Lcy08g007450 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g007450
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr08: 9697649 .. 9699679 (+)
RNA-Seq ExpressionLcy08g007450
SyntenyLcy08g007450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACATCAAAGTTTTCACATGCTTCCTCTATTGGTCGTTGGAAGAATCCAGTTTGTTTCTCGCTACTTTTCTTCAACTCTACATTTAGTTCCAATTTCTCCCCGAATCTCCAAACTGACAAAGAAATCATGCATTGAATATCTCCGGAACTGCAAAGCCATGAATCAACTCAAACAAATTCAGAGTCAGATCTTTCGAATTGGTCTCGAACGGGACAGAGACACCACCAACAAATTGATGGCATTTTGTGCAGACCCATCAGTTGGAAACTTGCACTACGCGGAGAGGATGTTTGATTACGTACAAGGCCCATCTCTATTTGTTTATAATGTGATGGTTAAAGCATATGCCAAAAGGGGTATTTTCAGAAAAGTCCTTTTGCTATTTCAACGGTTGAGGGAAGATGAGTTGTGGCCTGATAATTTTACTTACCCATTTGTTCTGAAAGCCATTGGTTGCTTAAGGGACGTGAGGCAAGGTGAAAAGGTTCATGGCTTTGTGGTGAAGACGGGAATGACTAATGATAATTATGTTTGTAATTCACTTATGGATATGTATGCTGAATTGGGCAAGGTTGAGAATGCTAAGAAGTTGTTTGGCGAAATGCCAACTAGAGATTCTATTTCTTGGAATGTTATGATTTCTGGGTATGTTAGGTGTCGGAGATTTGAGGATGCGGTTAGTGTATTTAAGGAAATGCAGCAAGAGAGCAATGAGAAACCTGGTGAAGCTACTGTAGTTAGCACTCTTTCTGCCTGTACAGCACTAAAAAATCTGGAGCTTGGGGAGGAAATTCACAACTATGTTAGAAAGGAGCTTGGTTTTACCACTATAATCAACAATGCATTGTTAGATATGTATGCAAAATGTGGGTGTTTAAGTATTGCCCGCAAAGTATTTGATGAAATGCTGATGAAAAATGTAATTTGTTGGACCAGCATGATTTCTGGCTATATTAACTGTGGTGATTTAAGAGAGGCTAGAGACTTGTTTGATAGAAGTCCAGTTAGAGATGTTGTTCTGTGGACAGCTATGATTAATGGGTATGTGCAGTTCAACCATTTTGACGAGGCTGTGGCCTTGTTCCGTGAAATGCAAATTCGAAAGGTTAAACCAGATAAGTTCACGGTGGTCTCTCTTCTTACAGGTTGTGCACAGTTGGGAGCTCTAGAGCAAGGGAAATGGATTCATGGATATATTGATGAGAACAGAATAACAATGGATGCTGTGGTTGGTACTGCACTCATTGAAATGTATTCCAAATGTGGACGTGTGGATAAATCTTTAGAAATTTTCTATGAGTTACAGGAGAAGGACACATCATCCTGGACATCGATGATTTGCGGTCTTGCCATGAATGGAAAGACTGGTGAAGCACTTAGGTTGTTCTCAGAAATGGAACTTGGGGGAGCTAAACCTGATGATATCACCTTTATTGGTGTTTTAAGTGCCTGTAGTCATGGTGGACTAGTTGAGGAAGGTCGTAGGTTTTTCAACTTGATGAAAAAGGTTTATCAGATTGAGCCAAAGGTAGAACATTATGGGTGCGTAATTGACCTCCTTGGTCGTGCTGGGCTGTTGGATGAAGCAGAGGAACTGATACAAGAGATTCCCAATGAAAATGACGAAATTGTGATTCCACTCTATGGTGCTTTGCTTAGTGCTTGCAGAATCCACAACAATGTTGACATGGGGGAAAGAATAGCTAAAAAACTGGTAAACATTCAATCATGTGATTCTAGCATTCACACACTTCTTGCAAATATATACGCTTCTGCTGACAGGTGGGAAGATGCAAAGAAAGTGAGAAGGAAAATGAAAGAACTTGGAGTTAAGAAGATGCCTGGATGTAGTTCAATCGAGGTCGATGGCATTGTTCACGAGTTTCTTGTCGGGGATCCATCTCATCCAGAAATGATGAAAATATGCTCCATGTTGGATAGAGTGGCTGGACCATTACTAGGATCTAAGGAATCTCATCTTGAAAGTGTGATGCCACTTCACATGGACGTCAATATTGCAGTTTGA

mRNA sequence

ATGGGACATCAAAGTTTTCACATGCTTCCTCTATTGGTCGTTGGAAGAATCCAGTTTGTTTCTCGCTACTTTTCTTCAACTCTACATTTAGTTCCAATTTCTCCCCGAATCTCCAAACTGACAAAGAAATCATGCATTGAATATCTCCGGAACTGCAAAGCCATGAATCAACTCAAACAAATTCAGAGTCAGATCTTTCGAATTGGTCTCGAACGGGACAGAGACACCACCAACAAATTGATGGCATTTTGTGCAGACCCATCAGTTGGAAACTTGCACTACGCGGAGAGGATGTTTGATTACGTACAAGGCCCATCTCTATTTGTTTATAATGTGATGGTTAAAGCATATGCCAAAAGGGGTATTTTCAGAAAAGTCCTTTTGCTATTTCAACGGTTGAGGGAAGATGAGTTGTGGCCTGATAATTTTACTTACCCATTTGTTCTGAAAGCCATTGGTTGCTTAAGGGACGTGAGGCAAGGTGAAAAGGTTCATGGCTTTGTGGTGAAGACGGGAATGACTAATGATAATTATGTTTGTAATTCACTTATGGATATGTATGCTGAATTGGGCAAGGTTGAGAATGCTAAGAAGTTGTTTGGCGAAATGCCAACTAGAGATTCTATTTCTTGGAATGTTATGATTTCTGGGTATGTTAGGTGTCGGAGATTTGAGGATGCGGTTAGTGTATTTAAGGAAATGCAGCAAGAGAGCAATGAGAAACCTGGTGAAGCTACTGTAGTTAGCACTCTTTCTGCCTGTACAGCACTAAAAAATCTGGAGCTTGGGGAGGAAATTCACAACTATGTTAGAAAGGAGCTTGGTTTTACCACTATAATCAACAATGCATTGTTAGATATGTATGCAAAATGTGGGTGTTTAAGTATTGCCCGCAAAGTATTTGATGAAATGCTGATGAAAAATGTAATTTGTTGGACCAGCATGATTTCTGGCTATATTAACTGTGGTGATTTAAGAGAGGCTAGAGACTTGTTTGATAGAAGTCCAGTTAGAGATGTTGTTCTGTGGACAGCTATGATTAATGGGTATGTGCAGTTCAACCATTTTGACGAGGCTGTGGCCTTGTTCCGTGAAATGCAAATTCGAAAGGTTAAACCAGATAAGTTCACGGTGGTCTCTCTTCTTACAGGTTGTGCACAGTTGGGAGCTCTAGAGCAAGGGAAATGGATTCATGGATATATTGATGAGAACAGAATAACAATGGATGCTGTGGTTGGTACTGCACTCATTGAAATGTATTCCAAATGTGGACGTGTGGATAAATCTTTAGAAATTTTCTATGAGTTACAGGAGAAGGACACATCATCCTGGACATCGATGATTTGCGGTCTTGCCATGAATGGAAAGACTGGTGAAGCACTTAGGTTGTTCTCAGAAATGGAACTTGGGGGAGCTAAACCTGATGATATCACCTTTATTGGTGTTTTAAGTGCCTGTAGTCATGGTGGACTAGTTGAGGAAGGTCGTAGGTTTTTCAACTTGATGAAAAAGGTTTATCAGATTGAGCCAAAGGTAGAACATTATGGGTGCGTAATTGACCTCCTTGGTCGTGCTGGGCTGTTGGATGAAGCAGAGGAACTGATACAAGAGATTCCCAATGAAAATGACGAAATTGTGATTCCACTCTATGGTGCTTTGCTTAGTGCTTGCAGAATCCACAACAATGTTGACATGGGGGAAAGAATAGCTAAAAAACTGGTAAACATTCAATCATGTGATTCTAGCATTCACACACTTCTTGCAAATATATACGCTTCTGCTGACAGGTGGGAAGATGCAAAGAAAGTGAGAAGGAAAATGAAAGAACTTGGAGTTAAGAAGATGCCTGGATGTAGTTCAATCGAGGTCGATGGCATTGTTCACGAGTTTCTTGTCGGGGATCCATCTCATCCAGAAATGATGAAAATATGCTCCATGTTGGATAGAGTGGCTGGACCATTACTAGGATCTAAGGAATCTCATCTTGAAAGTGTGATGCCACTTCACATGGACGTCAATATTGCAGTTTGA

Coding sequence (CDS)

ATGGGACATCAAAGTTTTCACATGCTTCCTCTATTGGTCGTTGGAAGAATCCAGTTTGTTTCTCGCTACTTTTCTTCAACTCTACATTTAGTTCCAATTTCTCCCCGAATCTCCAAACTGACAAAGAAATCATGCATTGAATATCTCCGGAACTGCAAAGCCATGAATCAACTCAAACAAATTCAGAGTCAGATCTTTCGAATTGGTCTCGAACGGGACAGAGACACCACCAACAAATTGATGGCATTTTGTGCAGACCCATCAGTTGGAAACTTGCACTACGCGGAGAGGATGTTTGATTACGTACAAGGCCCATCTCTATTTGTTTATAATGTGATGGTTAAAGCATATGCCAAAAGGGGTATTTTCAGAAAAGTCCTTTTGCTATTTCAACGGTTGAGGGAAGATGAGTTGTGGCCTGATAATTTTACTTACCCATTTGTTCTGAAAGCCATTGGTTGCTTAAGGGACGTGAGGCAAGGTGAAAAGGTTCATGGCTTTGTGGTGAAGACGGGAATGACTAATGATAATTATGTTTGTAATTCACTTATGGATATGTATGCTGAATTGGGCAAGGTTGAGAATGCTAAGAAGTTGTTTGGCGAAATGCCAACTAGAGATTCTATTTCTTGGAATGTTATGATTTCTGGGTATGTTAGGTGTCGGAGATTTGAGGATGCGGTTAGTGTATTTAAGGAAATGCAGCAAGAGAGCAATGAGAAACCTGGTGAAGCTACTGTAGTTAGCACTCTTTCTGCCTGTACAGCACTAAAAAATCTGGAGCTTGGGGAGGAAATTCACAACTATGTTAGAAAGGAGCTTGGTTTTACCACTATAATCAACAATGCATTGTTAGATATGTATGCAAAATGTGGGTGTTTAAGTATTGCCCGCAAAGTATTTGATGAAATGCTGATGAAAAATGTAATTTGTTGGACCAGCATGATTTCTGGCTATATTAACTGTGGTGATTTAAGAGAGGCTAGAGACTTGTTTGATAGAAGTCCAGTTAGAGATGTTGTTCTGTGGACAGCTATGATTAATGGGTATGTGCAGTTCAACCATTTTGACGAGGCTGTGGCCTTGTTCCGTGAAATGCAAATTCGAAAGGTTAAACCAGATAAGTTCACGGTGGTCTCTCTTCTTACAGGTTGTGCACAGTTGGGAGCTCTAGAGCAAGGGAAATGGATTCATGGATATATTGATGAGAACAGAATAACAATGGATGCTGTGGTTGGTACTGCACTCATTGAAATGTATTCCAAATGTGGACGTGTGGATAAATCTTTAGAAATTTTCTATGAGTTACAGGAGAAGGACACATCATCCTGGACATCGATGATTTGCGGTCTTGCCATGAATGGAAAGACTGGTGAAGCACTTAGGTTGTTCTCAGAAATGGAACTTGGGGGAGCTAAACCTGATGATATCACCTTTATTGGTGTTTTAAGTGCCTGTAGTCATGGTGGACTAGTTGAGGAAGGTCGTAGGTTTTTCAACTTGATGAAAAAGGTTTATCAGATTGAGCCAAAGGTAGAACATTATGGGTGCGTAATTGACCTCCTTGGTCGTGCTGGGCTGTTGGATGAAGCAGAGGAACTGATACAAGAGATTCCCAATGAAAATGACGAAATTGTGATTCCACTCTATGGTGCTTTGCTTAGTGCTTGCAGAATCCACAACAATGTTGACATGGGGGAAAGAATAGCTAAAAAACTGGTAAACATTCAATCATGTGATTCTAGCATTCACACACTTCTTGCAAATATATACGCTTCTGCTGACAGGTGGGAAGATGCAAAGAAAGTGAGAAGGAAAATGAAAGAACTTGGAGTTAAGAAGATGCCTGGATGTAGTTCAATCGAGGTCGATGGCATTGTTCACGAGTTTCTTGTCGGGGATCCATCTCATCCAGAAATGATGAAAATATGCTCCATGTTGGATAGAGTGGCTGGACCATTACTAGGATCTAAGGAATCTCATCTTGAAAGTGTGATGCCACTTCACATGGACGTCAATATTGCAGTTTGA

Protein sequence

MGHQSFHMLPLLVVGRIQFVSRYFSSTLHLVPISPRISKLTKKSCIEYLRNCKAMNQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVCNSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSVFKEMQQESNEKPGEATVVSTLSACTALKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMYSKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSMLDRVAGPLLGSKESHLESVMPLHMDVNIAV
Homology
[Close]
BLAST of Lcy08g007450 vs. ExPASy Swiss-Prot
Match: Q9C866 (Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E55 PE=2 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 1.1e-199
Identity = 337/565 (59.65%), Postives = 428/565 (75.75%), Query Frame = 0 

Query: 102 VQGPSLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQG 161
           +Q PSL +YN M+K+ A    F KVL LF  LR   L+PDNFT P VLK+IG LR V +G
Sbjct: 6   LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65

Query: 162 EKVHGFVVKTGMTNDNYVCNSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRC 221
           EKVHG+ VK G+  D+YV NSLM MYA LGK+E   K+F EMP RD +SWN +IS YV  
Sbjct: 66  EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125

Query: 222 RRFEDAVSVFKEMQQESNEKPGEATVVSTLSACTALKNLELGEEIHNYVRKELGFTTIIN 281
            RFEDA+ VFK M QESN K  E T+VSTLSAC+ALKNLE+GE I+ +V  E   +  I 
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185

Query: 282 NALLDMYAKCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVV 341
           NAL+DM+ KCGCL  AR VFD M  KNV CWTSM+ GY++ G + EAR LF+RSPV+DVV
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245

Query: 342 LWTAMINGYVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYI 401
           LWTAM+NGYVQFN FDEA+ LFR MQ   ++PD F +VSLLTGCAQ GALEQGKWIHGYI
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305

Query: 402 DENRITMDAVVGTALIEMYSKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEAL 461
           +ENR+T+D VVGTAL++MY+KCG ++ +LE+FYE++E+DT+SWTS+I GLAMNG +G AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365

Query: 462 RLFSEMELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDL 521
            L+ EME  G + D ITF+ VL+AC+HGG V EGR+ F+ M + + ++PK EH  C+IDL
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425

Query: 522 LGRAGLLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDS 581
           L RAGLLDEAEELI ++  E+DE ++P+Y +LLSA R + NV + ER+A+KL  ++  DS
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485

Query: 582 SIHTLLANIYASADRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDP--SHPE 641
           S HTLLA++YASA+RWED   VRRKMK+LG++K PGCSSIE+DG+ HEF+VGD   SHP+
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545

Query: 642 MMKICSMLDRVAGPLLGSKESHLES 665
           M +I SML +    +L  +   ++S
Sbjct: 546 MDEINSMLHQTTNLMLDLEHKEIDS 570

[Close]
BLAST of Lcy08g007450 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 2.1e-147
Identity = 257/606 (42.41%), Postives = 397/606 (65.51%), Query Frame = 0 

Query: 46  IEYLRNCKAMNQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGP 105
           +  L  CK +  LKQIQ+Q+   GL  D   +++L+AFCA      L Y+ ++   ++ P
Sbjct: 57  LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116

Query: 106 SLFVYNVMVKAYAKRGIFRKVLLLF-QRLRED--ELWPDNFTYPFVLKAIGCLRDVRQGE 165
           ++F +NV ++ +++    ++  LL+ Q LR    E  PD+FTYP + K    LR    G 
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176

Query: 166 KVHGFVVKTGMTNDNYVCNSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCR 225
            + G V+K  +   ++V N+ + M+A  G +ENA+K+F E P RD +SWN +I+GY +  
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236

Query: 226 RFEDAVSVFKEMQQESNEKPGEATVVSTLSACTALKNLELGEEIHNYVRKE-LGFTTIIN 285
             E A+ V+K M+ E   KP + T++  +S+C+ L +L  G+E + YV++  L  T  + 
Sbjct: 237 EAEKAIYVYKLMESE-GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 296

Query: 286 NALLDMYAKCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVV 345
           NAL+DM++KCG +  AR++FD +  + ++ WT+MISGY  CG L  +R LFD    +DVV
Sbjct: 297 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 356

Query: 346 LWTAMINGYVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYI 405
           LW AMI G VQ     +A+ALF+EMQ    KPD+ T++  L+ C+QLGAL+ G WIH YI
Sbjct: 357 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 416

Query: 406 DENRITMDAVVGTALIEMYSKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEAL 465
           ++  ++++  +GT+L++MY+KCG + ++L +F+ +Q +++ ++T++I GLA++G    A+
Sbjct: 417 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 476

Query: 466 RLFSEMELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDL 525
             F+EM   G  PD+ITFIG+LSAC HGG+++ GR +F+ MK  + + P+++HY  ++DL
Sbjct: 477 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 536

Query: 526 LGRAGLLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDS 585
           LGRAGLL+EA+ L++ +P E D  V   +GALL  CR+H NV++GE+ AKKL+ +   DS
Sbjct: 537 LGRAGLLEEADRLMESMPMEADAAV---WGALLFGCRMHGNVELGEKAAKKLLELDPSDS 596

Query: 586 SIHTLLANIYASADRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMM 645
            I+ LL  +Y  A+ WEDAK+ RR M E GV+K+PGCSSIEV+GIV EF+V D S PE  
Sbjct: 597 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 656

Query: 646 KICSML 648
           KI   L
Sbjct: 657 KIYDRL 658

[Close]
BLAST of Lcy08g007450 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 500.0 bits (1286), Expect = 4.3e-140
Identity = 246/610 (40.33%), Postives = 399/610 (65.41%), Query Frame = 0 

Query: 46  IEYLRNCKAMNQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGP 105
           I  L  CK  +Q KQ+ SQ    G+  +     KL  F      G++ YA ++F  +  P
Sbjct: 38  ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97

Query: 106 SLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRD---VRQGE 165
            + V+N M+K ++K     + + L+  + ++ + PD+ T+PF+L   G  RD   +  G+
Sbjct: 98  DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN--GLKRDGGALACGK 157

Query: 166 KVHGFVVKTGMTNDNYVCNSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCR 225
           K+H  VVK G+ ++ YV N+L+ MY+  G ++ A+ +F      D  SWN+MISGY R +
Sbjct: 158 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 217

Query: 226 RFEDAVSVFKEMQQESNEKPGEATVVSTLSACTALKNLELGEEIHNYVRK-ELGFTTIIN 285
            +E+++ +  EM++ +   P   T++  LSAC+ +K+ +L + +H YV + +   +  + 
Sbjct: 218 EYEESIELLVEMER-NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 277

Query: 286 NALLDMYAKCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVV 345
           NAL++ YA CG + IA ++F  M  ++VI WTS++ GY+  G+L+ AR  FD+ PVRD +
Sbjct: 278 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 337

Query: 346 LWTAMINGYVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYI 405
            WT MI+GY++   F+E++ +FREMQ   + PD+FT+VS+LT CA LG+LE G+WI  YI
Sbjct: 338 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 397

Query: 406 DENRITMDAVVGTALIEMYSKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEAL 465
           D+N+I  D VVG ALI+MY KCG  +K+ ++F+++ ++D  +WT+M+ GLA NG+  EA+
Sbjct: 398 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 457

Query: 466 RLFSEMELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDL 525
           ++F +M+    +PDDIT++GVLSAC+H G+V++ R+FF  M+  ++IEP + HYGC++D+
Sbjct: 458 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 517

Query: 526 LGRAGLLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDS 585
           LGRAGL+ EA E+++++P   + IV   +GALL A R+HN+  M E  AKK++ ++  + 
Sbjct: 518 LGRAGLVKEAYEILRKMPMNPNSIV---WGALLGASRLHNDEPMAELAAKKILELEPDNG 577

Query: 586 SIHTLLANIYASADRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMM 645
           +++ LL NIYA   RW+D ++VRRK+ ++ +KK PG S IEV+G  HEF+ GD SH +  
Sbjct: 578 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 637

Query: 646 KICSMLDRVA 652
           +I   L+ +A
Sbjct: 638 EIYMKLEELA 641

[Close]
BLAST of Lcy08g007450 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 2.7e-134
Identity = 231/608 (37.99%), Postives = 376/608 (61.84%), Query Frame = 0 

Query: 46  IEYLRNCKAMNQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGP 105
           I  +  C ++ QLKQ    + R G   D  + +KL A  A  S  +L YA ++FD +  P
Sbjct: 34  ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93

Query: 106 SLFVYNVMVKAYAK-RGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKV 165
           + F +N +++AYA        +      + E + +P+ +T+PF++KA   +  +  G+ +
Sbjct: 94  NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153

Query: 166 HGFVVKTGMTNDNYVCNSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRF 225
           HG  VK+ + +D +V NSL+  Y   G +++A K+F  +  +D +SWN MI+G+V+    
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213

Query: 226 EDAVSVFKEMQQESNEKPGEATVVSTLSACTALKNLELGEEIHNYVRK-ELGFTTIINNA 285
           + A+ +FK+M+ E + K    T+V  LSAC  ++NLE G ++ +Y+ +  +     + NA
Sbjct: 214 DKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 273

Query: 286 LLDMYAKCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLW 345
           +LDMY KCG +  A+++FD M  K+ + WT+M+ GY    D   AR++ +  P +D+V W
Sbjct: 274 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 333

Query: 346 TAMINGYVQFNHFDEAVALFREMQIRK-VKPDKFTVVSLLTGCAQLGALEQGKWIHGYID 405
            A+I+ Y Q    +EA+ +F E+Q++K +K ++ T+VS L+ CAQ+GALE G+WIH YI 
Sbjct: 334 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 393

Query: 406 ENRITMDAVVGTALIEMYSKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALR 465
           ++ I M+  V +ALI MYSKCG ++KS E+F  ++++D   W++MI GLAM+G   EA+ 
Sbjct: 394 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 453

Query: 466 LFSEMELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLL 525
           +F +M+    KP+ +TF  V  ACSH GLV+E    F+ M+  Y I P+ +HY C++D+L
Sbjct: 454 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 513

Query: 526 GRAGLLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSS 585
           GR+G L++A + I+ +P      V   +GALL AC+IH N+++ E    +L+ ++  +  
Sbjct: 514 GRSGYLEKAVKFIEAMPIPPSTSV---WGALLGACKIHANLNLAEMACTRLLELEPRNDG 573

Query: 586 IHTLLANIYASADRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMK 645
            H LL+NIYA   +WE+  ++R+ M+  G+KK PGCSSIE+DG++HEFL GD +HP   K
Sbjct: 574 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 633

Query: 646 ICSMLDRV 651
           +   L  V
Sbjct: 634 VYGKLHEV 637

[Close]
BLAST of Lcy08g007450 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 1.8e-130
Identity = 245/663 (36.95%), Postives = 377/663 (56.86%), Query Frame = 0 

Query: 25  SSTLHLVPIS--PRISKLTKKSCIEYLRNCKAMNQLKQIQSQIFRIGLERDRDTTNKLMA 84
           S   H +P S  P    +     +  L NCK +  L+ I +Q+ +IGL       +KL+ 
Sbjct: 14  SYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE 73

Query: 85  FC-ADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPD 144
           FC   P    L YA  +F  +Q P+L ++N M + +A        L L+  +    L P+
Sbjct: 74  FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 133

Query: 145 NFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVCNSLMDMYAELGK--------- 204
           ++T+PFVLK+    +  ++G+++HG V+K G   D YV  SL+ MY + G+         
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193

Query: 205 ----------------------VENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSV 264
                                 +ENA+KLF E+P +D +SWN MISGY     +++A+ +
Sbjct: 194 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253

Query: 265 FKEMQQESNEKPGEATVVSTLSACTALKNLELGEEIHNYVRKE-LGFTTIINNALLDMYA 324
           FK+M  ++N +P E+T+V+ +SAC    ++ELG ++H ++     G    I NAL+D+Y+
Sbjct: 254 FKDM-MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 313

Query: 325 KCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMING 384
           KCG L  A                        CG       LF+R P +DV+ W  +I G
Sbjct: 314 KCGELETA------------------------CG-------LFERLPYKDVISWNTLIGG 373

Query: 385 YVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDE--NRIT 444
           Y   N + EA+ LF+EM      P+  T++S+L  CA LGA++ G+WIH YID+    +T
Sbjct: 374 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 433

Query: 445 MDAVVGTALIEMYSKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEM 504
             + + T+LI+MY+KCG ++ + ++F  +  K  SSW +MI G AM+G+   +  LFS M
Sbjct: 434 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 493

Query: 505 ELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGL 564
              G +PDDITF+G+LSACSH G+++ GR  F  M + Y++ PK+EHYGC+IDLLG +GL
Sbjct: 494 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGL 553

Query: 565 LDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLL 624
             EAEE+I  +  E D ++   + +LL AC++H NV++GE  A+ L+ I+  +   + LL
Sbjct: 554 FKEAEEMINMMEMEPDGVI---WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 613

Query: 625 ANIYASADRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSML 651
           +NIYASA RW +  K R  + + G+KK+PGCSSIE+D +VHEF++GD  HP   +I  ML
Sbjct: 614 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 641

[Close]
BLAST of Lcy08g007450 vs. ExPASy TrEMBL
Match: A0A6J1H7E9 (pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita moschata OX=3662 GN=LOC111461170 PE=4 SV=1)

HSP 1 Score: 1241.5 bits (3211), Expect = 0.0e+00
Identity = 599/676 (88.61%), Postives = 639/676 (94.53%), Query Frame = 0 

Query: 1   MGHQSFHMLPLLVVGRIQFVSRYFSSTLHLVPISPRISKLTKKSCIEYLRNCKAMNQLKQ 60
           MGH S HMLPLL+V RIQF SR++SS+LH+VPIS ++SKLTKKSCIEYLRNCK+M+QLKQ
Sbjct: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISSQLSKLTKKSCIEYLRNCKSMDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGLERDRDTTNKLMAFCADPSVGNL Y ERMFDY+QGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVC 180
           GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRD R+GEKVHGFVVKTGM  D YVC
Sbjct: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSVFKEMQQESNE 240
           NSLMDMYAELGKV NAKKLF EMP RDS+SWNV+ISGYVRCRRFEDAV+VFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKV 300
           KPGEATVVSTLSACTALKNLELG EIHNYVRK+LGFTTIINNALLDMYAKCGCL IARK+
Sbjct: 241 KPGEATVVSTLSACTALKNLELGVEIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMY 420
           ALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFI 480
           SKCG VDKSLEIFY+L+EKDT+SWTSMICGLAMNG+TGEALRLF+EMEL GAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPN 540
           GVLSACSHGGLVEEGRR+FN MK VY+IEPKVEHYGCVIDLLGRAG LDEAEELI+EIP+
Sbjct: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGQLDEAEELIREIPS 540

Query: 541 ENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDA 600
           END I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A RWEDA
Sbjct: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSMLDRVAGPLLGSKES 660
           K+VRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM++ICSMLD V GPLLG KES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660

Query: 661 HLESVMPLHMDVNIAV 677
            LE+V+PLH+D  + +
Sbjct: 661 ELETVIPLHIDGTVVL 676

[Close]
BLAST of Lcy08g007450 vs. ExPASy TrEMBL
Match: A0A6J1KW17 (pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita maxima OX=3661 GN=LOC111498101 PE=4 SV=1)

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 597/676 (88.31%), Postives = 637/676 (94.23%), Query Frame = 0 

Query: 1   MGHQSFHMLPLLVVGRIQFVSRYFSSTLHLVPISPRISKLTKKSCIEYLRNCKAMNQLKQ 60
           M H S HMLPLL+V RIQF SR++SS+LH+VPISP++SKLTKKSCIEYLRNCK+M+QLKQ
Sbjct: 1   MRHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSMDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGL+RDRDTTNKLMAFCADPSVGNLHY ERMFDY+QGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLDRDRDTTNKLMAFCADPSVGNLHYTERMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVC 180
           GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRD R+GEKVHGFVVKTGM  D YVC
Sbjct: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSVFKEMQQESNE 240
           NSLMDMYAELGKV NAKKLF EMP RDS+SWNV+ISGYVRCRRFEDAV+VFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKV 300
           KPGEATVVSTLSACTALKNL LG EIHNYVRKELGFTTIINNALLDMYAKCGCL IARK+
Sbjct: 241 KPGEATVVSTLSACTALKNLALGVEIHNYVRKELGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMY 420
           ALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFI 480
           SKCG VDKSLEIFY+L+EKDT+SWTSMICGLAMNG+TGEAL+LF+EMEL GAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALKLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPN 540
           GVLSACSHGGLVEEGRR+F+ MK VY+IEPKVEHYGC IDLLGRAG LDEAEELI+EIP+
Sbjct: 481 GVLSACSHGGLVEEGRRYFDSMKTVYRIEPKVEHYGCAIDLLGRAGRLDEAEELIREIPS 540

Query: 541 ENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDA 600
           END I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A RWEDA
Sbjct: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSMLDRVAGPLLGSKES 660
           K+VRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMM+ICSMLD V GPLLG KES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMEICSMLDSVVGPLLGPKES 660

Query: 661 HLESVMPLHMDVNIAV 677
            LE V+PLH+D  + +
Sbjct: 661 ELEIVIPLHIDGTVVL 676

[Close]
BLAST of Lcy08g007450 vs. ExPASy TrEMBL
Match: A0A6J1CTE5 (pentatricopeptide repeat-containing protein At1g31430 OS=Momordica charantia OX=3673 GN=LOC111014415 PE=4 SV=1)

HSP 1 Score: 1196.0 bits (3093), Expect = 0.0e+00
Identity = 578/666 (86.79%), Postives = 625/666 (93.84%), Query Frame = 0 

Query: 8   MLPLLVVGRIQFVSRYFSSTLHLVPISPRISKLTKKSCIEYLRNCKAMNQLKQIQSQIFR 67
           MLPL +V RI+ +SR+FSSTLH VPIS    KLTKKSCI+YLRNCK+M+Q KQIQ+ IFR
Sbjct: 1   MLPLSIVRRIELISRHFSSTLHSVPISSCSCKLTKKSCIQYLRNCKSMDQFKQIQTHIFR 60

Query: 68  IGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKRGIFRKVL 127
           IGLE+DRDT NK MAFCADPS+GNL YAER+FDY+Q P LFVYNVMVKAYAKRGIFRKV+
Sbjct: 61  IGLEQDRDTLNKSMAFCADPSLGNLRYAERVFDYIQEPCLFVYNVMVKAYAKRGIFRKVI 120

Query: 128 LLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVCNSLMDMY 187
           LLFQRL+ED LWPDNFTYPFVLKAIGCLRD+  GEK+HGFVVKTGM  DNYVCNSLMDMY
Sbjct: 121 LLFQRLKEDGLWPDNFTYPFVLKAIGCLRDLCHGEKIHGFVVKTGMDFDNYVCNSLMDMY 180

Query: 188 AELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSVFKEMQQESNEKPGEATV 247
           AELGK+E A+KLF EM T+DS+SWNV+ISGYVRCRRFEDA++ FKEMQ+ESN KPGEA +
Sbjct: 181 AELGKIEYAEKLFDEMHTKDSVSWNVLISGYVRCRRFEDAINTFKEMQRESNVKPGEAGI 240

Query: 248 VSTLSACTALKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKVFDEMLMK 307
           VSTLSACTALKNLELGEEIHNYVR ELGFTTIINNALLDMYAKCG L+IARKVFDEM MK
Sbjct: 241 VSTLSACTALKNLELGEEIHNYVRNELGFTTIINNALLDMYAKCGRLNIARKVFDEMPMK 300

Query: 308 NVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQ 367
           NVICWTSMISGYINCGDL+EARDLFD SPVRDVVLWTAMINGYVQFNHFDEAVALFR+MQ
Sbjct: 301 NVICWTSMISGYINCGDLKEARDLFDISPVRDVVLWTAMINGYVQFNHFDEAVALFRKMQ 360

Query: 368 IRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMYSKCGRVD 427
           I+KVKPDKFTVV+LLTGCAQLGALEQGKW+HGY+DENRITMDAVVGTALIEMYSKCG V+
Sbjct: 361 IQKVKPDKFTVVALLTGCAQLGALEQGKWMHGYLDENRITMDAVVGTALIEMYSKCGCVN 420

Query: 428 KSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFIGVLSACS 487
           KSLEIFYEL+EKDT+SWTS+ICGLAMNGKTGEALRLFSEMEL GAKPDDITFIGVLSACS
Sbjct: 421 KSLEIFYELEEKDTASWTSIICGLAMNGKTGEALRLFSEMELVGAKPDDITFIGVLSACS 480

Query: 488 HGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPNENDEIVI 547
           HGGLVEEGRRFFNLMKKVY+IEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPNEND+I++
Sbjct: 481 HGGLVEEGRRFFNLMKKVYRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPNENDQILV 540

Query: 548 PLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDAKKVRRKM 607
           PLYGALLSACRIHNNVDMGER++KKLVN +SCDSSIHTLLANIYASADRWEDAKKVRRKM
Sbjct: 541 PLYGALLSACRIHNNVDMGERLSKKLVNFESCDSSIHTLLANIYASADRWEDAKKVRRKM 600

Query: 608 KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSMLDRVAGPLLGSKE--SHLESV 667
           KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM++ICSMLDRV GPLLGSKE     E V
Sbjct: 601 KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMIEICSMLDRVTGPLLGSKEFQFEFERV 660

Query: 668 MPLHMD 672
           +PL +D
Sbjct: 661 VPLRLD 666

[Close]
BLAST of Lcy08g007450 vs. ExPASy TrEMBL
Match: A0A0A0LWP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G418260 PE=4 SV=1)

HSP 1 Score: 1188.3 bits (3073), Expect = 0.0e+00
Identity = 577/668 (86.38%), Postives = 621/668 (92.96%), Query Frame = 0 

Query: 4   QSFHMLPLLVVGRIQFVSRYFSSTLHLVPISPRISKLTKKSCIEYLRNCKAMNQLKQIQS 63
           QS HMLPL ++ R+QF+SR+FSS+ HLVP+  RISKLTKKSCIE LRNCK+M+QLKQIQS
Sbjct: 135 QSSHMLPLSIIRRVQFISRHFSSSPHLVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQS 194

Query: 64  QIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKRGIF 123
           QIFRIGLE DRDT NKLMAFCAD S+GNL YAE++F+YVQ PSLFVYNVMVK YAKRGI 
Sbjct: 195 QIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGIL 254

Query: 124 RKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVCNSL 183
           RKVLLLFQ+LRED LWPD FTYPFVLKAIGCLRDVRQGEKV GF+VKTGM  DNYV NSL
Sbjct: 255 RKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSL 314

Query: 184 MDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSVFKEMQQESNEKPG 243
           +DMY EL  VENAKKLF EM TRDS+SWNVMISGYVRCRRFEDA++ F+EMQQE NEKP 
Sbjct: 315 IDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPD 374

Query: 244 EATVVSTLSACTALKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKVFDE 303
           EATVVSTLSACTALKNLELG+EIHNYVRKELGFTT I+NALLDMYAKCGCL+IAR +FDE
Sbjct: 375 EATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDE 434

Query: 304 MLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALF 363
           M MKNVICWTSMISGYINCGDLREARDLFD+SPVRDVVLWTAMINGYVQF+HFD+AVALF
Sbjct: 435 MSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALF 494

Query: 364 REMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMYSKC 423
           REMQI++VKPDKFTVV+LLTGCAQLGALEQGKWIHGY+DENRITMD VVGTALIEMYSKC
Sbjct: 495 REMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKC 554

Query: 424 GRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFIGVL 483
           G VDKSLEIFYEL++KDT+SWTS+ICGLAMNGKT EALRLFSEME  GAKPDDITFIGVL
Sbjct: 555 GCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVL 614

Query: 484 SACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPNEND 543
           SACSHGGLVEEGRRFFN MKKV++IEPKVEHYGCVIDLLGRAGLLDEAEELIQEIP EN 
Sbjct: 615 SACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENC 674

Query: 544 EIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDAKKV 603
           EIV+PLYGALLSACRIHNNVDMGER+AKKL NI+SCDSSIHTLLANIYAS DRWEDAKKV
Sbjct: 675 EIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKV 734

Query: 604 RRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSMLDRVAGPLLGSKESHLE 663
           RRKMKELGVKKMPGCS IEVDGIVHEFLVGDPSHPEMM+ICSML+RV G LLG KES +E
Sbjct: 735 RRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQLLGLKESQVE 794

Query: 664 SVMPLHMD 672
           SVMPL+ D
Sbjct: 795 SVMPLYKD 802

[Close]
BLAST of Lcy08g007450 vs. ExPASy TrEMBL
Match: A0A5A7TXP7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00060 PE=4 SV=1)

HSP 1 Score: 1165.6 bits (3014), Expect = 0.0e+00
Identity = 566/661 (85.63%), Postives = 612/661 (92.59%), Query Frame = 0 

Query: 4   QSFHMLPLLVVGRIQFVSRYFSSTLHLVPISPRISKLTKKSCIEYLRNCKAMNQLKQIQS 63
           QS HMLPL ++ R+QF+SR+FSS+ HLV +  RISK TKKSCIEYLRNCK+M QLK+IQS
Sbjct: 54  QSSHMLPLSIIRRVQFISRHFSSSPHLVTVPIRISKPTKKSCIEYLRNCKSMEQLKRIQS 113

Query: 64  QIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKRGIF 123
           QIFRIGLE DRD  NKLMAFCAD S+GNL YAE++FDYVQ PSLFVYNVMVK YAKRG+ 
Sbjct: 114 QIFRIGLEGDRDIINKLMAFCADLSLGNLRYAEKIFDYVQDPSLFVYNVMVKMYAKRGLL 173

Query: 124 RKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVCNSL 183
           RKVLLLFQ+LRED+LWPDNFTYPFVLKAIGCLRDV QGEK+HGFVVKTGM  DNYVCNSL
Sbjct: 174 RKVLLLFQQLREDQLWPDNFTYPFVLKAIGCLRDVGQGEKLHGFVVKTGMNLDNYVCNSL 233

Query: 184 MDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSVFKEMQQESNEKPG 243
           MDMY+ELG VENAKKLF EM TRDS+SWNVMISGYV CRRFEDA++ F+EMQQE NEKP 
Sbjct: 234 MDMYSELGNVENAKKLFDEMTTRDSVSWNVMISGYVGCRRFEDAINTFREMQQEGNEKPD 293

Query: 244 EATVVSTLSACTALKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKVFDE 303
           EATVVSTLSACTALKNLELG+EIHNYVRKELGFT  I+NALLDMYAKCGCL+I+R +FDE
Sbjct: 294 EATVVSTLSACTALKNLELGDEIHNYVRKELGFTPRIDNALLDMYAKCGCLNISRNIFDE 353

Query: 304 MLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALF 363
           M MKNVICWTSMISGYINCGDLREARDLFD+SPVRDVVLWTAMINGYVQF+HFD+AVALF
Sbjct: 354 MPMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALF 413

Query: 364 REMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMYSKC 423
           REMQI+KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+DENRIT+D VVGTALIEMYSKC
Sbjct: 414 REMQIQKVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITIDVVVGTALIEMYSKC 473

Query: 424 GRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFIGVL 483
           G VDKSLEIFYEL++KDT+SWTS+ICGLAMNGKT EALRLFSEMEL GAKPDDITFIGVL
Sbjct: 474 GCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMELVGAKPDDITFIGVL 533

Query: 484 SACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPNEND 543
           SACSHGGLVEEGRRFFN MKKVY+IEPKVEHYGCV+DLLGRAGLLDEAEELIQEI  EN 
Sbjct: 534 SACSHGGLVEEGRRFFNSMKKVYRIEPKVEHYGCVVDLLGRAGLLDEAEELIQEISIENC 593

Query: 544 EIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDAKKV 603
           EIV+ LYGALLSACRIHNNVDMGER+AKKLVNI+ CDSSIH LLANIYASADRWEDAKKV
Sbjct: 594 EIVVSLYGALLSACRIHNNVDMGERLAKKLVNIEPCDSSIHALLANIYASADRWEDAKKV 653

Query: 604 RRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSMLDRVAGPLLGSKESHLE 663
           RRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPE ++I SML+RV+  LLG KES L 
Sbjct: 654 RRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPETIEIRSMLNRVSRQLLGLKESQLM 713

Query: 664 S 665
           S
Sbjct: 714 S 714

[Close]
BLAST of Lcy08g007450 vs. NCBI nr
Match: XP_022960435.1 (pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_022960436.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_022960437.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_022960438.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata])

HSP 1 Score: 1241.5 bits (3211), Expect = 0.0e+00
Identity = 599/676 (88.61%), Postives = 639/676 (94.53%), Query Frame = 0 

Query: 1   MGHQSFHMLPLLVVGRIQFVSRYFSSTLHLVPISPRISKLTKKSCIEYLRNCKAMNQLKQ 60
           MGH S HMLPLL+V RIQF SR++SS+LH+VPIS ++SKLTKKSCIEYLRNCK+M+QLKQ
Sbjct: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISSQLSKLTKKSCIEYLRNCKSMDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGLERDRDTTNKLMAFCADPSVGNL Y ERMFDY+QGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVC 180
           GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRD R+GEKVHGFVVKTGM  D YVC
Sbjct: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSVFKEMQQESNE 240
           NSLMDMYAELGKV NAKKLF EMP RDS+SWNV+ISGYVRCRRFEDAV+VFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKV 300
           KPGEATVVSTLSACTALKNLELG EIHNYVRK+LGFTTIINNALLDMYAKCGCL IARK+
Sbjct: 241 KPGEATVVSTLSACTALKNLELGVEIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMY 420
           ALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFI 480
           SKCG VDKSLEIFY+L+EKDT+SWTSMICGLAMNG+TGEALRLF+EMEL GAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPN 540
           GVLSACSHGGLVEEGRR+FN MK VY+IEPKVEHYGCVIDLLGRAG LDEAEELI+EIP+
Sbjct: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGQLDEAEELIREIPS 540

Query: 541 ENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDA 600
           END I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A RWEDA
Sbjct: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSMLDRVAGPLLGSKES 660
           K+VRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM++ICSMLD V GPLLG KES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660

Query: 661 HLESVMPLHMDVNIAV 677
            LE+V+PLH+D  + +
Sbjct: 661 ELETVIPLHIDGTVVL 676

[Close]
BLAST of Lcy08g007450 vs. NCBI nr
Match: KAG7025324.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1241.1 bits (3210), Expect = 0.0e+00
Identity = 598/676 (88.46%), Postives = 639/676 (94.53%), Query Frame = 0 

Query: 1   MGHQSFHMLPLLVVGRIQFVSRYFSSTLHLVPISPRISKLTKKSCIEYLRNCKAMNQLKQ 60
           MGH S HMLPLL+V RIQF SR++SS+LH+VPISP++SKLTKKSCIEYLRNCK+++QLKQ
Sbjct: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGLERDRDTTNKLMAFCADPSVGNL Y ERMFDY+QGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVC 180
           GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRD R+GEKVHGFVVKTGM  D YVC
Sbjct: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSVFKEMQQESNE 240
           NSLMDMYAELGKV NAKKLF EMP RDS+SWNV+ISGYVRCRRFEDAV+VFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKV 300
           KPGEATVVSTLSACTALKNLELG  IHNYVRK+LGFTTIINNALLDMYAKCGCL IARK+
Sbjct: 241 KPGEATVVSTLSACTALKNLELGAGIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMY 420
           ALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFI 480
           SKCG VDKSLEIFY+L+EKDT+SWTSMICGLAMNG+TGEALRLF+EMEL GAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPN 540
           GVLSACSHGGLVEEGRR+FN MK VY+IEPKVEHYGCVIDLLGRAG LDEAEELI+EIP+
Sbjct: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS 540

Query: 541 ENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDA 600
           END I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A RWEDA
Sbjct: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSMLDRVAGPLLGSKES 660
           K+VRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM++ICSMLD V GPLLG KES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKES 660

Query: 661 HLESVMPLHMDVNIAV 677
            LE+V+PLH+D  + +
Sbjct: 661 ELETVIPLHIDGTVVL 676

[Close]
BLAST of Lcy08g007450 vs. NCBI nr
Match: XP_023513900.1 (pentatricopeptide repeat-containing protein At1g31430 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513902.1 pentatricopeptide repeat-containing protein At1g31430 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1239.6 bits (3206), Expect = 0.0e+00
Identity = 598/676 (88.46%), Postives = 638/676 (94.38%), Query Frame = 0 

Query: 1   MGHQSFHMLPLLVVGRIQFVSRYFSSTLHLVPISPRISKLTKKSCIEYLRNCKAMNQLKQ 60
           MGH S HMLPLL+V RIQF SR++SS+LH+VPISP++SKLTKKSCIEYLRNCK+++QLKQ
Sbjct: 1   MGHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGLERDRDTTNKLMAFCADPSVGNL Y E+MFDY+QGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLRYTEKMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVC 180
           G FRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRD R+GEKVHGFVVKTGM  D YVC
Sbjct: 121 GSFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSVFKEMQQESNE 240
           NSLMDMYAELGKV NAKKLF EMP RDS+SWNV+ISGYVRCRRFEDAV+VFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKV 300
           KPGEATVVSTLSACTALKNLELG EIHNYVRKELGFTTIINNALLDMYAKCGCL IARK+
Sbjct: 241 KPGEATVVSTLSACTALKNLELGVEIHNYVRKELGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMY 420
           ALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFI 480
           SKCG VDKSLEIFY+L+EKDT+SWTSMICGLAMNG+TGEALRLF+EMEL GAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPN 540
           GVLSACSHGGLVEEGRR+FN MK VY+IEPKVEHYGCVIDLLGRAG LDEAEELI+EIP+
Sbjct: 481 GVLSACSHGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPS 540

Query: 541 ENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDA 600
           EN+ I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A RWEDA
Sbjct: 541 ENNAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSMLDRVAGPLLGSKES 660
           K+VRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMM+ICSMLD V GPLLG KES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMEICSMLDSVVGPLLGPKES 660

Query: 661 HLESVMPLHMDVNIAV 677
            LE V+PLH+D  + +
Sbjct: 661 ELEIVIPLHIDGTVVL 676

[Close]
BLAST of Lcy08g007450 vs. NCBI nr
Match: XP_023004947.1 (pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023004948.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023004949.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023004950.1 pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima])

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 597/676 (88.31%), Postives = 637/676 (94.23%), Query Frame = 0 

Query: 1   MGHQSFHMLPLLVVGRIQFVSRYFSSTLHLVPISPRISKLTKKSCIEYLRNCKAMNQLKQ 60
           M H S HMLPLL+V RIQF SR++SS+LH+VPISP++SKLTKKSCIEYLRNCK+M+QLKQ
Sbjct: 1   MRHPSSHMLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSMDQLKQ 60

Query: 61  IQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKR 120
           IQSQIFRIGL+RDRDTTNKLMAFCADPSVGNLHY ERMFDY+QGPSLFVYNVMVKAYAKR
Sbjct: 61  IQSQIFRIGLDRDRDTTNKLMAFCADPSVGNLHYTERMFDYIQGPSLFVYNVMVKAYAKR 120

Query: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVC 180
           GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRD R+GEKVHGFVVKTGM  D YVC
Sbjct: 121 GIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVC 180

Query: 181 NSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSVFKEMQQESNE 240
           NSLMDMYAELGKV NAKKLF EMP RDS+SWNV+ISGYVRCRRFEDAV+VFKEMQQESNE
Sbjct: 181 NSLMDMYAELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNE 240

Query: 241 KPGEATVVSTLSACTALKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKV 300
           KPGEATVVSTLSACTALKNL LG EIHNYVRKELGFTTIINNALLDMYAKCGCL IARK+
Sbjct: 241 KPGEATVVSTLSACTALKNLALGVEIHNYVRKELGFTTIINNALLDMYAKCGCLDIARKI 300

Query: 301 FDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360
           FDEM M+NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV
Sbjct: 301 FDEMPMRNVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAV 360

Query: 361 ALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMY 420
           ALFREMQ +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGTALIEMY
Sbjct: 361 ALFREMQFQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMY 420

Query: 421 SKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFI 480
           SKCG VDKSLEIFY+L+EKDT+SWTSMICGLAMNG+TGEAL+LF+EMEL GAKPDDITFI
Sbjct: 421 SKCGCVDKSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALKLFTEMELEGAKPDDITFI 480

Query: 481 GVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPN 540
           GVLSACSHGGLVEEGRR+F+ MK VY+IEPKVEHYGC IDLLGRAG LDEAEELI+EIP+
Sbjct: 481 GVLSACSHGGLVEEGRRYFDSMKTVYRIEPKVEHYGCAIDLLGRAGRLDEAEELIREIPS 540

Query: 541 ENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDA 600
           END I+IPLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A RWEDA
Sbjct: 541 ENDAILIPLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDA 600

Query: 601 KKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSMLDRVAGPLLGSKES 660
           K+VRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMM+ICSMLD V GPLLG KES
Sbjct: 601 KEVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMEICSMLDSVVGPLLGPKES 660

Query: 661 HLESVMPLHMDVNIAV 677
            LE V+PLH+D  + +
Sbjct: 661 ELEIVIPLHIDGTVVL 676

[Close]
BLAST of Lcy08g007450 vs. NCBI nr
Match: KAG6592918.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1232.6 bits (3188), Expect = 0.0e+00
Identity = 594/669 (88.79%), Postives = 635/669 (94.92%), Query Frame = 0 

Query: 8   MLPLLVVGRIQFVSRYFSSTLHLVPISPRISKLTKKSCIEYLRNCKAMNQLKQIQSQIFR 67
           MLPLL+V RIQF SR++SS+LH+VPISP++SKLTKKSCIEYLRNCK+++QLKQIQSQIFR
Sbjct: 1   MLPLLIVRRIQFFSRHYSSSLHVVPISPQLSKLTKKSCIEYLRNCKSLDQLKQIQSQIFR 60

Query: 68  IGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKRGIFRKVL 127
           IGLERDRDTTNKLMAFCADPSVGNL Y ERMFDY+QGPSLFVYNVMVKAYAKRGIFRKVL
Sbjct: 61  IGLERDRDTTNKLMAFCADPSVGNLRYTERMFDYIQGPSLFVYNVMVKAYAKRGIFRKVL 120

Query: 128 LLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVCNSLMDMY 187
           LLFQRLREDELWPDNFTYPFVLKAIGCLRD R+GEKVHGFVVKTGM  D YVCNSLMDMY
Sbjct: 121 LLFQRLREDELWPDNFTYPFVLKAIGCLRDARKGEKVHGFVVKTGMVCDTYVCNSLMDMY 180

Query: 188 AELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSVFKEMQQESNEKPGEATV 247
           AELGKV NAKKLF EMP RDS+SWNV+ISGYVRCRRFEDAV+VFKEMQQESNEKPGEATV
Sbjct: 181 AELGKVGNAKKLFDEMPRRDSVSWNVLISGYVRCRRFEDAVNVFKEMQQESNEKPGEATV 240

Query: 248 VSTLSACTALKNLELGEEIHNYVRKELGFTTIINNALLDMYAKCGCLSIARKVFDEMLMK 307
           VSTLSACTALKNLELG EIHNYVRK+LGFTTIINNALLDMYAKCGCL IARK+FDEM M+
Sbjct: 241 VSTLSACTALKNLELGVEIHNYVRKQLGFTTIINNALLDMYAKCGCLDIARKIFDEMPMR 300

Query: 308 NVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQ 367
           NVICWTSMIS YINCGDL EARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQ
Sbjct: 301 NVICWTSMISSYINCGDLTEARDLFDRSPVRDVVLWTAMINGYVQFNHFDEAVALFREMQ 360

Query: 368 IRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDENRITMDAVVGTALIEMYSKCGRVD 427
            +KVKPDKFTVV+LLTGCAQLGALEQGKWIHGY+ ENRITMD VVGTALIEMYSKCG VD
Sbjct: 361 FQKVKPDKFTVVALLTGCAQLGALEQGKWIHGYLVENRITMDTVVGTALIEMYSKCGCVD 420

Query: 428 KSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEMELGGAKPDDITFIGVLSACS 487
           KSLEIFY+L+EKDT+SWTSMICGLAMNG+TGEALRLF+EMEL GAKPDDITFIGVLSACS
Sbjct: 421 KSLEIFYQLEEKDTTSWTSMICGLAMNGETGEALRLFTEMELEGAKPDDITFIGVLSACS 480

Query: 488 HGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPNENDEIVI 547
           HGGLVEEGRR+FN MK VY+IEPKVEHYGCVIDLLGRAG LDEAEELI+EIP+END I+I
Sbjct: 481 HGGLVEEGRRYFNSMKTVYRIEPKVEHYGCVIDLLGRAGRLDEAEELIREIPSENDAILI 540

Query: 548 PLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLLANIYASADRWEDAKKVRRKM 607
           PLYGALLSACRIHNNVDMGER+AKKLVNI+SCDSSIHTLLANIYA A RWEDAK+VRRKM
Sbjct: 541 PLYGALLSACRIHNNVDMGERLAKKLVNIESCDSSIHTLLANIYAFAHRWEDAKEVRRKM 600

Query: 608 KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSMLDRVAGPLLGSKESHLESVMP 667
           KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEM++ICSMLD V GPLLG KES LE+V+P
Sbjct: 601 KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMVEICSMLDSVVGPLLGPKESELETVIP 660

Query: 668 LHMDVNIAV 677
           LH+D  + +
Sbjct: 661 LHIDGTVVL 669

[Close]
BLAST of Lcy08g007450 vs. TAIR 10
Match: AT1G31430.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 698.0 bits (1800), Expect = 7.6e-201
Identity = 337/565 (59.65%), Postives = 428/565 (75.75%), Query Frame = 0 

Query: 102 VQGPSLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQG 161
           +Q PSL +YN M+K+ A    F KVL LF  LR   L+PDNFT P VLK+IG LR V +G
Sbjct: 6   LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65

Query: 162 EKVHGFVVKTGMTNDNYVCNSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRC 221
           EKVHG+ VK G+  D+YV NSLM MYA LGK+E   K+F EMP RD +SWN +IS YV  
Sbjct: 66  EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125

Query: 222 RRFEDAVSVFKEMQQESNEKPGEATVVSTLSACTALKNLELGEEIHNYVRKELGFTTIIN 281
            RFEDA+ VFK M QESN K  E T+VSTLSAC+ALKNLE+GE I+ +V  E   +  I 
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185

Query: 282 NALLDMYAKCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVV 341
           NAL+DM+ KCGCL  AR VFD M  KNV CWTSM+ GY++ G + EAR LF+RSPV+DVV
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245

Query: 342 LWTAMINGYVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYI 401
           LWTAM+NGYVQFN FDEA+ LFR MQ   ++PD F +VSLLTGCAQ GALEQGKWIHGYI
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305

Query: 402 DENRITMDAVVGTALIEMYSKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEAL 461
           +ENR+T+D VVGTAL++MY+KCG ++ +LE+FYE++E+DT+SWTS+I GLAMNG +G AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365

Query: 462 RLFSEMELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDL 521
            L+ EME  G + D ITF+ VL+AC+HGG V EGR+ F+ M + + ++PK EH  C+IDL
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425

Query: 522 LGRAGLLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDS 581
           L RAGLLDEAEELI ++  E+DE ++P+Y +LLSA R + NV + ER+A+KL  ++  DS
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485

Query: 582 SIHTLLANIYASADRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDP--SHPE 641
           S HTLLA++YASA+RWED   VRRKMK+LG++K PGCSSIE+DG+ HEF+VGD   SHP+
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545

Query: 642 MMKICSMLDRVAGPLLGSKESHLES 665
           M +I SML +    +L  +   ++S
Sbjct: 546 MDEINSMLHQTTNLMLDLEHKEIDS 570

[Close]
BLAST of Lcy08g007450 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 524.2 bits (1349), Expect = 1.5e-148
Identity = 257/606 (42.41%), Postives = 397/606 (65.51%), Query Frame = 0 

Query: 46  IEYLRNCKAMNQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGP 105
           +  L  CK +  LKQIQ+Q+   GL  D   +++L+AFCA      L Y+ ++   ++ P
Sbjct: 57  LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116

Query: 106 SLFVYNVMVKAYAKRGIFRKVLLLF-QRLRED--ELWPDNFTYPFVLKAIGCLRDVRQGE 165
           ++F +NV ++ +++    ++  LL+ Q LR    E  PD+FTYP + K    LR    G 
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176

Query: 166 KVHGFVVKTGMTNDNYVCNSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCR 225
            + G V+K  +   ++V N+ + M+A  G +ENA+K+F E P RD +SWN +I+GY +  
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236

Query: 226 RFEDAVSVFKEMQQESNEKPGEATVVSTLSACTALKNLELGEEIHNYVRKE-LGFTTIIN 285
             E A+ V+K M+ E   KP + T++  +S+C+ L +L  G+E + YV++  L  T  + 
Sbjct: 237 EAEKAIYVYKLMESE-GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 296

Query: 286 NALLDMYAKCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVV 345
           NAL+DM++KCG +  AR++FD +  + ++ WT+MISGY  CG L  +R LFD    +DVV
Sbjct: 297 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 356

Query: 346 LWTAMINGYVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYI 405
           LW AMI G VQ     +A+ALF+EMQ    KPD+ T++  L+ C+QLGAL+ G WIH YI
Sbjct: 357 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 416

Query: 406 DENRITMDAVVGTALIEMYSKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEAL 465
           ++  ++++  +GT+L++MY+KCG + ++L +F+ +Q +++ ++T++I GLA++G    A+
Sbjct: 417 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 476

Query: 466 RLFSEMELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDL 525
             F+EM   G  PD+ITFIG+LSAC HGG+++ GR +F+ MK  + + P+++HY  ++DL
Sbjct: 477 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 536

Query: 526 LGRAGLLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDS 585
           LGRAGLL+EA+ L++ +P E D  V   +GALL  CR+H NV++GE+ AKKL+ +   DS
Sbjct: 537 LGRAGLLEEADRLMESMPMEADAAV---WGALLFGCRMHGNVELGEKAAKKLLELDPSDS 596

Query: 586 SIHTLLANIYASADRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMM 645
            I+ LL  +Y  A+ WEDAK+ RR M E GV+K+PGCSSIEV+GIV EF+V D S PE  
Sbjct: 597 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 656

Query: 646 KICSML 648
           KI   L
Sbjct: 657 KIYDRL 658

[Close]
BLAST of Lcy08g007450 vs. TAIR 10
Match: AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 500.0 bits (1286), Expect = 3.0e-141
Identity = 246/610 (40.33%), Postives = 399/610 (65.41%), Query Frame = 0 

Query: 46  IEYLRNCKAMNQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGP 105
           I  L  CK  +Q KQ+ SQ    G+  +     KL  F      G++ YA ++F  +  P
Sbjct: 38  ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97

Query: 106 SLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRD---VRQGE 165
            + V+N M+K ++K     + + L+  + ++ + PD+ T+PF+L   G  RD   +  G+
Sbjct: 98  DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN--GLKRDGGALACGK 157

Query: 166 KVHGFVVKTGMTNDNYVCNSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCR 225
           K+H  VVK G+ ++ YV N+L+ MY+  G ++ A+ +F      D  SWN+MISGY R +
Sbjct: 158 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 217

Query: 226 RFEDAVSVFKEMQQESNEKPGEATVVSTLSACTALKNLELGEEIHNYVRK-ELGFTTIIN 285
            +E+++ +  EM++ +   P   T++  LSAC+ +K+ +L + +H YV + +   +  + 
Sbjct: 218 EYEESIELLVEMER-NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 277

Query: 286 NALLDMYAKCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVV 345
           NAL++ YA CG + IA ++F  M  ++VI WTS++ GY+  G+L+ AR  FD+ PVRD +
Sbjct: 278 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 337

Query: 346 LWTAMINGYVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYI 405
            WT MI+GY++   F+E++ +FREMQ   + PD+FT+VS+LT CA LG+LE G+WI  YI
Sbjct: 338 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 397

Query: 406 DENRITMDAVVGTALIEMYSKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEAL 465
           D+N+I  D VVG ALI+MY KCG  +K+ ++F+++ ++D  +WT+M+ GLA NG+  EA+
Sbjct: 398 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 457

Query: 466 RLFSEMELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDL 525
           ++F +M+    +PDDIT++GVLSAC+H G+V++ R+FF  M+  ++IEP + HYGC++D+
Sbjct: 458 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 517

Query: 526 LGRAGLLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDS 585
           LGRAGL+ EA E+++++P   + IV   +GALL A R+HN+  M E  AKK++ ++  + 
Sbjct: 518 LGRAGLVKEAYEILRKMPMNPNSIV---WGALLGASRLHNDEPMAELAAKKILELEPDNG 577

Query: 586 SIHTLLANIYASADRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMM 645
           +++ LL NIYA   RW+D ++VRRK+ ++ +KK PG S IEV+G  HEF+ GD SH +  
Sbjct: 578 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 637

Query: 646 KICSMLDRVA 652
           +I   L+ +A
Sbjct: 638 EIYMKLEELA 641

[Close]
BLAST of Lcy08g007450 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 480.7 bits (1236), Expect = 1.9e-135
Identity = 231/608 (37.99%), Postives = 376/608 (61.84%), Query Frame = 0 

Query: 46  IEYLRNCKAMNQLKQIQSQIFRIGLERDRDTTNKLMAFCADPSVGNLHYAERMFDYVQGP 105
           I  +  C ++ QLKQ    + R G   D  + +KL A  A  S  +L YA ++FD +  P
Sbjct: 34  ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93

Query: 106 SLFVYNVMVKAYAK-RGIFRKVLLLFQRLREDELWPDNFTYPFVLKAIGCLRDVRQGEKV 165
           + F +N +++AYA        +      + E + +P+ +T+PF++KA   +  +  G+ +
Sbjct: 94  NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153

Query: 166 HGFVVKTGMTNDNYVCNSLMDMYAELGKVENAKKLFGEMPTRDSISWNVMISGYVRCRRF 225
           HG  VK+ + +D +V NSL+  Y   G +++A K+F  +  +D +SWN MI+G+V+    
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213

Query: 226 EDAVSVFKEMQQESNEKPGEATVVSTLSACTALKNLELGEEIHNYVRK-ELGFTTIINNA 285
           + A+ +FK+M+ E + K    T+V  LSAC  ++NLE G ++ +Y+ +  +     + NA
Sbjct: 214 DKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 273

Query: 286 LLDMYAKCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLW 345
           +LDMY KCG +  A+++FD M  K+ + WT+M+ GY    D   AR++ +  P +D+V W
Sbjct: 274 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 333

Query: 346 TAMINGYVQFNHFDEAVALFREMQIRK-VKPDKFTVVSLLTGCAQLGALEQGKWIHGYID 405
            A+I+ Y Q    +EA+ +F E+Q++K +K ++ T+VS L+ CAQ+GALE G+WIH YI 
Sbjct: 334 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 393

Query: 406 ENRITMDAVVGTALIEMYSKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALR 465
           ++ I M+  V +ALI MYSKCG ++KS E+F  ++++D   W++MI GLAM+G   EA+ 
Sbjct: 394 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 453

Query: 466 LFSEMELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLL 525
           +F +M+    KP+ +TF  V  ACSH GLV+E    F+ M+  Y I P+ +HY C++D+L
Sbjct: 454 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 513

Query: 526 GRAGLLDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSS 585
           GR+G L++A + I+ +P      V   +GALL AC+IH N+++ E    +L+ ++  +  
Sbjct: 514 GRSGYLEKAVKFIEAMPIPPSTSV---WGALLGACKIHANLNLAEMACTRLLELEPRNDG 573

Query: 586 IHTLLANIYASADRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMK 645
            H LL+NIYA   +WE+  ++R+ M+  G+KK PGCSSIE+DG++HEFL GD +HP   K
Sbjct: 574 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 633

Query: 646 ICSMLDRV 651
           +   L  V
Sbjct: 634 VYGKLHEV 637

[Close]
BLAST of Lcy08g007450 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 468.0 bits (1203), Expect = 1.3e-131
Identity = 245/663 (36.95%), Postives = 377/663 (56.86%), Query Frame = 0 

Query: 25  SSTLHLVPIS--PRISKLTKKSCIEYLRNCKAMNQLKQIQSQIFRIGLERDRDTTNKLMA 84
           S   H +P S  P    +     +  L NCK +  L+ I +Q+ +IGL       +KL+ 
Sbjct: 14  SYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE 73

Query: 85  FC-ADPSVGNLHYAERMFDYVQGPSLFVYNVMVKAYAKRGIFRKVLLLFQRLREDELWPD 144
           FC   P    L YA  +F  +Q P+L ++N M + +A        L L+  +    L P+
Sbjct: 74  FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 133

Query: 145 NFTYPFVLKAIGCLRDVRQGEKVHGFVVKTGMTNDNYVCNSLMDMYAELGK--------- 204
           ++T+PFVLK+    +  ++G+++HG V+K G   D YV  SL+ MY + G+         
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193

Query: 205 ----------------------VENAKKLFGEMPTRDSISWNVMISGYVRCRRFEDAVSV 264
                                 +ENA+KLF E+P +D +SWN MISGY     +++A+ +
Sbjct: 194 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253

Query: 265 FKEMQQESNEKPGEATVVSTLSACTALKNLELGEEIHNYVRKE-LGFTTIINNALLDMYA 324
           FK+M  ++N +P E+T+V+ +SAC    ++ELG ++H ++     G    I NAL+D+Y+
Sbjct: 254 FKDM-MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 313

Query: 325 KCGCLSIARKVFDEMLMKNVICWTSMISGYINCGDLREARDLFDRSPVRDVVLWTAMING 384
           KCG L  A                        CG       LF+R P +DV+ W  +I G
Sbjct: 314 KCGELETA------------------------CG-------LFERLPYKDVISWNTLIGG 373

Query: 385 YVQFNHFDEAVALFREMQIRKVKPDKFTVVSLLTGCAQLGALEQGKWIHGYIDE--NRIT 444
           Y   N + EA+ LF+EM      P+  T++S+L  CA LGA++ G+WIH YID+    +T
Sbjct: 374 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 433

Query: 445 MDAVVGTALIEMYSKCGRVDKSLEIFYELQEKDTSSWTSMICGLAMNGKTGEALRLFSEM 504
             + + T+LI+MY+KCG ++ + ++F  +  K  SSW +MI G AM+G+   +  LFS M
Sbjct: 434 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 493

Query: 505 ELGGAKPDDITFIGVLSACSHGGLVEEGRRFFNLMKKVYQIEPKVEHYGCVIDLLGRAGL 564
              G +PDDITF+G+LSACSH G+++ GR  F  M + Y++ PK+EHYGC+IDLLG +GL
Sbjct: 494 RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGL 553

Query: 565 LDEAEELIQEIPNENDEIVIPLYGALLSACRIHNNVDMGERIAKKLVNIQSCDSSIHTLL 624
             EAEE+I  +  E D ++   + +LL AC++H NV++GE  A+ L+ I+  +   + LL
Sbjct: 554 FKEAEEMINMMEMEPDGVI---WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 613

Query: 625 ANIYASADRWEDAKKVRRKMKELGVKKMPGCSSIEVDGIVHEFLVGDPSHPEMMKICSML 651
           +NIYASA RW +  K R  + + G+KK+PGCSSIE+D +VHEF++GD  HP   +I  ML
Sbjct: 614 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 641

The following BLAST results are available for this feature:
BLAST of Lcy08g007450 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C8661.1e-19959.65Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana OX... [more]
Q9SJZ32.1e-14742.41Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
Q9LSB84.3e-14040.33Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... [more]
O823802.7e-13437.99Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9LN011.8e-13036.95Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
BLAST of Lcy08g007450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H7E90.0e+0088.61pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita moschata OX=3... [more]
A0A6J1KW170.0e+0088.31pentatricopeptide repeat-containing protein At1g31430 OS=Cucurbita maxima OX=366... [more]
A0A6J1CTE50.0e+0086.79pentatricopeptide repeat-containing protein At1g31430 OS=Momordica charantia OX=... [more]
A0A0A0LWP80.0e+0086.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G418260 PE=4 SV=1[more]
A0A5A7TXP70.0e+0085.63Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Lcy08g007450 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960435.10.0e+0088.61pentatricopeptide repeat-containing protein At1g31430 [Cucurbita moschata] >XP_0... [more]
KAG7025324.10.0e+0088.46Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023513900.10.0e+0088.46pentatricopeptide repeat-containing protein At1g31430 isoform X1 [Cucurbita pepo... [more]
XP_023004947.10.0e+0088.31pentatricopeptide repeat-containing protein At1g31430 [Cucurbita maxima] >XP_023... [more]
KAG6592918.10.0e+0088.79Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
BLAST of Lcy08g007450 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G31430.17.6e-20159.65Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT2G22410.11.5e-14842.41SLOW GROWTH 1 [more]
AT3G15930.13.0e-14140.33Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G29760.11.9e-13537.99Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.11.3e-13136.95Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 524..544
NoneNo IPR availablePANTHERPTHR47928:SF123OS06G0597500 PROTEINcoord: 55..654
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 55..654
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 514..539
e-value: 0.0036
score: 17.5
coord: 209..237
e-value: 6.4E-9
score: 35.5
coord: 282..309
e-value: 6.6E-4
score: 19.7
coord: 311..334
e-value: 1.9E-5
score: 24.6
coord: 585..612
e-value: 0.024
score: 14.9
coord: 109..136
e-value: 0.0028
score: 17.8
coord: 179..206
e-value: 6.2E-5
score: 23.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 338..386
e-value: 1.3E-13
score: 50.9
coord: 439..487
e-value: 1.6E-9
score: 37.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 209..242
e-value: 3.4E-9
score: 34.3
coord: 443..475
e-value: 7.9E-7
score: 26.9
coord: 109..136
e-value: 6.2E-4
score: 17.8
coord: 310..334
e-value: 1.8E-4
score: 19.5
coord: 341..374
e-value: 3.4E-8
score: 31.2
coord: 178..206
e-value: 1.1E-4
score: 20.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 339..373
score: 12.24383
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 580..614
score: 9.262356
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 176..206
score: 9.503505
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 409..439
score: 8.692369
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 106..140
score: 10.029647
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 308..338
score: 8.845827
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 440..474
score: 11.673842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 207..241
score: 12.024604
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 156..262
e-value: 6.8E-22
score: 79.7
coord: 26..155
e-value: 2.7E-11
score: 45.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 415..628
e-value: 1.1E-41
score: 145.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 275..404
e-value: 9.5E-30
score: 106.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 169..334
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 319..604

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g007450.1Lcy08g007450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006338 chromatin remodeling
cellular_component GO:0000228 nuclear chromosome
cellular_component GO:0070603 SWI/SNF superfamily-type complex
molecular_function GO:0005515 protein binding