Lcy08g005660 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g005660
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein TIC 20
Location	Chr08: 7156263 .. 7158358 (+)
RNA-Seq Expression	Lcy08g005660
Synteny	Lcy08g005660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCACTCTTCCTTCCTACGCGGAAAACGGGAAAGATGTTTGCGTTTGCTCCGGGCACTGCCCGATTCCACTGCAACTCACCGAATCCGCTCCTCCCGCCGCCGTCGACGGCGACGTCGCCGGCATCGTCCCTACGGTATGTTGTCTTCTTTGATCGTTTCTTTAATTTTCTGTTCTTTTCCATTCCGCTTCGTTGAACCGAAACTGGGGAACGTATTTACAGTTCTTGATTTTGGGCAATTTATTTCAAGATTCTTTTTTTGGATTCTTTATTGTTTATGTTCTAGGTTAACTTCTGAAAATAGAGAGTGTATTTGGCATCCGGATTTTCTTTTCTTTTTTTGTTCATTCTTGTTAATGTTTGCATTTGGAACAAATGATTGGAATATAAATCTGGGGGAAGACTATTGAAGATGATTTAGTTGTCTTTCTAGGTTAATTTTGCTAATCATTTGATTTGCTCAGTTGTTAACTGAATTACTTCAAGCATTGGGTATCTAGCATTATTGGTATTACTCTTCCTGTTGTGGCCTCTGTTGATCTCCATGTAAATTTTAATTGAGATTGCCATTCTGAGAGAAATCTGGTTCTGATTTTGTTGTCCCACTCTAATTGATCTTGTTTTAGGTACAAGGATGGGGTTCTGAAAAGATGTTTCAAGCCCAGCCGAGTGGTTATGCCCCAATGTAGTCGATTGGGTTGTGCTAATTTGAACACAAAGCTTGTGTTGCCTGTTAGCTGTGCTAAACAGGAATCATGTCAAGAATTGAAGGTTTCTTCTTCTAGAGGTATGAGAAGTTTTTACTCAAGCATTTTTCTTTTGGTCTGAACATTTGCACAAATATTGTTTACTCCTGCATTGTGCACAAATTTTGTGAAGATGGATTCTAAATGATTTTCCTTTTTGTTTGTTGTGCCTATGGGACGATTATACTCTTGATAGGGGATGATATAAGTTTACTCTGAGAAACCGGTGTTCGAACAACCCAAAATTTGTTTTTGTTTGTTGTGCCTCTGCACTAGATACTGAATTACTTTATGGAACTTTGGTGGGCTTTTGAAGAAGAGTGCATTGATGATCATATTGCTCAGTGAGGATACAGACTGCATAGTTGTCATGTCTCATGATAATTTAACCATCTTTTGCTATTTAATTCAATGCCATCATGTTTGTACTTGGAGAAGAACTAATAATGTCGATACCATACTCATTTTGAATATTATGATTTCCAGGATTTCTGATATCACACCTTTCTGCAACATCATCCCCACATCTATCTGGGGAACAAGGTAGTCTATTTGACAAACTTCCACTTTTACCTCCACGAAATTGTGTTTCAAAGAGTCCTCAAGCATTCAGAGATAACTCTTACGGTGTAAAACGCTACACGGAGGTCACCAAAAAACCAGAATGGTGGTGGAGGACTTTAGCTTGTGTTCCATATGTGATGGCTTTGCAGATGTCTAGTACAGCATATTATCTTCTGCCCTTGTTGGAACACTTGGATGTCGATAATTTAATATTTTACGTCCCTGGAGCTGTTCAGAAGTTACCGTGGTGGTTCCCAATGTTATACTTCAACCTTGCATACTTCGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCATTAGGTTCCATGTCATGATGGGGATGTTGTTAGAAACAGCGCTCGACATCATATGGTACGCGAGCAACTTCATGCCACTCATACATTACAATGGTACATTTGCAATGCAATATTGGGCAGCAGTGGGGTTCATCTACATTTCCATCTTGTTGGTGTGCGTAAGGAGTTCTCTCTTAGGCACTTATGCCAAAATACCATTCATTTTCGAAAACGCGCTTATCCATACCTTTTTCAGTATAGGCCGATATTATCGGCCGTTCTAAGGCTGCAGCAAGGTATGATATGTCAGTTAGAGTCTTAGAGGTAGAGAATCAAGTACTAGAGCAGGCTCTTTTTCTGATGTTGTTTCGGGATGTTATTGTTGAGTTAACTTGTGTTAGCAAAATTGGGGTTTAAGATCTTATAGCTCTTTTAAATGTGACTGCCAAATTTTT

mRNA sequence

CTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCACTCTTCCTTCCTACGCGGAAAACGGGAAAGATGTTTGCGTTTGCTCCGGGCACTGCCCGATTCCACTGCAACTCACCGAATCCGCTCCTCCCGCCGCCGTCGACGGCGACGTCGCCGGCATCGTCCCTACGGTACAAGGATGGGGTTCTGAAAAGATGTTTCAAGCCCAGCCGAGTGGTTATGCCCCAATGTAGTCGATTGGGTTGTGCTAATTTGAACACAAAGCTTGTGTTGCCTGTTAGCTGTGCTAAACAGGAATCATGTCAAGAATTGAAGGTTTCTTCTTCTAGAGGATTTCTGATATCACACCTTTCTGCAACATCATCCCCACATCTATCTGGGGAACAAGGTAGTCTATTTGACAAACTTCCACTTTTACCTCCACGAAATTGTGTTTCAAAGAGTCCTCAAGCATTCAGAGATAACTCTTACGGTGTAAAACGCTACACGGAGGTCACCAAAAAACCAGAATGGTGGTGGAGGACTTTAGCTTGTGTTCCATATGTGATGGCTTTGCAGATGTCTAGTACAGCATATTATCTTCTGCCCTTGTTGGAACACTTGGATGTCGATAATTTAATATTTTACGTCCCTGGAGCTGTTCAGAAGTTACCGTGGTGGTTCCCAATGTTATACTTCAACCTTGCATACTTCGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCATTAGGTTCCATGTCATGATGGGGATGTTGTTAGAAACAGCGCTCGACATCATATGGTACGCGAGCAACTTCATGCCACTCATACATTACAATGGTACATTTGCAATGCAATATTGGGCAGCAGTGGGGTTCATCTACATTTCCATCTTGTTGGTGTGCGTAAGGAGTTCTCTCTTAGGCACTTATGCCAAAATACCATTCATTTTCGAAAACGCGCTTATCCATACCTTTTTCAGTATAGGCCGATATTATCGGCCGTTCTAAGGCTGCAGCAAGGTATGATATGTCAGTTAGAGTCTTAGAGGTAGAGAATCAAGTACTAGAGCAGGCTCTTTTTCTGATGTTGTTTCGGGATGTTATTGTTGAGTTAACTTGTGTTAGCAAAATTGGGGTTTAAGATCTTATAGCTCTTTTAAATGTGACTGCCAAATTTTT

Coding sequence (CDS)

ATGTTTGCGTTTGCTCCGGGCACTGCCCGATTCCACTGCAACTCACCGAATCCGCTCCTCCCGCCGCCGTCGACGGCGACGTCGCCGGCATCGTCCCTACGGTACAAGGATGGGGTTCTGAAAAGATGTTTCAAGCCCAGCCGAGTGGTTATGCCCCAATGTAGTCGATTGGGTTGTGCTAATTTGAACACAAAGCTTGTGTTGCCTGTTAGCTGTGCTAAACAGGAATCATGTCAAGAATTGAAGGTTTCTTCTTCTAGAGGATTTCTGATATCACACCTTTCTGCAACATCATCCCCACATCTATCTGGGGAACAAGGTAGTCTATTTGACAAACTTCCACTTTTACCTCCACGAAATTGTGTTTCAAAGAGTCCTCAAGCATTCAGAGATAACTCTTACGGTGTAAAACGCTACACGGAGGTCACCAAAAAACCAGAATGGTGGTGGAGGACTTTAGCTTGTGTTCCATATGTGATGGCTTTGCAGATGTCTAGTACAGCATATTATCTTCTGCCCTTGTTGGAACACTTGGATGTCGATAATTTAATATTTTACGTCCCTGGAGCTGTTCAGAAGTTACCGTGGTGGTTCCCAATGTTATACTTCAACCTTGCATACTTCGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCATTAGGTTCCATGTCATGATGGGGATGTTGTTAGAAACAGCGCTCGACATCATATGGTACGCGAGCAACTTCATGCCACTCATACATTACAATGGTACATTTGCAATGCAATATTGGGCAGCAGTGGGGTTCATCTACATTTCCATCTTGTTGGTGTGCGTAAGGAGTTCTCTCTTAGGCACTTATGCCAAAATACCATTCATTTTCGAAAACGCGCTTATCCATACCTTTTTCAGTATAGGCCGATATTATCGGCCGTTCTAA

Protein sequence

MFAFAPGTARFHCNSPNPLLPPPSTATSPASSLRYKDGVLKRCFKPSRVVMPQCSRLGCANLNTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPRNCVSKSPQAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLEHLDVDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWYASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF

Homology

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BLAST of Lcy08g005660 vs. ExPASy Swiss-Prot
Match: Q9ZQZ9 (Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.4e-53
Identity = 109/248 (43.95%), Postives = 158/248 (63.71%), Query Frame = 0


Query: 63  NTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPRNCV 122
           + KL L  S   +   +E+   S+   +    +ATSS  L        + LP L P    
Sbjct: 42  SAKLRLSASSISRRCPREIAPLSATASVDFAAAATSSNQL------FANGLPPLAPGLRR 101

Query: 123 SKSP----QAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLE-H 182
            + P    +  +D+ + +K   ++ ++PEWWWRTLACVPY+++LQ+S   +Y+ P LE H
Sbjct: 102 HRRPIEPARVAKDDFFKIK-LPKIAERPEWWWRTLACVPYLISLQISDVGFYVQPFLEKH 161

Query: 183 LDVDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDII 242
             + ++I+++PGA+ + P WF M+Y  L Y  VV+NKELPH++RFH+MMGMLLETAL +I
Sbjct: 162 DAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFHMMMGMLLETALQVI 221

Query: 243 WYASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFF 302
           W  SNF PLIH+ G F M YW A+GF YI +LL C+R +L G YA+IPF+ + A IHT F
Sbjct: 222 WCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQIPFMTDAASIHTLF 281

Query: 303 SIGRYYRP 306
           ++G + RP
Sbjct: 282 NLGGFQRP 282

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BLAST of Lcy08g005660 vs. ExPASy Swiss-Prot
Match: Q8GZ79 (Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-47
Identity = 106/212 (50.00%), Postives = 137/212 (64.62%), Query Frame = 0


Query: 86  SRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPRNCVSKSPQAFRDNSYGVKRYTEVTKK 145
           SRG  +S+LSA+SS  L+GEQGSL   LP+LP R     +P+A +D      R+  +TKK
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 146 PEWWWRTLACVPYVMAL----QMSSTAYYLLPLLEHLDVDNLIFYVPGAVQKLPWWFPML 205
           P+WWWRTLAC+PY+M L      + TAY+L P LE  D + L +   GA+ +LP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 206 YFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWYASNFMPLIHYNGTFAMQYWAAV 265
           YF +AY G+VR KE PHF RFHV+MGMLLE AL +I   S +MPL  Y G F M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 266 GFIYISILLVCVRSSLLGTYAKIPFIFENALI 294
            F Y+  +L  +R +L G YA IPF+ + A I
Sbjct: 241 AFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

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BLAST of Lcy08g005660 vs. ExPASy Swiss-Prot
Match: Q9ZST8 (Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-36
Identity = 84/211 (39.81%), Postives = 123/211 (58.29%), Query Frame = 0


Query: 87  RGFLISHLSATSSPHLSGEQGSLFDKLPLLPPRNCVSKSPQAFRDNSYGVKRYTEVTKKP 146
           RG   + +SATSS  LSG Q  L   +P+LP  +  S +P+A +D+S    R+  +TKKP
Sbjct: 42  RGMTFTDMSATSSLLLSGGQNFLSRTIPVLPTLHKSSTTPRATKDSS--GFRFPPMTKKP 101

Query: 147 EWWWRTLACVPYVM----ALQMSSTAYYLLPLLEHLDVDNLIFYVPGAVQKLPWWFPMLY 206
            WWWRTL+C+PY++    A   + TAY+L P + +       F +  A+  LP W  + Y
Sbjct: 102 RWWWRTLSCIPYLLPFHQAWMYARTAYHLHPFIPYFQPMTYPFLM--AIGTLPRWSLIAY 161

Query: 207 FNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWYASNFMPLIHYNGTFAMQYWAAVG 266
           F +AY  +VR KE PHF RFHV +GML+E AL +    S +MP   Y G   M +W    
Sbjct: 162 FLIAYLTIVRRKEWPHFFRFHVAVGMLIEIALQVTGIVSRWMPRSFYWGKLGMHFWTTAF 221

Query: 267 FIYISILLVCVRSSLLGTYAKIPFIFENALI 294
           F+++   + C+R +L+G YA +PF+ + A I
Sbjct: 222 FVFLFTTIECIRCALVGMYADVPFVCDAAYI 248

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BLAST of Lcy08g005660 vs. ExPASy TrEMBL
Match: A0A6J1HZ71 (Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 1.1e-138
Identity = 245/307 (79.80%), Postives = 269/307 (87.62%), Query Frame = 0


Query: 1   MFAFAP-GTARFHCNSPNPLLPPPSTATSPASSLRYKDGVLKRCFKPSRVVMPQCSRLGC 60
           MFA AP  +AR  CNSPNPLL  P+T  + ASS+RY+D VLK CFKPS+VV+PQC RLGC
Sbjct: 28  MFAVAPSSSARLRCNSPNPLLSMPATMMATASSVRYRDVVLKGCFKPSQVVVPQCRRLGC 87

Query: 61  ANLNTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPR 120
           ANL   LVL +S  KQE C+ELK SSSRG +ISHLSA +SP L GEQGSLF KLPLLPPR
Sbjct: 88  ANLGPNLVLFISNTKQEPCKELKFSSSRGMVISHLSAAASPTLCGEQGSLFHKLPLLPPR 147

Query: 121 NCVSKSPQAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLEHLD 180
               KSPQAFRD+SYGVKR++ +TKKPEWWWRTLACVPY+MALQMSSTAYYLLPLLEHL+
Sbjct: 148 KYARKSPQAFRDDSYGVKRHSMITKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 VDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWY 240
           VDNLIFYVPGAVQ LPWWFPMLY NLAYFGVVRNKELPHFIRFHVMMGMLL TALDI+WY
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYVNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 ASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFFSI 300
            SNFMPLIHYNGT++MQYWAAVGFIYISIL +C+RSSL+GTYAKIPFI ENALIHTFFS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLIGTYAKIPFISENALIHTFFST 327

Query: 301 GRYYRPF 307
           GRY+RPF
Sbjct: 328 GRYFRPF 334

[Close]

BLAST of Lcy08g005660 vs. ExPASy TrEMBL
Match: A0A6J1GL44 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.4e-138
Identity = 246/307 (80.13%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 1   MFAFAPGT-ARFHCNSPNPLLPPPSTATSPASSLRYKDGVLKRCFKPSRVVMPQCSRLGC 60
           M A AP + AR  CNS NPLL  P+T  + ASS+RY+D VLK CFKPS+VV+PQC RL C
Sbjct: 28  MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 87

Query: 61  ANLNTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPR 120
           ANL T LVL +S  KQE C+ELK SSSRG LISHLSA +SP L GEQGSLF KLPLLPPR
Sbjct: 88  ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 147

Query: 121 NCVSKSPQAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLEHLD 180
               KSPQ FRD+SYGVKR++ VTKKPEWWWRTLACVPY+MALQMSSTAYYLLPLLEHL+
Sbjct: 148 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 VDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWY 240
           VDNLIFYVPGAVQ LPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLL TALDI+WY
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 ASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFFSI 300
            SNFMPLIHYNGT++MQYWAAVGFIYISIL +C+RSSLLGTYAKIPFI ENALIHTFFS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327

Query: 301 GRYYRPF 307
           GRY+RPF
Sbjct: 328 GRYFRPF 334

[Close]

BLAST of Lcy08g005660 vs. ExPASy TrEMBL
Match: A0A6J1GMA4 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.4e-138
Identity = 246/307 (80.13%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 1   MFAFAPGT-ARFHCNSPNPLLPPPSTATSPASSLRYKDGVLKRCFKPSRVVMPQCSRLGC 60
           M A AP + AR  CNS NPLL  P+T  + ASS+RY+D VLK CFKPS+VV+PQC RL C
Sbjct: 13  MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 72

Query: 61  ANLNTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPR 120
           ANL T LVL +S  KQE C+ELK SSSRG LISHLSA +SP L GEQGSLF KLPLLPPR
Sbjct: 73  ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 132

Query: 121 NCVSKSPQAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLEHLD 180
               KSPQ FRD+SYGVKR++ VTKKPEWWWRTLACVPY+MALQMSSTAYYLLPLLEHL+
Sbjct: 133 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 192

Query: 181 VDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWY 240
           VDNLIFYVPGAVQ LPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLL TALDI+WY
Sbjct: 193 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 252

Query: 241 ASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFFSI 300
            SNFMPLIHYNGT++MQYWAAVGFIYISIL +C+RSSLLGTYAKIPFI ENALIHTFFS 
Sbjct: 253 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 312

Query: 301 GRYYRPF 307
           GRY+RPF
Sbjct: 313 GRYFRPF 319

[Close]

BLAST of Lcy08g005660 vs. ExPASy TrEMBL
Match: A0A6J1HX02 (Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.9e-136
Identity = 244/307 (79.48%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 1   MFAFAP-GTARFHCNSPNPLLPPPSTATSPASSLRYKDGVLKRCFKPSRVVMPQCSRLGC 60
           MFA AP  +AR  CNSPNPLL  P+T  + ASS+R  D VLK CFKPS+VV+PQC RLGC
Sbjct: 28  MFAVAPSSSARLRCNSPNPLLSMPATMMATASSVR--DVVLKGCFKPSQVVVPQCRRLGC 87

Query: 61  ANLNTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPR 120
           ANL   LVL +S  KQE C+ELK SSSRG +ISHLSA +SP L GEQGSLF KLPLLPPR
Sbjct: 88  ANLGPNLVLFISNTKQEPCKELKFSSSRGMVISHLSAAASPTLCGEQGSLFHKLPLLPPR 147

Query: 121 NCVSKSPQAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLEHLD 180
               KSPQAFRD+SYGVKR++ +TKKPEWWWRTLACVPY+MALQMSSTAYYLLPLLEHL+
Sbjct: 148 KYARKSPQAFRDDSYGVKRHSMITKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 VDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWY 240
           VDNLIFYVPGAVQ LPWWFPMLY NLAYFGVVRNKELPHFIRFHVMMGMLL TALDI+WY
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYVNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 ASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFFSI 300
            SNFMPLIHYNGT++MQYWAAVGFIYISIL +C+RSSL+GTYAKIPFI ENALIHTFFS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLIGTYAKIPFISENALIHTFFST 327

Query: 301 GRYYRPF 307
           GRY+RPF
Sbjct: 328 GRYFRPF 332

[Close]

BLAST of Lcy08g005660 vs. ExPASy TrEMBL
Match: A0A6J1GM78 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 5.1e-136
Identity = 245/307 (79.80%), Postives = 265/307 (86.32%), Query Frame = 0


Query: 1   MFAFAPGT-ARFHCNSPNPLLPPPSTATSPASSLRYKDGVLKRCFKPSRVVMPQCSRLGC 60
           M A AP + AR  CNS NPLL  P+T  + ASS+R  D VLK CFKPS+VV+PQC RL C
Sbjct: 28  MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVR--DVVLKGCFKPSQVVVPQCRRLDC 87

Query: 61  ANLNTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPR 120
           ANL T LVL +S  KQE C+ELK SSSRG LISHLSA +SP L GEQGSLF KLPLLPPR
Sbjct: 88  ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 147

Query: 121 NCVSKSPQAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLEHLD 180
               KSPQ FRD+SYGVKR++ VTKKPEWWWRTLACVPY+MALQMSSTAYYLLPLLEHL+
Sbjct: 148 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 VDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWY 240
           VDNLIFYVPGAVQ LPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLL TALDI+WY
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 ASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFFSI 300
            SNFMPLIHYNGT++MQYWAAVGFIYISIL +C+RSSLLGTYAKIPFI ENALIHTFFS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327

Query: 301 GRYYRPF 307
           GRY+RPF
Sbjct: 328 GRYFRPF 332

[Close]

BLAST of Lcy08g005660 vs. NCBI nr
Match: XP_038888476.1 (protein TIC 20-IV, chloroplastic [Benincasa hispida])

HSP 1 Score: 533.5 bits (1373), Expect = 1.2e-147
Identity = 254/306 (83.01%), Postives = 277/306 (90.52%), Query Frame = 0


Query: 1   MFAFAPGTARFHCNSPNPLLPPPSTATSPASSLRYKDGVLKRCFKPSRVVMPQCSRLGCA 60
           MFA  P  AR HCNSPNPLLPPP+TAT+  +S+RYKD  LKRCFKPS+VV+PQC R G +
Sbjct: 28  MFAVGPSNARLHCNSPNPLLPPPATATATGASVRYKDVFLKRCFKPSQVVIPQCHRFGSS 87

Query: 61  NLNTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPRN 120
           NL+TKLVL ++  KQE  +ELK SSS+G LIS LSA +SPHLSGEQGSLF KLPLLPPRN
Sbjct: 88  NLDTKLVLSITNTKQEPYKELKCSSSKGILISQLSAAASPHLSGEQGSLFHKLPLLPPRN 147

Query: 121 CVSKSPQAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLEHLDV 180
           C  KSPQAFRD+SY VKR++ VT+KPEWWWRTLACVPY+MALQMSSTAYYLLPLLEHLDV
Sbjct: 148 CAGKSPQAFRDDSYSVKRHSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDV 207

Query: 181 DNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWYA 240
           DNLIFY+PG VQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLET LDI+WY+
Sbjct: 208 DNLIFYIPGFVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETLLDIVWYS 267

Query: 241 SNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFFSIG 300
           SNFMPLIHYNGT+AMQYWAAVGFIYIS LLVC+RSSLLGTYAKIPFIFENALIHTFFSIG
Sbjct: 268 SNFMPLIHYNGTYAMQYWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFSIG 327

Query: 301 RYYRPF 307
           RYYRPF
Sbjct: 328 RYYRPF 333

[Close]

BLAST of Lcy08g005660 vs. NCBI nr
Match: XP_023554543.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508.1 bits (1307), Expect = 5.4e-140
Identity = 248/307 (80.78%), Postives = 270/307 (87.95%), Query Frame = 0


Query: 1   MFAFAPGT-ARFHCNSPNPLLPPPSTATSPASSLRYKDGVLKRCFKPSRVVMPQCSRLGC 60
           MFA AP + AR  CNSPNPLL  P+T  + ASS+RY+D VLK CFKPS+VV+PQC RL C
Sbjct: 28  MFAVAPSSGARLRCNSPNPLLAMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 87

Query: 61  ANLNTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPR 120
           ANL T LVL +S  KQE C+ELK SSSRG L+SHLSA +SP L GEQGSLF KLPLLPPR
Sbjct: 88  ANLGTNLVLSISNTKQEPCKELKFSSSRGMLMSHLSAAASPTLGGEQGSLFHKLPLLPPR 147

Query: 121 NCVSKSPQAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLEHLD 180
               KSPQAFRD+SYGVKR++ VTKKPEWWWRTLACVPY+MALQMSSTAYYLLPLLEHL+
Sbjct: 148 KYARKSPQAFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 VDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWY 240
           VDNLIFYVPGAVQ LPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLL TALDI+WY
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 ASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFFSI 300
            SNFMPLIHYNGT++MQYWAAVGFIYISIL +C+RSSLLGTYAKIPFI ENALIHTFFS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327

Query: 301 GRYYRPF 307
           GRY+RPF
Sbjct: 328 GRYFRPF 334

[Close]

BLAST of Lcy08g005660 vs. NCBI nr
Match: XP_022969165.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 502.7 bits (1293), Expect = 2.3e-138
Identity = 245/307 (79.80%), Postives = 269/307 (87.62%), Query Frame = 0


Query: 1   MFAFAP-GTARFHCNSPNPLLPPPSTATSPASSLRYKDGVLKRCFKPSRVVMPQCSRLGC 60
           MFA AP  +AR  CNSPNPLL  P+T  + ASS+RY+D VLK CFKPS+VV+PQC RLGC
Sbjct: 28  MFAVAPSSSARLRCNSPNPLLSMPATMMATASSVRYRDVVLKGCFKPSQVVVPQCRRLGC 87

Query: 61  ANLNTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPR 120
           ANL   LVL +S  KQE C+ELK SSSRG +ISHLSA +SP L GEQGSLF KLPLLPPR
Sbjct: 88  ANLGPNLVLFISNTKQEPCKELKFSSSRGMVISHLSAAASPTLCGEQGSLFHKLPLLPPR 147

Query: 121 NCVSKSPQAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLEHLD 180
               KSPQAFRD+SYGVKR++ +TKKPEWWWRTLACVPY+MALQMSSTAYYLLPLLEHL+
Sbjct: 148 KYARKSPQAFRDDSYGVKRHSMITKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 VDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWY 240
           VDNLIFYVPGAVQ LPWWFPMLY NLAYFGVVRNKELPHFIRFHVMMGMLL TALDI+WY
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYVNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 ASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFFSI 300
            SNFMPLIHYNGT++MQYWAAVGFIYISIL +C+RSSL+GTYAKIPFI ENALIHTFFS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLIGTYAKIPFISENALIHTFFST 327

Query: 301 GRYYRPF 307
           GRY+RPF
Sbjct: 328 GRYFRPF 334

[Close]

BLAST of Lcy08g005660 vs. NCBI nr
Match: KAG6572342.1 (Protein TIC 20-IV, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 502.7 bits (1293), Expect = 2.3e-138
Identity = 245/307 (79.80%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 1   MFAFAPGT-ARFHCNSPNPLLPPPSTATSPASSLRYKDGVLKRCFKPSRVVMPQCSRLGC 60
           MFA AP + AR  CNSPNPLL  P+T  + ASS+RY+D +LK CFKPS+VV+PQC RLGC
Sbjct: 1   MFAVAPSSGARLRCNSPNPLLSTPATTMATASSVRYRDVILKGCFKPSQVVVPQCRRLGC 60

Query: 61  ANLNTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPR 120
           ANL T LVL +S  KQE C+ELK SSS G LISHLSA +SP L GEQGSLF KLPLLPPR
Sbjct: 61  ANLGTNLVLSISNTKQEPCKELKFSSSGGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 120

Query: 121 NCVSKSPQAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLEHLD 180
               KSPQAFRD+SY VKR++ VTKKPEWWWRTLACVPY+MALQMSSTAYYLLPLLEHL+
Sbjct: 121 KYAGKSPQAFRDDSYSVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 180

Query: 181 VDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWY 240
           VDNLIFYVPGAVQ LPWWFP LYFNLAYFGVVRNKELPHFIRFHVMMGMLL TALDI+WY
Sbjct: 181 VDNLIFYVPGAVQNLPWWFPTLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 240

Query: 241 ASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFFSI 300
            SNFMPLIHYNGT++MQYWAAVGFIYISIL +C+R SLLGTYAKIPFI ENALIHTFFS 
Sbjct: 241 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRRSLLGTYAKIPFISENALIHTFFST 300

Query: 301 GRYYRPF 307
           GRY+RPF
Sbjct: 301 GRYFRPF 307

[Close]

BLAST of Lcy08g005660 vs. NCBI nr
Match: XP_022952618.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 502.3 bits (1292), Expect = 3.0e-138
Identity = 246/307 (80.13%), Postives = 267/307 (86.97%), Query Frame = 0


Query: 1   MFAFAPGT-ARFHCNSPNPLLPPPSTATSPASSLRYKDGVLKRCFKPSRVVMPQCSRLGC 60
           M A AP + AR  CNS NPLL  P+T  + ASS+RY+D VLK CFKPS+VV+PQC RL C
Sbjct: 28  MIAVAPSSGARLRCNSQNPLLSMPATTMATASSVRYRDVVLKGCFKPSQVVVPQCRRLDC 87

Query: 61  ANLNTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPR 120
           ANL T LVL +S  KQE C+ELK SSSRG LISHLSA +SP L GEQGSLF KLPLLPPR
Sbjct: 88  ANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLPLLPPR 147

Query: 121 NCVSKSPQAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLEHLD 180
               KSPQ FRD+SYGVKR++ VTKKPEWWWRTLACVPY+MALQMSSTAYYLLPLLEHL+
Sbjct: 148 KYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLN 207

Query: 181 VDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWY 240
           VDNLIFYVPGAVQ LPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLL TALDI+WY
Sbjct: 208 VDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWY 267

Query: 241 ASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFFSI 300
            SNFMPLIHYNGT++MQYWAAVGFIYISIL +C+RSSLLGTYAKIPFI ENALIHTFFS 
Sbjct: 268 TSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIHTFFST 327

Query: 301 GRYYRPF 307
           GRY+RPF
Sbjct: 328 GRYFRPF 334

[Close]

BLAST of Lcy08g005660 vs. TAIR 10
Match: AT4G03320.1 (translocon at the inner envelope membrane of chloroplasts 20-IV )

HSP 1 Score: 211.5 bits (537), Expect = 9.8e-55
Identity = 109/248 (43.95%), Postives = 158/248 (63.71%), Query Frame = 0


Query: 63  NTKLVLPVSCAKQESCQELKVSSSRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPRNCV 122
           + KL L  S   +   +E+   S+   +    +ATSS  L        + LP L P    
Sbjct: 42  SAKLRLSASSISRRCPREIAPLSATASVDFAAAATSSNQL------FANGLPPLAPGLRR 101

Query: 123 SKSP----QAFRDNSYGVKRYTEVTKKPEWWWRTLACVPYVMALQMSSTAYYLLPLLE-H 182
            + P    +  +D+ + +K   ++ ++PEWWWRTLACVPY+++LQ+S   +Y+ P LE H
Sbjct: 102 HRRPIEPARVAKDDFFKIK-LPKIAERPEWWWRTLACVPYLISLQISDVGFYVQPFLEKH 161

Query: 183 LDVDNLIFYVPGAVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDII 242
             + ++I+++PGA+ + P WF M+Y  L Y  VV+NKELPH++RFH+MMGMLLETAL +I
Sbjct: 162 DAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFHMMMGMLLETALQVI 221

Query: 243 WYASNFMPLIHYNGTFAMQYWAAVGFIYISILLVCVRSSLLGTYAKIPFIFENALIHTFF 302
           W  SNF PLIH+ G F M YW A+GF YI +LL C+R +L G YA+IPF+ + A IHT F
Sbjct: 222 WCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQIPFMTDAASIHTLF 281

Query: 303 SIGRYYRP 306
           ++G + RP
Sbjct: 282 NLGGFQRP 282

[Close]

BLAST of Lcy08g005660 vs. TAIR 10
Match: AT1G04940.1 (translocon at the inner envelope membrane of chloroplasts 20 )

HSP 1 Score: 191.8 bits (486), Expect = 8.0e-49
Identity = 106/212 (50.00%), Postives = 137/212 (64.62%), Query Frame = 0


Query: 86  SRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPRNCVSKSPQAFRDNSYGVKRYTEVTKK 145
           SRG  +S+LSA+SS  L+GEQGSL   LP+LP R     +P+A +D      R+  +TKK
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 146 PEWWWRTLACVPYVMAL----QMSSTAYYLLPLLEHLDVDNLIFYVPGAVQKLPWWFPML 205
           P+WWWRTLAC+PY+M L      + TAY+L P LE  D + L +   GA+ +LP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 206 YFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWYASNFMPLIHYNGTFAMQYWAAV 265
           YF +AY G+VR KE PHF RFHV+MGMLLE AL +I   S +MPL  Y G F M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 266 GFIYISILLVCVRSSLLGTYAKIPFIFENALI 294
            F Y+  +L  +R +L G YA IPF+ + A I
Sbjct: 241 AFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

[Close]

BLAST of Lcy08g005660 vs. TAIR 10
Match: AT1G04945.3 (HIT-type Zinc finger family protein )

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-44
Identity = 98/196 (50.00%), Postives = 127/196 (64.80%), Query Frame = 0


Query: 86  SRGFLISHLSATSSPHLSGEQGSLFDKLPLLPPRNCVSKSPQAFRDNSYGVKRYTEVTKK 145
           SRG  +S+LSA+SS  L+GEQGSL   LP+LP R     +P+A +D      R+  +TKK
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 146 PEWWWRTLACVPYVMAL----QMSSTAYYLLPLLEHLDVDNLIFYVPGAVQKLPWWFPML 205
           P+WWWRTLAC+PY+M L      + TAY+L P LE  D + L +   GA+ +LP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 206 YFNLAYFGVVRNKELPHFIRFHVMMGMLLETALDIIWYASNFMPLIHYNGTFAMQYWAAV 265
           YF +AY G+VR KE PHF RFHV+MGMLLE AL +I   S +MPL  Y G F M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 266 GFIYISILLVCVRSSL 278
            F Y+  +L  +R +L
Sbjct: 241 AFAYLFTVLESIRCAL 253

The following BLAST results are available for this feature:

BLAST of Lcy08g005660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQZ9	1.4e-53	43.95	Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=...	[more]
Q8GZ79	1.1e-47	50.00	Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 ...	[more]
Q9ZST8	1.2e-36	39.81	Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1	[more]

BLAST of Lcy08g005660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZ71	1.1e-138	79.80	Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1	[more]
A0A6J1GL44	1.4e-138	80.13	Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1	[more]
A0A6J1GMA4	1.4e-138	80.13	Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1	[more]
A0A6J1HX02	3.9e-136	79.48	Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1	[more]
A0A6J1GM78	5.1e-136	79.80	Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1	[more]

BLAST of Lcy08g005660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888476.1	1.2e-147	83.01	protein TIC 20-IV, chloroplastic [Benincasa hispida]	[more]
XP_023554543.1	5.4e-140	80.78	protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022969165.1	2.3e-138	79.80	protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita maxima]	[more]
KAG6572342.1	2.3e-138	79.80	Protein TIC 20-IV, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022952618.1	3.0e-138	80.13	protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Lcy08g005660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03320.1	9.8e-55	43.95	translocon at the inner envelope membrane of chloroplasts 20-IV	[more]
AT1G04940.1	8.0e-49	50.00	translocon at the inner envelope membrane of chloroplasts 20	[more]
AT1G04945.3	2.0e-44	50.00	HIT-type Zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005691	Chloroplast protein import component Tic20	PFAM	PF16166	TIC20	coord: 127..291 e-value: 5.7E-63 score: 212.0
IPR005691	Chloroplast protein import component Tic20	PANTHER	PTHR33510	PROTEIN TIC 20-II, CHLOROPLASTIC	coord: 60..306
None	No IPR available	PANTHER	PTHR33510:SF12	PROTEIN TIC 20-IV, CHLOROPLASTIC	coord: 60..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g005660.1	Lcy08g005660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion