (57.91%), Query Frame = 0
Query: 1 MLFGGNWNERNNYVDYSVSEIMMQPRMSFQKLMDNVMLQLGISGNYDCLDLFASIGPQSF 60
M GG WN+R+NYV+Y VSE+++ MS+ KL+ ++M QLG+ G+ D D+F+ IG F
Sbjct: 3 MFHGGFWNDRDNYVEYKVSELIIHQEMSYAKLLKDIMEQLGLVGSSDYPDIFSCIGTTQF 62
Query: 61 IEKGMKLGDDRD------------------------------------------------ 120
+ K MK+ DD+D
Sbjct: 63 M-KDMKISDDKDVHWLYNVIFNGVAQCCSLVVDCRNCLSNVLDRMPINTSSSIDNGIPSI 122
Query: 121 -------------------------------NALRSIALGDNFQYKTVKSNHEKLVVRCV 180
NALRS+A+ DNFQ++T+KSN + L+VR
Sbjct: 123 GQFHYSIDVTNILRNFHIEVNDKFCGKKNLQNALRSVAIRDNFQFRTIKSNRDVLIVRFF 182
Query: 181 VENCSWVIRAYRYGDEKSETWIVKKLVHDHTCSLDVVLNDHKQATTSVIKECIKSKMSIT 240
++NC W + A ++GD+ SE WIVKK V +HTCSL++VLNDH+QAT SVIKE IK + ++
Sbjct: 183 MDNCQWYLHASKFGDQGSEIWIVKKFVQEHTCSLEIVLNDHRQATFSVIKEFIKDRTNMF 242
Query: 241 GSELKTPKDIVAYIRSKFDIHISYQKAWRAREATLNEIRGSLADSYSKIPSFCNMLKLKN 257
G++L + KD+++++R I I+YQKAWR R++ + EI+GS +SY+ +PSFC+M+K+KN
Sbjct: 243 GTDLLSVKDVISHVRRGLGISINYQKAWRVRKSAIKEIKGSPEESYALVPSFCHMIKVKN 302
BLAST of Lcy08g007850 vs. ExPASy TrEMBL
Match:
A0A5A7TCZ3 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00480 PE=4 SV=1)
HSP 1 Score: 248.8 bits (634), Expect = 2.9e-62
Identity = 118/229 (51.53%), Postives = 161/229 (70.31%), Query Frame = 0
Query: 75 LRSIALGDNFQYKTVKSNHEKLVVRCVVENCSWVIRAYRYGDEKSETWIVKKLVHDHTCS 134
+++I L DNFQY VKSN E ++++C +ENC W +RA W++ + +HT S
Sbjct: 26 IQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGDRSLWVLTRFDFEHTYS 85
Query: 135 LDVVLNDHKQATTSVIKECIKSKMSITGSELKTPKDIVAYIRSKFDIHISYQKAWRAREA 194
+DV L DH+QAT +VIK+ IK+K+S+ GS+L TPK+IV +I + + ISYQKAWRA +
Sbjct: 86 VDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPKNIVHFICDEHGLSISYQKAWRACKV 145
Query: 195 TLNEIRGSLADSYSKIPSFCNMLKLKNPGTFSTHKLDVDGRFLYFFMSLSASISGRKHCR 254
L++IRGSL DSY +P F +L+L N G+ +K+D D RFLYFFM+LSASISG +HC
Sbjct: 146 ALDDIRGSLEDSYKMLPRFAYILELNNLGSVVEYKVDADDRFLYFFMALSASISGWQHCC 205
Query: 255 PVISVDGTFLKNKFAGYLLTVVSIDGNDQIFPLGCAIVDSENDLSWKWF 304
VI +DGT LKNK+ G LL+ ++D N QIFPL +VDS+ND SW WF
Sbjct: 206 LVIFIDGTSLKNKYGGTLLSSSTLDANYQIFPLAFCVVDSKNDSSWTWF 254
BLAST of Lcy08g007850 vs. ExPASy TrEMBL
Match:
A0A1S3CIV7 (uncharacterized protein LOC103501336 OS=Cucumis melo OX=3656 GN=LOC103501336 PE=4 SV=1)
HSP 1 Score: 248.8 bits (634), Expect = 2.9e-62
Identity = 118/229 (51.53%), Postives = 161/229 (70.31%), Query Frame = 0
Query: 75 LRSIALGDNFQYKTVKSNHEKLVVRCVVENCSWVIRAYRYGDEKSETWIVKKLVHDHTCS 134
+++I L DNFQY VKSN E ++++C +ENC W +RA W++ + +HT S
Sbjct: 26 IQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGDRSLWVLTRFDFEHTYS 85
Query: 135 LDVVLNDHKQATTSVIKECIKSKMSITGSELKTPKDIVAYIRSKFDIHISYQKAWRAREA 194
+DV L DH+QAT +VIK+ IK+K+S+ GS+L TPK+IV +I + + ISYQKAWRA +
Sbjct: 86 VDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPKNIVHFICDEHGLSISYQKAWRACKV 145
Query: 195 TLNEIRGSLADSYSKIPSFCNMLKLKNPGTFSTHKLDVDGRFLYFFMSLSASISGRKHCR 254
L++IRGSL DSY +P F +L+L N G+ +K+D D RFLYFFM+LSASISG +HC
Sbjct: 146 ALDDIRGSLEDSYKMLPRFAYILELNNLGSVVEYKVDADDRFLYFFMALSASISGWQHCC 205
Query: 255 PVISVDGTFLKNKFAGYLLTVVSIDGNDQIFPLGCAIVDSENDLSWKWF 304
VI +DGT LKNK+ G LL+ ++D N QIFPL +VDS+ND SW WF
Sbjct: 206 LVIFIDGTSLKNKYGGTLLSSSTLDANYQIFPLAFCVVDSKNDSSWTWF 254
BLAST of Lcy08g007850 vs. ExPASy TrEMBL
Match:
A0A5D3DJR8 (MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold162G00300 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 1.0e-59
Identity = 109/231 (47.19%), Postives = 160/231 (69.26%), Query Frame = 0
Query: 78 IALGDNFQYKTVKSNHEKLVVRCVVENCSWVIRAYRYGDEKSETWIVKKLVHDHTCSLDV 137
IA+ +NF++KTV+SN + + +C +NC W +RA RY + E W ++K + +H CS++V
Sbjct: 172 IAIKNNFEFKTVRSNSKSIEFKCSQDNCPWYVRASRY--KGGELWRLRKYIANHNCSINV 231
Query: 138 VLNDHKQATTSVIKECIKSKMSITGSELKTPKDIVAYIRSKFDIHISYQKAWRAREATLN 197
+ HKQA++S+I +CI S + TP DI+ ++R+K +++SY KAWRA+E +N
Sbjct: 232 IQTTHKQASSSLISDCIGKDFS--SFDRSTPNDIMIHMRTKLGVNVSYYKAWRAKELVMN 291
Query: 198 EIRGSLADSYSKIPSFCNMLKLKNPGTFSTHKLDVDGRFLYFFMSLSASISGRKHCRPVI 257
+ G +SY+ IP+F LK NPG+F+ ++ D +G F Y FM++ A I G K+CRP I
Sbjct: 292 SLNGEAKESYALIPNFFMKLKEINPGSFTAYETDTEGHFKYCFMAIGACIEGWKYCRPNI 351
Query: 258 SVDGTFLKNKFAGYLLTVVSIDGNDQIFPLGCAIVDSENDLSWKWFFCSTK 309
SVDGTFLK+K+ G LLT +IDGN+QIFPL +IVDSEND SW+WFF + K
Sbjct: 352 SVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFFENIK 398
BLAST of Lcy08g007850 vs. NCBI nr
Match:
XP_022134813.1 (uncharacterized protein LOC111006994 [Momordica charantia])
HSP 1 Score: 277.3 bits (708), Expect = 1.6e-70
Identity = 127/232 (54.74%), Postives = 170/232 (73.28%), Query Frame = 0
Query: 73 NALRSIALGDNFQYKTVKSNHEKLVVRCVVENCSWVIRAYRYGDEKSETWIVKKLVHDHT 132
NALRS+A+ NF ++TVKSN E L+V C+ NC W + A ++GD+ SE WIVKK VH+HT
Sbjct: 126 NALRSVAIRXNFXFRTVKSNREVLIVXCLTNNCQWFLHASKFGDKGSEIWIVKKFVHEHT 185
Query: 133 CSLDVVLNDHKQATTSVIKECIKSKMSITGSELKTPKDIVAYIRSKFDIHISYQKAWRAR 192
CSL++VLNDH+QAT SVIKE IK +++ G++L + KD ++++ + I I+YQKA AR
Sbjct: 186 CSLEIVLNDHRQATFSVIKEFIKGRINXXGTDLPSVKDXISHVHRELXISINYQKAXXAR 245
Query: 193 EATLNEIRGSLADSYSKIPSFCNMLKLKNPGTFSTHKLDVDGRFLYFFMSLSASISGRKH 252
E + EIRGS SY+ IP FC+M+K KNPG+ K D +GRF Y FM+ S+SISG K+
Sbjct: 246 EXAIKEIRGSPEXSYALIPXFCHMIKXKNPGSVCDFKXDNNGRFZYJFMAXSSSISGWKY 305
Query: 253 CRPVISVDGTFLKNKFAGYLLTVVSIDGNDQIFPLGCAIVDSENDLSWKWFF 305
C PVISVDGT +KNK+AG L++ ++D N QIFPL ++ DSEND SW FF
Sbjct: 306 CXPVISVDGTSMKNKYAGTLISACTLDANHQIFPLAFSVXDSENDASWVXFF 357
BLAST of Lcy08g007850 vs. NCBI nr
Match:
XP_022155207.1 (uncharacterized protein LOC111022347 [Momordica charantia])
HSP 1 Score: 260.8 bits (665), Expect = 1.5e-65
Identity = 131/335 (39.10%), Postives = 194/335 (57.91%), Query Frame = 0
Query: 1 MLFGGNWNERNNYVDYSVSEIMMQPRMSFQKLMDNVMLQLGISGNYDCLDLFASIGPQSF 60
M GG WN+R+NYV+Y VSE+++ MS+ KL+ ++M QLG+ G+ D D+F+ IG F
Sbjct: 3 MFHGGFWNDRDNYVEYKVSELIIHQEMSYAKLLKDIMEQLGLVGSSDYPDIFSCIGTTQF 62
Query: 61 IEKGMKLGDDRD------------------------------------------------ 120
+ K MK+ DD+D
Sbjct: 63 M-KDMKISDDKDVHWLYNVIFNGVAQCCSLVVDCRNCLSNVLDRMPINTSSSIDNGIPSI 122
Query: 121 -------------------------------NALRSIALGDNFQYKTVKSNHEKLVVRCV 180
NALRS+A+ DNFQ++T+KSN + L+VR
Sbjct: 123 GQFHYSIDVTNILRNFHIEVNDKFCGKKNLQNALRSVAIRDNFQFRTIKSNRDVLIVRFF 182
Query: 181 VENCSWVIRAYRYGDEKSETWIVKKLVHDHTCSLDVVLNDHKQATTSVIKECIKSKMSIT 240
++NC W + A ++GD+ SE WIVKK V +HTCSL++VLNDH+QAT SVIKE IK + ++
Sbjct: 183 MDNCQWYLHASKFGDQGSEIWIVKKFVQEHTCSLEIVLNDHRQATFSVIKEFIKDRTNMF 242
Query: 241 GSELKTPKDIVAYIRSKFDIHISYQKAWRAREATLNEIRGSLADSYSKIPSFCNMLKLKN 257
G++L + KD+++++R I I+YQKAWR R++ + EI+GS +SY+ +PSFC+M+K+KN
Sbjct: 243 GTDLLSVKDVISHVRRGLGISINYQKAWRVRKSAIKEIKGSPEESYALVPSFCHMIKVKN 302
BLAST of Lcy08g007850 vs. NCBI nr
Match:
KAA0039149.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])
HSP 1 Score: 248.8 bits (634), Expect = 6.0e-62
Identity = 118/229 (51.53%), Postives = 161/229 (70.31%), Query Frame = 0
Query: 75 LRSIALGDNFQYKTVKSNHEKLVVRCVVENCSWVIRAYRYGDEKSETWIVKKLVHDHTCS 134
+++I L DNFQY VKSN E ++++C +ENC W +RA W++ + +HT S
Sbjct: 26 IQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGDRSLWVLTRFDFEHTYS 85
Query: 135 LDVVLNDHKQATTSVIKECIKSKMSITGSELKTPKDIVAYIRSKFDIHISYQKAWRAREA 194
+DV L DH+QAT +VIK+ IK+K+S+ GS+L TPK+IV +I + + ISYQKAWRA +
Sbjct: 86 VDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPKNIVHFICDEHGLSISYQKAWRACKV 145
Query: 195 TLNEIRGSLADSYSKIPSFCNMLKLKNPGTFSTHKLDVDGRFLYFFMSLSASISGRKHCR 254
L++IRGSL DSY +P F +L+L N G+ +K+D D RFLYFFM+LSASISG +HC
Sbjct: 146 ALDDIRGSLEDSYKMLPRFAYILELNNLGSVVEYKVDADDRFLYFFMALSASISGWQHCC 205
Query: 255 PVISVDGTFLKNKFAGYLLTVVSIDGNDQIFPLGCAIVDSENDLSWKWF 304
VI +DGT LKNK+ G LL+ ++D N QIFPL +VDS+ND SW WF
Sbjct: 206 LVIFIDGTSLKNKYGGTLLSSSTLDANYQIFPLAFCVVDSKNDSSWTWF 254
BLAST of Lcy08g007850 vs. NCBI nr
Match:
XP_008463110.1 (PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo])
HSP 1 Score: 248.8 bits (634), Expect = 6.0e-62
Identity = 118/229 (51.53%), Postives = 161/229 (70.31%), Query Frame = 0
Query: 75 LRSIALGDNFQYKTVKSNHEKLVVRCVVENCSWVIRAYRYGDEKSETWIVKKLVHDHTCS 134
+++I L DNFQY VKSN E ++++C +ENC W +RA W++ + +HT S
Sbjct: 26 IQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGDRSLWVLTRFDFEHTYS 85
Query: 135 LDVVLNDHKQATTSVIKECIKSKMSITGSELKTPKDIVAYIRSKFDIHISYQKAWRAREA 194
+DV L DH+QAT +VIK+ IK+K+S+ GS+L TPK+IV +I + + ISYQKAWRA +
Sbjct: 86 VDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPKNIVHFICDEHGLSISYQKAWRACKV 145
Query: 195 TLNEIRGSLADSYSKIPSFCNMLKLKNPGTFSTHKLDVDGRFLYFFMSLSASISGRKHCR 254
L++IRGSL DSY +P F +L+L N G+ +K+D D RFLYFFM+LSASISG +HC
Sbjct: 146 ALDDIRGSLEDSYKMLPRFAYILELNNLGSVVEYKVDADDRFLYFFMALSASISGWQHCC 205
Query: 255 PVISVDGTFLKNKFAGYLLTVVSIDGNDQIFPLGCAIVDSENDLSWKWF 304
VI +DGT LKNK+ G LL+ ++D N QIFPL +VDS+ND SW WF
Sbjct: 206 LVIFIDGTSLKNKYGGTLLSSSTLDANYQIFPLAFCVVDSKNDSSWTWF 254
BLAST of Lcy08g007850 vs. NCBI nr
Match:
XP_038907134.1 (uncharacterized protein LOC120092945 [Benincasa hispida])
HSP 1 Score: 241.5 bits (615), Expect = 9.6e-60
Identity = 108/231 (46.75%), Postives = 159/231 (68.83%), Query Frame = 0
Query: 78 IALGDNFQYKTVKSNHEKLVVRCVVENCSWVIRAYRYGDEKSETWIVKKLVHDHTCSLDV 137
IA+ NF++KT++SN + RCV + C W +RA RY + S+ W+++K + H CS++
Sbjct: 164 IAVKKNFEFKTLRSNSRSIEFRCVQDGCQWYVRASRY--KASDLWMLRKFIDIHDCSMNN 223
Query: 138 VLNDHKQATTSVIKECIKSKMSITGSELKTPKDIVAYIRSKFDIHISYQKAWRAREATLN 197
V H+QA+ S+I +C+K++ + S+ TPKDIV +R + ++ISY KAWRA+E +
Sbjct: 224 VQTSHRQASASLIGDCLKNEFRSSSSDSLTPKDIVNKVRKELGVNISYYKAWRAKEHIMK 283
Query: 198 EIRGSLADSYSKIPSFCNMLKLKNPGTFSTHKLDVDGRFLYFFMSLSASISGRKHCRPVI 257
++G +SY+ IP F L+ NPGTF+ ++ D+DG F Y +M++ +SI G KHCRP I
Sbjct: 284 SLKGDACESYALIPKFLMKLEELNPGTFTAYETDIDGHFKYCYMAIGSSIEGWKHCRPNI 343
Query: 258 SVDGTFLKNKFAGYLLTVVSIDGNDQIFPLGCAIVDSENDLSWKWFFCSTK 309
VDGTFLK K+AG LLT ++DGN++ FPL +IVDSEND SWKWFF + K
Sbjct: 344 FVDGTFLKCKYAGTLLTASTVDGNNENFPLAFSIVDSENDASWKWFFENIK 392
BLAST of Lcy08g007850 vs. TAIR 10
Match:
AT1G64260.1 (MuDR family transposase )
HSP 1 Score: 73.9 bits (180), Expect = 2.5e-13
Identity = 53/220 (24.09%), Postives = 90/220 (40.91%), Query Frame = 0
Query: 90 KSNHEKLVVRCVVENCSWVIRAYRYGDEKSETWIVKKLVHDHTCSLDVVLNDHKQATTSV 149
++ E CV C W +RA R E+ + K HTCS + + +
Sbjct: 216 ETEKEMYTFECVRWKCKWSLRAARM--EEHGLVEITKYTGPHTCSHEYPNDFESEFAADE 275
Query: 150 IKECIKSKMSITGSELKTPKDIVAYIRSKFDIHISYQKAWRAREATLNEIRGSLADSYSK 209
I+ ++ + +++ +ELK + + K + K + + + G S+
Sbjct: 276 IERVVRIQPTLSIAELK------KWWKEKTGYELQTSKMRDGKLEVIKRVFGDEDQSFRV 335
Query: 210 IPSFCNMLKLKNPGTFSTHKLDV-----DGRFLYFFMSLSASISGRKHCRPVISVDGTFL 269
+P + N G + D+ F F S S SI G +HCRP+I VD L
Sbjct: 336 MPKLISAFHSSN-GLLVDWQYDLFPNPDFASFRGVFWSFSQSIEGFQHCRPLIVVDTKSL 395
Query: 270 KNKFAGYLLTVVSIDGNDQIFPLGCAIVDSENDLSWKWFF 305
K+ L+ +D ++ FPL A+ + SW+WFF
Sbjct: 396 NGKYQLKLMIASGVDAANKFFPLAFAVTKEVSTDSWRWFF 426
BLAST of Lcy08g007850 vs. TAIR 10
Match:
AT1G49920.1 (MuDR family transposase )
HSP 1 Score: 62.0 bits (149), Expect = 9.7e-10
Identity = 52/214 (24.30%), Postives = 88/214 (41.12%), Query Frame = 0
Query: 97 VVRCVVENCSWVIRAYRYGDEKSETWIVKKLVHDHTCSLDVVLNDHKQATTSVIKECIKS 156
VV C +C W I A R E+ + + + H C + + + + I+ ++
Sbjct: 218 VVECERWHCKWSICASR--REEDGLFEITECSGPHDCYPEHLNDFDAECIPFQIERVVRV 277
Query: 157 KMSITGSEL-KTPKDIVAYIRSKFDIHISYQKAWRAREATLNEIRGSLADSYSKIPSFCN 216
+ +++ +EL K + + + H S A+ + G S+ IP +
Sbjct: 278 QPTLSTAELDKWWEKKFGFALDQVVEHCSEGLVEDAKVKAIKRFFGDWDQSFRLIPKLMS 337
Query: 217 MLKLKNPGTFSTHKLD------VDGRFLYFFMSLSASISGRKHCRPVISVDGTFLKNKFA 276
+L N G + D F F + S SI G +HCRP+I VD L K+
Sbjct: 338 VLHSSN-GLLVDWQYDSLTHDPEHASFRGLFWAFSQSIQGFQHCRPLIVVDTKNLGGKYK 397
Query: 277 GYLLTVVSIDGNDQIFPLGCAIVDSENDLSWKWF 304
L+ + D +Q FPL A+ + SW+WF
Sbjct: 398 MKLMIASAFDATNQYFPLAFAVTKEVSVDSWRWF 428
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C328 | 7.7e-71 | 54.74 | uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
A0A6J1DNQ8 | 7.4e-66 | 39.10 | uncharacterized protein LOC111022347 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A5A7TCZ3 | 2.9e-62 | 51.53 | Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... | [more] |
A0A1S3CIV7 | 2.9e-62 | 51.53 | uncharacterized protein LOC103501336 OS=Cucumis melo OX=3656 GN=LOC103501336 PE=... | [more] |
A0A5D3DJR8 | 1.0e-59 | 47.19 | MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
XP_022134813.1 | 1.6e-70 | 54.74 | uncharacterized protein LOC111006994 [Momordica charantia] | [more] |
XP_022155207.1 | 1.5e-65 | 39.10 | uncharacterized protein LOC111022347 [Momordica charantia] | [more] |
KAA0039149.1 | 6.0e-62 | 51.53 | protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] | [more] |
XP_008463110.1 | 6.0e-62 | 51.53 | PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo] | [more] |
XP_038907134.1 | 9.6e-60 | 46.75 | uncharacterized protein LOC120092945 [Benincasa hispida] | [more] |