Lcy08g006290 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g006290
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Rab family
Location	Chr08: 7994348 .. 7997703 (+)
RNA-Seq Expression	Lcy08g006290
Synteny	Lcy08g006290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCACCACAACATACCTTTCGTCCCTTTCCGATGTGGGATTGCTTGGTTGCACGCTAGCAACTTTCTTCACTTGGAAGCGAGTCAAAATTAGTTAACCATCGTGAAACTTCAATTCGACACAGAAAATCTAGAAATTCTAAATATGTTATAAATCAAAAGGTTGAAACACACAGTCACACACTTTCTTGTTTGTTCTTGAGATACAGTACAAAATTCAAATTCACTGTTCTATGCCCATGACCCTTTACTTTTCCATAGCTCTCGAACAAAGACCTCCACTAAAACGAAGTGAATAGTATAGTTTTGTGTTATATATATATATATACTTTTTGCTACTTTCCTTGTTGGGAATTCTGATTTTTCTTCGAAGAACGAAGGGGGAAGTCTGGAGGAAGAATATCATGGCGGGTTATAAAGGGCATGATGAATATGATTACCTGTTTAAGCTGGTTTTGATCGGTGATTCTGGGGTTGGCAAATCAAACTTGCTATCGAGGTTTACGAGGAACCAATTTAATTTGGAATCGAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGACACTGCTGGACAAGAAAGGTTTGGTTCTTCGTTAATTGATTTTAGTTTTAAGTCAACTAAATTTTTGGTATTATTTGAAATTCCGATTGCAGTTGCATGATTTCGTTGTTTCTAATCAATCGCTTCTCTGTCAGAATATTTATCTGTTGTATCGATTGAACATGAATTATATGTCAATATATCTTTAGAGTTGCTTGAAATTTGTTGGAATGATTGTTTTTGGACAGCTTTTTACCTTTAATTTGTGATTCAGGAAACGGCGAGGGTTGAATTATTTGCTCCCCTGATTTTATTGTCGTCGTCCAGAATCTGATTTTCATGTAGAAGTTGATTTTATGAAAAGGAGAATTGATATTGAGTGAAGTTTCCTGCGTTGACGAAGTACTCTATTTTCTCCTCTACTATTTGATTGTATAAAACTTTTTTCTTTGCTTGCAGCCTGATTGTGATTACTGGAATTGGTTTGGTTTTGCTTTGATTCTTATAGAGTTAAAATGCTTTTGAACCAAGTAGCGCTGATTGAAAATTAGTCTTATAATAAGGGTGGTTTATCCTTGGAAATCTAATGGCTTCAAATGTTTAGTTTATCTTTTCAACGGAGCTTCTAATGGCCGTTGAAAAATGAACTTTCCATTGGGAATGATTGTGTTTCTGGGTTTTCTTAGCACTGTTCCTAGATGTTTGGCTTGCCCATTGGAAAAACTTGTGGTAATAAATCTGCATCCTTCCATGGAAATTTAGGAGCCTTGAGGAATTATTCTATTTCCTTCTAGGTTGGTATTCAAAAGTCATAACCGTCCCAATCGAATGAAGGTGCTGTAGACTACTTTTCTATTCTCCCTGCAAAAAATCCTCATCAGTTCAACATCCATACTTCCTTCCTTAAGTTACACAGTTTATTTGTGTGCTTCGCTGGAGTTATAGATAGCACTGGGTTTAAATACATTCATTGGTTTAGTGTAATCTTGAAGTTTAACTCTGCTGGAGCTTAACTTTGACTGGAAACAGAGACCATATGTTGAAATATATGCAGAAGTTGCCATCCAATAGTTATGATATCTGTGCGAAGGTTCCGTAGGCACCGTAAAAGTATGGAGCACAAGTAATCGTGTGAAGTATTTGTCATATGCTTGATATATCAAATAAATCAAGGAAGGTTCTTATTAGGCAAATGTGCTGAAGCTGGCACCTAATGATTAGTTATTACATTAGTATGAGCTGTAAGAGTATTAAGCACAAGTCAGGTATTTTCGACTTGCCTGATATACCTATAAATCATAGGATATGCGTTGCTGTGCTCACCTTACCTTGCTTAGTCATTTGCTGTTTTCTTTTTACATCAAACTTTCCTAATTGGGGTTTGAAACTCTTTTTGTTCATTAGGTTTTTTAAATTTTTTTTTACTTTCTTTTTTTTGGGATAAGATTGTTTTTGCAATAGTTAGGCACAGAGGAAGAATCATAACTATTCCTGATTTCCTACTGTTCAAAGACATTAATCCAAATCCATTGGGTTGGTGGGGGGTGGGGGGCGGGTTTTGTTTAGAAAAACACATATGCTTATGGATGTTGTCGCCCATTTTGTTGTATGCATTTGAATAGAAATATAGAATTGTTCTCAATTTGCTTACCATCACAGAAGGATTAAACAACTTCAACTTGTAATTTCCATCATAATTTTAGTCGTTCAACCAGCCAAAGCTTGGGTCCACTTGACTGAGCCTTGGTTTTCTTTTTCTAACTATTTAACTCAGTAGGTGGTTTGGAAATTCTATGGGATTTTTCCTTCAACAGTTTCTTTTTTATATATATTCATCTGACTACGTTCATGATGCTAAGTTTGTAAGATTTATACTTATATTTATATAGAAGTTGTCGATGTCGGTGAGGACATTATGACATGGGCGTCCTCTCGTAGCTATTTTTCGTTTGTTTTTACAGTAATTTACTGGCAACTATTTAAAAGCACTTTTTTGCTTCCTTCAATTCAGATCAACTCCTTCTGTGTAGGTACCGAGCGATAACCAGCGCTTACTACCGAGGAGCAGTAGGTGCTTTGCTTGTGTACGATGTCACTCGACGTGCAACATTTGAGAATGCTGCAAGATGGTTAAAGGAATTGAGGGATCACACAGATCCAAACATGGTGGTGATGCTCATTGGCAACAAATGCGATTTACAGCACCTCATTCTCGTTCCAACAGAAGATGGAAAATCATTTGCCGAGAGGGAGTCTTTGTACTTCATGGAGACCTCTGCACTGGATGCAACAAACGTCGAAAGTGCTTTCACGGAGGTACTCTCGCAAATATATCGAATCGTGAGCAAGAGATCAGTCGAGGTTGGCGATAGCGGAAGTGCTTCAACCCTTCCATCGAAAGGTCAGACGATAGATGTCAAGGAGGATTCGTCAGTTCTGAAGAGGATGGGATGTTGCTCCAGCTAAGATAAGCTTGAAATATTAACTTGGAAATACAGCAAGCGATATTTGTTTTGTATATTTGTATCTCTTTCTGTAGAATAAGAGCTTGGTTGTTGTTGTTTGAAAGGCGCACTTCTTTGAAAGGGAAAATCTCTTCTTGATGTTATAGTCTCTCCATGTAACTATGGAATTTGCTCTTCTTCTTATTCGAACATTTGAAACCTGAGATTTTACCGTTGTAGTGTTTTACTCTTTAGTATCAAAGGTCCAAACCAGAGATAACTGTGTATATTTCTTTTGGTTAAATCATACAAAATACTCGTGAACTT

mRNA sequence

GCCCACCACAACATACCTTTCGTCCCTTTCCGATGTGGGATTGCTTGGTTGCACGCTAGCAACTTTCTTCACTTGGAAGCGAGTCAAAATTAGTTAACCATCGTGAAACTTCAATTCGACACAGAAAATCTAGAAATTCTAAATATGTTATAAATCAAAAGGTTGAAACACACAGTCACACACTTTCTTGTTTGTTCTTGAGATACAGTACAAAATTCAAATTCACTGTTCTATGCCCATGACCCTTTACTTTTCCATAGCTCTCGAACAAAGACCTCCACTAAAACGAAGTGAATAGTATAGTTTTGTGTTATATATATATATATACTTTTTGCTACTTTCCTTGTTGGGAATTCTGATTTTTCTTCGAAGAACGAAGGGGGAAGTCTGGAGGAAGAATATCATGGCGGGTTATAAAGGGCATGATGAATATGATTACCTGTTTAAGCTGGTTTTGATCGGTGATTCTGGGGTTGGCAAATCAAACTTGCTATCGAGGTTTACGAGGAACCAATTTAATTTGGAATCGAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGACACTGCTGGACAAGAAAGGTACCGAGCGATAACCAGCGCTTACTACCGAGGAGCAGTAGGTGCTTTGCTTGTGTACGATGTCACTCGACGTGCAACATTTGAGAATGCTGCAAGATGGTTAAAGGAATTGAGGGATCACACAGATCCAAACATGGTGGTGATGCTCATTGGCAACAAATGCGATTTACAGCACCTCATTCTCGTTCCAACAGAAGATGGAAAATCATTTGCCGAGAGGGAGTCTTTGTACTTCATGGAGACCTCTGCACTGGATGCAACAAACGTCGAAAGTGCTTTCACGGAGGTACTCTCGCAAATATATCGAATCGTGAGCAAGAGATCAGTCGAGGTTGGCGATAGCGGAAGTGCTTCAACCCTTCCATCGAAAGGTCAGACGATAGATGTCAAGGAGGATTCGTCAGTTCTGAAGAGGATGGGATGTTGCTCCAGCTAAGATAAGCTTGAAATATTAACTTGGAAATACAGCAAGCGATATTTGTTTTGTATATTTGTATCTCTTTCTGTAGAATAAGAGCTTGGTTGTTGTTGTTTGAAAGGCGCACTTCTTTGAAAGGGAAAATCTCTTCTTGATGTTATAGTCTCTCCATGTAACTATGGAATTTGCTCTTCTTCTTATTCGAACATTTGAAACCTGAGATTTTACCGTTGTAGTGTTTTACTCTTTAGTATCAAAGGTCCAAACCAGAGATAACTGTGTATATTTCTTTTGGTTAAATCATACAAAATACTCGTGAACTT

Coding sequence (CDS)

ATGGCGGGTTATAAAGGGCATGATGAATATGATTACCTGTTTAAGCTGGTTTTGATCGGTGATTCTGGGGTTGGCAAATCAAACTTGCTATCGAGGTTTACGAGGAACCAATTTAATTTGGAATCGAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGACACTGCTGGACAAGAAAGGTACCGAGCGATAACCAGCGCTTACTACCGAGGAGCAGTAGGTGCTTTGCTTGTGTACGATGTCACTCGACGTGCAACATTTGAGAATGCTGCAAGATGGTTAAAGGAATTGAGGGATCACACAGATCCAAACATGGTGGTGATGCTCATTGGCAACAAATGCGATTTACAGCACCTCATTCTCGTTCCAACAGAAGATGGAAAATCATTTGCCGAGAGGGAGTCTTTGTACTTCATGGAGACCTCTGCACTGGATGCAACAAACGTCGAAAGTGCTTTCACGGAGGTACTCTCGCAAATATATCGAATCGTGAGCAAGAGATCAGTCGAGGTTGGCGATAGCGGAAGTGCTTCAACCCTTCCATCGAAAGGTCAGACGATAGATGTCAAGGAGGATTCGTCAGTTCTGAAGAGGATGGGATGTTGCTCCAGCTAA

Protein sequence

MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMVVMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKRSVEVGDSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS

Homology

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BLAST of Lcy08g006290 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 7.7e-107
Identity = 192/218 (88.07%), Postives = 208/218 (95.41%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           M GY+  DEYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+L +D K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNK DL+HL+ VPTEDGKSFAERESLYFMETSAL+ATNVE+AFTEVL+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 RSVEVGDSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS 219
           R+VE GDSGS+S LPSKGQTI+VKEDSSVLKR GCCS+
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218

[Close]

BLAST of Lcy08g006290 vs. ExPASy Swiss-Prot
Match: Q40195 (Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.1e-100
Identity = 184/218 (84.40%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYK  DEYDYLFKLVLIGDSGVGKSNLLSRFTRN+FNLESKSTIGVEFATKSL IDGK
Sbjct: 1   MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFE A RWLKELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNK DL+HL+ V TEDGK+FAE+ESLYFMETSAL+ATNVE+AF+EVL+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180

Query: 181 RSVEVGDSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS 219
           R+VE GD  S S +PS+GQTI+V EDSSVL R  CCS+
Sbjct: 181 RAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218

[Close]

BLAST of Lcy08g006290 vs. ExPASy Swiss-Prot
Match: P28185 (Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 5.9e-99
Identity = 177/218 (81.19%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  +EYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+ +++GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTR ATFENAARWL+ELR HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDL+HL+ V TE+ K+FAERESLYFMETSALDATNVE+AFTEVL+QI++IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 RSVEVGDSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSV+ G  G ++ LP KG+TI+VKED SVLKRMGCCS+
Sbjct: 181 RSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of Lcy08g006290 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.7e-96
Identity = 171/218 (78.44%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  DEYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATKSL ID K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  T+EN  RWLKELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNK DL+HL+ V T++ K  AERE LYFMETSAL+ATNVE+AFTE L+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 RSVEVGDSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS 219
           ++VE GD G+ S+ P KG+TI++K++ S  K+ GCCSS
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218

[Close]

BLAST of Lcy08g006290 vs. ExPASy Swiss-Prot
Match: Q39222 (Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 2.6e-94
Identity = 169/218 (77.52%), Postives = 197/218 (90.37%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFAT++L++DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFEN  RWLKEL++HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VML+GNK DL+HL+ VPTEDGKS+AE+ESL FMETSAL+ATNVE AF EVL+QIYRI SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 RSVEVGDSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS 219
           + VE G+ G+AS    KG+ I+VK D S LK++GCCS+
Sbjct: 181 KQVEAGEDGNASV--PKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Lcy08g006290 vs. ExPASy TrEMBL
Match: A0A5A7SMX1 (Ras-related protein Rab11D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003220 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 212/219 (96.80%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDL+HLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSAS-TLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSVE GD GSAS TLPSKGQTIDVK+DSSVLKR+GCCSS
Sbjct: 181 RSVEAGDIGSASMTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of Lcy08g006290 vs. ExPASy TrEMBL
Match: A0A0A0K737 (Small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G049180 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 212/219 (96.80%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDL+HLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSAS-TLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSVE GD GSAS TLPSKGQTIDVK+DSSVLKR+GCCSS
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of Lcy08g006290 vs. ExPASy TrEMBL
Match: A0A1S3C059 (ras-related protein Rab11D OS=Cucumis melo OX=3656 GN=LOC103495492 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.4e-111
Identity = 209/219 (95.43%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELR+HTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRNHTDPNMV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDL+HL+LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLVLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSAS-TLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSVE GD GSAS TLP KGQTIDVK+DSSVLKR+GCCSS
Sbjct: 181 RSVEAGDIGSASMTLPPKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of Lcy08g006290 vs. ExPASy TrEMBL
Match: A0A6J1D3Q3 (ras-related protein Rab11D OS=Momordica charantia OX=3673 GN=LOC111016716 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.1e-111
Identity = 207/218 (94.95%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKG DEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNK DLQHLILVPTEDGKSFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSVE GDSG+ ST+P KGQTIDVK+DSSVLKR+GCCS+
Sbjct: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 218

[Close]

BLAST of Lcy08g006290 vs. ExPASy TrEMBL
Match: A0A6J1GMB1 (ras-related protein Rab11D-like OS=Cucurbita moschata OX=3662 GN=LOC111455574 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 6.9e-111
Identity = 206/219 (94.06%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR+TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDL+HLILVPTEDG+SFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGQSFAERESLYFMETSALDATNVETAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSAS-TLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSVE  DSGSAS TLP+KGQTIDVK+DSS+L+R+GCCSS
Sbjct: 181 RSVEASDSGSASVTLPTKGQTIDVKDDSSILRRIGCCSS 219

[Close]

BLAST of Lcy08g006290 vs. NCBI nr
Match: XP_004136835.1 (ras-related protein Rab11D [Cucumis sativus] >KGN43636.1 hypothetical protein Csa_017337 [Cucumis sativus])

HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112
Identity = 212/219 (96.80%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDL+HLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSAS-TLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSVE GD GSAS TLPSKGQTIDVK+DSSVLKR+GCCSS
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of Lcy08g006290 vs. NCBI nr
Match: KAA0031553.1 (ras-related protein Rab11D [Cucumis melo var. makuwa] >TYK07006.1 ras-related protein Rab11D [Cucumis melo var. makuwa])

HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112
Identity = 212/219 (96.80%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDL+HLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSAS-TLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSVE GD GSAS TLPSKGQTIDVK+DSSVLKR+GCCSS
Sbjct: 181 RSVEAGDIGSASMTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of Lcy08g006290 vs. NCBI nr
Match: XP_008455291.1 (PREDICTED: ras-related protein Rab11D [Cucumis melo])

HSP 1 Score: 411.4 bits (1056), Expect = 4.9e-111
Identity = 209/219 (95.43%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELR+HTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRNHTDPNMV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDL+HL+LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLVLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSAS-TLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSVE GD GSAS TLP KGQTIDVK+DSSVLKR+GCCSS
Sbjct: 181 RSVEAGDIGSASMTLPPKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of Lcy08g006290 vs. NCBI nr
Match: XP_022147891.1 (ras-related protein Rab11D [Momordica charantia])

HSP 1 Score: 411.0 bits (1055), Expect = 6.4e-111
Identity = 207/218 (94.95%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKG DEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGQDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNK DLQHLILVPTEDGKSFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKSDLQHLILVPTEDGKSFAERESLYFMETSALDATNVENAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSVE GDSG+ ST+P KGQTIDVK+DSSVLKR+GCCS+
Sbjct: 181 RSVEAGDSGNVSTVPPKGQTIDVKDDSSVLKRIGCCSN 218

[Close]

BLAST of Lcy08g006290 vs. NCBI nr
Match: XP_022953053.1 (ras-related protein Rab11D-like [Cucurbita moschata] >KAG6572383.1 Ras-related protein Rab11D, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011988.1 Ras-related protein Rab11D [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110
Identity = 206/219 (94.06%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR+TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDL+HLILVPTEDG+SFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGQSFAERESLYFMETSALDATNVETAFTEVLSQIYRIVSK 180

Query: 181 RSVEVGDSGSAS-TLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSVE  DSGSAS TLP+KGQTIDVK+DSS+L+R+GCCSS
Sbjct: 181 RSVEASDSGSASVTLPTKGQTIDVKDDSSILRRIGCCSS 219

[Close]

BLAST of Lcy08g006290 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 361.7 bits (927), Expect = 4.2e-100
Identity = 177/218 (81.19%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  +EYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+ +++GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTR ATFENAARWL+ELR HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDL+HL+ V TE+ K+FAERESLYFMETSALDATNVE+AFTEVL+QI++IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 RSVEVGDSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS 219
           RSV+ G  G ++ LP KG+TI+VKED SVLKRMGCCS+
Sbjct: 181 RSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of Lcy08g006290 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-95
Identity = 169/218 (77.52%), Postives = 197/218 (90.37%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFAT++L++DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFEN  RWLKEL++HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VML+GNK DL+HL+ VPTEDGKS+AE+ESL FMETSAL+ATNVE AF EVL+QIYRI SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 RSVEVGDSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS 219
           + VE G+ G+AS    KG+ I+VK D S LK++GCCS+
Sbjct: 181 KQVEAGEDGNASV--PKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of Lcy08g006290 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 331.6 bits (849), Expect = 4.6e-91
Identity = 166/219 (75.80%), Postives = 195/219 (89.04%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+SL ++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TFEN  RWL+ELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VML+GNK DL+HL+ V TED KSFAE ESLYFMETSAL++TNVE+AF+EVL+QIY +VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 RSVEVG-DSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS 219
           +++E G DSG+   +PSKG+ IDV  D S +K+ GCCS+
Sbjct: 181 KAMEAGEDSGN---VPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of Lcy08g006290 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 330.9 bits (847), Expect = 7.9e-91
Identity = 162/218 (74.31%), Postives = 192/218 (88.07%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  DEYDYLFK+VLIGDSGVGKSNLLSRFT+N+F+LESKSTIGVEFAT+SL +D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TFEN   WLKELR+HTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VML+GNK DL+HL+ V TED KSFAE+ESLYFMETSAL+ATNVE+AF EVL+QI+ IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 RSVEVGDSGSASTLPSKGQTIDVKEDSSVLKRMGCCSS 219
           +++E   +  ++ +PSKG  ID+ +D S +K+ GCCS+
Sbjct: 181 KAMEA--ASESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of Lcy08g006290 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 324.7 bits (831), Expect = 5.7e-89
Identity = 160/220 (72.73%), Postives = 193/220 (87.73%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MA Y+  DEYDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+S+ +D K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNMV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN  RWLKELRDHTD N+V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 VMLIGNKCDLQHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           +M +GNK DL+HL  V TED K+FAERE+ +FMETSAL++ NVE+AFTEVLSQIYR+VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 RSVEVGDSGSASTLPSKGQTIDV--KEDSSVLKRMGCCSS 219
           +++++GD  +A  LP KGQTI+V  K+D S +K++GCCS+
Sbjct: 181 KALDIGDDPAA--LP-KGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of Lcy08g006290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40194	7.7e-107	88.07	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q40195	1.1e-100	84.40	Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1	[more]
P28185	5.9e-99	81.19	Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1	[more]
Q01111	4.7e-96	78.44	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
Q39222	2.6e-94	77.52	Ras-related protein RABA1b OS=Arabidopsis thaliana OX=3702 GN=RABA1B PE=1 SV=1	[more]

BLAST of Lcy08g006290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMX1	1.3e-112	96.80	Ras-related protein Rab11D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A0A0K737	1.3e-112	96.80	Small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G049180 PE=4 SV=1	[more]
A0A1S3C059	2.4e-111	95.43	ras-related protein Rab11D OS=Cucumis melo OX=3656 GN=LOC103495492 PE=4 SV=1	[more]
A0A6J1D3Q3	3.1e-111	94.95	ras-related protein Rab11D OS=Momordica charantia OX=3673 GN=LOC111016716 PE=4 S...	[more]
A0A6J1GMB1	6.9e-111	94.06	ras-related protein Rab11D-like OS=Cucurbita moschata OX=3662 GN=LOC111455574 PE...	[more]

BLAST of Lcy08g006290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136835.1	2.6e-112	96.80	ras-related protein Rab11D [Cucumis sativus] >KGN43636.1 hypothetical protein Cs...	[more]
KAA0031553.1	2.6e-112	96.80	ras-related protein Rab11D [Cucumis melo var. makuwa] >TYK07006.1 ras-related pr...	[more]
XP_008455291.1	4.9e-111	95.43	PREDICTED: ras-related protein Rab11D [Cucumis melo]	[more]
XP_022147891.1	6.4e-111	94.95	ras-related protein Rab11D [Momordica charantia]	[more]
XP_022953053.1	1.4e-110	94.06	ras-related protein Rab11D-like [Cucurbita moschata] >KAG6572383.1 Ras-related p...	[more]

BLAST of Lcy08g006290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06400.1	4.2e-100	81.19	Ras-related small GTP-binding family protein	[more]
AT1G16920.1	1.8e-95	77.52	RAB GTPase homolog A1B	[more]
AT4G18800.1	4.6e-91	75.80	RAB GTPase homolog A1D	[more]
AT5G45750.1	7.9e-91	74.31	RAB GTPase homolog A1C	[more]
AT5G60860.1	5.7e-89	72.73	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 152..174 score: 41.19 coord: 37..53 score: 35.85 coord: 117..130 score: 50.41 coord: 14..35 score: 56.68 coord: 55..77 score: 55.43
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 4.0E-27 score: 106.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 2.8E-110 score: 382.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..213 e-value: 1.6E-4 score: 15.3
None	No IPR available	PANTHER	PTHR47979:SF27	RAS-RELATED PROTEIN RIC2	coord: 1..218
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..218
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..178 score: 9.680237
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..216 score: 35.747723
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 4.218E-127 score: 353.788
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 1.2E-11 score: 29.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 3.6E-61 score: 205.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 8..210 score: 16.492275
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..216 e-value: 2.2E-70 score: 238.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..182
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 1.7E-38 score: 129.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g006290.1	Lcy08g006290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding