Lcy08g006710 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g006710
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Chr08: 8458874 .. 8459506 (+)
RNA-Seq Expression	Lcy08g006710
Synteny	Lcy08g006710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGACGGAAATCAAGAACGAGATCAAAACCATAACCCAGAACAACATAATCAAAAGCATCGCTTTATAGGTGAATGCATCTCCATCTTCTTCCTCACCTTAAGCGTCGCAGCTCTCACTCTCTTTCTCGTCTACCGCCCGACGAACCCCCAATTCACGGTGGCCGGTGTCGACATACACGACCTGAACATGTCATCTCCGTCGCTGTTATCCACAACAATGCAGTTCACCATTGTTACAAGGAACCACAACAAGCAAGTTTCCATTTACTATGACAGACTCACTGCCTTTGTGCTGTATAGGAACCAACGGATAACGCCGCAGGTAATGTTGCCTCCGGTGTTTCATGAGAGGCAAAGCACAGTGACGATGTCGCCGATGCTCGGTGGCGGTCGGGCGGTGCCGGTGTCGTCTGAGGTGGTAAATGGATTGGTGTTGGCGACGAGTCAGGCTGGGGCTGTATGGCTGAGAGTTGTGTTGTTGGGGAGAGTAAAATGGAAAGTTGGATCAATAAAGATTGGTTATTATGCTTTGGGTGTGAAATGTGATGTGTTGGTGGGTTTGAAGAGAGGGTTTCTGGGTCCAGTTCCATTGCTCGGTTCTCCGACCTGCAAAGTTGATATTCAGTAG

mRNA sequence

ATGAATGACGGAAATCAAGAACGAGATCAAAACCATAACCCAGAACAACATAATCAAAAGCATCGCTTTATAGGTGAATGCATCTCCATCTTCTTCCTCACCTTAAGCGTCGCAGCTCTCACTCTCTTTCTCGTCTACCGCCCGACGAACCCCCAATTCACGGTGGCCGGTGTCGACATACACGACCTGAACATGTCATCTCCGTCGCTGTTATCCACAACAATGCAGTTCACCATTGTTACAAGGAACCACAACAAGCAAGTTTCCATTTACTATGACAGACTCACTGCCTTTGTGCTGTATAGGAACCAACGGATAACGCCGCAGGTAATGTTGCCTCCGGTGTTTCATGAGAGGCAAAGCACAGTGACGATGTCGCCGATGCTCGGTGGCGGTCGGGCGGTGCCGGTGTCGTCTGAGGTGGTAAATGGATTGGTGTTGGCGACGAGTCAGGCTGGGGCTGTATGGCTGAGAGTTGTGTTGTTGGGGAGAGTAAAATGGAAAGTTGGATCAATAAAGATTGGTTATTATGCTTTGGGTGTGAAATGTGATGTGTTGGTGGGTTTGAAGAGAGGGTTTCTGGGTCCAGTTCCATTGCTCGGTTCTCCGACCTGCAAAGTTGATATTCAGTAG

Coding sequence (CDS)

ATGAATGACGGAAATCAAGAACGAGATCAAAACCATAACCCAGAACAACATAATCAAAAGCATCGCTTTATAGGTGAATGCATCTCCATCTTCTTCCTCACCTTAAGCGTCGCAGCTCTCACTCTCTTTCTCGTCTACCGCCCGACGAACCCCCAATTCACGGTGGCCGGTGTCGACATACACGACCTGAACATGTCATCTCCGTCGCTGTTATCCACAACAATGCAGTTCACCATTGTTACAAGGAACCACAACAAGCAAGTTTCCATTTACTATGACAGACTCACTGCCTTTGTGCTGTATAGGAACCAACGGATAACGCCGCAGGTAATGTTGCCTCCGGTGTTTCATGAGAGGCAAAGCACAGTGACGATGTCGCCGATGCTCGGTGGCGGTCGGGCGGTGCCGGTGTCGTCTGAGGTGGTAAATGGATTGGTGTTGGCGACGAGTCAGGCTGGGGCTGTATGGCTGAGAGTTGTGTTGTTGGGGAGAGTAAAATGGAAAGTTGGATCAATAAAGATTGGTTATTATGCTTTGGGTGTGAAATGTGATGTGTTGGTGGGTTTGAAGAGAGGGTTTCTGGGTCCAGTTCCATTGCTCGGTTCTCCGACCTGCAAAGTTGATATTCAGTAG

Protein sequence

MNDGNQERDQNHNPEQHNQKHRFIGECISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIVTRNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEVVNGLVLATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGLKRGFLGPVPLLGSPTCKVDIQ

Homology

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BLAST of Lcy08g006710 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.8e-20
Identity = 54/160 (33.75%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 31  FFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIVTRNHNKQVSI 90
           F + + +    ++++ +PT P+F +    ++  N+S P+LL++  Q TI +RN N ++ I
Sbjct: 28  FIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSRIGI 87

Query: 91  YYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEVVNGLVLATS 150
           YYDRL  +  YRNQ+IT +  +PP +   +     SP +  G +VP++    N + L   
Sbjct: 88  YYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFV-YGNSVPIAP--FNAVALGDE 147

Query: 151 Q-AGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGL 190
           Q  G V L +   GRV+WKVG++  G Y L V+C   + L
Sbjct: 148 QNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINL 184

[Close]

BLAST of Lcy08g006710 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-17
Identity = 56/181 (30.94%), Postives = 96/181 (53.04%), Query Frame = 0


Query: 10  QNHNPEQHNQKHRFIGECISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSS-- 69
           +NH   +     R     I + F+ + +  L ++ + +P+ P+F +    ++  N+S   
Sbjct: 5   ENHGHSRRKLIRRIFWSIIFVLFI-IFLTILLIWAILQPSKPRFILQDATVYAFNVSGNP 64

Query: 70  PSLLSTTMQFTIVTRNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSP 129
           P+LL++  Q T+ +RN N ++ IYYDRL  +  YR+Q+IT    +PP +   +     SP
Sbjct: 65  PNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIWSP 124

Query: 130 MLGGGRAVPVSSEVVNGLVLATSQAGAVWLRVVLL-GRVKWKVGSIKIGYYALGVKCDVL 188
            +  G +VP++    NG+ L T +   V L ++   GRV+WKVG+   G Y L VKC   
Sbjct: 125 FV-YGTSVPIAP--FNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAY 181

[Close]

BLAST of Lcy08g006710 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-17
Identity = 53/182 (29.12%), Postives = 97/182 (53.30%), Query Frame = 0


Query: 18  NQKHRFIGECISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNM--SSPSLLSTTM 77
           N +H+ +    S FF  L +    ++L+  P  P+F++   DI+ LN+  SS  LL++++
Sbjct: 21  NNRHKKLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSV 80

Query: 78  QFTIVTRNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAV 137
           Q T+ ++N NK+V IYYD+L  +  YR Q+IT +  LPP F++    + +      G  +
Sbjct: 81  QLTLFSKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPP-FYQSHEEINLLTAFLQGTEL 140

Query: 138 PVSSEVVNGLVLATSQA-GAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGLKRGFL 197
           PV+     G  ++  ++ G + + + + G+++WK+G+   G Y   V C  +V       
Sbjct: 141 PVAQSF--GYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFGMNMT 199

[Close]

BLAST of Lcy08g006710 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.4e-10
Identity = 43/161 (26.71%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 28  ISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIVTRNHNKQ 87
           + I  +   ++   L+L+YRP  P++++ G  +  +N++S S +S +   T+ +RN N +
Sbjct: 82  VFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGK 141

Query: 88  VSIYYDRLTAF-VLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEVVNGLV 147
           + +YY++ ++  V Y +  I+  VM  PVF++    VT+  ++  G  + ++S +   + 
Sbjct: 142 IGVYYEKESSVDVYYNDVDISNGVM--PVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMR 201

Query: 148 LATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLV 188
              S+   V  ++ +   VK K GS+K     + V CDV V
Sbjct: 202 NEVSKK-TVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV 239

[Close]

BLAST of Lcy08g006710 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.6e-08
Identity = 45/165 (27.27%), Postives = 81/165 (49.09%), Query Frame = 0


Query: 23  FIGECISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSP-SLLSTTMQFTIVT 82
           F+   IS+  + L VAAL  +L+ RP   +F V    +   + +SP ++L   +  T+  
Sbjct: 41  FVKVIISLIVI-LGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPV 100

Query: 83  RNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEV 142
           RN NK++ +YYDR+ A   Y  +R +  + L P +   ++T  ++P   G   V + +  
Sbjct: 101 RNPNKRIGLYYDRIEAHAYYEGKRFS-TITLTPFYQGHKNTTVLTPTFQGQNLV-IFNAG 160

Query: 143 VNGLVLATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVL 187
            +  + A   +G   + +    RV++K+G +K       V CD L
Sbjct: 161 QSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDL 202

[Close]

BLAST of Lcy08g006710 vs. ExPASy TrEMBL
Match: A0A6J1CWG5 (NDR1/HIN1-like protein 12 OS=Momordica charantia OX=3673 GN=LOC111015429 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.8e-64
Identity = 132/198 (66.67%), Postives = 157/198 (79.29%), Query Frame = 0


Query: 14  PEQHNQK--HRFIGECISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLL 73
           P Q+  K  HR +  CISIF L + V AL L+LVYRPT+PQFTV    I+DLNMSSP LL
Sbjct: 30  PSQYYSKSTHRSVCACISIFLLMIGVVALILWLVYRPTDPQFTVVSAAIYDLNMSSPPLL 89

Query: 74  STTMQFTIVTRNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGG 133
           STTMQFTI+TRN N++VSIYYDRLTAFV YRNQ+IT QVMLPP+FHE++ST+ MSP+LGG
Sbjct: 90  STTMQFTIITRNPNRRVSIYYDRLTAFVSYRNQQITSQVMLPPLFHEKRSTLAMSPVLGG 149

Query: 134 GRAVPVSSEVVNGLVLATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGLKR 193
           G AVP S EVVNGLV      G + LRV LLGR++WK G +K G+Y++ V+CDVLVG+KR
Sbjct: 150 G-AVPTSLEVVNGLV-TDQTIGVIGLRVALLGRIRWKAGLVKTGHYSVYVRCDVLVGVKR 209

Query: 194 GFLGPVPLLGSPTCKVDI 210
           G +G VPLLGSP CKVDI
Sbjct: 210 GLVGQVPLLGSPACKVDI 225

[Close]

BLAST of Lcy08g006710 vs. ExPASy TrEMBL
Match: A0A5N6QME8 (LEA_2 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003731 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 2.0e-59
Identity = 122/183 (66.67%), Postives = 147/183 (80.33%), Query Frame = 0


Query: 27  CISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIVTRNHNK 86
           CI+IF L + V ALTL+LVYRP  PQF V G  I+++N S+P L+S TMQFT+VTRN NK
Sbjct: 17  CITIFLLLIGVTALTLWLVYRPHKPQFKVVGAAIYEINTSAPPLISITMQFTLVTRNPNK 76

Query: 87  QVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEVVNGLV 146
           +VSIYYDRL+AFV YR+Q ITPQVMLPP+FHER STV +SP++GGG AVPVS EV NGLV
Sbjct: 77  RVSIYYDRLSAFVSYRDQAITPQVMLPPLFHERHSTVVVSPLVGGG-AVPVSVEVANGLV 136

Query: 147 LATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGLKRGFLGPVPLLGSPTCK 206
                 G V LR+ LLGR++WK G+I+ G+Y + VKCDVLVGLK+GF+G VPLLGSP CK
Sbjct: 137 -EDEAYGVVGLRLALLGRLRWKAGAIRTGHYGVYVKCDVLVGLKKGFVGQVPLLGSPGCK 196

Query: 207 VDI 210
           VDI
Sbjct: 197 VDI 197

[Close]

BLAST of Lcy08g006710 vs. ExPASy TrEMBL
Match: A0A0A0L882 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116630 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 5.9e-59
Identity = 125/188 (66.49%), Postives = 148/188 (78.72%), Query Frame = 0


Query: 22  RFIGECISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIVT 81
           R +  CISIF L + V ALTL+LVYRP +PQFTV G  I+DLNMSS  LLSTTMQFTIVT
Sbjct: 37  RSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVT 96

Query: 82  RNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEV 141
           RN N++VSIYYDRLT FV YRNQ+IT QV+LPP+ HE++STV MSP+LGGG AV VS EV
Sbjct: 97  RNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGG-AVAVSLEV 156

Query: 142 VNGLVLATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGLKRGFLGPVPLLG 201
            NGLV      G + LRVVLLGR++WK G +K G Y++ VKCDVLVG+KRG +G +P+L 
Sbjct: 157 ANGLV-TDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLA 216

Query: 202 SPTCKVDI 210
           SP CKVDI
Sbjct: 217 SPPCKVDI 222

[Close]

BLAST of Lcy08g006710 vs. ExPASy TrEMBL
Match: A0A540MGF2 (LEA_2 domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_016930 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 7.8e-59
Identity = 119/189 (62.96%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 21  HRFIGECISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIV 80
           +R +  C+SIF L   V ALTL+LVYRP  PQFT+ G  ++ LN++SP L+STTMQFT+V
Sbjct: 10  YRALCTCLSIFLLLAGVTALTLWLVYRPHKPQFTIVGAAVYSLNVTSPPLISTTMQFTLV 69

Query: 81  TRNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSE 140
           TRN N++VSIYYDRL+AFV Y+NQ ITPQV LPP+ HE +STV +SP+LGGG  VPV+ E
Sbjct: 70  TRNPNRRVSIYYDRLSAFVAYKNQAITPQVGLPPLVHEHRSTVAVSPVLGGGE-VPVAVE 129

Query: 141 VVNGLVLATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGLKRGFLGPVPLL 200
           VVNGL++     G V LRVV+ GR++WK G+I+ G+Y + VKCDVLVGLKRGF+G VPLL
Sbjct: 130 VVNGLMM-DEVYGVVGLRVVVTGRLRWKAGAIRTGHYGIYVKCDVLVGLKRGFVGQVPLL 189

Query: 201 GSPTCKVDI 210
           G+P CKVDI
Sbjct: 190 GNPACKVDI 196

[Close]

BLAST of Lcy08g006710 vs. ExPASy TrEMBL
Match: A0A5D3DAX9 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00030 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.3e-58
Identity = 134/224 (59.82%), Postives = 163/224 (72.77%), Query Frame = 0


Query: 1   MNDGNQERDQNHN----PEQHNQ---KHRFIGE--------CISIFFLTLSVAALTLFLV 60
           M + N+E+D  HN     E+ N+    HR+  +        CISIF L + V ALTL+LV
Sbjct: 1   MAERNEEQDDVHNKRDLKEEKNRARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLV 60

Query: 61  YRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIVTRNHNKQVSIYYDRLTAFVLYRNQR 120
           YRP +PQFTV G  I+DLNMSS  LLSTTMQFTIVTRN N++VSIYYDRLT FV YRNQ+
Sbjct: 61  YRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQ 120

Query: 121 ITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEVVNGLVLATSQAGAVWLRVVLLGRV 180
           IT QV+LPP+ HE++STV MSP+LGGG AV VS EV NGLV      G + LRVVLLGR+
Sbjct: 121 ITSQVILPPLAHEKRSTVAMSPVLGGG-AVAVSLEVANGLV-TDQTIGVLGLRVVLLGRL 180

Query: 181 KWKVGSIKIGYYALGVKCDVLVGLKRGFLGPVPLLGSPTCKVDI 210
           +WK G +K G YA+ VKCDVL+G+KRG +G +P+L SP CKVDI
Sbjct: 181 RWKAGPLKTGRYAVYVKCDVLMGVKRGLVGQLPMLASPPCKVDI 222

[Close]

BLAST of Lcy08g006710 vs. NCBI nr
Match: XP_022146145.1 (NDR1/HIN1-like protein 12 [Momordica charantia])

HSP 1 Score: 255.0 bits (650), Expect = 5.7e-64
Identity = 132/198 (66.67%), Postives = 157/198 (79.29%), Query Frame = 0


Query: 14  PEQHNQK--HRFIGECISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLL 73
           P Q+  K  HR +  CISIF L + V AL L+LVYRPT+PQFTV    I+DLNMSSP LL
Sbjct: 30  PSQYYSKSTHRSVCACISIFLLMIGVVALILWLVYRPTDPQFTVVSAAIYDLNMSSPPLL 89

Query: 74  STTMQFTIVTRNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGG 133
           STTMQFTI+TRN N++VSIYYDRLTAFV YRNQ+IT QVMLPP+FHE++ST+ MSP+LGG
Sbjct: 90  STTMQFTIITRNPNRRVSIYYDRLTAFVSYRNQQITSQVMLPPLFHEKRSTLAMSPVLGG 149

Query: 134 GRAVPVSSEVVNGLVLATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGLKR 193
           G AVP S EVVNGLV      G + LRV LLGR++WK G +K G+Y++ V+CDVLVG+KR
Sbjct: 150 G-AVPTSLEVVNGLV-TDQTIGVIGLRVALLGRIRWKAGLVKTGHYSVYVRCDVLVGVKR 209

Query: 194 GFLGPVPLLGSPTCKVDI 210
           G +G VPLLGSP CKVDI
Sbjct: 210 GLVGQVPLLGSPACKVDI 225

[Close]

BLAST of Lcy08g006710 vs. NCBI nr
Match: KAE7999283.1 (hypothetical protein FH972_003731 [Carpinus fangiana])

HSP 1 Score: 238.8 bits (608), Expect = 4.2e-59
Identity = 122/183 (66.67%), Postives = 147/183 (80.33%), Query Frame = 0


Query: 27  CISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIVTRNHNK 86
           CI+IF L + V ALTL+LVYRP  PQF V G  I+++N S+P L+S TMQFT+VTRN NK
Sbjct: 17  CITIFLLLIGVTALTLWLVYRPHKPQFKVVGAAIYEINTSAPPLISITMQFTLVTRNPNK 76

Query: 87  QVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEVVNGLV 146
           +VSIYYDRL+AFV YR+Q ITPQVMLPP+FHER STV +SP++GGG AVPVS EV NGLV
Sbjct: 77  RVSIYYDRLSAFVSYRDQAITPQVMLPPLFHERHSTVVVSPLVGGG-AVPVSVEVANGLV 136

Query: 147 LATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGLKRGFLGPVPLLGSPTCK 206
                 G V LR+ LLGR++WK G+I+ G+Y + VKCDVLVGLK+GF+G VPLLGSP CK
Sbjct: 137 -EDEAYGVVGLRLALLGRLRWKAGAIRTGHYGVYVKCDVLVGLKKGFVGQVPLLGSPGCK 196

Query: 207 VDI 210
           VDI
Sbjct: 197 VDI 197

[Close]

BLAST of Lcy08g006710 vs. NCBI nr
Match: XP_038899063.1 (NDR1/HIN1-like protein 12 [Benincasa hispida])

HSP 1 Score: 238.0 bits (606), Expect = 7.2e-59
Identity = 135/226 (59.73%), Postives = 162/226 (71.68%), Query Frame = 0


Query: 1   MNDGNQERDQNHNPEQHNQK----------------HRFIGECISIFFLTLSVAALTLFL 60
           M + N+E+D  HN     ++                 R +  CISIF L + V ALTL+L
Sbjct: 1   MAERNEEQDDVHNQRDLKEEKKRARLFSSRYDSKSTRRSVCACISIFLLIIGVVALTLWL 60

Query: 61  VYRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIVTRNHNKQVSIYYDRLTAFVLYRNQ 120
           VYRP +PQFTV G  I+DLNMSS  LLSTTMQFTIVTRN N++VSIYYDRL AFV YRNQ
Sbjct: 61  VYRPIHPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLIAFVSYRNQ 120

Query: 121 RITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEVVNGLVLATSQA-GAVWLRVVLLG 180
           +IT QVMLPP+ HE++STV MSP+LGGG AV VS EV NGLV  T QA G + LRVVLLG
Sbjct: 121 QITSQVMLPPLVHEKRSTVAMSPVLGGG-AVAVSLEVANGLV--TDQAIGVLGLRVVLLG 180

Query: 181 RVKWKVGSIKIGYYALGVKCDVLVGLKRGFLGPVPLLGSPTCKVDI 210
           R++WK G +K G YA+ VKCDVLVG+KRG +G +P+L SP CKVD+
Sbjct: 181 RLRWKAGPLKTGRYAVYVKCDVLVGVKRGLVGQLPMLASPACKVDV 223

[Close]

BLAST of Lcy08g006710 vs. NCBI nr
Match: XP_009366593.1 (PREDICTED: NDR1/HIN1-like protein 12 [Pyrus x bretschneideri])

HSP 1 Score: 237.7 bits (605), Expect = 9.4e-59
Identity = 124/208 (59.62%), Postives = 157/208 (75.48%), Query Frame = 0


Query: 6   QERDQNHNPEQHNQK----HRFIGECISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIH 65
           +E   +H P+    K    +R +  C+SIF L   V ALTL+LVYRP  PQFT+ G  ++
Sbjct: 8   EETPDHHLPKMTKDKPSVPYRALCTCLSIFLLLAGVTALTLWLVYRPHKPQFTIVGAAVY 67

Query: 66  DLNMSSPSLLSTTMQFTIVTRNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQS 125
            LN++SP L+STTMQFTIVTRN N++VSIYYDRL+AFV Y+NQ ITPQV LPP+ HE +S
Sbjct: 68  SLNVTSPPLISTTMQFTIVTRNPNRRVSIYYDRLSAFVAYKNQAITPQVTLPPLVHEHRS 127

Query: 126 TVTMSPMLGGGRAVPVSSEVVNGLVLATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGV 185
           TV +SP+LGGG  VPV+ EVVNGLV+     G V LRVV+ GR++WK G+I+ G+Y + V
Sbjct: 128 TVAVSPVLGGGE-VPVAVEVVNGLVM-DEVYGVVGLRVVVTGRLRWKAGAIRTGHYGIYV 187

Query: 186 KCDVLVGLKRGFLGPVPLLGSPTCKVDI 210
           KCDVLVGLK+GF+G VPLLG+P CKVDI
Sbjct: 188 KCDVLVGLKKGFVGQVPLLGNPACKVDI 213

[Close]

BLAST of Lcy08g006710 vs. NCBI nr
Match: KAF3439782.1 (hypothetical protein FNV43_RR18060 [Rhamnella rubrinervis])

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-58
Identity = 122/182 (67.03%), Postives = 150/182 (82.42%), Query Frame = 0


Query: 28  ISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIVTRNHNKQ 87
           ++IF L + V ALTL+LVYRP  P+FTV G  ++DLN SS  L+STTMQFT+VTRN NK+
Sbjct: 23  LTIFLLLVGVTALTLWLVYRPHKPRFTVVGAAVYDLNTSSLPLISTTMQFTVVTRNPNKR 82

Query: 88  VSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEVVNGLVL 147
           VSIYYDRL+AFV YRNQ ITPQVMLPP+FH+ +STV MSP+LGGG  VPVS+EVVNGL++
Sbjct: 83  VSIYYDRLSAFVSYRNQAITPQVMLPPLFHKTKSTVAMSPVLGGG-TVPVSAEVVNGLMM 142

Query: 148 ATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGLKRGFLGPVPLLGSPTCKV 207
             S  G V LR+VLLGR++WK G+IK G+Y + VKCD+LVGLK+G +G VPLLG+P CKV
Sbjct: 143 DESY-GVVALRLVLLGRLRWKAGAIKTGHYGVYVKCDMLVGLKKGAVGQVPLLGNPGCKV 202

Query: 208 DI 210
           DI
Sbjct: 203 DI 202

[Close]

BLAST of Lcy08g006710 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-39
Identity = 85/188 (45.21%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 22  RFIGECISIFFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIVT 81
           R I   I    + L + AL L+LVYRP  P+ TV G  I+DLN ++P L+ST++QF+++ 
Sbjct: 42  RAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLA 101

Query: 82  RNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEV 141
           RN N++VSI+YD+L+ +V Y++Q ITP + LPP+    +STV ++P++ GG  +PVS EV
Sbjct: 102 RNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVM-GGNGIPVSPEV 161

Query: 142 VNGLVLATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGLKRGFLGPVPLLG 201
            NGL       G V +RVV+ GR++WK G+IK G Y    +CDV +       G VPLL 
Sbjct: 162 ANGL-KNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWLRFNPSSNGQVPLLA 221

Query: 202 SPTCKVDI 210
             TCKVD+
Sbjct: 222 PSTCKVDV 227

[Close]

BLAST of Lcy08g006710 vs. TAIR 10
Match: AT4G09590.1 (NDR1/HIN1-like 22 )

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22
Identity = 61/170 (35.88%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 22  RFIGECISIFFLTLSVAALTLFLVY---RPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFT 81
           R  G  I    + L    +T+FLV+   +P NP+F +    ++  N+S P+LL++  Q T
Sbjct: 21  RICGAIIGFIIIVL----MTIFLVWIILQPKNPEFILQDTTVYAFNLSQPNLLTSKFQIT 80

Query: 82  IVTRNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVS 141
           I +RN N  + IYYD L A+  YRNQ+IT    LPP +   +     SP+L G + VP++
Sbjct: 81  IASRNRNSNIGIYYDHLHAYASYRNQQITLASDLPPTYQRHKEDSVWSPLLYGNQ-VPIA 140

Query: 142 SEVVNGLVLATSQ-AGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLV 188
               N + L   Q +G   L + + G+V+WKVG++ IG Y L V+C   +
Sbjct: 141 P--FNAVALGDEQNSGVFTLTICVDGQVRWKVGTLTIGNYHLHVRCQAFI 183

[Close]

BLAST of Lcy08g006710 vs. TAIR 10
Match: AT2G35970.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 102.4 bits (254), Expect = 4.4e-22
Identity = 61/170 (35.88%), Postives = 92/170 (54.12%), Query Frame = 0


Query: 22  RFIGECISIFFLTLSVAALTLFLV---YRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFT 81
           R  G  I    + L    +T+FLV    +P  P+F +    ++  N+S P+LL++  Q T
Sbjct: 21  RICGAIIGFIIIVL----MTIFLVSIILQPKKPEFILQDTTVYAFNLSQPNLLTSKFQIT 80

Query: 82  IVTRNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVS 141
           I +RN N  + IYYD L A+  YRNQ+IT    LPP +   +     SP+L G + VP++
Sbjct: 81  IASRNRNSNIGIYYDHLHAYASYRNQQITLASDLPPTYQRHKENSVWSPLLYGNQ-VPIA 140

Query: 142 SEVVNGLVLATSQ-AGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLV 188
               N + L   Q +G   L + + GRV+WKVG++ IG Y L V+C   +
Sbjct: 141 P--FNAVALGDEQNSGVFTLTICVDGRVRWKVGTLTIGNYHLHVRCQAFI 183

[Close]

BLAST of Lcy08g006710 vs. TAIR 10
Match: AT2G35960.1 (NDR1/HIN1-like 12 )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 54/160 (33.75%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 31  FFLTLSVAALTLFLVYRPTNPQFTVAGVDIHDLNMSSPSLLSTTMQFTIVTRNHNKQVSI 90
           F + + +    ++++ +PT P+F +    ++  N+S P+LL++  Q TI +RN N ++ I
Sbjct: 28  FIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNSRIGI 87

Query: 91  YYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMSPMLGGGRAVPVSSEVVNGLVLATS 150
           YYDRL  +  YRNQ+IT +  +PP +   +     SP +  G +VP++    N + L   
Sbjct: 88  YYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFV-YGNSVPIAP--FNAVALGDE 147

Query: 151 Q-AGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVLVGL 190
           Q  G V L +   GRV+WKVG++  G Y L V+C   + L
Sbjct: 148 QNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINL 184

[Close]

BLAST of Lcy08g006710 vs. TAIR 10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 96.3 bits (238), Expect = 3.1e-20
Identity = 72/206 (34.95%), Postives = 105/206 (50.97%), Query Frame = 0


Query: 15  EQHN----QKHRFIGECISIFFLTLSVA-ALTLFLVY---RPTNPQFTVAGVDIHDLNMS 74
           +QHN    ++ R +   I+   L L VA A  +FLV+    P  P+F +  V I+D N+S
Sbjct: 7   DQHNGYEERRMRMMMRRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTINDFNVS 66

Query: 75  SPSLLSTTMQFTIVTRNHNKQVSIYYDRLTAFVLYRNQRITPQVMLPPVFHERQSTVTMS 134
            P+ LS+ +Q T+ +RN N ++ I+YDRL  +V YRNQ +T   +LP  +         S
Sbjct: 67  QPNFLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQGHLEVTVWS 126

Query: 135 PMLGGGRAVPVSSEVVNGLVLATSQAGAVWLRVVLLGRVKWKVGSIKIGYYALGVKCDVL 194
           P L G  AVPV+  + + L      AG V L + + G V+WKVGS   G Y L V C   
Sbjct: 127 PFLIGS-AVPVAPYLSSAL-NEDLFAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVNCPAF 186

Query: 195 VGLKRGFLGPVPLLG---SPTCKVDI 210
           + +     G  P +       C VD+
Sbjct: 187 ITVTGKLTGTGPAIKYQLVQRCAVDV 210

The following BLAST results are available for this feature:

BLAST of Lcy08g006710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ54	1.8e-20	33.75	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9SRN0	2.4e-17	30.94	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9FI03	2.4e-17	29.12	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9ZVD2	8.4e-10	26.71	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]
Q9SJ52	4.6e-08	27.27	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of Lcy08g006710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWG5	2.8e-64	66.67	NDR1/HIN1-like protein 12 OS=Momordica charantia OX=3673 GN=LOC111015429 PE=4 SV...	[more]
A0A5N6QME8	2.0e-59	66.67	LEA_2 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003731 P...	[more]
A0A0A0L882	5.9e-59	66.49	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116630 PE=4 ...	[more]
A0A540MGF2	7.8e-59	62.96	LEA_2 domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_016930 PE=4 ...	[more]
A0A5D3DAX9	1.3e-58	59.82	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Lcy08g006710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146145.1	5.7e-64	66.67	NDR1/HIN1-like protein 12 [Momordica charantia]	[more]
KAE7999283.1	4.2e-59	66.67	hypothetical protein FH972_003731 [Carpinus fangiana]	[more]
XP_038899063.1	7.2e-59	59.73	NDR1/HIN1-like protein 12 [Benincasa hispida]	[more]
XP_009366593.1	9.4e-59	59.62	PREDICTED: NDR1/HIN1-like protein 12 [Pyrus x bretschneideri]	[more]
KAF3439782.1	1.2e-58	67.03	hypothetical protein FNV43_RR18060 [Rhamnella rubrinervis]	[more]

BLAST of Lcy08g006710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01410.1	1.0e-39	45.21	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G09590.1	1.5e-22	35.88	NDR1/HIN1-like 22	[more]
AT2G35970.1	4.4e-22	35.88	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35960.1	1.3e-21	33.75	NDR1/HIN1-like 12	[more]
AT5G22200.1	3.1e-20	34.95	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 82..171 e-value: 8.2E-6 score: 26.3
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 22..208
None	No IPR available	PANTHER	PTHR31415:SF62	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 22..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g006710.1	Lcy08g006710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma