Lcy08g007280 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g007280
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger protein CONSTANS-LIKE 5-like
Location	Chr08: 9185270 .. 9186592 (-)
RNA-Seq Expression	Lcy08g007280
Synteny	Lcy08g007280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCTCCCGACATGGCTTCAATTCCTCAATTCTACAGTGACTATAATAACAATAATCCGACAACAACGGCAATATTTGGTAACGATTTCTGCGAGCTGCCGCCGCATCCAACGACGTCGTCTACTGTCGTCGGCGGCGTCGGCGCATTGTGGGGTGAAGAAAATCAAAATTTGGTTCCTTCTTCGTTCGACGATTTCGGGCTTCATCATGCGCCATCGTCGGCCCAATATTCTTCCGATCCGACGTCGTTTCAGATGCCCACATTGCCCGAACTTAATATCGGGCAATGCCAAAACTTTTGCCTTGGATGCCAACCGGATCAAGATCAAGATCATCACTTGTTTGAATTTCGAGACGATTGTTTCAGTTTGGTCCCTGAGATCAACCCACTTTACCACCCACTCCCTCCCGATAATTGGGTACTTATATTATCCATCATAAATTAATTTTTAATTTTTAATTTTTAATTGGGTACTTTATGTTATGTTTTTTTAATCATAGGAAATTCAAAGCAGTAGTCAAGTTCCTATGTCTGAAGACTCCAACATGAAGGTCGGCCGCTATTCTGAAGAAGTAAGAAAAGAAAGGATTCTCCGCTATTTGAAGAAGCGAAACCAAAGGAATTTCAACAAAACCATCAAGGTCAGGTCACGCATTTAATTTAATTTAATATAATATGATAATTAAATAAACTAGCTAGCTAACATGTATGTATTAATTAAAATTAAAACAGTATGCTTGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTCCGAGGGAGATTTGCGAGGAACAACGAAGCATGTGATCAAGAACTTAATAATCATCCAACAAAGAATAATATTAATATCGACAATTCTATCCACAACCATGATGTCGGTGTCCAGGTATCTATGAACAAACTGCCCAAATTAAATTAAAAAGGAAGATTATTATTATATATATATTCCCGATTGATATAATTTAATATTAATTAATCTCGTTTGCAGATGAAAAAGGATGAAGAAGAATGGCTGCAAGAGATCACGAGCTTAATGTATTTACCATATATCACTAGTTGAGACGAGATTATGGGAAATCAAAAGGGGGCGCAGCATGAATTAAAGCGATCGAGGAATATTTGGAATTAGATGCTTAATCCTTTTTTAATTAACTAATTAACCAGCTAATTAATGATATTATTATATTTATCGTCCTAGGATTTTGAAACATAGGAGAGTGACAGAAGGAACCTGAACCTGAGCATGTTATTCGACGTCTTTAATGTGGATTGATTAATTTTAAATTAATTAATGACTACTCTACTCCTTTGGTTGGGTA

mRNA sequence

TTCTCTCCCGACATGGCTTCAATTCCTCAATTCTACAGTGACTATAATAACAATAATCCGACAACAACGGCAATATTTGGTAACGATTTCTGCGAGCTGCCGCCGCATCCAACGACGTCGTCTACTGTCGTCGGCGGCGTCGGCGCATTGTGGGGTGAAGAAAATCAAAATTTGGTTCCTTCTTCGTTCGACGATTTCGGGCTTCATCATGCGCCATCGTCGGCCCAATATTCTTCCGATCCGACGTCGTTTCAGATGCCCACATTGCCCGAACTTAATATCGGGCAATGCCAAAACTTTTGCCTTGGATGCCAACCGGATCAAGATCAAGATCATCACTTGTTTGAATTTCGAGACGATTGTTTCAGTTTGGTCCCTGAGATCAACCCACTTTACCACCCACTCCCTCCCGATAATTGGGAAATTCAAAGCAGTAGTCAAGTTCCTATGTCTGAAGACTCCAACATGAAGGTCGGCCGCTATTCTGAAGAAGTAAGAAAAGAAAGGATTCTCCGCTATTTGAAGAAGCGAAACCAAAGGAATTTCAACAAAACCATCAAGTATGCTTGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTCCGAGGGAGATTTGCGAGGAACAACGAAGCATGTGATCAAGAACTTAATAATCATCCAACAAAGAATAATATTAATATCGACAATTCTATCCACAACCATGATGTCGGTGTCCAGATGAAAAAGGATGAAGAAGAATGGCTGCAAGAGATCACGAGCTTAATGTATTTACCATATATCACTAGTTGAGACGAGATTATGGGAAATCAAAAGGGGGCGCAGCATGAATTAAAGCGATCGAGGAATATTTGGAATTAGATGCTTAATCCTTTTTTAATTAACTAATTAACCAGCTAATTAATGATATTATTATATTTATCGTCCTAGGATTTTGAAACATAGGAGAGTGACAGAAGGAACCTGAACCTGAGCATGTTATTCGACGTCTTTAATGTGGATTGATTAATTTTAAATTAATTAATGACTACTCTACTCCTTTGGTTGGGTA

Coding sequence (CDS)

ATGGCTTCAATTCCTCAATTCTACAGTGACTATAATAACAATAATCCGACAACAACGGCAATATTTGGTAACGATTTCTGCGAGCTGCCGCCGCATCCAACGACGTCGTCTACTGTCGTCGGCGGCGTCGGCGCATTGTGGGGTGAAGAAAATCAAAATTTGGTTCCTTCTTCGTTCGACGATTTCGGGCTTCATCATGCGCCATCGTCGGCCCAATATTCTTCCGATCCGACGTCGTTTCAGATGCCCACATTGCCCGAACTTAATATCGGGCAATGCCAAAACTTTTGCCTTGGATGCCAACCGGATCAAGATCAAGATCATCACTTGTTTGAATTTCGAGACGATTGTTTCAGTTTGGTCCCTGAGATCAACCCACTTTACCACCCACTCCCTCCCGATAATTGGGAAATTCAAAGCAGTAGTCAAGTTCCTATGTCTGAAGACTCCAACATGAAGGTCGGCCGCTATTCTGAAGAAGTAAGAAAAGAAAGGATTCTCCGCTATTTGAAGAAGCGAAACCAAAGGAATTTCAACAAAACCATCAAGTATGCTTGTCGGAAAACCTTAGCCGACAGAAGGATTCGAGTCCGAGGGAGATTTGCGAGGAACAACGAAGCATGTGATCAAGAACTTAATAATCATCCAACAAAGAATAATATTAATATCGACAATTCTATCCACAACCATGATGTCGGTGTCCAGATGAAAAAGGATGAAGAAGAATGGCTGCAAGAGATCACGAGCTTAATGTATTTACCATATATCACTAGTTGA

Protein sequence

MASIPQFYSDYNNNNPTTTAIFGNDFCELPPHPTTSSTVVGGVGALWGEENQNLVPSSFDDFGLHHAPSSAQYSSDPTSFQMPTLPELNIGQCQNFCLGCQPDQDQDHHLFEFRDDCFSLVPEINPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELNNHPTKNNINIDNSIHNHDVGVQMKKDEEEWLQEITSLMYLPYITS

Homology

[Close]

BLAST of Lcy08g007280 vs. ExPASy Swiss-Prot
Match: Q9LKL2 (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=APRR1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.5e-05
Identity = 26/55 (47.27%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 162 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELNNHP 217
           R+E +L++ +KRNQR F+K I+Y  RK LA+RR RV+G+F R     + +LN  P
Sbjct: 533 REEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQP 587

[Close]

BLAST of Lcy08g007280 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 7.6e-05
Identity = 25/52 (48.08%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 162 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELN 214
           R+ R+LRY +K+  R F KTI+YA RK  A++R R++GRFA+  +  D+E N
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDV-DEEAN 336

[Close]

BLAST of Lcy08g007280 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-04
Identity = 43/159 (27.04%), Postives = 71/159 (44.65%), Query Frame = 0


Query: 56  PSSFDDFGLHHAPSSAQYSSDPTSFQMPTLPELNIGQC--QNFCLGCQPDQDQDHHLFEF 115
           P+SF+    HH  ++   S  P   +   LP  N   C   +FC             F +
Sbjct: 188 PNSFN----HHQNNAGGDSLVPVQTKTEPLPLTNNDHCFDIDFC-------RSKLSAFTY 247

Query: 116 RDDCFSLVPEINPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEEVRKERILRYLKKR 175
                S     + + + + PD     S ++  ++  +     + S   R+ R+LRY +KR
Sbjct: 248 PSQSVSHSVSTSSIEYGVVPDGNTNNSVNRSTITSSTTGGDHQASSMDREARVLRYREKR 307

Query: 176 NQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQEL 213
             R F KTI+YA RK  A+ R R++GRFA+  E  + ++
Sbjct: 308 KNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDDI 335

[Close]

BLAST of Lcy08g007280 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 23/50 (46.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 162 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQE 212
           R+ R+LRY +KR  R F KTI+YA RK  A+ R R++GRFA+  ++ + +
Sbjct: 229 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSREND 278

[Close]

BLAST of Lcy08g007280 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.9e-04
Identity = 39/99 (39.39%), Postives = 50/99 (50.51%), Query Frame = 0


Query: 120 LVPE----INPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEEVRKERILRYLKKRNQ 179
           +VPE    +    HP  P      +  Q P      + V + S   R+ R+LRY +KR  
Sbjct: 264 VVPESTACVTTASHPRTPKG----TVEQQPDPASQMITVTQLSPMDREARVLRYREKRKT 323

Query: 180 RNFNKTIKYACRKTLADRRIRVRGRFA-RNNEACDQELN 214
           R F KTI+YA RK  A+ R RV GRFA R  EA +Q  N
Sbjct: 324 RKFEKTIRYASRKAYAEIRPRVNGRFAKREIEAEEQGFN 358

[Close]

BLAST of Lcy08g007280 vs. ExPASy TrEMBL
Match: A0A6J1JLF7 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC111486274 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 5.2e-81
Identity = 181/282 (64.18%), Postives = 200/282 (70.92%), Query Frame = 0


Query: 1   MASIPQ-FYSDYNNNNPTTTAIFGNDFCELPPHPTTSSTVVGGVGALWGEENQNLVPSSF 60
           MASIPQ FY+DY      TT++  NDFCE  P PT       G G LWGEE   LVP  F
Sbjct: 1   MASIPQFFYTDYT----ATTSLIPNDFCEQRPPPTAPPL---GGGVLWGEE--TLVP-LF 60

Query: 61  DDFGLHHAP--SSAQYSS-----DPTSF---QMPTLPEL---------NIGQCQNFCLGC 120
           DDFGLHH P  S +QYSS      PTSF    M  LPEL         N   CQNFC+G 
Sbjct: 61  DDFGLHHQPPISPSQYSSHKPGLTPTSFPHQDMIALPELNTPSMCATNNAAPCQNFCVGY 120

Query: 121 QPDQDQDHHLFEFRDDCFSLVPEINPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEE 180
           QPD   DH LF++ DDCF LVPE  PLYHPLPPDNWEIQ S+QVP+SEDSNMKVGRYSEE
Sbjct: 121 QPD---DHPLFQYPDDCFRLVPETEPLYHPLPPDNWEIQ-SNQVPVSEDSNMKVGRYSEE 180

Query: 181 VRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELN----NHP 240
           VRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQ+LN    NH 
Sbjct: 181 VRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHT 240

Query: 241 TKNNINIDNSIHNHDVGVQMKKDEEEWLQEITSLMYLPYITS 259
           + + ++     +   VG Q KKDEEEW++E+T LMYLPYI+S
Sbjct: 241 SIHKVDTQLLYNQDHVGAQRKKDEEEWVEEMTGLMYLPYISS 268

[Close]

BLAST of Lcy08g007280 vs. ExPASy TrEMBL
Match: A0A6J1ES17 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437041 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 5.7e-80
Identity = 182/283 (64.31%), Postives = 201/283 (71.02%), Query Frame = 0


Query: 1   MASIPQFYSDYNNNNPTTTAIFGNDFCELPPHPTTSSTVVGGVGALWGEENQNLVPSSFD 60
           MASIPQF+  Y +   TTT+I  NDFCE  P PT  +    G G LWGEE    VP  FD
Sbjct: 1   MASIPQFF--YTDYTTTTTSIIPNDFCEQRPPPTAPAL---GGGVLWGEETS--VP-LFD 60

Query: 61  DFGLHHAP--SSAQYSS-----DPTSF---QMPTLPEL---------NIGQCQNFCLGCQ 120
           DFGLHH P  S +QYSS      PTSF    M  LP+L         N   CQ+FC+G Q
Sbjct: 61  DFGLHHQPPISPSQYSSHKPGLTPTSFPHQDMIALPQLNTPSICATNNAAPCQSFCVGYQ 120

Query: 121 PDQDQDHHLFEFRDDCFSLVPEINPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEEV 180
           PD   DH LF++ DDCF LVPE  PLYHPLPPDNWEIQ SSQVP+SEDSNMKVGRYSEEV
Sbjct: 121 PD---DHPLFQYPDDCFRLVPETEPLYHPLPPDNWEIQ-SSQVPVSEDSNMKVGRYSEEV 180

Query: 181 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELNNHPTKNNI 240
           RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQ+LN  PTK N 
Sbjct: 181 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLN--PTKINH 240

Query: 241 NIDNS-----IHNHD-VGVQMKKDEEEWLQEITSLMYLPYITS 259
              +      ++N D VG Q KKDEEEW++E+  LMYLPYI+S
Sbjct: 241 TCIHKADTQLLYNRDHVGAQRKKDEEEWVEEMRGLMYLPYISS 269

[Close]

BLAST of Lcy08g007280 vs. ExPASy TrEMBL
Match: A0A6J1I2H1 (uncharacterized protein LOC111468419 OS=Cucurbita maxima OX=3661 GN=LOC111468419 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 4.1e-78
Identity = 175/277 (63.18%), Postives = 199/277 (71.84%), Query Frame = 0


Query: 1   MASIPQFYSDYNNNNPTTTAIFGNDFCELPPHPTTSSTVVGGVGALWGEENQNLVPSSFD 60
           MASIPQFY DY    PT  A+F ND  +LPP PTT ST     G  WGEE   LVP  F 
Sbjct: 1   MASIPQFYPDY---TPTGAAMFPNDLYDLPP-PTTPSTAGTPGGPFWGEE--TLVP-LFH 60

Query: 61  DFGLHHAPS---SAQY------------SSDPTSFQMPTLPELNIGQCQNFCLGCQPDQD 120
           +FGL H PS   SAQY            + DPTSF    +P +N G CQN CL       
Sbjct: 61  EFGLLHPPSLSPSAQYCCDDKPSPPLSSAIDPTSFPQLNIPSIN-GGCQNSCL------- 120

Query: 121 QDHHLFEFRDDCFSLVPEINPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEEVRKER 180
            DHH  EF+DDCF LVPEI PLY PLPP NWEIQ S++VP++EDSN+KVGRYSEEVRKER
Sbjct: 121 -DHHFHEFQDDCFGLVPEIKPLYQPLPPHNWEIQ-SNEVPVAEDSNIKVGRYSEEVRKER 180

Query: 181 ILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELNNHPTKNN---IN 240
           ILRYLKKRNQRNF KTIKYACRKTLADRRIRVRGRFARNNEACDQE N  P KN+   ++
Sbjct: 181 ILRYLKKRNQRNFTKTIKYACRKTLADRRIRVRGRFARNNEACDQEPN--PAKNDTCILH 240

Query: 241 IDNS-IHNHDVGVQMKKDEEEWLQEITSLMYLPYITS 259
           +DN  ++NH++GVQ+KKDEEEW QE+ SLMYLPY++S
Sbjct: 241 MDNELVYNHELGVQLKKDEEEWEQEMRSLMYLPYMSS 258

[Close]

BLAST of Lcy08g007280 vs. ExPASy TrEMBL
Match: A0A6J1GNF3 (uncharacterized protein LOC111455505 OS=Cucurbita moschata OX=3662 GN=LOC111455505 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 8.6e-76
Identity = 171/277 (61.73%), Postives = 196/277 (70.76%), Query Frame = 0


Query: 1   MASIPQFYSDYNNNNPTTTAIFGNDFCELPPHPTTSSTVVGGVGALWGEENQNLVPSSFD 60
           MASIPQFYSDY    PT  A+F ND  +LPP PTT ST     G  WGEE   LVP  F 
Sbjct: 1   MASIPQFYSDY---TPTGAAMFANDLYDLPP-PTTPSTAATPGGPFWGEE--TLVP-LFH 60

Query: 61  DFGLHHAPS---SAQY------------SSDPTSFQMPTLPELNIGQCQNFCLGCQPDQD 120
           +FGL H PS   S QY            + DPTSF    +P +N G CQN CL       
Sbjct: 61  EFGLLHPPSLSPSPQYCCDDKPPPTLSSAIDPTSFPQLNIPSIN-GGCQNSCL------- 120

Query: 121 QDHHLFEFRDDCFSLVPEINPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEEVRKER 180
            DHH  EF+DDCF LVPE+ PL+ PLPP NWEIQ S++VP++EDSNMKV RYSEEVRK+R
Sbjct: 121 -DHHFHEFQDDCFGLVPEMKPLHQPLPPHNWEIQ-SNEVPVAEDSNMKVARYSEEVRKQR 180

Query: 181 ILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELNNHPTKNN---IN 240
           ILRYLKKRNQRNF KTIKYACRKTLADRRIRVRGRFARNNEACDQE N  P KN+   ++
Sbjct: 181 ILRYLKKRNQRNFTKTIKYACRKTLADRRIRVRGRFARNNEACDQEPN--PAKNDTCILH 240

Query: 241 IDNS-IHNHDVGVQMKKDEEEWLQEITSLMYLPYITS 259
           +DN  ++NH++GVQ+KKDEEEW QE+ SL YLP I+S
Sbjct: 241 MDNELVYNHELGVQLKKDEEEWEQEMRSLKYLPCISS 258

[Close]

BLAST of Lcy08g007280 vs. ExPASy TrEMBL
Match: A0A0A0K3I7 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237850 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.2e-55
Identity = 161/296 (54.39%), Postives = 182/296 (61.49%), Query Frame = 0


Query: 1   MASIP-QFYSDYNNNNPTTTAIFGNDFCELPPHPTTSSTVVGGVGALWGEE--NQNLVPS 60
           MASIP QFY D   +  T+ A          P PTT S  +G     WG+E  + NLVP 
Sbjct: 1   MASIPDQFYHD---DQYTSLA---------APPPTTPSVGIG-----WGDETADDNLVPL 60

Query: 61  SFDD-FG-LHHAP--------------SSAQYSSDPTSFQMPTLPELNIGQ--------- 120
             DD FG LHH P               SA +S  P    +P  P  +  Q         
Sbjct: 61  LEDDNFGALHHQPYTHPNQYYCSSNVIDSATWSF-PQQDMLPPFPSAHSHQNNKNARGSS 120

Query: 121 CQNF--CLGCQPDQDQDHHLF-EFRDDCFSLVPEINPLYH--PLPPDNWEIQSSSQVPMS 180
           CQ+F   LGCQ     DH LF EF DDCF LVPEI P ++  PLP  NW+ Q S+QV ++
Sbjct: 121 CQDFNSHLGCQL---PDHQLFSEFHDDCFGLVPEIKPSFYNNPLPTHNWDNQ-SNQVSVA 180

Query: 181 EDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA 240
           EDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFAR NEA
Sbjct: 181 EDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARKNEA 240

Query: 241 -CDQELNNHPTKNNINIDNS----IHNHDVGVQMKKDEEEWLQEITSLMYLPYITS 259
             DQELN     N+  I        ++HD GVQMK DEEEWLQ+I+SLMYLPYI+S
Sbjct: 241 ISDQELNPTIKNNDTTIQKDTELLYNHHDFGVQMKGDEEEWLQDISSLMYLPYISS 274

[Close]

BLAST of Lcy08g007280 vs. NCBI nr
Match: XP_023530352.1 (zinc finger protein CONSTANS-LIKE 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.5 bits (807), Expect = 4.4e-82
Identity = 182/282 (64.54%), Postives = 204/282 (72.34%), Query Frame = 0


Query: 1   MASIPQ-FYSDYNNNNPTTTAIFGNDFCELPPHPTTSSTVVGGVGALWGEENQNLVPSSF 60
           MAS+PQ FY+DY     TTT+I  NDFCE  P PT  +    G G LWGEE   LVP  F
Sbjct: 1   MASVPQFFYTDYT----TTTSIIPNDFCEQRPPPTAPAL---GGGVLWGEE--TLVP-LF 60

Query: 61  DDFGLHHAP--SSAQYSSD-----PTSF---QMPTLPEL---------NIGQCQNFCLGC 120
           DDFGLHH P  S +QYSSD     PTSF    M  LPEL         N   CQ+FC+G 
Sbjct: 61  DDFGLHHQPPISPSQYSSDKPGLTPTSFPHQDMIALPELNTPSICATNNAAPCQSFCVGY 120

Query: 121 QPDQDQDHHLFEFRDDCFSLVPEINPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEE 180
           QPD   DH LF++ D+CF LVPE  PLYHPLPPDNWEIQ S+QVP+SEDSNMKVGRYSEE
Sbjct: 121 QPD---DHPLFQYPDECFRLVPETEPLYHPLPPDNWEIQ-SNQVPVSEDSNMKVGRYSEE 180

Query: 181 VRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELN----NHP 240
           VRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQ+LN    NH 
Sbjct: 181 VRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHT 240

Query: 241 TKNNINIDNSIHNHDVGVQMKKDEEEWLQEITSLMYLPYITS 259
           + + ++     +   VG QMKKDEEEW++E+T LMYLPYI+S
Sbjct: 241 SIHKVDTQLLYNQDHVGAQMKKDEEEWVEEMTGLMYLPYISS 268

[Close]

BLAST of Lcy08g007280 vs. NCBI nr
Match: XP_022989100.1 (zinc finger protein CONSTANS-LIKE 5-like [Cucurbita maxima])

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-80
Identity = 181/282 (64.18%), Postives = 200/282 (70.92%), Query Frame = 0


Query: 1   MASIPQ-FYSDYNNNNPTTTAIFGNDFCELPPHPTTSSTVVGGVGALWGEENQNLVPSSF 60
           MASIPQ FY+DY      TT++  NDFCE  P PT       G G LWGEE   LVP  F
Sbjct: 1   MASIPQFFYTDYT----ATTSLIPNDFCEQRPPPTAPPL---GGGVLWGEE--TLVP-LF 60

Query: 61  DDFGLHHAP--SSAQYSS-----DPTSF---QMPTLPEL---------NIGQCQNFCLGC 120
           DDFGLHH P  S +QYSS      PTSF    M  LPEL         N   CQNFC+G 
Sbjct: 61  DDFGLHHQPPISPSQYSSHKPGLTPTSFPHQDMIALPELNTPSMCATNNAAPCQNFCVGY 120

Query: 121 QPDQDQDHHLFEFRDDCFSLVPEINPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEE 180
           QPD   DH LF++ DDCF LVPE  PLYHPLPPDNWEIQ S+QVP+SEDSNMKVGRYSEE
Sbjct: 121 QPD---DHPLFQYPDDCFRLVPETEPLYHPLPPDNWEIQ-SNQVPVSEDSNMKVGRYSEE 180

Query: 181 VRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELN----NHP 240
           VRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQ+LN    NH 
Sbjct: 181 VRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLNPTKINHT 240

Query: 241 TKNNINIDNSIHNHDVGVQMKKDEEEWLQEITSLMYLPYITS 259
           + + ++     +   VG Q KKDEEEW++E+T LMYLPYI+S
Sbjct: 241 SIHKVDTQLLYNQDHVGAQRKKDEEEWVEEMTGLMYLPYISS 268

[Close]

BLAST of Lcy08g007280 vs. NCBI nr
Match: XP_022930639.1 (zinc finger protein CONSTANS-LIKE 5-like [Cucurbita moschata])

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-79
Identity = 182/283 (64.31%), Postives = 201/283 (71.02%), Query Frame = 0


Query: 1   MASIPQFYSDYNNNNPTTTAIFGNDFCELPPHPTTSSTVVGGVGALWGEENQNLVPSSFD 60
           MASIPQF+  Y +   TTT+I  NDFCE  P PT  +    G G LWGEE    VP  FD
Sbjct: 1   MASIPQFF--YTDYTTTTTSIIPNDFCEQRPPPTAPAL---GGGVLWGEETS--VP-LFD 60

Query: 61  DFGLHHAP--SSAQYSS-----DPTSF---QMPTLPEL---------NIGQCQNFCLGCQ 120
           DFGLHH P  S +QYSS      PTSF    M  LP+L         N   CQ+FC+G Q
Sbjct: 61  DFGLHHQPPISPSQYSSHKPGLTPTSFPHQDMIALPQLNTPSICATNNAAPCQSFCVGYQ 120

Query: 121 PDQDQDHHLFEFRDDCFSLVPEINPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEEV 180
           PD   DH LF++ DDCF LVPE  PLYHPLPPDNWEIQ SSQVP+SEDSNMKVGRYSEEV
Sbjct: 121 PD---DHPLFQYPDDCFRLVPETEPLYHPLPPDNWEIQ-SSQVPVSEDSNMKVGRYSEEV 180

Query: 181 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELNNHPTKNNI 240
           RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQ+LN  PTK N 
Sbjct: 181 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQQLN--PTKINH 240

Query: 241 NIDNS-----IHNHD-VGVQMKKDEEEWLQEITSLMYLPYITS 259
              +      ++N D VG Q KKDEEEW++E+  LMYLPYI+S
Sbjct: 241 TCIHKADTQLLYNRDHVGAQRKKDEEEWVEEMRGLMYLPYISS 269

[Close]

BLAST of Lcy08g007280 vs. NCBI nr
Match: KAG7023006.1 (Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.4 bits (781), Expect = 4.5e-79
Identity = 176/281 (62.63%), Postives = 200/281 (71.17%), Query Frame = 0


Query: 1   MASIPQFYSDYNNNNPTTTAIFGNDFCELPPHPTTSSTVVGGVGALWGEENQNLVPSSFD 60
           MASIPQF+  Y +   TTT+I  NDFCE  P PT  +    G G LWGEE   LVP  FD
Sbjct: 1   MASIPQFF--YTDYTTTTTSIIPNDFCEQRPPPTAPAL---GGGVLWGEE--TLVP-LFD 60

Query: 61  DFGLHHAP--SSAQYSS-----DPTSF---QMPTLPEL---------NIGQCQNFCLGCQ 120
           DFGLHH P  S +QYSS      PTSF    +  LP+L         N   CQ+FC+G Q
Sbjct: 61  DFGLHHQPPISPSQYSSHKPGLTPTSFPHQDIIALPQLNTPSICATNNAAPCQSFCVGYQ 120

Query: 121 PDQDQDHHLFEFRDDCFSLVPEINPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEEV 180
           PD   DH LF++ DDCF LVPE  PLYHPLPPDNWEIQ S+QVP+SEDSNMKVGRYSEEV
Sbjct: 121 PD---DHPLFQYPDDCFRLVPETEPLYHPLPPDNWEIQ-SNQVPVSEDSNMKVGRYSEEV 180

Query: 181 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELN----NHPT 240
           RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACD++LN    NH +
Sbjct: 181 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDRQLNPTKINHTS 240

Query: 241 KNNINIDNSIHNHDVGVQMKKDEEEWLQEITSLMYLPYITS 259
            + ++     +   VG Q KKDEEEW++E+  LMYLPYI+S
Sbjct: 241 IHKVDTQLLYNRDHVGAQRKKDEEEWVEEMRGLMYLPYISS 269

[Close]

BLAST of Lcy08g007280 vs. NCBI nr
Match: KAG6589308.1 (Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302.8 bits (774), Expect = 2.9e-78
Identity = 174/281 (61.92%), Postives = 199/281 (70.82%), Query Frame = 0


Query: 1   MASIPQFYSDYNNNNPTTTAIFGNDFCELPPHPTTSSTVVGGVGALWGEENQNLVPSSFD 60
           MASIPQF+  Y +   TTT+I  NDFC+  P PT  +    G G LWGEE   L P  FD
Sbjct: 1   MASIPQFF--YTDYTTTTTSIIPNDFCDQRPPPTAPAL---GGGVLWGEE--TLAP-LFD 60

Query: 61  DFGLHHAP--SSAQYSS-----DPTSF---QMPTLPEL---------NIGQCQNFCLGCQ 120
           DFGLHH P  S +QYSS      PTSF    +  LP+L         N   CQ+FC+G Q
Sbjct: 61  DFGLHHQPPISPSQYSSHKPGLTPTSFPHQDIIALPQLNTPSICATNNAAPCQSFCVGYQ 120

Query: 121 PDQDQDHHLFEFRDDCFSLVPEINPLYHPLPPDNWEIQSSSQVPMSEDSNMKVGRYSEEV 180
           PD   DH LF++ DDCF LVPE  PLYHPLPPDNWEIQ S+QVP+SEDSNMKVGRYSEEV
Sbjct: 121 PD---DHPLFQYPDDCFRLVPETEPLYHPLPPDNWEIQ-SNQVPVSEDSNMKVGRYSEEV 180

Query: 181 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDQELN----NHPT 240
           RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACD++LN    NH +
Sbjct: 181 RKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEACDRQLNPTKINHTS 240

Query: 241 KNNINIDNSIHNHDVGVQMKKDEEEWLQEITSLMYLPYITS 259
            + ++     +   VG Q KKDEEEW++E+  LMYLPYI+S
Sbjct: 241 IHKVDTQLLYNRDHVGAQRKKDEEEWVEEMRGLMYLPYISS 269

[Close]

BLAST of Lcy08g007280 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 119.0 bits (297), Expect = 5.6e-27
Identity = 87/256 (33.98%), Postives = 132/256 (51.56%), Query Frame = 0


Query: 2   ASIPQFYSDYNNNNPTTTAIF-GNDFCELPPHPTTSSTVVGGVGALWGEENQNLVPSSFD 61
           +S+PQFY+D+   +  T++ F G+  C     P   S++   +   +G  N         
Sbjct: 3   SSLPQFYADFTTFSCETSSQFHGSSSC-----PDVDSSLSSYLDDCYGSFNT-------- 62

Query: 62  DFGLHHAPSSAQYSSDPTSFQMPT---LPELNIGQCQNFCLGCQPDQDQDHHLFEFRDDC 121
                        SS+P S  +P    + ++++ +  N+      +    +       + 
Sbjct: 63  -------------SSNPESIFVPQVFGISDVSVPEYNNYYQKMSVNNATHYFHGGDHQEY 122

Query: 122 FSLVPEINPLYHPLPPD-NWEIQSSSQVPMSEDSNMKVGRYSEEVRKERILRYLKKRNQR 181
           +   PEI PL+ P   + +W    +S+  +  + N KVGRYS E RK+RI+RYLKK+NQR
Sbjct: 123 YGFSPEIKPLFRPATGEQSW---GNSEGGIQAEPNTKVGRYSVEERKDRIMRYLKKKNQR 182

Query: 182 NFNKTIKYACRKTLADRRIRVRGRFARNNEACDQE---LNNHPTKNNINIDNSIHNHDVG 241
           NFNKTIKY CRKTLADRR+RVRGRFARNN+ C+++     NH   +    D    + D  
Sbjct: 183 NFNKTIKYVCRKTLADRRVRVRGRFARNNDTCEEQPHMSKNHNNHSEKEEDMFSGSDDYL 228

Query: 242 VQMKKDEEEWLQEITS 250
           +QM+ D + WL E  S
Sbjct: 243 IQMEHD-DGWLHEAMS 228

[Close]

BLAST of Lcy08g007280 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 95.9 bits (237), Expect = 5.1e-20
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 134 DNWEIQSSSQ---VPMSEDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTL 193
           +N E+Q SS+   +P SE+ N KVGRYS E RKE+I +Y  KRNQRNF KTIKYACRKTL
Sbjct: 184 NNMEMQRSSENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTL 243

Query: 194 ADRRIRVRGRFARNNEACD 210
           AD R R+RGRFARN+E  +
Sbjct: 244 ADSRPRIRGRFARNDEVVE 262

[Close]

BLAST of Lcy08g007280 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 82.4 bits (202), Expect = 5.8e-16
Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 140 SSSQVPMSEDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRG 199
           S + V   ++ +++VGRYS E RKE+I +Y  KR QRNF KTIKYACRKTLAD R RVRG
Sbjct: 170 SPTTVFSGDEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRG 229

Query: 200 RFARNNE 207
           RFARN+E
Sbjct: 230 RFARNDE 236

[Close]

BLAST of Lcy08g007280 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 82.0 bits (201), Expect = 7.6e-16
Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 148 EDSNM-KVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE 207
           EDS + KVG+ S E RKE+I RY+KKRN+RNFNK IKYACRKTLAD R RVRGRFA+N+E
Sbjct: 296 EDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDE 355

[Close]

BLAST of Lcy08g007280 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein )

HSP 1 Score: 82.0 bits (201), Expect = 7.6e-16
Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 0


Query: 148 EDSNM-KVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNE 207
           EDS + KVG+ S E RKE+I RY+KKRN+RNFNK IKYACRKTLAD R RVRGRFA+N+E
Sbjct: 295 EDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDE 354

The following BLAST results are available for this feature:

BLAST of Lcy08g007280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKL2	4.5e-05	47.27	Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
O50055	7.6e-05	48.08	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q9FHH8	1.0e-04	27.04	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]
Q9SK53	1.7e-04	46.00	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q39057	2.9e-04	39.39	Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1	[more]

BLAST of Lcy08g007280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JLF7	5.2e-81	64.18	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1ES17	5.7e-80	64.31	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I2H1	4.1e-78	63.18	uncharacterized protein LOC111468419 OS=Cucurbita maxima OX=3661 GN=LOC111468419...	[more]
A0A6J1GNF3	8.6e-76	61.73	uncharacterized protein LOC111455505 OS=Cucurbita moschata OX=3662 GN=LOC1114555...	[more]
A0A0A0K3I7	2.2e-55	54.39	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237850 PE=4 SV...	[more]

BLAST of Lcy08g007280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530352.1	4.4e-82	64.54	zinc finger protein CONSTANS-LIKE 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989100.1	1.1e-80	64.18	zinc finger protein CONSTANS-LIKE 5-like [Cucurbita maxima]	[more]
XP_022930639.1	1.2e-79	64.31	zinc finger protein CONSTANS-LIKE 5-like [Cucurbita moschata]	[more]
KAG7023006.1	4.5e-79	62.63	Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6589308.1	2.9e-78	61.92	Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Lcy08g007280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12890.1	5.6e-27	33.98	activator of spomin::LUC2	[more]
AT5G41380.1	5.1e-20	64.56	CCT motif family protein	[more]
AT1G63820.1	5.8e-16	64.18	CCT motif family protein	[more]
AT2G33350.1	7.6e-16	73.33	CCT motif family protein	[more]
AT2G33350.2	7.6e-16	73.33	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 162..204 e-value: 1.6E-16 score: 60.1
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 162..204 score: 14.8622
None	No IPR available	PANTHER	PTHR31717:SF56	ACTIVATOR OF SPOMIN::LUC2	coord: 1..258
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g007280.1	Lcy08g007280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding