Lcy08g005820 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g005820
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Epidermal patterning factor-like protein
Location	Chr08: 7287094 .. 7288235 (-)
RNA-Seq Expression	Lcy08g005820
Synteny	Lcy08g005820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTATCTCTCTTTCTTTTACTTGCCCTCTTAAAAAGGAGCCTCTTTTCTTGAGGTTTGGCTCTAAAACCATGAAGGGTTTGGCTTGGTTTTCTCTTATCTTCATTGCTTTCTTATTATTTCCAACACCCATTTCGTCCAGACGCATTTCTCAGCTAAACTCACGTAATTTACATACTTTTCTTGTTTCTTTCTTTCGTGCAAAATTAGAATTGGAGCTAGAAACTTTTTAAGGAAATTTTACTTTCTAACTTTTCATGAAAGTAAATTAGAGAGAGTTTTAAGAGAGGTATGTAGAGTTTGAGTTCTACATCCAAAGTCTCAAGGGTTTAGAAAGTCTGAGTTTAGGTATGTAGGAAAATGTAGATGCAAAAGAGTAGGTTTAGAGAGCTCGAGTTTAAGAAAACTACTCCGGAGGGGTAGATGCAAAGAGAGTAGATTTAGGACACTAATGAAACCAGACAAACTCACCATGTGAACATGAATTTGGTATTATTAGATAAATATCGAGTTTCATCTCAAAACCAATTGACAACAAGAGAAATAATCCAGATATCTTATAAATATTGTGAGAGGGTCTCCTCACTTTTTCAATGTGATCCTCAACAATGAATTCAAATCCTCGCTCCAGCTCACTAATGTTGTTTGTGACTCATGTGCAGGTCGTGGGCACCACCACAAGGTGGCAACGGTCTCGGCACCGGCGAAACAGAAGTTTTACTGGTCGGAAAGGAAGGCGGCGGCAACGACGACGGGGAGAAGAGGTGCAGACACAGTTGAAGTAGCTGGGTCGAGCTTGCCGGATTGTTCACATGCCTGTGGCTCGTGCTCGCCGTGCAGACTCGTGATGATAAGCTTTGTGTGCGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTACAGATGCATGTGCAATAACAAGTCTTATCCTGTTCCTTGATCCAAACCTCTTCTCTCTTCAACACACTGTAAAAATATATTCACTCTAGCATTAGCCCATGTCTTGTTTCTGTTTATTATTCTCATATTTTCTTAGGGTTTTCGAGTTCTTTTTTCTTTTTTCTCTGCGAGTTAGAGTTGTAATCAGAGAGCTTCTAGCAACATTTTGATTAACTTTAGACAGTGCATGTGAATTCTAAT

mRNA sequence

GTTTATCTCTCTTTCTTTTACTTGCCCTCTTAAAAAGGAGCCTCTTTTCTTGAGGTTTGGCTCTAAAACCATGAAGGGTTTGGCTTGGTTTTCTCTTATCTTCATTGCTTTCTTATTATTTCCAACACCCATTTCGTCCAGACGCATTTCTCAGCTAAACTCACGTCGTGGGCACCACCACAAGGTGGCAACGGTCTCGGCACCGGCGAAACAGAAGTTTTACTGGTCGGAAAGGAAGGCGGCGGCAACGACGACGGGGAGAAGAGGTGCAGACACAGTTGAAGTAGCTGGGTCGAGCTTGCCGGATTGTTCACATGCCTGTGGCTCGTGCTCGCCGTGCAGACTCGTGATGATAAGCTTTGTGTGCGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTACAGATGCATGTGCAATAACAAGTCTTATCCTGTTCCTTGATCCAAACCTCTTCTCTCTTCAACACACTGTAAAAATATATTCACTCTAGCATTAGCCCATGTCTTGTTTCTGTTTATTATTCTCATATTTTCTTAGGGTTTTCGAGTTCTTTTTTCTTTTTTCTCTGCGAGTTAGAGTTGTAATCAGAGAGCTTCTAGCAACATTTTGATTAACTTTAGACAGTGCATGTGAATTCTAAT

Coding sequence (CDS)

ATGAAGGGTTTGGCTTGGTTTTCTCTTATCTTCATTGCTTTCTTATTATTTCCAACACCCATTTCGTCCAGACGCATTTCTCAGCTAAACTCACGTCGTGGGCACCACCACAAGGTGGCAACGGTCTCGGCACCGGCGAAACAGAAGTTTTACTGGTCGGAAAGGAAGGCGGCGGCAACGACGACGGGGAGAAGAGGTGCAGACACAGTTGAAGTAGCTGGGTCGAGCTTGCCGGATTGTTCACATGCCTGTGGCTCGTGCTCGCCGTGCAGACTCGTGATGATAAGCTTTGTGTGCGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTACAGATGCATGTGCAATAACAAGTCTTATCCTGTTCCTTGA

Protein sequence

MKGLAWFSLIFIAFLLFPTPISSRRISQLNSRRGHHHKVATVSAPAKQKFYWSERKAAATTTGRRGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

Homology

[Close]

BLAST of Lcy08g005820 vs. ExPASy Swiss-Prot
Match: Q8S8I4 (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26
Identity = 66/119 (55.46%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 8   SLIFIAFLL--FPTPISSRRISQLNSRRGHHHKVATVSAPAKQKFYWSERKAAATTTGRR 67
           SL+ +AF L  F   + +R +    S    HH V    A  +Q               RR
Sbjct: 3   SLLLLAFFLSFFFGSLLARHLP--TSSHPSHHHVGMTGALKRQ---------------RR 62

Query: 68  GADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
             DTV+VAGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMAY+CMCNNKSYPVP
Sbjct: 63  RPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPVP 104

[Close]

BLAST of Lcy08g005820 vs. ExPASy Swiss-Prot
Match: Q8LC53 (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.8e-11
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 74  GSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
           GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Sbjct: 70  GSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTCRGRYYHVP 117

[Close]

BLAST of Lcy08g005820 vs. ExPASy Swiss-Prot
Match: C4B8C5 (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EPFL7 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.8e-11
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 71  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
           + +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 119 KASGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of Lcy08g005820 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.3e-04
Identity = 22/48 (45.83%), Postives = 27/48 (56.25%), Query Frame = 0


Query: 74  GSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSY 122
           GSS P CS  CG C+PC+ V +     +   AE  P A+RC C NK Y
Sbjct: 107 GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 154

[Close]

BLAST of Lcy08g005820 vs. ExPASy TrEMBL
Match: A0A6J1ESJ9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437184 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.4e-47
Identity = 103/129 (79.84%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 1   MKGLAWFSLIFIAFLLFPTPISSRRISQLNSRRGHHHKVATVSA----PAKQKFYWSERK 60
           MKGL  FSLIFIAFLLFP PISSRRISQLNSRRGHHHK A  S      AK K YW   K
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKGKSYWPVTK 60

Query: 61  A-AATTTGRRGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCM 120
           A AA   GR+G +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCM
Sbjct: 61  AVAAAVMGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCM 120

Query: 121 CNNKSYPVP 125
           CNNKSYPVP
Sbjct: 121 CNNKSYPVP 129

[Close]

BLAST of Lcy08g005820 vs. ExPASy TrEMBL
Match: A0A6J1JEL1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486204 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44
Identity = 98/128 (76.56%), Postives = 101/128 (78.91%), Query Frame = 0


Query: 1   MKGLAWFSLIFIAFLLFPTPISSRRISQLNSRRGHHHKVATVSA----PAKQKFYWSERK 60
           MKGL  FSLIFIAFLLFP PISSRRISQLNSRRGHHHK A  S      AKQ  YW    
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKQNSYW---- 60

Query: 61  AAATTTGRRGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMC 120
                  R+G +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCMC
Sbjct: 61  ---PALWRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCMC 120

Query: 121 NNKSYPVP 125
           NNKSYPVP
Sbjct: 121 NNKSYPVP 121

[Close]

BLAST of Lcy08g005820 vs. ExPASy TrEMBL
Match: A0A0A0K5P8 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047370 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.0e-42
Identity = 92/124 (74.19%), Postives = 98/124 (79.03%), Query Frame = 0


Query: 1   MKGLAWFSLIFIAFLLFPTPISSRRISQLNSRRGHHHKVATVSAPAKQKFYWSERKAAAT 60
           MK    FS++FIAFLLF TPISSRRISQ NSR GHH K A  S+         E+ A  T
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 61  TTGRRGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
             GR+G +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 125
           YPVP
Sbjct: 121 YPVP 124

[Close]

BLAST of Lcy08g005820 vs. ExPASy TrEMBL
Match: A0A1S3C0N9 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40
Identity = 91/124 (73.39%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 1   MKGLAWFSLIFIAFLLFPTPISSRRISQLNSRRGHHHKVATVSAPAKQKFYWSERKAAAT 60
           MK    FS+IFI FLL  TPISSRRISQ NSR GHH K A  S  A         K    
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVV--NEKVTMM 60

Query: 61  TTGRRGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
           T GR+G +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  TMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 125
           YPVP
Sbjct: 121 YPVP 122

[Close]

BLAST of Lcy08g005820 vs. ExPASy TrEMBL
Match: A0A6J1GMI9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455631 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.4e-36
Identity = 82/124 (66.13%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 1   MKGLAWFSLIFIAFLLFPTPISSRRISQLNSRRGHHHKVATVSAPAKQKFYWSERKAAAT 60
           MKG  WFS+IFIAFLLFPTPISS+RIS  NS+                            
Sbjct: 1   MKGSTWFSIIFIAFLLFPTPISSQRISHQNSQE--------------------------A 60

Query: 61  TTGRRGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
             GR+G +TVEVAGSSLPDCSHAC SCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  AMGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 98

Query: 121 YPVP 125
           YP+P
Sbjct: 121 YPLP 98

[Close]

BLAST of Lcy08g005820 vs. NCBI nr
Match: XP_022930814.1 (uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 uncharacterized protein LOC111793854 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.0 bits (502), Expect = 4.9e-47
Identity = 103/129 (79.84%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 1   MKGLAWFSLIFIAFLLFPTPISSRRISQLNSRRGHHHKVATVSA----PAKQKFYWSERK 60
           MKGL  FSLIFIAFLLFP PISSRRISQLNSRRGHHHK A  S      AK K YW   K
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKGKSYWPVTK 60

Query: 61  A-AATTTGRRGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCM 120
           A AA   GR+G +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCM
Sbjct: 61  AVAAAVMGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCM 120

Query: 121 CNNKSYPVP 125
           CNNKSYPVP
Sbjct: 121 CNNKSYPVP 129

[Close]

BLAST of Lcy08g005820 vs. NCBI nr
Match: XP_038888568.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida])

HSP 1 Score: 189.5 bits (480), Expect = 1.7e-44
Identity = 94/124 (75.81%), Postives = 102/124 (82.26%), Query Frame = 0


Query: 1   MKGLAWFSLIFIAFLLFPTPISSRRISQLNSRRGHHHKVATVSAPAKQKFYWSERKAAAT 60
           M    WFS++FIAF LFPTPISSR ISQ NS  GHH K+AT +   K+K Y  E+KA   
Sbjct: 1   MNPSTWFSILFIAFFLFPTPISSRHISQRNSHHGHHRKMATTT--VKEKLYSPEKKA--- 60

Query: 61  TTGRRGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
             GR+GADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  VIGRKGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 119

Query: 121 YPVP 125
           YP+P
Sbjct: 121 YPIP 119

[Close]

BLAST of Lcy08g005820 vs. NCBI nr
Match: XP_022989012.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucurbita maxima])

HSP 1 Score: 188.7 bits (478), Expect = 3.0e-44
Identity = 98/128 (76.56%), Postives = 101/128 (78.91%), Query Frame = 0


Query: 1   MKGLAWFSLIFIAFLLFPTPISSRRISQLNSRRGHHHKVATVSA----PAKQKFYWSERK 60
           MKGL  FSLIFIAFLLFP PISSRRISQLNSRRGHHHK A  S      AKQ  YW    
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKQNSYW---- 60

Query: 61  AAATTTGRRGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMC 120
                  R+G +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCMC
Sbjct: 61  ---PALWRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCMC 120

Query: 121 NNKSYPVP 125
           NNKSYPVP
Sbjct: 121 NNKSYPVP 121

[Close]

BLAST of Lcy08g005820 vs. NCBI nr
Match: XP_004136818.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical protein Csa_020445 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 2.1e-42
Identity = 92/124 (74.19%), Postives = 98/124 (79.03%), Query Frame = 0


Query: 1   MKGLAWFSLIFIAFLLFPTPISSRRISQLNSRRGHHHKVATVSAPAKQKFYWSERKAAAT 60
           MK    FS++FIAFLLF TPISSRRISQ NSR GHH K A  S+         E+ A  T
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 61  TTGRRGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
             GR+G +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 125
           YPVP
Sbjct: 121 YPVP 124

[Close]

BLAST of Lcy08g005820 vs. NCBI nr
Match: XP_008455333.1 (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo])

HSP 1 Score: 175.3 bits (443), Expect = 3.4e-40
Identity = 91/124 (73.39%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 1   MKGLAWFSLIFIAFLLFPTPISSRRISQLNSRRGHHHKVATVSAPAKQKFYWSERKAAAT 60
           MK    FS+IFI FLL  TPISSRRISQ NSR GHH K A  S  A         K    
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVV--NEKVTMM 60

Query: 61  TTGRRGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
           T GR+G +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  TMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 125
           YPVP
Sbjct: 121 YPVP 122

[Close]

BLAST of Lcy08g005820 vs. TAIR 10
Match: AT2G20875.1 (epidermal patterning factor 1 )

HSP 1 Score: 120.6 bits (301), Expect = 9.2e-28
Identity = 66/119 (55.46%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 8   SLIFIAFLL--FPTPISSRRISQLNSRRGHHHKVATVSAPAKQKFYWSERKAAATTTGRR 67
           SL+ +AF L  F   + +R +    S    HH V    A  +Q               RR
Sbjct: 3   SLLLLAFFLSFFFGSLLARHLP--TSSHPSHHHVGMTGALKRQ---------------RR 62

Query: 68  GADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
             DTV+VAGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMAY+CMCNNKSYPVP
Sbjct: 63  RPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPVP 104

[Close]

BLAST of Lcy08g005820 vs. TAIR 10
Match: AT1G34245.1 (Putative membrane lipoprotein )

HSP 1 Score: 68.6 bits (166), Expect = 4.2e-12
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 74  GSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
           GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Sbjct: 70  GSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTCRGRYYHVP 117

[Close]

BLAST of Lcy08g005820 vs. TAIR 10
Match: AT1G71866.1 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Putative membrane lipoprotein (TAIR:AT1G34245.1). )

HSP 1 Score: 68.6 bits (166), Expect = 4.2e-12
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 71  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
           + +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 119 KASGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of Lcy08g005820 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 45.4 bits (106), Expect = 3.8e-05
Identity = 22/48 (45.83%), Postives = 27/48 (56.25%), Query Frame = 0


Query: 74  GSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSY 122
           GSS P CS  CG C+PC+ V +     +   AE  P A+RC C NK Y
Sbjct: 181 GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 228

[Close]

BLAST of Lcy08g005820 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 45.4 bits (106), Expect = 3.8e-05
Identity = 22/48 (45.83%), Postives = 27/48 (56.25%), Query Frame = 0


Query: 74  GSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSY 122
           GSS P CS  CG C+PC+ V +     +   AE  P A+RC C NK Y
Sbjct: 107 GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 154

The following BLAST results are available for this feature:

BLAST of Lcy08g005820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8I4	1.3e-26	55.46	Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE...	[more]
Q8LC53	5.8e-11	60.78	Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE...	[more]
C4B8C5	5.8e-11	51.85	EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	5.3e-04	45.83	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Lcy08g005820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESJ9	2.4e-47	79.84	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JEL1	1.4e-44	76.56	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A0A0K5P8	1.0e-42	74.19	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047...	[more]
A0A1S3C0N9	1.6e-40	73.39	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522...	[more]
A0A6J1GMI9	5.4e-36	66.13	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Lcy08g005820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930814.1	4.9e-47	79.84	uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 unchar...	[more]
XP_038888568.1	1.7e-44	75.81	protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida]	[more]
XP_022989012.1	3.0e-44	76.56	protein EPIDERMAL PATTERNING FACTOR 1 [Cucurbita maxima]	[more]
XP_004136818.1	2.1e-42	74.19	protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical...	[more]
XP_008455333.1	3.4e-40	73.39	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]	[more]

BLAST of Lcy08g005820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20875.1	9.2e-28	55.46	epidermal patterning factor 1	[more]
AT1G34245.1	4.2e-12	60.78	Putative membrane lipoprotein	[more]
AT1G71866.1	4.2e-12	51.85	LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Put...	[more]
AT2G30370.1	3.8e-05	45.83	allergen-related	[more]
AT2G30370.2	3.8e-05	45.83	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 73..122 e-value: 4.1E-15 score: 55.5
None	No IPR available	PANTHER	PTHR33109:SF41	PROTEIN EPIDERMAL PATTERNING FACTOR 1	coord: 8..124
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 8..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g005820.1	Lcy08g005820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region