Lcy08g007560 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g007560
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	BEST Arabidopsis thaliana protein match is: reduced male fertility .
Location	Chr08: 9971916 .. 9979449 (-)
RNA-Seq Expression	Lcy08g007560
Synteny	Lcy08g007560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAAACAGAGCATTGCTTCAGCGCGAGACCGAGTGGTTACGAGATCTCAATCCATTGCTATGGAGCGTGAAAAGATTTCGAAGCGATCATCGCCAAATCCAGTTGTTGCTGTGGAGCCGGAAGGACTGGTAAAGCGAATGCGAAGAGATATTAAGCCCATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGTGCATTCCTCTGCTTCATCCTCTGCGTCTTCATCTTCGTACTGGTTCGTTCTCTTTCTCTTTTCTGTTTCCATCCTGATAATCGCTGTTCGTAGGTAATTTCAGTTCTGATACGAGTTTCGCGCGTAAAAACTTGTCTACCTGTTGAGGAGAATGCCTTTGTGTTTTCTAACGTATCGTGATAATGAAGAAATTCGATTTTGTTTTTCTAGAAGTGATTTGAATTACTTAGTTCAAAAATTGTGATGTGAAGTTATTTCCTCGACTTTAGGCTCTTTGAGCTCGATTGTGTAGTCGCAAATGTTTAGTACTGCCATGGACTTCGAAGTAGAAAGAAATGAATAATTCGAGTTGTTTTCTATGAGGTTCCGAAGCTAAAAGTGAAGGTCAGAAGAGTTGAATCTATGTCTATCGCAGCATAAACTTGTTCCTTCTTTTTCTCCATCAGGAGAAGACGAAGAAGAAGAAACGTTAAGTAATGTGATCTTAGGATTTGCAAATAGAATGTGACAATCTTTGTCGGAAATCACTACGAGTTGATAAACACTCACTGGATCTCTAAAAAATTTGATCGTCAGTACATTTTGTAGTATAAATAGTACTGCCAATTCTTCAGTATAGTTTTGAAGTGTTTATTTGTCACAGGATCGAAGTAGTTTCAGGACTCTTTCTATCTGAAGCTAGTTCAGTGTTTACATTTTTTACTTTTCATCGCATTAAGTATTCCGAGTCCGCTAGTTTTCTTTTTAATTTCATCTTTTACTTTTCTATGTTGATGTTTGATTCTACTTCTAAGATTTCGAAAATGTGATTGTTCTATCTTGTATACATTCAATTTTAAATCAGTTTTTAATTTAGTAACCGGAAGCTTTGTTTATTCAGCCATTAGGCTGACTTAAGTTTGGCGGGATTAAGATTGATGGATCATAGAGATTATACATTGTTTTTATCAATTTGAATATTTCAACGGCAACAAAGCTTTAACCTTCCGTATGAATTAATTTCCGCGAATGAACATGAAAGGTACGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATAATGCTTGCGGCGACTAGTCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAATATACGGCCTTCAAATGGATCAAACTCTACGTTTCTGCCTTCGGTAAGGATCGGGTTCGAGTTCTCCGAGTTGTGTTCCTGCTCTGGTGAATACATATTGCGTTTGCTTAACTATTCAATGACCCATGTTCCAGACGGAAGCCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGGTGAGTGATTGTGATTCCACTTGACTCCTTTAAGTAATTGGGCGTGGAGTTGTACTTAAAATTACAACTAAATGTCAAGGTCCTGTTTAGTCGAGGCTACTGTCTAATCTTGTTATCAATTTATCACGTCTTACCAAATAACTAAATATTCAAGTTTGATTCAACCATAAGTAAAGTCACAATAGAGGGTGGAAGCATTATAGGATTTATTATCTCGAGATTCCAAGGAACAGGTTCCCAAAGCAACTATACTGATACTTTCCATCCTCATGTATAAAATAGAGATATTTAGTGATACTGATTCCAATATACTAATTGAAATGTAGTTTGCTTCTTTACCATATTGTTTTTTGTTTTTTTTTTTTAATGAAACCAGATTGGATGCGGATTGGGGCATTTTTCCTGGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAAACTCCCAAATGAAAATCCCAAAACACGATTCAACGGATAACACATTGGAGTCCGGTTGTTGTGTCTTGCGCAATGTTAAAACTGGCATCTGGATAGCTGGTAGATTTAAGCTTGCTAAATTTTTTTGTCATTTTCTTTCAGTTGTTGTCATAGCTTGATACTCTCAGTAACCTTTTTCTATAAGTAAATTTATATTCTAAATGGACTGATGTGGCAGATCTACAACTTGTTCGTTGTCCCGTGTGCGACCTCAATACATGTGACGGTAGGCAACTCCAAGCGAACATTTAGTTTGCCACTAAAATGTAGGAACCTCTTTTTAATTCAATTGTCGCAAGAGTTTAGCCTGCCGTTATACCGTCCAAGTAATTGGTATGTCATACTATGTTTAAAAGCATTGAGGGATTCATAGGCTTATTCACTTCCAAATTTCATTGAAAATTCTTTTAATCTTGATTTCTAATACTTCAGGAAAGTGGATAATACTGAGCACACCCTAATCATCTGCTAATCAGCATGAGTTCATTGTTGATGAAAGGCTTTTAACTCATCCAAAGATGAATCCAATCTACACGCATCATTGAGAACCTAATCTGAAAAAAAAACTTGTAGTTTAAAATTGTAAACAGCAGATGTATATAGCTACAGAATTTTAAGTTACTTTTCTAGATCAACCATGTTTAGGGAGAACAATTTACATAAATCACCACTGTATGAAGAATATTGATCTACATTTGTTGGCTCTTGCTGACATTGCTACTATTATTATGTAGGAACAATGCAAACGTTGGATGCAAGACACATAGAGCTGTTCCTGAATGAAGGCTACCAAGATGGTAGTTGGGAATATCAGATTGTAGGTTTTCATGATATCAGGGAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGAAAGACTCTTCAACCTCTGGTATAACACAGCCTCCCTTTGCTGAAAAGTTACTGTCATATTATTATTGCTGGATGCTCCTGAAAACAATTCCCGTGAGATCTTTTCTTTCTGCACTATGGTTTATGCTTTAAGTTTAATAATTTAGGAACTACCCAGGAAAAGCATTTCTATTACACCAGATAACCCACTCAATGAAATTCTCGAATTATTTCTCCTTCTTAAAGAAATTACTGCACACTTTTAGCTGCAAATTGTATGACATGGAAGCATGCTTATTTTCTTTCTTTAGCTAAAATTTAAACTTACTTTATTGCCATTATATGGCGCAAGCTGTTTCAGCATCTGTTTTGAACATACTAAATTGCTGTATTTAGCTTAGCCAACACAAGATCTGAGTTCAAATTTCTGAAACCTCTGATAAGATTTTAGAGATTGAATGTTGTTATTCTACGACCGAAAAATATTGAGATACTTCGGGAGGTTTGATTATGAACTATATAATGAGATTAATCGCAAATGAATTGACAGGAATACTGGATCTGAAAACATGGACAGGAAATCGAACTGATTGGCAACCAAAGGCAATGGTTACTCTCAACGCGGTTGCTGTAAATACCTATTTACAAGACAATGAAGGTAAATGGCTTCCCACTCTTAGCATGAGTTTGATATGATATCCAAAACAGTGAAAAGTGCTTTTTAACCAATTCAACAGCTTTTTATAGATTTTTCATAGTTTTTGGTTACTAGGTCGATAGCAACATTGGAAATTCTAAACATACTTTAAATACTTCAATTAATTAGTATTCTTTTAAAAGTACCTCTAAAAATGTTTTACTTGAGCTAAACGAGCTTAGCTCAGCGGTAATTGACATGTACCCTTGACCATGAGGTCAGAGGTTCGAATCCCCCCACCCCCAAATGTTGATGTATTCAAAAAAAAAAAAAAAATGTTTTACTTGAAAAGTACTACATATGTTCTAGGAATGCTTTTAAAATAAGCGATTTTAATAAAAATAATTTGATTACCTGCACTTTAATATAAAGTGTTTGATGCAGATGTTAGGTTTACTTTTTAGTATTTCCTTAACAATCACTTTGGTCAAAAACATCTACAAATACTCTCACAAAGTCTTAGAATGCTTTTGACTTTTTTCCGAAGCACTTATAAATCACTTTCAAACTTGATGAATTTAAATGGAAAGTGATTTTAATCATGAGACATCGTTATTAGCCACCTCAAAAGCACTTCAAAGTACTTTCTGAGGAGACATTAGGATGCTTTTAGCTTTTTTCAAAAGCACTCTTAAACAAAGTCTTAACTTCCAATTTCTTCTAACTTGCCATATTAATATTATTAGCATAGTGTAGTGTTTGATTGAGATTGAGGTCTGATTTTGTATGGCGCAGGAGTTCATGTGAAATACCAGGCCATGAGAGCCGGAGTAAATGGAGAGGTGGTTTCAATCAGAATCTCTCAGCAGCTTCTCTAGTTCCTTCTTCAAATGCCCTCCCTTTATTATTCCTTCTCGTAACACCGGACTTTATTTTTTTCTTTTTAGTCCAACAATTGTGGGATGGGAGATCGAACCATCCACCCACCAAAAAAAAAAAAAATTACAAAACCAAACAAAACAAATAACCAATTTCTAAAAATAGATTCATTGTAAGAGTTCATTTCATTAAGTGTTTTTTTTTTTTTTTTGAGTTCTCATTTCATTAAGAAGTTATGTTTAGAAAAAAAAATCTCTACTTTTTAAAATTGAAATCATTTTCTATGTTGAAAATTTCGTTAGAAAGTTTTTAAAATAACTCTTATTGTTTTTGGCGGGTTTCTTTTGATGATTTTTAAAATTTATTGTTCTTATATAATAATAAAATAATTTTAAAGTATAATTTGATTAAATTATGTGGCATTTTGAAATTTAAATTAATAAAGAAAAGAAAATAATACAAAAATGAAAGTTTATCTTTTCAAACTGTTTAAAGTGGAACAGTGTTTGAAAAATGGACCAAAAAAAAAAAAAAAAAAAGAAGAGAAGAAAAGAAAAGAGACAACTAGATAAATGACCATTAGTTGTTTTGAAAAATGACAAATTACTATTTTTAGTAGATTTTTTTAATAATAAATTGGATGAAAATGTCCCTAATGGAAATATAAATCCAGTGAACAATTAAACTCAAATACAACATAATAAAGGTGAGAAACTAAGATAATTCGGGGAAGATCTAAGAAATACAGTTTATCTTACCCAACAAATTTAGATTTAGAAAGATATTACGAAATAATCCATACAAATTAGTAAGATTTTATAACAACGAAATTGACTAAAATATTATCGAACGAAATCTAGATACAATGAAAATTTAAATTCAAATAAAGCATAAATCAAGATTAGGAAATACAATTGATCTTAAGGACAAAATTTAACCAAAAAATTATAAATTGACAAAGATACTATGGAAACAATCAATATAATCTTAACAACACTTGGGGATTCCTTGAGATCAATTCGAGGAGTGGCTGGGTTTTTCTATGATGTGGATTTATCAGCCCCAATTGCAGAAGAGAATTTTGGGCTTATAGCCATTGGGGGAGGGGGGCGAAATTGAAACGTAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTGAAAGATGGCCACACGTGAGGTAGGCGCGACCAAGATTAACATGTTATATCCGTTTTACCCCGCCGCAATTTCAAACACCAGAGAGGTCCTACAATCGCGTATGGTGTATCTAAACCCCCTACCCAACAAAGTCTCCCTACTTTTCGTTTAAAATTAATTTGGTAGATTATTCAAATCTTTTTCAAATTTAAGTTAACAAACTTTCGTATATTAAATTAATGTTAAGATAATTAAATACTTTTTTTTTTCAAAATTCATCGGAAGATAACAGAAACAGTATTTTTTTTTCTTCCATCGATGAATATATTGTTCAATCTACACCAGGTATTTTTCGGTTTTTCAGATTTTTGTTCACTAACCGCTTCAGTCTACACTAGGTATTTTTCGGTTTTATAGATTTTGTTCACTGAATGCTTCAATCTACACCAGGTATTTTTGGTTTTTCAGATTTTGTTCACTGAATGCTTCACTCCATACCGGATGCATTCCACACCGCAAATTGGTTGGCTGAACGTGGTGGTACTATTCGATGGAAGGTGGGATGAAAACAATCGGTACAACGGGTTCAAGTCTGCCAGTGTGCCAGTATCGGAGGGGTGCACAATACAAGACTTCACTGAATGCATTCAGAGCAAGGTGTTTCCATCTGGCGAGCACATGATCACTCGGTTAACCATGTACACGAATGGTATCGACAAGTCTAACATAATCCGAATCACTGATGACAGGGATGTTACATGGTTCATGTCAAACATTGGTGATGGGATGACTAGTGATATATGTGTTGTGGTTGACCACTGTGAAGTAGATTCACATGTGGAAAATACAATGTATTTACAAGGTGGAAATCACGGATCAACATTGCAGCAGAAGATCATAAAAAAAAATTACGCAATTATTGATTACGTTGATGTTGAAGATTCAGTACCGGTTATGGAAGATTCAGTTTTTCAAGACAAGGACCAGTTGAGGAAAGCAATATACTTGCTTTTAAAAAACAGTTTCCAAATACGAACCATTAAATCCAACTAGAAATCTTTTGTTGTTGGATGCAAGGACGTTTTGTGTTGTTGGTACATCCGGGCATCTCGTCATTTGGATGGGGGTTTGTGGATGGTTCGTAAGTTCATGGATAGACACGAATGTCCCCTTGATATTGTAAAAAATGATCACAGGCAAACTACAGCTTGGATTGTGGGGGAGTGTTTGAAGTCATTTTTAAAAGTAAATGACAAGGTCCAGTGTCGCTCGCACGATGTTATTAACTACATGAGGAGGAAACATTGTGTCAACATCAGTTATGACAAGGCGTGGTGGGGGCGAGAACTTGCACTCAAAGCCATCAGAGGTTCCCCCGAAGCATCATATGCACTAATTCCAGCTTTCTCGGCTGCCTTGATCGAGAAAAATCCAGGTTTGATGTTTTAATCACTTTTCAAAGTTAGGTCAGCATTCACACGTACAATGTATTTTGATATTATGTACAATAAATAACATACATCACTGCAGGGGGGAAGACAATGCATACAGTGTTTTTTGCTATTCTGTACAATCGTGTAATCTTATATTATTTTGCAGGCACATACACTGCTTTTGATGTTGACGATCAAGACAGGTTCAGGTATTTCTTCATGTGTCTCTCTACGTCTATACATGCATGGAAATACTGCTTTCCTATTATGTCGGTTGACGGTGCAACGCTAAAGCACAAATTCTTTGGCACTATGTTATCTGCTTGCACTGTGGATGGGAACTCTCAAATTGTCCCATTGGCATTCGCCATCGTAGATTCAGAGAATGATGCTTCATGGACGTGGTTTTTCCGTAACTTGAAATCTGCGTTAGGTGAGCATAAAGAGTTAGTTATCGTATCCGATGGACACGTTAGCATACCAAACGGTGTTAGGAATAGCTATGATTATGCGGAGCATGGTATTTGTGTGTGA

mRNA sequence

ATGGGGAAGAAACAGAGCATTGCTTCAGCGCGAGACCGAGTGGTTACGAGATCTCAATCCATTGCTATGGAGCGTGAAAAGATTTCGAAGCGATCATCGCCAAATCCAGTTGTTGCTGTGGAGCCGGAAGGACTGGTAAAGCGAATGCGAAGAGATATTAAGCCCATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGTGCATTCCTCTGCTTCATCCTCTGCGTCTTCATCTTCGTACTGGTACGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATAATGCTTGCGGCGACTAGTCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAATATACGGCCTTCAAATGGATCAAACTCTACGTTTCTGCCTTCGACGGAAGCCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCATTTTTCCTGGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAAACTCCCAAATGAAAATCCCAAAACACGATTCAACGGATAACACATTGGAGTCCGGTTGTTGTGTCTTGCGCAATGTTAAAACTGGCATCTGGATAGCTGATCTACAACTTGTTCGTTGTCCCGTGTGCGACCTCAATACATGTGACGGAACAATGCAAACGTTGGATGCAAGACACATAGAGCTGTTCCTGAATGAAGGCTACCAAGATGGTAGTTGGGAATATCAGATTGTAGGTTTTCATGATATCAGGGAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGAAAGACTCTTCAACCTCTGGAATACTGGATCTGAAAACATGGACAGGAAATCGAACTGATTGGCAACCAAAGGCAATGGTTACTCTCAACGCGGTTGCTGTAAATACCTATTTACAAGACAATGAAGGAGTTCATGTGAAATACCAGGCCATGAGAGCCGGAGTAAATGGAGAGGTATTTTTGGTTTTTCAGATTTTGTTCACTGAATGCTTCACTCCATACCGGATGCATTCCACACCGCAAATTGGTTGGCTGAACGTGGTGGTACTATTCGATGGAAGGTGGGATGAAAACAATCGGTACAACGGGTTCAAGTCTGCCAGTGTGCCAGTATCGGAGGGGTGCACAATACAAGACTTCACTGAATGCATTCAGAGCAAGGTGTTTCCATCTGGCGAGCACATGATCACTCGGTTAACCATGTACACGAATGGTATCGACAAGTCTAACATAATCCGAATCACTGATGACAGGGATGTTACATGGTTCATGTCAAACATTGGTGATGGGATGACTAGTGATATATGTGTTGTGGTTGACCACTGTGAAGTAGATTCACATGTGGAAAATACAATGTATTTACAAGGTGGAAATCACGGATCAACATTGCAGCAGAAGATCATAAAAAAAAATTACGCAATTATTGATTACGTTGATGTTGAAGATTCAGTACCGGTTATGGAAGATTCAGTTTTTCAAGACAAGGACCAGCAAACTACAGCTTGGATTGTGGGGGAGTGTTTGAAGTCATTTTTAAAAGTAAATGACAAGGTCCAGTGTCGCTCGCACGATGTTATTAACTACATGAGGAGGAAACATTGTGTCAACATCAGTTATGACAAGGCGTGGTGGGGGCGAGAACTTGCACTCAAAGCCATCAGAGGTTCCCCCGAAGCATCATATGCACTAATTCCAGCTTTCTCGGCTGCCTTGATCGAGAAAAATCCAGGCACATACACTGCTTTTGATGTTGACGATCAAGACAGGTTCAGGTATTTCTTCATGTGTCTCTCTACGTCTATACATGCATGGAAATACTGCTTTCCTATTATGTCGGTTGACGGTGCAACGCTAAAGCACAAATTCTTTGGCACTATGTTATCTGCTTGCACTGTGGATGGGAACTCTCAAATTGTCCCATTGGCATTCGCCATCGTAGATTCAGAGAATGATGCTTCATGGACGTGGTTTTTCCGTAACTTGAAATCTGCGTTAGGTGAGCATAAAGAGTTAGTTATCGTATCCGATGGACACGTTAGCATACCAAACGGTGTTAGGAATAGCTATGATTATGCGGAGCATGGTATTTGTGTGTGA

Coding sequence (CDS)

ATGGGGAAGAAACAGAGCATTGCTTCAGCGCGAGACCGAGTGGTTACGAGATCTCAATCCATTGCTATGGAGCGTGAAAAGATTTCGAAGCGATCATCGCCAAATCCAGTTGTTGCTGTGGAGCCGGAAGGACTGGTAAAGCGAATGCGAAGAGATATTAAGCCCATTCATTCTTGCAGCTCTCCTCGTTCCGCTTTTCTTACTGTGCATTCCTCTGCTTCATCCTCTGCGTCTTCATCTTCGTACTGGTACGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATAATGCTTGCGGCGACTAGTCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAATATACGGCCTTCAAATGGATCAAACTCTACGTTTCTGCCTTCGACGGAAGCCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCATTTTTCCTGGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAAACTCCCAAATGAAAATCCCAAAACACGATTCAACGGATAACACATTGGAGTCCGGTTGTTGTGTCTTGCGCAATGTTAAAACTGGCATCTGGATAGCTGATCTACAACTTGTTCGTTGTCCCGTGTGCGACCTCAATACATGTGACGGAACAATGCAAACGTTGGATGCAAGACACATAGAGCTGTTCCTGAATGAAGGCTACCAAGATGGTAGTTGGGAATATCAGATTGTAGGTTTTCATGATATCAGGGAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGAAAGACTCTTCAACCTCTGGAATACTGGATCTGAAAACATGGACAGGAAATCGAACTGATTGGCAACCAAAGGCAATGGTTACTCTCAACGCGGTTGCTGTAAATACCTATTTACAAGACAATGAAGGAGTTCATGTGAAATACCAGGCCATGAGAGCCGGAGTAAATGGAGAGGTATTTTTGGTTTTTCAGATTTTGTTCACTGAATGCTTCACTCCATACCGGATGCATTCCACACCGCAAATTGGTTGGCTGAACGTGGTGGTACTATTCGATGGAAGGTGGGATGAAAACAATCGGTACAACGGGTTCAAGTCTGCCAGTGTGCCAGTATCGGAGGGGTGCACAATACAAGACTTCACTGAATGCATTCAGAGCAAGGTGTTTCCATCTGGCGAGCACATGATCACTCGGTTAACCATGTACACGAATGGTATCGACAAGTCTAACATAATCCGAATCACTGATGACAGGGATGTTACATGGTTCATGTCAAACATTGGTGATGGGATGACTAGTGATATATGTGTTGTGGTTGACCACTGTGAAGTAGATTCACATGTGGAAAATACAATGTATTTACAAGGTGGAAATCACGGATCAACATTGCAGCAGAAGATCATAAAAAAAAATTACGCAATTATTGATTACGTTGATGTTGAAGATTCAGTACCGGTTATGGAAGATTCAGTTTTTCAAGACAAGGACCAGCAAACTACAGCTTGGATTGTGGGGGAGTGTTTGAAGTCATTTTTAAAAGTAAATGACAAGGTCCAGTGTCGCTCGCACGATGTTATTAACTACATGAGGAGGAAACATTGTGTCAACATCAGTTATGACAAGGCGTGGTGGGGGCGAGAACTTGCACTCAAAGCCATCAGAGGTTCCCCCGAAGCATCATATGCACTAATTCCAGCTTTCTCGGCTGCCTTGATCGAGAAAAATCCAGGCACATACACTGCTTTTGATGTTGACGATCAAGACAGGTTCAGGTATTTCTTCATGTGTCTCTCTACGTCTATACATGCATGGAAATACTGCTTTCCTATTATGTCGGTTGACGGTGCAACGCTAAAGCACAAATTCTTTGGCACTATGTTATCTGCTTGCACTGTGGATGGGAACTCTCAAATTGTCCCATTGGCATTCGCCATCGTAGATTCAGAGAATGATGCTTCATGGACGTGGTTTTTCCGTAACTTGAAATCTGCGTTAGGTGAGCATAAAGAGTTAGTTATCGTATCCGATGGACACGTTAGCATACCAAACGGTGTTAGGAATAGCTATGATTATGCGGAGCATGGTATTTGTGTGTGA

Protein sequence

MGKKQSIASARDRVVTRSQSIAMEREKISKRSSPNPVVAVEPEGLVKRMRRDIKPIHSCSSPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLNSQMKIPKHDSTDNTLESGCCVLRNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTSGILDLKTWTGNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEVFLVFQILFTECFTPYRMHSTPQIGWLNVVVLFDGRWDENNRYNGFKSASVPVSEGCTIQDFTECIQSKVFPSGEHMITRLTMYTNGIDKSNIIRITDDRDVTWFMSNIGDGMTSDICVVVDHCEVDSHVENTMYLQGGNHGSTLQQKIIKKNYAIIDYVDVEDSVPVMEDSVFQDKDQQTTAWIVGECLKSFLKVNDKVQCRSHDVINYMRRKHCVNISYDKAWWGRELALKAIRGSPEASYALIPAFSAALIEKNPGTYTAFDVDDQDRFRYFFMCLSTSIHAWKYCFPIMSVDGATLKHKFFGTMLSACTVDGNSQIVPLAFAIVDSENDASWTWFFRNLKSALGEHKELVIVSDGHVSIPNGVRNSYDYAEHGICV

Homology

[Close]

BLAST of Lcy08g007560 vs. ExPASy Swiss-Prot
Match: Q9M365 (Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=2)

HSP 1 Score: 375.2 bits (962), Expect = 1.7e-102
Identity = 167/293 (57.00%), Postives = 228/293 (77.82%), Query Frame = 0


Query: 53  IKPIHSCSSPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFY 112
           ++ I  C SPR +  T  S  S        WY+ D+WT +++FLDG+SL+ L AT++WFY
Sbjct: 65  LRGIRGCVSPRCSAQTYQSRFS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFY 124

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP P   +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF
Sbjct: 125 KIAMEDTVWRFACLRDLQVPVPFPVSSTWIKIYASAFDGSHSYLFRQKEKHIDWMRIGAF 184

Query: 173 FLDSSVALLSERLNSQMKIPKHDSTDNTLE-SGCCVLRNVKTGIWIADLQLVRCPVCDLN 232
            LDS  +LL+E L+ ++K P+  + +  L+ SG C++ ++K+GIWIADLQLVRCPVCDL+
Sbjct: 185 VLDSRTSLLTESLSGRLKFPREGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLS 244

Query: 233 TCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTS 292
           TCDGTMQTLDARHIELFL+EGY+DGSW+Y ++G H +++   +A GAIFD+KHLK+SS S
Sbjct: 245 TCDGTMQTLDARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYS 304

Query: 293 GILDLKTWTGNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEV 345
           GIL+LK+WTG   D QPKA++  +AVAV+T LQ+NEG+ VKY  M+AG +G++
Sbjct: 305 GILNLKSWTGESNDSQPKAVIAPHAVAVHTRLQENEGILVKYHTMKAGTDGDI 349

[Close]

BLAST of Lcy08g007560 vs. ExPASy Swiss-Prot
Match: Q9FGB8 (Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE=2 SV=2)

HSP 1 Score: 364.8 bits (935), Expect = 2.3e-99
Identity = 161/293 (54.95%), Postives = 222/293 (75.77%), Query Frame = 0


Query: 53  IKPIHSCSSPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFY 112
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 173 FLDSSVALLSERLNSQMKIPKHDSTDNTLE-SGCCVLRNVKTGIWIADLQLVRCPVCDLN 232
            LDS  + L+E L+ ++K+P   + +  L+ SG C++ ++K+GIWIADLQL+RCP+CDL+
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 233 TCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTS 292
           TCDGTMQTLD RHIELFL+EGY+DGSW+Y ++G H + +   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 293 GILDLKTWTGNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEV 345
           GIL+LK+WTG   D QPKA++  +AVAV+T LQ NEG+ VKY  M+AG +G++
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDI 345

[Close]

BLAST of Lcy08g007560 vs. ExPASy TrEMBL
Match: A0A0A0KD88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 2.7e-183
Identity = 321/345 (93.04%), Postives = 332/345 (96.23%), Query Frame = 0


Query: 1   MGKKQSIASARDRVVTRSQSIAMEREKISKRSSP-NPVVAVEPEGLVKRMRRDIKPIHSC 60
           MGKK SIASARDRVVTRSQSI+MER K++KRSSP NPVVA EPEG+VKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDS 120
           SSPRSAFLT HSSASSSASSSS WYDADVWTEVAKFLDGRSL+MLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVA 180
           IWKYVCLRDLQVPAPQ+TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVA
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLNSQMKIPKHDSTDNTLESGCCVLRNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240
           LLSERL SQMKIPK DSTDNTLESGCCVL NVKTGIWIADLQLVRCPVCDLNTCDGTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTSGILDLKTW 300
           LDARHIELFLNEGYQDGSWEYQIVG HDIR+PTESASGAIFDVKHL+DSSTSG+LDLK+W
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEV 345
           TGNRTDWQPKAM+TLNAVAVNTYLQDNEGVHVKYQAMRAG NGEV
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEV 345

[Close]

BLAST of Lcy08g007560 vs. ExPASy TrEMBL
Match: A0A5D3DMQ8 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001350 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 1.4e-179
Identity = 316/346 (91.33%), Postives = 328/346 (94.80%), Query Frame = 0


Query: 1   MGKKQSIASARDRVVTRSQSIAMEREKISKRSSP--NPVVAVEPEGLVKRMRRDIKPIHS 60
           M KK SIASARDRVVTRSQSI+MER K+SKRSSP  NPVVA EPEG+VKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMED 120
           CSSP SAFLT HSSASSSASSSS WYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQ+TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 ALLSERLNSQMKIPKHDSTDNTLESGCCVLRNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240
           ALLSERL SQMK+PK  ST NTLESGCCVL NVKTGIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTSGILDLKT 300
           TLDARHIELFLNEGYQDGSWEYQIVG HDIR+PTESASGAIFDVKHL+DSSTSGILDLK+
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEV 345
           WTG+R DWQPKAM+TL+AVAVNTYLQDNEGVHVKYQAMRAG NGEV
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEV 346

[Close]

BLAST of Lcy08g007560 vs. ExPASy TrEMBL
Match: A0A1S3CBL0 (probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 2.6e-170
Identity = 297/324 (91.67%), Postives = 308/324 (95.06%), Query Frame = 0


Query: 23  MEREKISKRSSP--NPVVAVEPEGLVKRMRRDIKPIHSCSSPRSAFLTVHSSASSSASSS 82
           MER K+SKRSSP  NPVVA EPEG+VKRMRRDIKPIHSCSSP SAFLT HSSASSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  SYWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQYTAFK 142
           S WYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQ+TAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLNSQMKIPKHDSTDNT 202
           WIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVALLSERL SQMK+PK  ST NT
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCVLRNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCCVL NVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QIVGFHDIREPTESASGAIFDVKHLKDSSTSGILDLKTWTGNRTDWQPKAMVTLNAVAVN 322
           QIVG HDIR+PTESASGAIFDVKHL+DSSTSGILDLK+WTG+R DWQPKAM+TL+AVAVN
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

Query: 323 TYLQDNEGVHVKYQAMRAGVNGEV 345
           TYLQDNEGVHVKYQAMRAG NGEV
Sbjct: 301 TYLQDNEGVHVKYQAMRAGANGEV 324

[Close]

BLAST of Lcy08g007560 vs. ExPASy TrEMBL
Match: A0A6J1DCT6 (probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 PE=4 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 8.1e-164
Identity = 294/347 (84.73%), Postives = 313/347 (90.20%), Query Frame = 0


Query: 1   MGKKQSIASARDRVVTRSQSIAMEREKISKRSSPNPVVAVEPEG-LVKRMRRDIKP--IH 60
           MGKK SI+SARDRVVTRSQS AMERE++SKRS   P+ A EPEG + KR+RRD+K   IH
Sbjct: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKRS---PIAAAEPEGVMAKRIRRDVKHPIIH 60

Query: 61  SCSSPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVME 120
            CSSPRSAFLT        ASSSS WYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVME
Sbjct: 61  PCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVME 120

Query: 121 DSIWKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSS 180
           DSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF +DSS
Sbjct: 121 DSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSS 180

Query: 181 VALLSERLNSQMKIPKHDSTDNTLESGCCVLRNVKTGIWIADLQLVRCPVCDLNTCDGTM 240
           VALLSERL SQ+KIPK DS DN LESGCCVL NVKTGIWIADLQLVRCPVCDLNTCDGTM
Sbjct: 181 VALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTM 240

Query: 241 QTLDARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTSGILDLK 300
           QTLDARHIELFLNEGYQDGSW+YQIVG HDIR+PTE+ASGAIFDVKHL+DSSTSGILD++
Sbjct: 241 QTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQ 300

Query: 301 TWTGNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEV 345
           TW+G RTDWQPKAM+TL+AVAVNTYLQDNEGVHVKYQAMR G NGEV
Sbjct: 301 TWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEV 336

[Close]

BLAST of Lcy08g007560 vs. ExPASy TrEMBL
Match: A0A6J1EVC3 (probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 2.1e-143
Identity = 244/261 (93.49%), Postives = 254/261 (97.32%), Query Frame = 0


Query: 84  YDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQYTAFKWIK 143
           YDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQ+TAFKWIK
Sbjct: 11  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 70

Query: 144 LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLNSQMKIPKHDSTDNTLES 203
           LYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV LLSERL SQ+KIPK DS DNTLES
Sbjct: 71  LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLES 130

Query: 204 GCCVLRNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIV 263
           GCCVL NVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQI+
Sbjct: 131 GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIL 190

Query: 264 GFHDIREPTESASGAIFDVKHLKDSSTSGILDLKTWTGNRTDWQPKAMVTLNAVAVNTYL 323
           G HDIR+PTESASGAIFDVKHLKDSSTSGILDLK+WTG+RTDWQPKAM+TLNAVAVNTYL
Sbjct: 191 GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYL 250

Query: 324 QDNEGVHVKYQAMRAGVNGEV 345
           QDNEGVHVKYQAM+AG NGEV
Sbjct: 251 QDNEGVHVKYQAMKAGANGEV 271

[Close]

BLAST of Lcy08g007560 vs. NCBI nr
Match: XP_038875515.1 (probable F-box protein At3g61730 [Benincasa hispida])

HSP 1 Score: 653.7 bits (1685), Expect = 1.9e-183
Identity = 322/344 (93.60%), Postives = 330/344 (95.93%), Query Frame = 0


Query: 1   MGKKQSIASARDRVVTRSQSIAMEREKISKRSSPNPVVAVEPEGLVKRMRRDIKPIHSCS 60
           MGKK SIASARDRVVTRS SIAMER K+SKRSSPN VVA EPEG VKRMRRDIKPIHSCS
Sbjct: 1   MGKKLSIASARDRVVTRSLSIAMERAKMSKRSSPNSVVAAEPEGTVKRMRRDIKPIHSCS 60

Query: 61  SPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSI 120
           SPRSAFLT HSSASSSASSSS WYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMEDSI
Sbjct: 61  SPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120

Query: 121 WKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180
           WKYVCLRDLQVPAPQ+TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL
Sbjct: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180

Query: 181 LSERLNSQMKIPKHDSTDNTLESGCCVLRNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL 240
           LSERL SQMKIPK DSTD TLESGCCVL NVKTGIWIADLQLVRCPVCDLNTCDGTMQTL
Sbjct: 181 LSERLGSQMKIPKQDSTDKTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL 240

Query: 241 DARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTSGILDLKTWT 300
           DARHIELFLNEGYQDGSWEYQIVG HDIR+PTESASGAIFDVKHLKDSSTSGILDLK+WT
Sbjct: 241 DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300

Query: 301 GNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEV 345
           G+RTDWQPKAM+TLNAVAVNTYLQDNEGVHVKYQAM+AG NGEV
Sbjct: 301 GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEV 344

[Close]

BLAST of Lcy08g007560 vs. NCBI nr
Match: XP_004140675.1 (probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical protein Csa_005078 [Cucumis sativus])

HSP 1 Score: 652.1 bits (1681), Expect = 5.5e-183
Identity = 321/345 (93.04%), Postives = 332/345 (96.23%), Query Frame = 0


Query: 1   MGKKQSIASARDRVVTRSQSIAMEREKISKRSSP-NPVVAVEPEGLVKRMRRDIKPIHSC 60
           MGKK SIASARDRVVTRSQSI+MER K++KRSSP NPVVA EPEG+VKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDS 120
           SSPRSAFLT HSSASSSASSSS WYDADVWTEVAKFLDGRSL+MLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVA 180
           IWKYVCLRDLQVPAPQ+TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVA
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLNSQMKIPKHDSTDNTLESGCCVLRNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240
           LLSERL SQMKIPK DSTDNTLESGCCVL NVKTGIWIADLQLVRCPVCDLNTCDGTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTSGILDLKTW 300
           LDARHIELFLNEGYQDGSWEYQIVG HDIR+PTESASGAIFDVKHL+DSSTSG+LDLK+W
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEV 345
           TGNRTDWQPKAM+TLNAVAVNTYLQDNEGVHVKYQAMRAG NGEV
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEV 345

[Close]

BLAST of Lcy08g007560 vs. NCBI nr
Match: XP_023548391.1 (probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 651.7 bits (1680), Expect = 7.2e-183
Identity = 320/344 (93.02%), Postives = 332/344 (96.51%), Query Frame = 0


Query: 1   MGKKQSIASARDRVVTRSQSIAMEREKISKRSSPNPVVAVEPEGLVKRMRRDIKPIHSCS 60
           MGKK SIASARDRVVTRSQSIAMEREKIS  SSPNPVVAVEPEG+VKRMRRDIKPIHSCS
Sbjct: 1   MGKKLSIASARDRVVTRSQSIAMEREKIS--SSPNPVVAVEPEGMVKRMRRDIKPIHSCS 60

Query: 61  SPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSI 120
           SPRS FLT HSSASSSASSS+ WYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMEDSI
Sbjct: 61  SPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120

Query: 121 WKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180
           WKYVCLRDLQVPAPQ+TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV L
Sbjct: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVL 180

Query: 181 LSERLNSQMKIPKHDSTDNTLESGCCVLRNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL 240
           LSERL SQ+KIPK DSTDNTLESGCCVL NVKTGIWIADLQLVRCPVCDLNTCDGTMQTL
Sbjct: 181 LSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL 240

Query: 241 DARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTSGILDLKTWT 300
           DARHIELFLNEGYQDGSWEYQI+G HDIR+PTESASGAIFDVKHLKDSSTSGILDLK+WT
Sbjct: 241 DARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300

Query: 301 GNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEV 345
           G+RTDWQPKAM+TLNAVAVNTYLQDNEGVHVKYQAM+AG NGEV
Sbjct: 301 GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEV 342

[Close]

BLAST of Lcy08g007560 vs. NCBI nr
Match: TYK24589.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 639.8 bits (1649), Expect = 2.8e-179
Identity = 316/346 (91.33%), Postives = 328/346 (94.80%), Query Frame = 0


Query: 1   MGKKQSIASARDRVVTRSQSIAMEREKISKRSSP--NPVVAVEPEGLVKRMRRDIKPIHS 60
           M KK SIASARDRVVTRSQSI+MER K+SKRSSP  NPVVA EPEG+VKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMED 120
           CSSP SAFLT HSSASSSASSSS WYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSV 180
           SIWKYVCLRDLQVPAPQ+TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 ALLSERLNSQMKIPKHDSTDNTLESGCCVLRNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240
           ALLSERL SQMK+PK  ST NTLESGCCVL NVKTGIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTSGILDLKT 300
           TLDARHIELFLNEGYQDGSWEYQIVG HDIR+PTESASGAIFDVKHL+DSSTSGILDLK+
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEV 345
           WTG+R DWQPKAM+TL+AVAVNTYLQDNEGVHVKYQAMRAG NGEV
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEV 346

[Close]

BLAST of Lcy08g007560 vs. NCBI nr
Match: XP_008459999.1 (PREDICTED: probable F-box protein At3g61730 [Cucumis melo])

HSP 1 Score: 609.0 bits (1569), Expect = 5.3e-170
Identity = 297/324 (91.67%), Postives = 308/324 (95.06%), Query Frame = 0


Query: 23  MEREKISKRSSP--NPVVAVEPEGLVKRMRRDIKPIHSCSSPRSAFLTVHSSASSSASSS 82
           MER K+SKRSSP  NPVVA EPEG+VKRMRRDIKPIHSCSSP SAFLT HSSASSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  SYWYDADVWTEVAKFLDGRSLIMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQYTAFK 142
           S WYDADVWTEVAKFLDGRSL+MLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQ+TAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVALLSERLNSQMKIPKHDSTDNT 202
           WIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFFLDSSVALLSERL SQMK+PK  ST NT
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCVLRNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCCVL NVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QIVGFHDIREPTESASGAIFDVKHLKDSSTSGILDLKTWTGNRTDWQPKAMVTLNAVAVN 322
           QIVG HDIR+PTESASGAIFDVKHL+DSSTSGILDLK+WTG+R DWQPKAM+TL+AVAVN
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

Query: 323 TYLQDNEGVHVKYQAMRAGVNGEV 345
           TYLQDNEGVHVKYQAMRAG NGEV
Sbjct: 301 TYLQDNEGVHVKYQAMRAGANGEV 324

[Close]

BLAST of Lcy08g007560 vs. TAIR 10
Match: AT5G36000.1 (BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 364.8 bits (935), Expect = 1.6e-100
Identity = 161/293 (54.95%), Postives = 222/293 (75.77%), Query Frame = 0


Query: 53  IKPIHSCSSPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFY 112
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 173 FLDSSVALLSERLNSQMKIPKHDSTDNTLE-SGCCVLRNVKTGIWIADLQLVRCPVCDLN 232
            LDS  + L+E L+ ++K+P   + +  L+ SG C++ ++K+GIWIADLQL+RCP+CDL+
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 233 TCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTS 292
           TCDGTMQTLD RHIELFL+EGY+DGSW+Y ++G H + +   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 293 GILDLKTWTGNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEV 345
           GIL+LK+WTG   D QPKA++  +AVAV+T LQ NEG+ VKY  M+AG +G++
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDI 345

[Close]

BLAST of Lcy08g007560 vs. TAIR 10
Match: AT3G61730.1 (reduced male fertility )

HSP 1 Score: 357.8 bits (917), Expect = 2.0e-98
Identity = 163/293 (55.63%), Postives = 223/293 (76.11%), Query Frame = 0


Query: 53  IKPIHSCSSPRSAFLTVHSSASSSASSSSYWYDADVWTEVAKFLDGRSLIMLAATSRWFY 112
           ++ I  C SPR +  T  S  S        WY+ D+WT +++FLDG+SL+ L AT++WFY
Sbjct: 65  LRGIRGCVSPRCSAQTYQSRFS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFY 124

Query: 113 RLVMEDSIWKYVCLRDLQVPAPQYTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 172
           ++ MED++W++ CLRDLQVP P   +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF
Sbjct: 125 KIAMEDTVWRFACLRDLQVPVPFPVSSTWIKIYASAFDGSHSYLFRQKEKH-----IGAF 184

Query: 173 FLDSSVALLSERLNSQMKIPKHDSTDNTLE-SGCCVLRNVKTGIWIADLQLVRCPVCDLN 232
            LDS  +LL+E L+ ++K P+  + +  L+ SG C++ ++K+GIWIADLQLVRCPVCDL+
Sbjct: 185 VLDSRTSLLTESLSGRLKFPREGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLS 244

Query: 233 TCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKHLKDSSTS 292
           TCDGTMQTLDARHIELFL+EGY+DGSW+Y ++G H +++   +A GAIFD+KHLK+SS S
Sbjct: 245 TCDGTMQTLDARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYS 304

Query: 293 GILDLKTWTGNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVKYQAMRAGVNGEV 345
           GIL+LK+WTG   D QPKA++  +AVAV+T LQ+NEG+ VKY  M+AG +G++
Sbjct: 305 GILNLKSWTGESNDSQPKAVIAPHAVAVHTRLQENEGILVKYHTMKAGTDGDI 344

[Close]

BLAST of Lcy08g007560 vs. TAIR 10
Match: AT3G62500.1 (BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 162.2 bits (409), Expect = 1.6e-39
Identity = 84/168 (50.00%), Postives = 115/168 (68.45%), Query Frame = 0


Query: 165 DWMRIGAFFLDSSVALLSERLNSQMKIPKHDSTDNTLESGCCVLRNVKTGIWIADLQLVR 224
           DWM IGAF LDS  +LL+E L+ ++K+PK  + +  L+                 LQLVR
Sbjct: 178 DWMPIGAFVLDSRTSLLTESLSGRLKVPKEGTIERMLQK---------------YLQLVR 237

Query: 225 CPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIVGFHDIREPTESASGAIFDVKH 284
            PVCDL     TMQTLDARHIELFL+EGY+DGSW+Y ++G H +++   +A GAIFD+KH
Sbjct: 238 -PVCDLR----TMQTLDARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKH 297

Query: 285 LKDSSTSGILDLKTWTGNRTDWQPKAMVTLNAVAVNTYLQDNEGVHVK 333
            K+SS+SGIL+LK+WTG     QPKA++  +AVAV+T L++NE   ++
Sbjct: 298 HKESSSSGILNLKSWTGQPDISQPKAVIAPHAVAVHTRLRENEVAEIQ 325

The following BLAST results are available for this feature:

BLAST of Lcy08g007560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M365	1.7e-102	57.00	Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=...	[more]
Q9FGB8	2.3e-99	54.95	Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE...	[more]

BLAST of Lcy08g007560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD88	2.7e-183	93.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1	[more]
A0A5D3DMQ8	1.4e-179	91.33	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3CBL0	2.6e-170	91.67	probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV...	[more]
A0A6J1DCT6	8.1e-164	84.73	probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 ...	[more]
A0A6J1EVC3	2.1e-143	93.49	probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 P...	[more]

BLAST of Lcy08g007560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875515.1	1.9e-183	93.60	probable F-box protein At3g61730 [Benincasa hispida]	[more]
XP_004140675.1	5.5e-183	93.04	probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical prot...	[more]
XP_023548391.1	7.2e-183	93.02	probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo]	[more]
TYK24589.1	2.8e-179	91.33	putative F-box protein [Cucumis melo var. makuwa]	[more]
XP_008459999.1	5.3e-170	91.67	PREDICTED: probable F-box protein At3g61730 [Cucumis melo]	[more]

BLAST of Lcy08g007560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36000.1	1.6e-100	54.95	BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G617...	[more]
AT3G61730.1	2.0e-98	55.63	reduced male fertility	[more]
AT3G62500.1	1.6e-39	50.00	BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G6174...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 84..163 e-value: 1.6E-5 score: 26.7
None	No IPR available	PANTHER	PTHR47149	F-BOX PROTEIN RMF	coord: 16..345
IPR018289	MULE transposase domain	PFAM	PF10551	MULE	coord: 636..723 e-value: 2.0E-12 score: 47.4
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 87..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g007560.1	Lcy08g007560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0061458	reproductive system development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0018024	histone-lysine N-methyltransferase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding