Lcy08g005630 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g005630
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr08: 7133956 .. 7141325 (+)
RNA-Seq Expression	Lcy08g005630
Synteny	Lcy08g005630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATCCACTCTTTCCGCTGCTGGAGTTCTCAAACGCACCGTATTACTGCAAATTCCAGTGTGCACGGTTAGGTTCGGTTCGGTCTTCTCCAGAATCGAACCGACGGTTCTATTTTGTTTCACAAACCGGTTCAATTGAACCGTTTCGTTTAGTTAAAATAAAGGCTATAATTTAAATAAGAAAACGATTACCAGCTACAGAAGCTTCCACGACTCAAACCCAGAAGACTCGGCACAGATCGAAAAACCCTATTCCTTCTGGGAACTATCTGTTCAAGGCCATTTTCACCGGCTACAGAAGCTTGCACGACTCTAATAACAGCGATTGTTGTTTCTTTTGTTCTCTCTGGACCACCGACGGCGGTGTTCGCCGTCCGGAATCGAGCATGATAACCATGTCCAGGTACTTGAGGCTTGTTGCTGATACCAATTGTGTGGTTCGAACCGCTTTCGCATTTACTTACATTTTCGATTTCAGTTCTGGCGGGTCATGTCGGTTTAGGAACTTGCTGTCTACCTGGAATGTTCTACATTTCTCGAACACTGTATGTGGAACCTCTAAATTTCTTCCATTTTGTTTGTTTGTGTAGTTCTGCTCCGGGAAATTGGATGGTTTTGCTATGAACTGTGTTTACCAATTAGATTGAACCGAGGAATTTGTTGATTTGTCTGTGCGTGTTGTCTTGCCATTTCTATGGGGAATGAAACAATGTCATGATCAAAACGAAAGTTTGTCCATTGGTTTTGAATTCTCAATGTAAGCCTTTGTGTTGTTCACACAATTTTGTAATACTCCGGTGGCTTGGAAATGTTTTTACTCCATATTATTTACTATAAGTTCTGAAGGTAAGGGATATGCATGTCCAAATTAGAATTCATGGCTATAGAGTTTTTGCTTCTGGCCTGCTGATCCAATCAACACTGCTGAGGATACTCTGTAGATGTTATAATTATAGATAGGTGAAATCCAGATCATTTCTCAAACTCTCTTCTTGGTCTCCATCTAAGAAGCACAGACACTTTAGTTTGGCTAGTGTGTCCGTGTCCGACACATGTCGGAAACTTGGACACTCCGACACTTGTTAGCATAGTTGATGTACAAAGTCAATATAGGTCTATGTCGAACACTAAGTATACTAAATAGGCATAATACTAAATGAAAAAAATAATAAATTTTAAGAATGAAATACATTAAACTCATTTTTTTAAGCATACAAATGCATAAGCTTATTGATTTTGAATTTCCTTCTTGTATAAAAATGATATATATTTTAAAAAATGTATATTTTACTGAGTGTGTCCATACCGTGTCCATGTCCTAGATTTTAAAAAAATGGCGTGTCACCGTGTCCGTGTCGTGTCATATCCGTGTCTCGTGTCCATATCCATGCTTCTGAGGTCTCCATTATGAAGACTCTTTGGATCTCTTCTTTAAAGAAAATCTATGATTGGGTAGGCTTTGCTATTACCGATCATATTTTTCTAGAGCTTAAATCTAATCTTTCTTCACAAACTTAATTTACTAAAAATTTTTTCCTTCATATCAATTATTGGAAACCCGGATTTTGGCAGCTCAATAGTCATTTAATTTAGGCCCATGGGTCGCAAACCAAATCCATGAGGTCATTTAAGGGTTTCATTGAGGAGAGTGGTTTGATGGATCCTCCCTTAGTGAACCGGAGATTTACCTGGGCTAATAGCAGAGCCGGGAGTAGGATTGATAGATGTTTGCTGTCGAAGGGATGGATGGAGCTGTTTGGGAGTGTTAGACAAGAGTTAGGCCCGCGAGTGACTTCAGATCATTGGCCTCTTATTCTGAACTCAGGCTCCATCAATTGGGGCCCATGCCCTTTTAGATTCGAGAATATGTGGATGGAGCACCCTTCTTTCAAATCTTGTGTTTCATCTTGGTGGAATGAGGATTCGGTAGGTAAATGGGAAGACTTTCACTTCATGGAGAAGTTGAGATTGGTTAAAAACAAGCTCAAGGGTTGGAATCGTGAGATGTTTGGGGAAGTTAAGAGACTGAAGCAAGAGATTCTGGGGAGGATTAGATCCATTGACGATATGGAAGAGTCCGGGAGCTTATCTGAGAATCTAAAAGAGGATCGTACGATCTTAAGACTTGAGTTCGCTGAGATATTGCGGAAAGAATCCTGTAGTTGGAGGCAAAAGGCGAAAGTTCAATGGGCTAAGGAAGGGGATTGTAACTCTTCTTTTTTCCATTGGGTGGCGAACGGAAGAAGAAGTAAAAATCTCATTAGCTCTTTAGTTAATGACAAAGGGGAGGTTGTTAGAGAGGCTAAGGAGATTGAGGAGGAGATTCTTTCTTTGAAGCCCTTTATGGCCCTTCCATGGAGAATAAACCTTTTGTCGAAGGTGTGGATTGGAGCCCTATTTCGGATGAGGAGAGAAGGAGTCTGGACTCCCCTTTTTCAGTAGAAGAAATTAAAAAGGTTATTTTTGAGTGCGACAGGAACAAATCTCCCGGCCCTGATGGTTTTTCGATGGGATTCTTCTAGGAGAATTGGGAGATTATAAAGCAGGATTTGGAGAGAGTGTTCAAGGAGATTTTTTTTTTTTTTTTTTTTTTTTGATAAGAAACAATTTCATTGATGTATGAAATTTACAAAAAGGATGTGAAATCCATGGAGATTACAAAAGGCTTTCCCAATTGATAAGGAGGGAAGCATATGAGTAAGGAGAAAAAAGCTTGGACAATTTACACCAAGAGATAGCATAATAGATAACTAAATCAAAGAACGTATCAAAGGAGCTTTCTATATTTTGAAACACTCTATTGTTCCGTTCTTTCCAAAGAATCCAAAAGAAAGCCCTAGATATATTCAACCATAGTATAGACTTCTTGTTCTTAAAAGGATGCTCCAAAAAAATAGTGCAGATAGTCTTTAATATTTCCTGGAGAAGCCAAATACCATCCAAAAGAGTTCAAAATTTTATACCAGAATTGTTTAGCAAATGGACAGTGGATAAAAATGTGATCTTGAGATTCATCTTCAGCTTTGCAAAGAGAACACCACCCGGGAGATAGTGTCGCAAAGGGAATGCGTCATGGTCTATCTCCCATATTAGCTAGAAGAGATCTCACAGAGAACTGTCCATTGGGATTGAGTGGCCAATTCCATTTGTTCAAGGAGTTTTTTGACAGGGGCATAATCGACAGGGGTTGAATGAAACTTTTGTGTGCCTTATTCCTAAAAAGGACAGGGTGGAAAGAGTGAAAGACTATAGGCCTATTAGCCTGATCACGAGTGTTTACAAGATCATTGCTAAAGTGTTAGCCAATAGACTGAAAAAGATCCTCCCTTCAATGATATTCGAGTCTCAAGGAGCTTTTATTGAAGGGAGACAAATCCTTGATCAAGCGCTGATAGCTAACGAGGCTATAGAGGATTACAGGAGGAGAAAGAAGGAGGGAGTGCTATTCAAGATTGACTTTGAAAAAGCATACGATCACGTTGATTGGGATTTCCTTGATAAGGTCTTGGCTATGAAAGGTTTGGGGTATCGTTGGAGATCGTGGATCTAGGGATGTGTGAGATCAGATAGGTATTCTATTCTCATTAACAGGTGCCCTAAAGGTAAAATTTGTGCTTCTAGAGGCCTTAGACAAGGCGATCCACTGTCCCCCTTCTTGTTCTTGCTTGTGGTGGATGTTTTGAGCACGTTGGTCTCTAAAGTGTTAAAGGGGGGATCTTGAAGGGATTTGAGGTGGGGAGGGAGGGAGTGGCCTTATCTCACCTTCAGTTTGCTGATGACACTTTATTCTTTTGCTTGGGGGAGGAGAATTCCTTTCTTTTATTGAGTCATATCCTAGAGTTCTTTGAGTCGATGTCGGGGCTCAAGATTAATAGAAGGAAGTGTCAGGTGTTAAGTGTTAAGTGCCCTATTGAGAAAATGGAGAGGCTTGCTAACATGGTCGGGTGCGATATTGGTTCCCTCCCCTCCTCCTACCTAGGGCTTCCGTTAGGCCATAGAGTCTCCAAAAAGAGATTAGCCTCGTGGAAGAAATGCTTCTTTTCTATAGGAGGAAGGATGACCTTGATTCGCTCGGTGCTAAGTGGAATCTCGGTCTACTTCTTATCTCTGTTTAAAGCCCCCAAATTTGTGTCAGAGCTTGGAAAAGCTTATGAGAGATTTCTTATGGGAGGGAGTGGATGAAAGGGGGGTAACCACTTAGTCAATTGGGAGACAGTGAGCAAACCTGTGGGTCTTGGTAGGCTAGAATTAGGGAATCTGAATCTGAGAAATAGAGCGTTGCTAGCTAAATGGCTTTGGCGGTTCCCGCTCGAGTCGACCTCCTTTTGGCATTGGATTATCGTTAGTTTGTACGACTATCATCCCTACGAGTGGTTGTAGGGGGGTTTAAAGGCATGTCTAGAAATCCATGGAAAGATATTTTCTTCGAGCTCGGTTTTTTTGAGTCTAATTCATTGTGTGGTGGGTGAAGGGAGGGATATTTACTTTTGGGAGGATAAGTGGGTGGGGGATTGTTCCCTCTGCCCCAAGTTTCCTAATCTCTGTCGTTTGTCCTCCATGAAAAATAGGATGATCGCTGATATTATTACGGTCTCCGGGAGTTCTCCTTCTTATTCTTATTCTTGGGTTTCTAGCGCTCTTTGACCAATAGGGAAGTGGTGGAGGTTATAACTCTCTTGTCTTTGATAGGGGAGCTTCAGTTTAGGGAGGGGAGGGATTTTCGCAATTGGTCTTAGCCCTTCTAAGGGCTTTTCGTGTAGTTCCTTCTTTCAGTGGTTGCTCAATCCCTCCCCCGTAGGGAGTCTATCTTTTCAGTTCTTTGGAGGGTGAAAATTCCTAAGAAGGTTAGATTCTTTACCTGGCAAGTTATCCATGGAAGAGTTAATACTTTCGACATTTTCACGAGAAAGATGACTTCGTTGCTGGGGCCATTTTGTTGTATCCTTTGCCGGAGGGCAGAGGAAGACCTGGATCATATTTTGCGGAGTTGTGCCTTTGCTCGCTCAATTTGGAGTTTGTTCTTTGATGTTTTTGGGTTGCAGGGTAGGAGCTCCACAGGTTACAGGGAGATGATTGAGGAGTTCCTCCATCTGCCATTTAGAGATAAGGGGAGGGAGTTATGGTTTGTCGGGGTGTGCGCTGTTTTGTGGGGTTTGTGGGGAGAGAGAAACAATAGGGTTTTTAGAAGGGTGGAGAGGTCCCCATCTGATGTGTGGACCCTCATTAGATTTCATGTTTTTCTTTGGGCTTCGGTTTCAAAGACCTTTTGTAACTATTCGATAGGTGTTATAATCAAGAGACCTTTTGTAACTATTCGATAGGTGTTATTATCCTTGATTGGAGCCCCTTCCTTTAGCAGGGTTCACTTTTGTGGGCTAGGTTTTAATTTAACTTATCCTTAAGAAATTCTGCTATTCAACTTGGTAAAGAATTACATCTTATTCAACTTCACATCTTACCTGCATAATCTTTTAGATGATTACACGTGACTTATACTATGCAAAGTAAACGTTTAATTTCGTCCCTACATGTCTAATACAGAATAGCATTGCATCTATCCCAGTTGGTAACCCTCAAATCTGGCTGCTTTTTGCCATCATGGATAAACGCTTTGGTCATCAGTCATCTACTACAGATATCTCTCCTGATGAAGAGAAAGTGAGCGATGAAGTCTTGAATCAGATTATTGCCACAAGGGAAAAGGCCTCAAGGTGTAGCCGGGAAACTTTTGATGTTTGCATTGATAAGATGTGTAGATCTGGAAATCTTGCAGCTGCTGCTCAATTACTTAAATATTTGTGCGAGAGGAAAATATCTCTTAGCTCCCCCAAGGCGTATGATATGATTTTGCTTGCAGCAAGTGAAAGTGGAGACATTACCCTTTTATGTCAAGTTTTTAAATATTGCCTGGTTTCCTGTAAATCATTGAGTTCGAACTCTTACATGAATTTTGCCAAGCCCTTTACCAGGACAGATGATATTAGCAAGCTACTGGAATATGTCAAAGAAATAATTGAGATGAACTTTCCAAACCTAATAGTTATAAACAGAATTATCTTTGCCTTCTCCAAATGTAAGGAGATTGATAAAGCCCTTCAGATATTTAATCAGATGAAGCTTCTGTCATGCAGACCAGATTTGTATACATATAATATCATTTTGGATATGCTAGGTCGTGCAGGTCGCATGGATGAAACTCTTCATATGTTTGTTTCCATGAAAGATGATGGCATTGCCCCAGATATTGTGTCCTATAATACATTAATAAATAGCTTAAGGAAGGTGGGTAGACTAGATCTGTGCTTGATTTACTTCAGGGAAATGGTTGCAATGAGAATTGAACCTGATTTGCTTACTTATACTGCTTTGATAGAGAGTTTTGGTCGATCTGGAAATATCGAGGAAGCTTTGACACTCCTCAGAGAGATGAAGCTTAAGAATGTCTATCCTTCAAGTTATATCTACAAATCTCTGATCAGTAATTCAATGAAGATTGGGAAGGTGGAGTTGGCAATGAACCTTCTCAAGGAGATGAAATTAAGTTATTTAAAACTTGCTGGTCCACAAGATTTCAAACGAAGAAAGAGGTAACCAATTACAAGGTTTTTCATAGTGACTCAAGGTTGATAAGCCTGTGTGGATTGGCTCCAAACTTCAAGCTGAGCTATGCCCAAGTAATTCTGCCAGCTGGTAATATCTGTAATCATTTATCTACCTCTTATTGTTCTGACATGATTTACAAAACATCTAAAAAATATTCTCGTATGGAGTTGGGATTCATTTTAGGACCAATGTATGAAAACCCAAGATGGGTATTTAGTTGTCTGTCATGTAAGATGTAACTAAGGTGTTTTGAGTAAAATGATGTGTAGAAAAATGTGTCATGTTCCAGCAATGATTCATTGTCTCTCTTTTATTACAGGTCTGCAGAGAATGATAATGGTTCAAGTGAAGAGCCAGAGAAAAAATCTGTAACTAATTGTGGAGGATTTTCTTGAAAATTTTACAACCATGGCACATGGCATCTTCTGAAAGTTGTTGCTGCTACACGCTTCACTGGTGAAAATTTCTTCAAGTAGAGGAAGATGAAGTGAACAGAGGAAAACATGTAGGTTCGATCTTCACTGGAGTTAGTTATGTGAGGTGCTTACAAGAAAGTAGGATACTATAGGAAACAAGAGTGATTTCTTGCTTGTATCATTCTATTAGATTCACTGAATATTCAATTCCAAACCAGGACCCAGGAGGACCCATAACACCAGATGAAAATTTTCCATGCTTTTGTGTATAGTTTATGGTGGAATAATCTACCAATCCAAGCGTGAATATGTTGTAATATCACATTTTTTTAATCAATCTAATTCCTTC

mRNA sequence

ATGATATCCACTCTTTCCGCTGCTGGAGTTCTCAAACGCACCGTATTACTGCAAATTCCAGTGTGCACGGTTAGAAAACGATTACCAGCTACAGAAGCTTCCACGACTCAAACCCAGAAGACTCGGCACAGATCGAAAAACCCTATTCCTTCTGGGAACTATCTGTTCAAGGCCATTTTCACCGGCTACAGAAGCTTGCACGACTCTAATAACAGCGATTGTTGTTTCTTTTGTTCTCTCTGGACCACCGACGGCGGTGTTCGCCGTCCGGAATCGAGCATGATAACCATGTCCAGTTCTGGCGGGTCATGTCGGTTTAGGAACTTGCTGTCTACCTGGAATGTTCTACATTTCTCGAACACTAATAGCATTGCATCTATCCCAGTTGGTAACCCTCAAATCTGGCTGCTTTTTGCCATCATGGATAAACGCTTTGGTCATCAGTCATCTACTACAGATATCTCTCCTGATGAAGAGAAAGTGAGCGATGAAGTCTTGAATCAGATTATTGCCACAAGGGAAAAGGCCTCAAGGTGTAGCCGGGAAACTTTTGATGTTTGCATTGATAAGATGTGTAGATCTGGAAATCTTGCAGCTGCTGCTCAATTACTTAAATATTTGTGCGAGAGGAAAATATCTCTTAGCTCCCCCAAGGCGTATGATATGATTTTGCTTGCAGCAAGTGAAAGTGGAGACATTACCCTTTTATGTCAAGTTTTTAAATATTGCCTGGTTTCCTGTAAATCATTGAGTTCGAACTCTTACATGAATTTTGCCAAGCCCTTTACCAGGACAGATGATATTAGCAAGCTACTGGAATATGTCAAAGAAATAATTGAGATGAACTTTCCAAACCTAATAGTTATAAACAGAATTATCTTTGCCTTCTCCAAATGTAAGGAGATTGATAAAGCCCTTCAGATATTTAATCAGATGAAGCTTCTGTCATGCAGACCAGATTTGTATACATATAATATCATTTTGGATATGCTAGGTCGTGCAGGTCGCATGGATGAAACTCTTCATATGTTTGTTTCCATGAAAGATGATGGCATTGCCCCAGATATTGTGTCCTATAATACATTAATAAATAGCTTAAGGAAGGTGGGTAGACTAGATCTGTGCTTGATTTACTTCAGGGAAATGGTTGCAATGAGAATTGAACCTGATTTGCTTACTTATACTGCTTTGATAGAGAGTTTTGGTCGATCTGGAAATATCGAGGAAGCTTTGACACTCCTCAGAGAGATGAAGCTTAAGAATGTCTATCCTTCAAGTTATATCTACAAATCTCTGATCAGTAATTCAATGAAGATTGGGAAGGTGGAGTTGGCAATGAACCTTCTCAAGGAGATGAAATTAAGTTATTTAAAACTTGCTGGTCCACAAGATTTCAAACGAAGAAAGAGGTAACCAATTACAAGGTTTTTCATAGTGACTCAAGGTTGATAAGCCTGTGTGGATTGGCTCCAAACTTCAAGCTGAGCTATGCCCAAGTAATTCTGCCAGCTGGTCTGCAGAGAATGATAATGGTTCAAGTGAAGAGCCAGAGAAAAAATCTGTAACTAATTGTGGAGGATTTTCTTGAAAATTTTACAACCATGGCACATGGCATCTTCTGAAAGTTGTTGCTGCTACACGCTTCACTGGTGAAAATTTCTTCAAGTAGAGGAAGATGAAGTGAACAGAGGAAAACATGTAGGTTCGATCTTCACTGGAGTTAGTTATGTGAGGTGCTTACAAGAAAGTAGGATACTATAGGAAACAAGAGTGATTTCTTGCTTGTATCATTCTATTAGATTCACTGAATATTCAATTCCAAACCAGGACCCAGGAGGACCCATAACACCAGATGAAAATTTTCCATGCTTTTGTGTATAGTTTATGGTGGAATAATCTACCAATCCAAGCGTGAATATGTTGTAATATCACATTTTTTTAATCAATCTAATTCCTTC

Coding sequence (CDS)

ATGATATCCACTCTTTCCGCTGCTGGAGTTCTCAAACGCACCGTATTACTGCAAATTCCAGTGTGCACGGTTAGAAAACGATTACCAGCTACAGAAGCTTCCACGACTCAAACCCAGAAGACTCGGCACAGATCGAAAAACCCTATTCCTTCTGGGAACTATCTGTTCAAGGCCATTTTCACCGGCTACAGAAGCTTGCACGACTCTAATAACAGCGATTGTTGTTTCTTTTGTTCTCTCTGGACCACCGACGGCGGTGTTCGCCGTCCGGAATCGAGCATGATAACCATGTCCAGTTCTGGCGGGTCATGTCGGTTTAGGAACTTGCTGTCTACCTGGAATGTTCTACATTTCTCGAACACTAATAGCATTGCATCTATCCCAGTTGGTAACCCTCAAATCTGGCTGCTTTTTGCCATCATGGATAAACGCTTTGGTCATCAGTCATCTACTACAGATATCTCTCCTGATGAAGAGAAAGTGAGCGATGAAGTCTTGAATCAGATTATTGCCACAAGGGAAAAGGCCTCAAGGTGTAGCCGGGAAACTTTTGATGTTTGCATTGATAAGATGTGTAGATCTGGAAATCTTGCAGCTGCTGCTCAATTACTTAAATATTTGTGCGAGAGGAAAATATCTCTTAGCTCCCCCAAGGCGTATGATATGATTTTGCTTGCAGCAAGTGAAAGTGGAGACATTACCCTTTTATGTCAAGTTTTTAAATATTGCCTGGTTTCCTGTAAATCATTGAGTTCGAACTCTTACATGAATTTTGCCAAGCCCTTTACCAGGACAGATGATATTAGCAAGCTACTGGAATATGTCAAAGAAATAATTGAGATGAACTTTCCAAACCTAATAGTTATAAACAGAATTATCTTTGCCTTCTCCAAATGTAAGGAGATTGATAAAGCCCTTCAGATATTTAATCAGATGAAGCTTCTGTCATGCAGACCAGATTTGTATACATATAATATCATTTTGGATATGCTAGGTCGTGCAGGTCGCATGGATGAAACTCTTCATATGTTTGTTTCCATGAAAGATGATGGCATTGCCCCAGATATTGTGTCCTATAATACATTAATAAATAGCTTAAGGAAGGTGGGTAGACTAGATCTGTGCTTGATTTACTTCAGGGAAATGGTTGCAATGAGAATTGAACCTGATTTGCTTACTTATACTGCTTTGATAGAGAGTTTTGGTCGATCTGGAAATATCGAGGAAGCTTTGACACTCCTCAGAGAGATGAAGCTTAAGAATGTCTATCCTTCAAGTTATATCTACAAATCTCTGATCAGTAATTCAATGAAGATTGGGAAGGTGGAGTTGGCAATGAACCTTCTCAAGGAGATGAAATTAAGTTATTTAAAACTTGCTGGTCCACAAGATTTCAAACGAAGAAAGAGGTAA

Protein sequence

MISTLSAAGVLKRTVLLQIPVCTVRKRLPATEASTTQTQKTRHRSKNPIPSGNYLFKAIFTGYRSLHDSNNSDCCFFCSLWTTDGGVRRPESSMITMSSSGGSCRFRNLLSTWNVLHFSNTNSIASIPVGNPQIWLLFAIMDKRFGHQSSTTDISPDEEKVSDEVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKAYDMILLAASESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMNFPNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETLHMFVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESFGRSGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYLKLAGPQDFKRRKR

Homology

[Close]

BLAST of Lcy08g005630 vs. ExPASy Swiss-Prot
Match: Q5BIV3 (Pentatricopeptide repeat-containing protein At1g11900 OS=Arabidopsis thaliana OX=3702 GN=At1g11900 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-62
Identity = 140/318 (44.03%), Postives = 206/318 (64.78%), Query Frame = 0


Query: 159 EKVSDEVLNQIIATREKASR-CSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSP 218
           E+  +E+L +I+   E  S+  S+  +   ++K  R GNL+ A  LL+ L E+ I L   
Sbjct: 47  EEDEEELLKKIVNHSESGSKIISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPI- 106

Query: 219 KAYDMILLAASESGDITLLCQVFKYCLV--SCKSLSSNSYMNFAKPFTRTDDISKLLEYV 278
             +  +L AA E  D+ L C+VF+  L+    + LSS+ Y+N A+ F  TDD + L   +
Sbjct: 107 SVFKNLLAAAGELNDMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLL 166

Query: 279 KEIIEMNFP-NLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRA 338
           KEI E + P  LIV+NRIIFAF++ ++IDK L I  +MK   C+PD+ TYN +LD+LGRA
Sbjct: 167 KEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRA 226

Query: 339 GRMDETLHMFVSMKDD-GIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLT 398
           G ++E L +  +MK+D  ++ +I++YNT++N +RK  R D+CL+ + EMV   IEPDLL+
Sbjct: 227 GLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLS 286

Query: 399 YTALIESFGRSGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMK 458
           YTA+I+S GRSGN++E+L L  EMK + + PS Y+Y++LI    K G  + A+ L  E+K
Sbjct: 287 YTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 346

Query: 459 -LSYLKLAGPQDFKRRKR 471
             S L LAGPQDFKR  R
Sbjct: 347 NTSSLDLAGPQDFKRHLR 363

[Close]

BLAST of Lcy08g005630 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 3.8e-26
Identity = 81/297 (27.27%), Postives = 147/297 (49.49%), Query Frame = 0


Query: 160 KVSDEVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKA 219
           K  D+ LN       K  R +  T+   I  +C  G  + A++LL  + ERKI+      
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PDVFT 329

Query: 220 YDMILLAASESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPF---TRTDDISKLLEYVK 279
           +  ++ A  + G +    +++   +      S  +Y +    F    R D+  ++ E++ 
Sbjct: 330 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM- 389

Query: 280 EIIEMNFPNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGR 339
            + +  FP+++  N +I  F K K +++ +++F +M       +  TYNI++  L +AG 
Sbjct: 390 -VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 449

Query: 340 MDETLHMFVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTA 399
            D    +F  M  DG+ P+I++YNTL++ L K G+L+  ++ F  +   ++EP + TY  
Sbjct: 450 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 509

Query: 400 LIESFGRSGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMK 454
           +IE   ++G +E+   L   + LK V P    Y ++IS   + G  E A  L KEMK
Sbjct: 510 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563

[Close]

BLAST of Lcy08g005630 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 6.4e-26
Identity = 78/292 (26.71%), Postives = 145/292 (49.66%), Query Frame = 0


Query: 163 DEVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKAYDM 222
           ++ LN       K  R +  T++  I  +C  G  + A++LL  + ERKI+  +   +  
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSA 331

Query: 223 ILLAASESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMN 282
           ++ A  + G +    +++   +         +Y +    F   D + +     + +I  +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391

Query: 283 -FPNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETL 342
            FPN++  N +I  F K K +++ +++F +M       +  TYN ++  L +AG  D   
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 451

Query: 343 HMFVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESF 402
            +F  M  DG+ PDI++Y+ L++ L K G+L+  L+ F  +   ++EPD+ TY  +IE  
Sbjct: 452 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 511

Query: 403 GRSGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMK 454
            ++G +E+   L   + LK V P+  IY ++IS   + G  E A  L +EMK
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562

[Close]

BLAST of Lcy08g005630 vs. ExPASy Swiss-Prot
Match: P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 4.2e-25
Identity = 65/206 (31.55%), Postives = 115/206 (55.83%), Query Frame = 0


Query: 248 KSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMNF-PNLIVINRIIFAFSKCKEIDKAL 307
           K+ S N  ++      +TDD+ +   + K++I     P +   N +I    K  +++ A 
Sbjct: 226 KTRSCNGLLHRFAKLGKTDDVKR---FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 285

Query: 308 QIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETLHMFVSMKDDGIAPDIVSYNTLINSL 367
            +F +MK     PD  TYN ++D  G+ GR+D+T+  F  MKD    PD+++YN LIN  
Sbjct: 286 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 345

Query: 368 RKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESFGRSGNIEEALTLLREMKLKNVYPSS 427
            K G+L + L ++REM    ++P++++Y+ L+++F + G +++A+    +M+   + P+ 
Sbjct: 346 CKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 405

Query: 428 YIYKSLISNSMKIGKVELAMNLLKEM 453
           Y Y SLI  + KIG +  A  L  EM
Sbjct: 406 YTYTSLIDANCKIGNLSDAFRLGNEM 428

[Close]

BLAST of Lcy08g005630 vs. ExPASy Swiss-Prot
Match: Q9ZU27 (Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g51965 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-24
Identity = 79/299 (26.42%), Postives = 144/299 (48.16%), Query Frame = 0


Query: 160 KVSDEVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKA 219
           K+ D+ +       E   R +  T+ + ++ +   G L      L  + E      +   
Sbjct: 319 KMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVR----LDGVVEISKRYMTQGI 378

Query: 220 YDMILLAASESGDIT----LLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYV 279
           Y  ++   S+ G ++    L C ++ + +        +SYM+  +         + +E +
Sbjct: 379 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKG----ERDSYMSMLESLCGAGKTIEAIEML 438

Query: 280 KEIIEMN-FPNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRA 339
            +I E     + ++ N +  A  K K+I     +F +MK     PD++TYNI++   GR 
Sbjct: 439 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 498

Query: 340 GRMDETLHMFVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTY 399
           G +DE +++F  ++     PDI+SYN+LIN L K G +D   + F+EM    + PD++TY
Sbjct: 499 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTY 558

Query: 400 TALIESFGRSGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMK 454
           + L+E FG++  +E A +L  EM +K   P+   Y  L+    K G+   A++L  +MK
Sbjct: 559 STLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK 609

[Close]

BLAST of Lcy08g005630 vs. ExPASy TrEMBL
Match: A0A6J1HYS7 (pentatricopeptide repeat-containing protein At1g11900 OS=Cucurbita maxima OX=3661 GN=LOC111469320 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 3.9e-167
Identity = 312/362 (86.19%), Postives = 330/362 (91.16%), Query Frame = 0


Query: 108 NLLSTWNVLHFSNTNSIASIPVGNPQIWLLFAIMDKRFGHQSSTTDISPDEEKVSDEVLN 167
           +LLS  NVLH+S TNSI SIPVGNPQ WLL+AI  +RFGHQSST +ISPDEEKV DEVLN
Sbjct: 8   SLLSARNVLHYSYTNSITSIPVGNPQNWLLYAI--RRFGHQSSTNNISPDEEKVKDEVLN 67

Query: 168 QIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKAYDMILLAA 227
           QI ATRE ASRCS ETFDVCIDKMCRSGNL AAAQLLK LC+RKISLSS KAYDM+LLAA
Sbjct: 68  QITATRENASRCSHETFDVCIDKMCRSGNLTAAAQLLKSLCDRKISLSSSKAYDMVLLAA 127

Query: 228 SESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMNFPNLI 287
           SE GD TLLCQVFK  LVS K LSS SYMNFAK F RTDD SKLLEYVKEIIEM FPN +
Sbjct: 128 SERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMTFPNFL 187

Query: 288 VINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETLHMFVSM 347
           VINRIIFAFS+C+EIDKALQIFNQMKLLS RPDLYTYNIILD LGRAGRMDE LHMFVSM
Sbjct: 188 VINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHMFVSM 247

Query: 348 KDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESFGRSGNI 407
           K+DGIAPDIVSYNTLINSLRKVGRLD+CLIYFREMVAMRIEPDLLTYTALIESFGRSGN+
Sbjct: 248 KEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGRSGNV 307

Query: 408 EEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYLKLAGPQDFKR 467
           EEALTLLREMKLK++ PSSYIYKSLISNSMKIGKVELAMNLLKEMKLSY KLAGP+DFKR
Sbjct: 308 EEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGPKDFKR 367

Query: 468 RK 470
           ++
Sbjct: 368 KR 367

[Close]

BLAST of Lcy08g005630 vs. ExPASy TrEMBL
Match: A0A6J1D2E8 (pentatricopeptide repeat-containing protein At1g11900-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016680 PE=3 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 7.3e-166
Identity = 308/378 (81.48%), Postives = 333/378 (88.10%), Query Frame = 0


Query: 93  SMITMSSSGGSCRFRNLLSTWNVLHFSNTNSIASIPVGNPQIWLLFAIMDKRFGHQSSTT 152
           S I+  SSGGSCRFRNL ST  VLH+  TN IAS PVG+PQIWL FA M KRF HQS  T
Sbjct: 25  SYISDFSSGGSCRFRNLPSTRKVLHYPYTNCIASFPVGDPQIWLFFANMGKRFSHQSYPT 84

Query: 153 DISPDEEKVSDEVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKI 212
           D SPDEEKV DEVLNQI+ATR+ ASR S ETFD CI KMCRSGNLAAAAQLLK LC+ KI
Sbjct: 85  DTSPDEEKVIDEVLNQIVATRDNASRSSHETFDACIYKMCRSGNLAAAAQLLKSLCDGKI 144

Query: 213 SLSSPKAYDMILLAASESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLL 272
           SLS+ KAYDM+LLAASE GD +L CQVFK CLVSCKSLSS +YMN AK F  T+D+ KLL
Sbjct: 145 SLSASKAYDMVLLAASERGDTSLFCQVFKDCLVSCKSLSSATYMNLAKAFISTNDVGKLL 204

Query: 273 EYVKEIIEMNFPNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLG 332
           EYVKE+IEM FPNLIVIN+IIFAFSKC+EI+KAL+IFNQMKLLSC+PDLYTYNIILDMLG
Sbjct: 205 EYVKEVIEMTFPNLIVINKIIFAFSKCREIEKALRIFNQMKLLSCKPDLYTYNIILDMLG 264

Query: 333 RAGRMDETLHMFVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLL 392
           RAGRMDE LHMFVSMK+ GIAPDIVSYNTLINSLRKVGRLD+CLIYFREMVAMRIEPDLL
Sbjct: 265 RAGRMDEILHMFVSMKEAGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLL 324

Query: 393 TYTALIESFGRSGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEM 452
           TYTA+IESFGRSGNIEEAL LLREMKLKNVYPS+YIYKSLISNSMKIGKVELAM+LL E+
Sbjct: 325 TYTAMIESFGRSGNIEEALGLLREMKLKNVYPSNYIYKSLISNSMKIGKVELAMSLLNEL 384

Query: 453 KLSYLKLAGPQDFKRRKR 471
           KLS   LA P+DFKRRKR
Sbjct: 385 KLSGSNLANPKDFKRRKR 402

[Close]

BLAST of Lcy08g005630 vs. ExPASy TrEMBL
Match: A0A6J1HKH0 (pentatricopeptide repeat-containing protein At1g11900-like OS=Cucurbita moschata OX=3662 GN=LOC111464935 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 3.6e-165
Identity = 309/366 (84.43%), Postives = 330/366 (90.16%), Query Frame = 0


Query: 104 CRFRNLLSTWNVLHFSNTNSIASIPVGNPQIWLLFAIMDKRFGHQSSTTDISPDEEKVSD 163
           C++R LLS  NVLH+S TNSI S+PVGNPQ WLL+AI  +RFGHQ STT+ISPDEEKV D
Sbjct: 5   CKWR-LLSARNVLHYSYTNSITSVPVGNPQNWLLYAI--RRFGHQPSTTNISPDEEKVED 64

Query: 164 EVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKAYDMI 223
           EVLNQI ATRE AS CS ETFD+CIDKMCRS NL AAAQLLK  C+RKISLSS KAYDM+
Sbjct: 65  EVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDMV 124

Query: 224 LLAASESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMNF 283
           LLAASE GD TLLCQVFK  LVS K LSS SYMNFAK F RTDD SKLLEYVKEIIEM F
Sbjct: 125 LLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMTF 184

Query: 284 PNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETLHM 343
           PN +VINRIIFAFS+C+EIDKALQIFNQMKLLS RPDLYTYNIILD LGRAGRMDE LHM
Sbjct: 185 PNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHM 244

Query: 344 FVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESFGR 403
           FVSMK+DGIAPDIVSYNTLINSLRKVGRLD+CLIYFREMVAMRIEPDLLTYTALIESFGR
Sbjct: 245 FVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGR 304

Query: 404 SGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYLKLAGPQ 463
           SGN+EEALTLLREMKLK++ PSSYIYKSLISNSMKIGKVELAMNLLKEMKLSY KLAGP+
Sbjct: 305 SGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGPK 364

Query: 464 DFKRRK 470
           DFKR++
Sbjct: 365 DFKRKR 367

[Close]

BLAST of Lcy08g005630 vs. ExPASy TrEMBL
Match: A0A6J1D272 (pentatricopeptide repeat-containing protein At1g11900-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016680 PE=3 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 7.1e-153
Identity = 283/341 (82.99%), Postives = 306/341 (89.74%), Query Frame = 0


Query: 130 GNPQIWLLFAIMDKRFGHQSSTTDISPDEEKVSDEVLNQIIATREKASRCSRETFDVCID 189
           G+PQIWL FA M KRF HQS  TD SPDEEKV DEVLNQI+ATR+ ASR S ETFD CI 
Sbjct: 20  GDPQIWLFFANMGKRFSHQSYPTDTSPDEEKVIDEVLNQIVATRDNASRSSHETFDACIY 79

Query: 190 KMCRSGNLAAAAQLLKYLCERKISLSSPKAYDMILLAASESGDITLLCQVFKYCLVSCKS 249
           KMCRSGNLAAAAQLLK LC+ KISLS+ KAYDM+LLAASE GD +L CQVFK CLVSCKS
Sbjct: 80  KMCRSGNLAAAAQLLKSLCDGKISLSASKAYDMVLLAASERGDTSLFCQVFKDCLVSCKS 139

Query: 250 LSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMNFPNLIVINRIIFAFSKCKEIDKALQIF 309
           LSS +YMN AK F  T+D+ KLLEYVKE+IEM FPNLIVIN+IIFAFSKC+EI+KAL+IF
Sbjct: 140 LSSATYMNLAKAFISTNDVGKLLEYVKEVIEMTFPNLIVINKIIFAFSKCREIEKALRIF 199

Query: 310 NQMKLLSCRPDLYTYNIILDMLGRAGRMDETLHMFVSMKDDGIAPDIVSYNTLINSLRKV 369
           NQMKLLSC+PDLYTYNIILDMLGRAGRMDE LHMFVSMK+ GIAPDIVSYNTLINSLRKV
Sbjct: 200 NQMKLLSCKPDLYTYNIILDMLGRAGRMDEILHMFVSMKEAGIAPDIVSYNTLINSLRKV 259

Query: 370 GRLDLCLIYFREMVAMRIEPDLLTYTALIESFGRSGNIEEALTLLREMKLKNVYPSSYIY 429
           GRLD+CLIYFREMVAMRIEPDLLTYTA+IESFGRSGNIEEAL LLREMKLKNVYPS+YIY
Sbjct: 260 GRLDMCLIYFREMVAMRIEPDLLTYTAMIESFGRSGNIEEALGLLREMKLKNVYPSNYIY 319

Query: 430 KSLISNSMKIGKVELAMNLLKEMKLSYLKLAGPQDFKRRKR 471
           KSLISNSMKIGKVELAM+LL E+KLS   LA P+DFKRRKR
Sbjct: 320 KSLISNSMKIGKVELAMSLLNELKLSGSNLANPKDFKRRKR 360

[Close]

BLAST of Lcy08g005630 vs. ExPASy TrEMBL
Match: A0A1S3CIJ8 (pentatricopeptide repeat-containing protein At1g11900 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500823 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 2.7e-144
Identity = 275/357 (77.03%), Postives = 304/357 (85.15%), Query Frame = 0


Query: 114 NVLHFSNTNSIASIPVGNPQIWLLFAIMDKRFGHQSSTTDISPDEEKVSDEVLNQIIATR 173
           N+LH+S  N IASIPVGN QIW L+AI  K F HQSS+T+ISPDE KV DEVLNQIIA R
Sbjct: 11  NLLHYSYANRIASIPVGNSQIWPLYAI--KCFSHQSSSTNISPDEVKVGDEVLNQIIAPR 70

Query: 174 EKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKAYDMILLAASESGDI 233
           E AS CS E  D CIDK+C  G+LAAAAQLLK LC  KISL+S KAYDM+LLAASE GD 
Sbjct: 71  ENASNCSHEIVDACIDKICGLGHLAAAAQLLKSLCNEKISLNSSKAYDMVLLAASERGDT 130

Query: 234 TLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMNFPNLIVINRII 293
            LLCQVFK  +VSCKSLSS SYM+FA+ FT+T+D SKLLE VKEI+E+   N  VINRII
Sbjct: 131 PLLCQVFKVAVVSCKSLSSASYMSFARAFTKTNDSSKLLECVKEIVEVTSQNCSVINRII 190

Query: 294 FAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETLHMFVSMKDDGIA 353
           FAFSKC+EIDKA QIFNQMK LSC PDLYTYNI+LDMLGRAGR++E LH+FVSMKD+GIA
Sbjct: 191 FAFSKCREIDKAFQIFNQMKCLSCTPDLYTYNIVLDMLGRAGRVNEILHLFVSMKDEGIA 250

Query: 354 PDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESFGRSGNIEEALTL 413
           PDIVSYNTLINSLRKVGRLD+ LIYFREMVAM I+PDLLTYTALIESFGR GNIEEALTL
Sbjct: 251 PDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIKPDLLTYTALIESFGRFGNIEEALTL 310

Query: 414 LREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYLKLAGPQDFKRRKR 471
           L+EMKLK + PSSYIYKSLI+NS K+GKVELA NLL EMKLS  KLA P+DFKRRKR
Sbjct: 311 LKEMKLKKICPSSYIYKSLIANSKKMGKVELATNLLNEMKLSESKLARPEDFKRRKR 365

[Close]

BLAST of Lcy08g005630 vs. NCBI nr
Match: XP_022970322.1 (pentatricopeptide repeat-containing protein At1g11900 [Cucurbita maxima])

HSP 1 Score: 597.8 bits (1540), Expect = 8.0e-167
Identity = 312/362 (86.19%), Postives = 330/362 (91.16%), Query Frame = 0


Query: 108 NLLSTWNVLHFSNTNSIASIPVGNPQIWLLFAIMDKRFGHQSSTTDISPDEEKVSDEVLN 167
           +LLS  NVLH+S TNSI SIPVGNPQ WLL+AI  +RFGHQSST +ISPDEEKV DEVLN
Sbjct: 8   SLLSARNVLHYSYTNSITSIPVGNPQNWLLYAI--RRFGHQSSTNNISPDEEKVKDEVLN 67

Query: 168 QIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKAYDMILLAA 227
           QI ATRE ASRCS ETFDVCIDKMCRSGNL AAAQLLK LC+RKISLSS KAYDM+LLAA
Sbjct: 68  QITATRENASRCSHETFDVCIDKMCRSGNLTAAAQLLKSLCDRKISLSSSKAYDMVLLAA 127

Query: 228 SESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMNFPNLI 287
           SE GD TLLCQVFK  LVS K LSS SYMNFAK F RTDD SKLLEYVKEIIEM FPN +
Sbjct: 128 SERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMTFPNFL 187

Query: 288 VINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETLHMFVSM 347
           VINRIIFAFS+C+EIDKALQIFNQMKLLS RPDLYTYNIILD LGRAGRMDE LHMFVSM
Sbjct: 188 VINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHMFVSM 247

Query: 348 KDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESFGRSGNI 407
           K+DGIAPDIVSYNTLINSLRKVGRLD+CLIYFREMVAMRIEPDLLTYTALIESFGRSGN+
Sbjct: 248 KEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGRSGNV 307

Query: 408 EEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYLKLAGPQDFKR 467
           EEALTLLREMKLK++ PSSYIYKSLISNSMKIGKVELAMNLLKEMKLSY KLAGP+DFKR
Sbjct: 308 EEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGPKDFKR 367

Query: 468 RK 470
           ++
Sbjct: 368 KR 367

[Close]

BLAST of Lcy08g005630 vs. NCBI nr
Match: KAG6583593.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 594.0 bits (1530), Expect = 1.2e-165
Identity = 310/366 (84.70%), Postives = 331/366 (90.44%), Query Frame = 0


Query: 104 CRFRNLLSTWNVLHFSNTNSIASIPVGNPQIWLLFAIMDKRFGHQSSTTDISPDEEKVSD 163
           C++R LLS  NVLH+S TNSI S+PVGNPQ WLL+AI  +RFGHQ STT+ISPDEEKV D
Sbjct: 5   CKWR-LLSARNVLHYSYTNSITSVPVGNPQNWLLYAI--RRFGHQPSTTNISPDEEKVKD 64

Query: 164 EVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKAYDMI 223
           EVLNQI ATRE AS CS ETFD+CIDKMCRS NL AAAQLLK LC+RKISLSS KAYDM+
Sbjct: 65  EVLNQITATRENASMCSHETFDICIDKMCRSNNLTAAAQLLKSLCDRKISLSSSKAYDMV 124

Query: 224 LLAASESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMNF 283
           LLAASE GD TLLCQVFK  LVS K LSS SYMNFAK F RTDD SKLLEYVKEIIEM F
Sbjct: 125 LLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMTF 184

Query: 284 PNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETLHM 343
           PN +VINRIIFAFS+C+EIDKALQIFNQMKLLS RPDLYTYNIILD LGRAGRMDE LHM
Sbjct: 185 PNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHM 244

Query: 344 FVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESFGR 403
           FVSMK+DGIAPDIVSYNTLINSLRKVGRLD+CLIYFREMVAMRIEPDLLTYTALIESFGR
Sbjct: 245 FVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGR 304

Query: 404 SGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYLKLAGPQ 463
           SGN+EEALTLLREMKLK++ PSSYIYKSLISNSMKIGKVELAMNLLKEMKLSY KLAGP+
Sbjct: 305 SGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGPK 364

Query: 464 DFKRRK 470
           DFKR++
Sbjct: 365 DFKRKR 367

[Close]

BLAST of Lcy08g005630 vs. NCBI nr
Match: XP_022147838.1 (pentatricopeptide repeat-containing protein At1g11900-like isoform X1 [Momordica charantia])

HSP 1 Score: 593.6 bits (1529), Expect = 1.5e-165
Identity = 308/378 (81.48%), Postives = 333/378 (88.10%), Query Frame = 0


Query: 93  SMITMSSSGGSCRFRNLLSTWNVLHFSNTNSIASIPVGNPQIWLLFAIMDKRFGHQSSTT 152
           S I+  SSGGSCRFRNL ST  VLH+  TN IAS PVG+PQIWL FA M KRF HQS  T
Sbjct: 25  SYISDFSSGGSCRFRNLPSTRKVLHYPYTNCIASFPVGDPQIWLFFANMGKRFSHQSYPT 84

Query: 153 DISPDEEKVSDEVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKI 212
           D SPDEEKV DEVLNQI+ATR+ ASR S ETFD CI KMCRSGNLAAAAQLLK LC+ KI
Sbjct: 85  DTSPDEEKVIDEVLNQIVATRDNASRSSHETFDACIYKMCRSGNLAAAAQLLKSLCDGKI 144

Query: 213 SLSSPKAYDMILLAASESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLL 272
           SLS+ KAYDM+LLAASE GD +L CQVFK CLVSCKSLSS +YMN AK F  T+D+ KLL
Sbjct: 145 SLSASKAYDMVLLAASERGDTSLFCQVFKDCLVSCKSLSSATYMNLAKAFISTNDVGKLL 204

Query: 273 EYVKEIIEMNFPNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLG 332
           EYVKE+IEM FPNLIVIN+IIFAFSKC+EI+KAL+IFNQMKLLSC+PDLYTYNIILDMLG
Sbjct: 205 EYVKEVIEMTFPNLIVINKIIFAFSKCREIEKALRIFNQMKLLSCKPDLYTYNIILDMLG 264

Query: 333 RAGRMDETLHMFVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLL 392
           RAGRMDE LHMFVSMK+ GIAPDIVSYNTLINSLRKVGRLD+CLIYFREMVAMRIEPDLL
Sbjct: 265 RAGRMDEILHMFVSMKEAGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLL 324

Query: 393 TYTALIESFGRSGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEM 452
           TYTA+IESFGRSGNIEEAL LLREMKLKNVYPS+YIYKSLISNSMKIGKVELAM+LL E+
Sbjct: 325 TYTAMIESFGRSGNIEEALGLLREMKLKNVYPSNYIYKSLISNSMKIGKVELAMSLLNEL 384

Query: 453 KLSYLKLAGPQDFKRRKR 471
           KLS   LA P+DFKRRKR
Sbjct: 385 KLSGSNLANPKDFKRRKR 402

[Close]

BLAST of Lcy08g005630 vs. NCBI nr
Match: XP_022964991.1 (pentatricopeptide repeat-containing protein At1g11900-like [Cucurbita moschata])

HSP 1 Score: 591.3 bits (1523), Expect = 7.5e-165
Identity = 309/366 (84.43%), Postives = 330/366 (90.16%), Query Frame = 0


Query: 104 CRFRNLLSTWNVLHFSNTNSIASIPVGNPQIWLLFAIMDKRFGHQSSTTDISPDEEKVSD 163
           C++R LLS  NVLH+S TNSI S+PVGNPQ WLL+AI  +RFGHQ STT+ISPDEEKV D
Sbjct: 5   CKWR-LLSARNVLHYSYTNSITSVPVGNPQNWLLYAI--RRFGHQPSTTNISPDEEKVED 64

Query: 164 EVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKAYDMI 223
           EVLNQI ATRE AS CS ETFD+CIDKMCRS NL AAAQLLK  C+RKISLSS KAYDM+
Sbjct: 65  EVLNQITATRENASMCSHETFDICIDKMCRSDNLTAAAQLLKSSCDRKISLSSSKAYDMV 124

Query: 224 LLAASESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMNF 283
           LLAASE GD TLLCQVFK  LVS K LSS SYMNFAK F RTDD SKLLEYVKEIIEM F
Sbjct: 125 LLAASERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMTF 184

Query: 284 PNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETLHM 343
           PN +VINRIIFAFS+C+EIDKALQIFNQMKLLS RPDLYTYNIILD LGRAGRMDE LHM
Sbjct: 185 PNFLVINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHM 244

Query: 344 FVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESFGR 403
           FVSMK+DGIAPDIVSYNTLINSLRKVGRLD+CLIYFREMVAMRIEPDLLTYTALIESFGR
Sbjct: 245 FVSMKEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGR 304

Query: 404 SGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYLKLAGPQ 463
           SGN+EEALTLLREMKLK++ PSSYIYKSLISNSMKIGKVELAMNLLKEMKLSY KLAGP+
Sbjct: 305 SGNVEEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGPK 364

Query: 464 DFKRRK 470
           DFKR++
Sbjct: 365 DFKRKR 367

[Close]

BLAST of Lcy08g005630 vs. NCBI nr
Match: XP_023518970.1 (pentatricopeptide repeat-containing protein At1g11900 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 588.6 bits (1516), Expect = 4.9e-164
Identity = 308/362 (85.08%), Postives = 326/362 (90.06%), Query Frame = 0


Query: 108 NLLSTWNVLHFSNTNSIASIPVGNPQIWLLFAIMDKRFGHQSSTTDISPDEEKVSDEVLN 167
           +LLS  NVLH+S TNSI SIPVGNPQ WLL+AI  +RFGHQ STT+ISPDEEKV DEVLN
Sbjct: 8   SLLSARNVLHYSYTNSITSIPVGNPQNWLLYAI--RRFGHQPSTTNISPDEEKVKDEVLN 67

Query: 168 QIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKAYDMILLAA 227
           Q   TRE AS CS ETFDVCIDKMCRS NL AAAQLLK LC+RKISLSS KAYDM+LLAA
Sbjct: 68  QNTVTRENASMCSHETFDVCIDKMCRSDNLTAAAQLLKSLCDRKISLSSSKAYDMVLLAA 127

Query: 228 SESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMNFPNLI 287
           SE GD TLLCQVFK  LVS K LSS SYMNFAK F RTDD SKLLEYVKEIIEM FPN +
Sbjct: 128 SERGDTTLLCQVFKDSLVSRKPLSSTSYMNFAKAFARTDDSSKLLEYVKEIIEMTFPNFL 187

Query: 288 VINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETLHMFVSM 347
           VINRIIFAFS+C+EIDKALQIFNQMKLLS RPDLYTYNIILD LGRAGRMDE LHMFVSM
Sbjct: 188 VINRIIFAFSECREIDKALQIFNQMKLLSYRPDLYTYNIILDALGRAGRMDEILHMFVSM 247

Query: 348 KDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESFGRSGNI 407
           K+DGIAPDIVSYNTLINSLRKVGRLD+CLIYFREMVAMRIEPDLLTYTALIESFGRSGN+
Sbjct: 248 KEDGIAPDIVSYNTLINSLRKVGRLDMCLIYFREMVAMRIEPDLLTYTALIESFGRSGNV 307

Query: 408 EEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYLKLAGPQDFKR 467
           EEALTLLREMKLK++ PSSYIYKSLISNSMKIGKVELAMNLLKEMKLSY KLAGP+DFKR
Sbjct: 308 EEALTLLREMKLKHIRPSSYIYKSLISNSMKIGKVELAMNLLKEMKLSYSKLAGPKDFKR 367

Query: 468 RK 470
           ++
Sbjct: 368 KR 367

[Close]

BLAST of Lcy08g005630 vs. TAIR 10
Match: AT1G11900.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 241.1 bits (614), Expect = 1.8e-63
Identity = 140/318 (44.03%), Postives = 206/318 (64.78%), Query Frame = 0


Query: 159 EKVSDEVLNQIIATREKASR-CSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSP 218
           E+  +E+L +I+   E  S+  S+  +   ++K  R GNL+ A  LL+ L E+ I L   
Sbjct: 47  EEDEEELLKKIVNHSESGSKIISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPI- 106

Query: 219 KAYDMILLAASESGDITLLCQVFKYCLV--SCKSLSSNSYMNFAKPFTRTDDISKLLEYV 278
             +  +L AA E  D+ L C+VF+  L+    + LSS+ Y+N A+ F  TDD + L   +
Sbjct: 107 SVFKNLLAAAGELNDMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLL 166

Query: 279 KEIIEMNFP-NLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRA 338
           KEI E + P  LIV+NRIIFAF++ ++IDK L I  +MK   C+PD+ TYN +LD+LGRA
Sbjct: 167 KEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRA 226

Query: 339 GRMDETLHMFVSMKDD-GIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLT 398
           G ++E L +  +MK+D  ++ +I++YNT++N +RK  R D+CL+ + EMV   IEPDLL+
Sbjct: 227 GLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLS 286

Query: 399 YTALIESFGRSGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMK 458
           YTA+I+S GRSGN++E+L L  EMK + + PS Y+Y++LI    K G  + A+ L  E+K
Sbjct: 287 YTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 346

Query: 459 -LSYLKLAGPQDFKRRKR 471
             S L LAGPQDFKR  R
Sbjct: 347 NTSSLDLAGPQDFKRHLR 363

[Close]

BLAST of Lcy08g005630 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-27
Identity = 81/297 (27.27%), Postives = 147/297 (49.49%), Query Frame = 0


Query: 160 KVSDEVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKA 219
           K  D+ LN       K  R +  T+   I  +C  G  + A++LL  + ERKI+      
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN-PDVFT 329

Query: 220 YDMILLAASESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPF---TRTDDISKLLEYVK 279
           +  ++ A  + G +    +++   +      S  +Y +    F    R D+  ++ E++ 
Sbjct: 330 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM- 389

Query: 280 EIIEMNFPNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGR 339
            + +  FP+++  N +I  F K K +++ +++F +M       +  TYNI++  L +AG 
Sbjct: 390 -VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 449

Query: 340 MDETLHMFVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTA 399
            D    +F  M  DG+ P+I++YNTL++ L K G+L+  ++ F  +   ++EP + TY  
Sbjct: 450 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 509

Query: 400 LIESFGRSGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMK 454
           +IE   ++G +E+   L   + LK V P    Y ++IS   + G  E A  L KEMK
Sbjct: 510 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563

[Close]

BLAST of Lcy08g005630 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 4.6e-27
Identity = 78/292 (26.71%), Postives = 145/292 (49.66%), Query Frame = 0


Query: 163 DEVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKAYDM 222
           ++ LN       K  R +  T++  I  +C  G  + A++LL  + ERKI+  +   +  
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN-PNVVTFSA 331

Query: 223 ILLAASESGDITLLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMN 282
           ++ A  + G +    +++   +         +Y +    F   D + +     + +I  +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391

Query: 283 -FPNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETL 342
            FPN++  N +I  F K K +++ +++F +M       +  TYN ++  L +AG  D   
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 451

Query: 343 HMFVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESF 402
            +F  M  DG+ PDI++Y+ L++ L K G+L+  L+ F  +   ++EPD+ TY  +IE  
Sbjct: 452 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 511

Query: 403 GRSGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMK 454
            ++G +E+   L   + LK V P+  IY ++IS   + G  E A  L +EMK
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562

[Close]

BLAST of Lcy08g005630 vs. TAIR 10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 3.0e-26
Identity = 65/206 (31.55%), Postives = 115/206 (55.83%), Query Frame = 0


Query: 248 KSLSSNSYMNFAKPFTRTDDISKLLEYVKEIIEMNF-PNLIVINRIIFAFSKCKEIDKAL 307
           K+ S N  ++      +TDD+ +   + K++I     P +   N +I    K  +++ A 
Sbjct: 226 KTRSCNGLLHRFAKLGKTDDVKR---FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 285

Query: 308 QIFNQMKLLSCRPDLYTYNIILDMLGRAGRMDETLHMFVSMKDDGIAPDIVSYNTLINSL 367
            +F +MK     PD  TYN ++D  G+ GR+D+T+  F  MKD    PD+++YN LIN  
Sbjct: 286 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 345

Query: 368 RKVGRLDLCLIYFREMVAMRIEPDLLTYTALIESFGRSGNIEEALTLLREMKLKNVYPSS 427
            K G+L + L ++REM    ++P++++Y+ L+++F + G +++A+    +M+   + P+ 
Sbjct: 346 CKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 405

Query: 428 YIYKSLISNSMKIGKVELAMNLLKEM 453
           Y Y SLI  + KIG +  A  L  EM
Sbjct: 406 YTYTSLIDANCKIGNLSDAFRLGNEM 428

[Close]

BLAST of Lcy08g005630 vs. TAIR 10
Match: AT1G51965.1 (ABA Overly-Sensitive 5 )

HSP 1 Score: 115.9 bits (289), Expect = 8.6e-26
Identity = 79/299 (26.42%), Postives = 144/299 (48.16%), Query Frame = 0


Query: 160 KVSDEVLNQIIATREKASRCSRETFDVCIDKMCRSGNLAAAAQLLKYLCERKISLSSPKA 219
           K+ D+ +       E   R +  T+ + ++ +   G L      L  + E      +   
Sbjct: 319 KMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVR----LDGVVEISKRYMTQGI 378

Query: 220 YDMILLAASESGDIT----LLCQVFKYCLVSCKSLSSNSYMNFAKPFTRTDDISKLLEYV 279
           Y  ++   S+ G ++    L C ++ + +        +SYM+  +         + +E +
Sbjct: 379 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKG----ERDSYMSMLESLCGAGKTIEAIEML 438

Query: 280 KEIIEMN-FPNLIVINRIIFAFSKCKEIDKALQIFNQMKLLSCRPDLYTYNIILDMLGRA 339
            +I E     + ++ N +  A  K K+I     +F +MK     PD++TYNI++   GR 
Sbjct: 439 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 498

Query: 340 GRMDETLHMFVSMKDDGIAPDIVSYNTLINSLRKVGRLDLCLIYFREMVAMRIEPDLLTY 399
           G +DE +++F  ++     PDI+SYN+LIN L K G +D   + F+EM    + PD++TY
Sbjct: 499 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTY 558

Query: 400 TALIESFGRSGNIEEALTLLREMKLKNVYPSSYIYKSLISNSMKIGKVELAMNLLKEMK 454
           + L+E FG++  +E A +L  EM +K   P+   Y  L+    K G+   A++L  +MK
Sbjct: 559 STLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK 609

The following BLAST results are available for this feature:

BLAST of Lcy08g005630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5BIV3	2.5e-62	44.03	Pentatricopeptide repeat-containing protein At1g11900 OS=Arabidopsis thaliana OX...	[more]
Q9SXD1	3.8e-26	27.27	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop...	[more]
Q9LQ14	6.4e-26	26.71	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
P0C894	4.2e-25	31.55	Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th...	[more]
Q9ZU27	1.2e-24	26.42	Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidop...	[more]

BLAST of Lcy08g005630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYS7	3.9e-167	86.19	pentatricopeptide repeat-containing protein At1g11900 OS=Cucurbita maxima OX=366...	[more]
A0A6J1D2E8	7.3e-166	81.48	pentatricopeptide repeat-containing protein At1g11900-like isoform X1 OS=Momordi...	[more]
A0A6J1HKH0	3.6e-165	84.43	pentatricopeptide repeat-containing protein At1g11900-like OS=Cucurbita moschata...	[more]
A0A6J1D272	7.1e-153	82.99	pentatricopeptide repeat-containing protein At1g11900-like isoform X2 OS=Momordi...	[more]
A0A1S3CIJ8	2.7e-144	77.03	pentatricopeptide repeat-containing protein At1g11900 isoform X1 OS=Cucumis melo...	[more]

BLAST of Lcy08g005630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970322.1	8.0e-167	86.19	pentatricopeptide repeat-containing protein At1g11900 [Cucurbita maxima]	[more]
KAG6583593.1	1.2e-165	84.70	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022147838.1	1.5e-165	81.48	pentatricopeptide repeat-containing protein At1g11900-like isoform X1 [Momordica...	[more]
XP_022964991.1	7.5e-165	84.43	pentatricopeptide repeat-containing protein At1g11900-like [Cucurbita moschata]	[more]
XP_023518970.1	4.9e-164	85.08	pentatricopeptide repeat-containing protein At1g11900 [Cucurbita pepo subsp. pep...	[more]

BLAST of Lcy08g005630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11900.1	1.8e-63	44.03	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62670.1	2.7e-27	27.27	rna processing factor 2	[more]
AT1G62930.1	4.6e-27	26.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G02150.1	3.0e-26	31.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G51965.1	8.6e-26	26.42	ABA Overly-Sensitive 5	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 378..455 e-value: 6.8E-18 score: 66.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 181..376 e-value: 4.2E-31 score: 110.5
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 297..452 e-value: 8.1E-13 score: 48.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 322..356 e-value: 3.1E-9 score: 34.4 coord: 357..390 e-value: 1.9E-6 score: 25.7 coord: 393..425 e-value: 1.7E-8 score: 32.1 coord: 289..320 e-value: 2.6E-5 score: 22.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 355..389 score: 11.125777
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 285..319 score: 9.777537
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 390..424 score: 12.375365
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 320..354 score: 12.605553
None	No IPR available	PANTHER	PTHR47942:SF17	OS05G0481800 PROTEIN	coord: 114..470
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 114..470
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 255..450

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g005630.1	Lcy08g005630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding