Lcy08g005530 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCAGAAACTGGTGAGGAACAATTTACAAACTACAGTTCTTCTTCCATGAAACCTTTCTCAGATCATCCAACTCGTTCGGCTTCTAGCAAATTTTCTTCTTCTTCCAACCAGGCCGCCAAATATTCCGGCAATGGCTCCGGCTCGGTCGCCAAAAACGGCAGCGAGAGAGACAAATTCAAAAAGGCTGAAGAGTCGCTTCGGACCGTCATGTATTTGAGTTGTTGGGGCCCTAATTCATGA ATGGCTGCAGAAACTGGTGAGGAACAATTTACAAACTACAGTTCTTCTTCCATGAAACCTTTCTCAGATCATCCAACTCGTTCGGCTTCTAGCAAATTTTCTTCTTCTTCCAACCAGGCCGCCAAATATTCCGGCAATGGCTCCGGCTCGGTCGCCAAAAACGGCAGCGAGAGAGACAAATTCAAAAAGGCTGAAGAGTCGCTTCGGACCGTCATGTATTTGAGTTGTTGGGGCCCTAATTCATGA ATGGCTGCAGAAACTGGTGAGGAACAATTTACAAACTACAGTTCTTCTTCCATGAAACCTTTCTCAGATCATCCAACTCGTTCGGCTTCTAGCAAATTTTCTTCTTCTTCCAACCAGGCCGCCAAATATTCCGGCAATGGCTCCGGCTCGGTCGCCAAAAACGGCAGCGAGAGAGACAAATTCAAAAAGGCTGAAGAGTCGCTTCGGACCGTCATGTATTTGAGTTGTTGGGGCCCTAATTCATGA MAAETGEEQFTNYSSSSMKPFSDHPTRSASSKFSSSSNQAAKYSGNGSGSVAKNGSERDKFKKAEESLRTVMYLSCWGPNS Homology
BLAST of Lcy08g005530 vs. ExPASy TrEMBL
Match: A0A0A0K1Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046140 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07 Identity = 45/84 (53.57%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of Lcy08g005530 vs. ExPASy TrEMBL
Match: V4L136 (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10009208mg PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.5e-05 Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 0
BLAST of Lcy08g005530 vs. ExPASy TrEMBL
Match: A0A067JLI7 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21346 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.5e-05 Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of Lcy08g005530 vs. ExPASy TrEMBL
Match: U5FF96 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G117800 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.2e-04 Identity = 37/70 (52.86%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Lcy08g005530 vs. ExPASy TrEMBL
Match: A0A6P5WML0 (uncharacterized protein LOC111275776 OS=Durio zibethinus OX=66656 GN=LOC111275776 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.2e-04 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of Lcy08g005530 vs. NCBI nr
Match: KAG6572336.1 (hypothetical protein SDJN03_29064, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.0 bits (214), Expect = 7.9e-14 Identity = 56/89 (62.92%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of Lcy08g005530 vs. NCBI nr
Match: KGN43575.1 (hypothetical protein Csa_020190 [Cucumis sativus]) HSP 1 Score: 64.3 bits (155), Expect = 5.5e-07 Identity = 45/84 (53.57%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of Lcy08g005530 vs. NCBI nr
Match: XP_006415105.1 (uncharacterized protein LOC18991723 [Eutrema salsugineum] >ESQ33458.1 hypothetical protein EUTSA_v10009208mg [Eutrema salsugineum]) HSP 1 Score: 55.8 bits (133), Expect = 2.0e-04 Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 0
BLAST of Lcy08g005530 vs. NCBI nr
Match: KDP20875.1 (hypothetical protein JCGZ_21346 [Jatropha curcas]) HSP 1 Score: 55.8 bits (133), Expect = 2.0e-04 Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of Lcy08g005530 vs. NCBI nr
Match: PNS91614.1 (hypothetical protein POPTR_019G117800 [Populus trichocarpa]) HSP 1 Score: 55.5 bits (132), Expect = 2.6e-04 Identity = 37/70 (52.86%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Lcy08g005530 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein ) HSP 1 Score: 50.4 bits (119), Expect = 7.6e-07 Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 0
BLAST of Lcy08g005530 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein ) HSP 1 Score: 44.3 bits (103), Expect = 5.5e-05 Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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