Lcy08g005530 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g005530
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionEquilibrative nucleoside transporter 2-like
LocationChr08: 7079089 .. 7079334 (+)
RNA-Seq ExpressionLcy08g005530
SyntenyLcy08g005530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAGAAACTGGTGAGGAACAATTTACAAACTACAGTTCTTCTTCCATGAAACCTTTCTCAGATCATCCAACTCGTTCGGCTTCTAGCAAATTTTCTTCTTCTTCCAACCAGGCCGCCAAATATTCCGGCAATGGCTCCGGCTCGGTCGCCAAAAACGGCAGCGAGAGAGACAAATTCAAAAAGGCTGAAGAGTCGCTTCGGACCGTCATGTATTTGAGTTGTTGGGGCCCTAATTCATGA

mRNA sequence

ATGGCTGCAGAAACTGGTGAGGAACAATTTACAAACTACAGTTCTTCTTCCATGAAACCTTTCTCAGATCATCCAACTCGTTCGGCTTCTAGCAAATTTTCTTCTTCTTCCAACCAGGCCGCCAAATATTCCGGCAATGGCTCCGGCTCGGTCGCCAAAAACGGCAGCGAGAGAGACAAATTCAAAAAGGCTGAAGAGTCGCTTCGGACCGTCATGTATTTGAGTTGTTGGGGCCCTAATTCATGA

Coding sequence (CDS)

ATGGCTGCAGAAACTGGTGAGGAACAATTTACAAACTACAGTTCTTCTTCCATGAAACCTTTCTCAGATCATCCAACTCGTTCGGCTTCTAGCAAATTTTCTTCTTCTTCCAACCAGGCCGCCAAATATTCCGGCAATGGCTCCGGCTCGGTCGCCAAAAACGGCAGCGAGAGAGACAAATTCAAAAAGGCTGAAGAGTCGCTTCGGACCGTCATGTATTTGAGTTGTTGGGGCCCTAATTCATGA

Protein sequence

MAAETGEEQFTNYSSSSMKPFSDHPTRSASSKFSSSSNQAAKYSGNGSGSVAKNGSERDKFKKAEESLRTVMYLSCWGPNS
Homology
BLAST of Lcy08g005530 vs. ExPASy TrEMBL
Match: A0A0A0K1Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046140 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07
Identity = 45/84 (53.57%), Postives = 54/84 (64.29%), Query Frame = 0

Query: 1  MAAETGEEQFT---NYSSSSMKPFSDHPTRSASSKFSSSSNQAAKYSGNGSGSVAKNGSE 60
          MA E  ++Q+T   N +SS    FS +P  ++S   SSSS    K+S NGS S      E
Sbjct: 1  MAGE--QQQYTTNFNSNSSIKTNFSIYPNHTSSKSSSSSSKYPTKFSHNGSVS----QGE 60

Query: 61 RDKFKKAEESLRTVMYLSCWGPNS 82
          +DK KKAEESLRTVMYLSCWGPNS
Sbjct: 61 KDKIKKAEESLRTVMYLSCWGPNS 78

BLAST of Lcy08g005530 vs. ExPASy TrEMBL
Match: V4L136 (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10009208mg PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.5e-05
Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 0

Query: 36 SSNQAAKYSGNGSGSVAKNGSERDKFKKAEESLRTVMYLSCWGPN 81
          S++QA ++S + S +V  +G + +K K+AEESLRTVMYLSCWGPN
Sbjct: 46 SASQAKRFSSSSSSTVVASGKDVEKAKQAEESLRTVMYLSCWGPN 90

BLAST of Lcy08g005530 vs. ExPASy TrEMBL
Match: A0A067JLI7 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21346 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.5e-05
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0

Query: 27 RSASSKFSSSSNQAAKYSGNGSGSVAKNGSERDKFKKAEESLRTVMYLSCWGPN 81
          R ++   SSSS QA  +SG  S S A   ++ DK K+AEESLRTVMYLSCWGPN
Sbjct: 37 RDSTCASSSSSKQARLFSGAVSDSGAFKANKNDKLKQAEESLRTVMYLSCWGPN 90

BLAST of Lcy08g005530 vs. ExPASy TrEMBL
Match: U5FF96 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G117800 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-04
Identity = 37/70 (52.86%), Postives = 43/70 (61.43%), Query Frame = 0

Query: 14 SSSSMKPFSDHPTRSASSKFSSSSNQAAKYSGNGSGSVAKN---GSERDKFKKAEESLRT 73
          + SS+KP +D    SASSK      Q   +SGN S     N    SE +K K+AEESLRT
Sbjct: 28 NDSSVKPLNDAACTSASSK------QKTSFSGNFSSKDINNPAKNSEDNKRKQAEESLRT 87

Query: 74 VMYLSCWGPN 81
          VMYLSCWGPN
Sbjct: 88 VMYLSCWGPN 91

BLAST of Lcy08g005530 vs. ExPASy TrEMBL
Match: A0A6P5WML0 (uncharacterized protein LOC111275776 OS=Durio zibethinus OX=66656 GN=LOC111275776 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-04
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0

Query: 36 SSNQAAKYSGNGSGSVAKNGSERDKFKKAEESLRTVMYLSCWGPN 81
          SS+QA K S   S ++AK   E DK KK+EE+LRTVMYLSCWGPN
Sbjct: 45 SSSQAKKVSVPSSSALAKKLREDDKLKKSEEALRTVMYLSCWGPN 89

BLAST of Lcy08g005530 vs. NCBI nr
Match: KAG6572336.1 (hypothetical protein SDJN03_29064, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 87.0 bits (214), Expect = 7.9e-14
Identity = 56/89 (62.92%), Postives = 66/89 (74.16%), Query Frame = 0

Query: 1  MAAETGEEQFTNYSSSSMKPFSDHPTRSASSKFSS--SSNQAAKY------SGNGSGSVA 60
          MAAETGE+++TNYS       SDH T S+S+KFSS  SS QA  +      SG+GSGS A
Sbjct: 2  MAAETGEKRYTNYS-------SDHST-SSSAKFSSSASSKQAITFSRDGSGSGSGSGSGA 61

Query: 61 KNGSERDKFKKAEESLRTVMYLSCWGPNS 82
          K+G ERD+ +KAEESLRTVMYLSCWGPNS
Sbjct: 62 KHGGERDRLRKAEESLRTVMYLSCWGPNS 82

BLAST of Lcy08g005530 vs. NCBI nr
Match: KGN43575.1 (hypothetical protein Csa_020190 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 5.5e-07
Identity = 45/84 (53.57%), Postives = 54/84 (64.29%), Query Frame = 0

Query: 1  MAAETGEEQFT---NYSSSSMKPFSDHPTRSASSKFSSSSNQAAKYSGNGSGSVAKNGSE 60
          MA E  ++Q+T   N +SS    FS +P  ++S   SSSS    K+S NGS S      E
Sbjct: 1  MAGE--QQQYTTNFNSNSSIKTNFSIYPNHTSSKSSSSSSKYPTKFSHNGSVS----QGE 60

Query: 61 RDKFKKAEESLRTVMYLSCWGPNS 82
          +DK KKAEESLRTVMYLSCWGPNS
Sbjct: 61 KDKIKKAEESLRTVMYLSCWGPNS 78

BLAST of Lcy08g005530 vs. NCBI nr
Match: XP_006415105.1 (uncharacterized protein LOC18991723 [Eutrema salsugineum] >ESQ33458.1 hypothetical protein EUTSA_v10009208mg [Eutrema salsugineum])

HSP 1 Score: 55.8 bits (133), Expect = 2.0e-04
Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 0

Query: 36 SSNQAAKYSGNGSGSVAKNGSERDKFKKAEESLRTVMYLSCWGPN 81
          S++QA ++S + S +V  +G + +K K+AEESLRTVMYLSCWGPN
Sbjct: 46 SASQAKRFSSSSSSTVVASGKDVEKAKQAEESLRTVMYLSCWGPN 90

BLAST of Lcy08g005530 vs. NCBI nr
Match: KDP20875.1 (hypothetical protein JCGZ_21346 [Jatropha curcas])

HSP 1 Score: 55.8 bits (133), Expect = 2.0e-04
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0

Query: 27 RSASSKFSSSSNQAAKYSGNGSGSVAKNGSERDKFKKAEESLRTVMYLSCWGPN 81
          R ++   SSSS QA  +SG  S S A   ++ DK K+AEESLRTVMYLSCWGPN
Sbjct: 37 RDSTCASSSSSKQARLFSGAVSDSGAFKANKNDKLKQAEESLRTVMYLSCWGPN 90

BLAST of Lcy08g005530 vs. NCBI nr
Match: PNS91614.1 (hypothetical protein POPTR_019G117800 [Populus trichocarpa])

HSP 1 Score: 55.5 bits (132), Expect = 2.6e-04
Identity = 37/70 (52.86%), Postives = 43/70 (61.43%), Query Frame = 0

Query: 14 SSSSMKPFSDHPTRSASSKFSSSSNQAAKYSGNGSGSVAKN---GSERDKFKKAEESLRT 73
          + SS+KP +D    SASSK      Q   +SGN S     N    SE +K K+AEESLRT
Sbjct: 28 NDSSVKPLNDAACTSASSK------QKTSFSGNFSSKDINNPAKNSEDNKRKQAEESLRT 87

Query: 74 VMYLSCWGPN 81
          VMYLSCWGPN
Sbjct: 88 VMYLSCWGPN 91

BLAST of Lcy08g005530 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 50.4 bits (119), Expect = 7.6e-07
Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 0

Query: 36 SSNQAAKYSGNGSGSVAKNGSERDKFKKAEESLRTVMYLSCWGPN 81
          S +Q  ++S +   +   +  E +K KKAEESLRTVMYLSCWGPN
Sbjct: 46 SVSQGKRFSSSSVSAAVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

BLAST of Lcy08g005530 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 44.3 bits (103), Expect = 5.5e-05
Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 0

Query: 59 DKFKKAEESLRTVMYLSCWGPN 81
          +K K+AEESLRTVMYLSCWGP+
Sbjct: 62 NKTKQAEESLRTVMYLSCWGPS 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K1Q22.7e-0753.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046140 PE=4 SV=1[more]
V4L1369.5e-0557.78Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10009208mg PE=... [more]
A0A067JLI79.5e-0559.26Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21346 PE=4 SV=1[more]
U5FF961.2e-0452.86Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G117800 PE=4 ... [more]
A0A6P5WML01.2e-0464.44uncharacterized protein LOC111275776 OS=Durio zibethinus OX=66656 GN=LOC11127577... [more]
Match NameE-valueIdentityDescription
KAG6572336.17.9e-1462.92hypothetical protein SDJN03_29064, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN43575.15.5e-0753.57hypothetical protein Csa_020190 [Cucumis sativus][more]
XP_006415105.12.0e-0457.78uncharacterized protein LOC18991723 [Eutrema salsugineum] >ESQ33458.1 hypothetic... [more]
KDP20875.12.0e-0459.26hypothetical protein JCGZ_21346 [Jatropha curcas][more]
PNS91614.12.6e-0452.86hypothetical protein POPTR_019G117800 [Populus trichocarpa][more]
Match NameE-valueIdentityDescription
AT4G10270.17.6e-0753.33Wound-responsive family protein [more]
AT4G10265.15.5e-0581.82Wound-responsive family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 17..79
e-value: 4.3E-13
score: 50.1
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090DUF3774 DOMAIN PROTEIN-RELATEDcoord: 16..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..53
NoneNo IPR availablePANTHERPTHR33090:SF41WOUND-RESPONSIVE FAMILY PROTEINcoord: 16..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g005530.1Lcy08g005530.1mRNA