Lcy08g005280 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g005280
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Transcription factor bHLH117
Location	Chr08: 6836738 .. 6837928 (-)
RNA-Seq Expression	Lcy08g005280
Synteny	Lcy08g005280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGCTCTGCCGGAGACGATGCTTCCACCAATGTCTTGGATGATGTTTACTTCAACACCATGTTTTCCGGCGTCAGTCTCCAGTCGTTTCTCGCCGGTGCTAACCAGAGTCATCATCCATTCTTGCCGTCTCTGTTCGGAGGAGGCTACATTTCCGATGCTCTTACTTTCCCCGTCGCTACGACGTCGTTCTACCCTCACGCGAGCTCTAACTTCGTCGCTGAAAGTACGGACTCTTCCGATGCCTCCTTCCTCAAGTTGCCTAAGTCTGAGCCGATGAATGTGTACGGACAAACGGAGAGTGAAGAATCCACGTTTCTTGTTCATGATTCGACGTCGTTTCCTCACTTGCCGGATCTTCGTTCGTTGGAGCAATGCTCGTCGTCGTTTAACAAGCGTGCTCGAGTTGATTCTGTGTTGAATCCGGTGCAGATGGTGGAGCCGATGGTGCGAGGGTCTGAAGGTTTGCAGAACTTTCTTGTGCCGTACCAGTATAAACCCTCGCTGGATTTAACCGGTTCCGCGGCTGTGTCTCCTACTGTTCAAATTCCTCGCAGCGCTTTGGCTCGACAGCGTCGTCAGAAGTTGAGCGATAAGACGCGTTGCTTGCAGAAGCTACTGCCGTGGGACAAAAAGATGGATATCGCTACAATGCTCGAGGAAGCGTGTAAGTACGTCAAGTTTCTGCAGGCTCAACTCCTCGCGCTTCAATCCATGCCCTGTGAATCGGCCATTTCTACAAATTCGAATCATTACATTAGCGGTGTGTTTGGTGGATTGGAGAGGCTGAACAGAAACCAACTGTTGCAAGTTTTGGTTAACTCGCCGGTGGCTCAGACGATGCTTTGTTCGCAGAGTTGTTGCGTTTTCTCGGCGGAACAGTTGGGGATTATCCAGAAGATCGCAGAGAAAAGAGTTCTGCTGCAGCAAATGTCGGCGTTCCATCACAAACCCTAGGTTTCCGATCAAGTTCCGCCGTTGTTGGTTCAGCAAGGCGGCGCGTCCGGTACTACAATTTTATATCTCTTTATGTGTTTGCTTTTTTTTAGGTCATTACAAAGCATGATAGAATATCCATTCCCCTCTTTTTTGCTTTTTGGGAATCGTTTTTGTAGTCACAAATTGGAATGTTGGAAAATGCTTTTAGCTGAAAGTACAAAATATCAGCTACCTTAGTCATAGTGATTC

mRNA sequence

ATGGAGAGCTCTGCCGGAGACGATGCTTCCACCAATGTCTTGGATGATGTTTACTTCAACACCATGTTTTCCGGCGTCAGTCTCCAGTCGTTTCTCGCCGGTGCTAACCAGAGTCATCATCCATTCTTGCCGTCTCTGTTCGGAGGAGGCTACATTTCCGATGCTCTTACTTTCCCCGTCGCTACGACGTCGTTCTACCCTCACGCGAGCTCTAACTTCGTCGCTGAAAGTACGGACTCTTCCGATGCCTCCTTCCTCAAGTTGCCTAAGTCTGAGCCGATGAATGTGTACGGACAAACGGAGAGTGAAGAATCCACGTTTCTTGTTCATGATTCGACGTCGTTTCCTCACTTGCCGGATCTTCGTTCGTTGGAGCAATGCTCGTCGTCGTTTAACAAGCGTGCTCGAGTTGATTCTGTGTTGAATCCGGTGCAGATGGTGGAGCCGATGGTGCGAGGGTCTGAAGGTTTGCAGAACTTTCTTGTGCCGTACCAGTATAAACCCTCGCTGGATTTAACCGGTTCCGCGGCTGTGTCTCCTACTGTTCAAATTCCTCGCAGCGCTTTGGCTCGACAGCGTCGTCAGAAGTTGAGCGATAAGACGCGTTGCTTGCAGAAGCTACTGCCGTGGGACAAAAAGATGGATATCGCTACAATGCTCGAGGAAGCGTGTAAGTACGTCAAGTTTCTGCAGGCTCAACTCCTCGCGCTTCAATCCATGCCCTGTGAATCGGCCATTTCTACAAATTCGAATCATTACATTAGCGGTGTGTTTGGTGGATTGGAGAGGCTGAACAGAAACCAACTGTTGCAAGTTTTGGTTAACTCGCCGGTGGCTCAGACGATGCTTTGTTCGCAGAGTTGTTGCGTTTTCTCGGCGGAACAGTTGGGGATTATCCAGAAGATCGCAGAGAAAAGAGTTCTGCTGCAGCAAATGTCGGCGTTCCATCACAAACCCTAGGTTTCCGATCAAGTTCCGCCGTTGTTGGTTCAGCAAGGCGGCGCGTCCGGTACTACAATTTTATATCTCTTTATGTGTTTGCTTTTTTTTAGGTCATTACAAAGCATGATAGAATATCCATTCCCCTCTTTTTTGCTTTTTGGGAATCGTTTTTGTAGTCACAAATTGGAATGTTGGAAAATGCTTTTAGCTGAAAGTACAAAATATCAGCTACCTTAGTCATAGTGATTC

Coding sequence (CDS)

ATGGAGAGCTCTGCCGGAGACGATGCTTCCACCAATGTCTTGGATGATGTTTACTTCAACACCATGTTTTCCGGCGTCAGTCTCCAGTCGTTTCTCGCCGGTGCTAACCAGAGTCATCATCCATTCTTGCCGTCTCTGTTCGGAGGAGGCTACATTTCCGATGCTCTTACTTTCCCCGTCGCTACGACGTCGTTCTACCCTCACGCGAGCTCTAACTTCGTCGCTGAAAGTACGGACTCTTCCGATGCCTCCTTCCTCAAGTTGCCTAAGTCTGAGCCGATGAATGTGTACGGACAAACGGAGAGTGAAGAATCCACGTTTCTTGTTCATGATTCGACGTCGTTTCCTCACTTGCCGGATCTTCGTTCGTTGGAGCAATGCTCGTCGTCGTTTAACAAGCGTGCTCGAGTTGATTCTGTGTTGAATCCGGTGCAGATGGTGGAGCCGATGGTGCGAGGGTCTGAAGGTTTGCAGAACTTTCTTGTGCCGTACCAGTATAAACCCTCGCTGGATTTAACCGGTTCCGCGGCTGTGTCTCCTACTGTTCAAATTCCTCGCAGCGCTTTGGCTCGACAGCGTCGTCAGAAGTTGAGCGATAAGACGCGTTGCTTGCAGAAGCTACTGCCGTGGGACAAAAAGATGGATATCGCTACAATGCTCGAGGAAGCGTGTAAGTACGTCAAGTTTCTGCAGGCTCAACTCCTCGCGCTTCAATCCATGCCCTGTGAATCGGCCATTTCTACAAATTCGAATCATTACATTAGCGGTGTGTTTGGTGGATTGGAGAGGCTGAACAGAAACCAACTGTTGCAAGTTTTGGTTAACTCGCCGGTGGCTCAGACGATGCTTTGTTCGCAGAGTTGTTGCGTTTTCTCGGCGGAACAGTTGGGGATTATCCAGAAGATCGCAGAGAAAAGAGTTCTGCTGCAGCAAATGTCGGCGTTCCATCACAAACCCTAG

Protein sequence

MESSAGDDASTNVLDDVYFNTMFSGVSLQSFLAGANQSHHPFLPSLFGGGYISDALTFPVATTSFYPHASSNFVAESTDSSDASFLKLPKSEPMNVYGQTESEESTFLVHDSTSFPHLPDLRSLEQCSSSFNKRARVDSVLNPVQMVEPMVRGSEGLQNFLVPYQYKPSLDLTGSAAVSPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSMPCESAISTNSNHYISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGIIQKIAEKRVLLQQMSAFHHKP

Homology

[Close]

BLAST of Lcy08g005280 vs. ExPASy Swiss-Prot
Match: Q9LRJ4 (Transcription factor bHLH117 OS=Arabidopsis thaliana OX=3702 GN=BHLH117 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 3.6e-20
Identity = 69/186 (37.10%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 112 STSFPHLPDLRSLEQCSSSFNKRARVDSVLNPVQM-VEPMVRGSEGLQNFLVPYQYKPSL 171
           +T F HLPDL+S             +D+V  P  M + P +          +P   +  L
Sbjct: 80  TTPFLHLPDLKS-------------IDAVEEPTTMKLFPSLSPP-------LPAAKRQKL 139

Query: 172 DLTGSAAVSPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFL 231
           + T S+  S +           +R+K+SDK R L+KL+PW++KM++A  LEE+ KY+KFL
Sbjct: 140 NSTSSSTTSGSPTASNDGGIITKRRKISDKIRSLEKLMPWERKMNLAMTLEESHKYIKFL 199

Query: 232 QAQLLALQSMPCESAISTNSNHYISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCV 291
           Q+Q+ +L+ MP ES  +T       G    L+ L R Q+LQVL NSP ++ +L S+  CV
Sbjct: 200 QSQIASLRWMPLESVYNTAGE---VGETDLLKSLTRQQILQVLANSPGSRNVLSSRGVCV 242

Query: 292 FSAEQL 297
           FS EQL
Sbjct: 260 FSYEQL 242

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BLAST of Lcy08g005280 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.3e-08
Identity = 29/56 (51.79%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 185 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 241
           P++  ARQRR+++S+K R LQ L+P   KMD A+ML+EA  Y+KFL+AQ+ AL+++
Sbjct: 279 PQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENL 334

[Close]

BLAST of Lcy08g005280 vs. ExPASy Swiss-Prot
Match: A0A0P0WQ90 (Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=LF PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-07
Identity = 28/56 (50.00%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 185 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 241
           P++  AR RR+++S++ R LQ+L+P   KMD ATML+EA  Y+KFL++QL AL+++
Sbjct: 307 PQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALETL 362

[Close]

BLAST of Lcy08g005280 vs. ExPASy Swiss-Prot
Match: Q8LEG1 (Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.7e-07
Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 177 AVSPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLA 236
           A   T   P+S  AR+RR+K++++ + LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  
Sbjct: 169 ATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKL 228

Query: 237 LQS 240
           L S
Sbjct: 229 LSS 231

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BLAST of Lcy08g005280 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.5e-07
Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 169 SLDLTGSAAVS-PTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYV 228
           +L+L G    S      P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA +YV
Sbjct: 230 ALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYV 289

Query: 229 KFLQAQLLALQS 240
           KFLQ Q+  L S
Sbjct: 290 KFLQLQIKLLSS 301

[Close]

BLAST of Lcy08g005280 vs. ExPASy TrEMBL
Match: A0A5A7TAD0 (Transcription factor bHLH117 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003960 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.7e-129
Identity = 254/323 (78.64%), Postives = 270/323 (83.59%), Query Frame = 0


Query: 1   MESSAGDDASTNVLDDVYFNTMFSGVSLQSFLAGANQSHHPFLPSLFGGGYISDALTFPV 60
           MESS GDDAS++V DD  FN MFS VS QSFLA  N S        FGGGYI+DALTFP 
Sbjct: 1   MESSPGDDASSSVWDDACFNAMFSDVSFQSFLAAGNHSQ-------FGGGYIADALTFPD 60

Query: 61  ATTSFYPHASSNFVAESTDSSDASFLKLPKSEPMNVYGQTESEESTFLVHDSTSFPHLPD 120
           ATTSFYP  S+NF AE TDSSD  F KLPKSEPM+VY  TE++E  F++HDSTSFPHLPD
Sbjct: 61  ATTSFYPQPSTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLPD 120

Query: 121 LRSLEQCSSSFNKRARVDSVLNPVQMVEPMVRGSEGLQNFLVPY-QYKPSLDL-TGSAAV 180
           LRSLEQCSSSFNKRARVDS+ NP+QMVEPMVRG EG QNF VPY QYK S DL T SA  
Sbjct: 121 LRSLEQCSSSFNKRARVDSMSNPLQMVEPMVRGCEGFQNFFVPYGQYKTSSDLITTSATA 180

Query: 181 SPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 240
           SPTVQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ
Sbjct: 181 SPTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 240

Query: 241 SMPCESAIST--NSNHYISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 300
           SMPCESA+S+  +SN YI+GVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL
Sbjct: 241 SMPCESALSSYNSSNPYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 300

Query: 301 GIIQKIAEKRVLLQQMSAFHHKP 320
           G+IQKIAEKRVL      FH KP
Sbjct: 301 GLIQKIAEKRVL----PTFHPKP 312

[Close]

BLAST of Lcy08g005280 vs. ExPASy TrEMBL
Match: A0A1S3C0Y6 (transcription factor bHLH117 OS=Cucumis melo OX=3656 GN=LOC103495566 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 4.1e-128
Identity = 253/323 (78.33%), Postives = 269/323 (83.28%), Query Frame = 0


Query: 1   MESSAGDDASTNVLDDVYFNTMFSGVSLQSFLAGANQSHHPFLPSLFGGGYISDALTFPV 60
           MESS GDDAS++V DD  FN MFS VS QSFLA  N S        FGGGYI+DALTFP 
Sbjct: 1   MESSPGDDASSSVWDDACFNAMFSDVSFQSFLAAGNHSQ-------FGGGYIADALTFPD 60

Query: 61  ATTSFYPHASSNFVAESTDSSDASFLKLPKSEPMNVYGQTESEESTFLVHDSTSFPHLPD 120
           ATTSFYP  S+NF AE TDSSD  F KLPKSEPM+VY  TE++E  F++HDSTSFPHLPD
Sbjct: 61  ATTSFYPQPSTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLPD 120

Query: 121 LRSLEQCSSSFNKRARVDSVLNPVQMVEPMVRGSEGLQNFLVPY-QYKPSLDL-TGSAAV 180
           LRSLEQ SSSFNKRARVDS+ NP+QMVEPMVRG EG QNF VPY QYK S DL T SA  
Sbjct: 121 LRSLEQRSSSFNKRARVDSMSNPLQMVEPMVRGCEGFQNFFVPYGQYKTSSDLITTSATA 180

Query: 181 SPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 240
           SPTVQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ
Sbjct: 181 SPTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 240

Query: 241 SMPCESAIST--NSNHYISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 300
           SMPCESA+S+  +SN YI+GVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL
Sbjct: 241 SMPCESALSSYNSSNPYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 300

Query: 301 GIIQKIAEKRVLLQQMSAFHHKP 320
           G+IQKIAEKRVL      FH KP
Sbjct: 301 GLIQKIAEKRVL----PTFHPKP 312

[Close]

BLAST of Lcy08g005280 vs. ExPASy TrEMBL
Match: A0A0A0K6W7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044910 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 3.5e-127
Identity = 249/323 (77.09%), Postives = 269/323 (83.28%), Query Frame = 0


Query: 1   MESSAGDDASTNVL-DDVYFNTMFSGVSLQSFLAGANQSHHPFLPSLFGGGYISDALTFP 60
           ME+S GDDAS++V  DD  FN MFS VS QSFLA  N S        FGGGYI+DALTFP
Sbjct: 1   METSPGDDASSSVWDDDACFNAMFSDVSFQSFLAAGNHSQ-------FGGGYIADALTFP 60

Query: 61  VATTSFYPHASSNFVAESTDSSDASFLKLPKSEPMNVYGQTESEESTFLVHDSTSFPHLP 120
             TTSFYP  ++NF AE TDSSD  F KLPKSEPM+VY  TE++E  F++HDSTSFPHLP
Sbjct: 61  NPTTSFYPQPTTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLP 120

Query: 121 DLRSLEQCSSSFNKRARVDSVLNPVQMVEPMVRGSEGLQNFLVPYQYKPSLDL-TGSAAV 180
           DLRSLEQCSSS NKRARVDS+ NP+QM+EPMVRG EG Q+F VPYQYK S DL T SA  
Sbjct: 121 DLRSLEQCSSSLNKRARVDSMSNPLQMMEPMVRGCEGFQSFFVPYQYKISSDLITASATA 180

Query: 181 SPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 240
           SPTVQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ
Sbjct: 181 SPTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 240

Query: 241 SMPCESAIST--NSNHYISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 300
           SMPCESAIS+  +SN+YI+GVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL
Sbjct: 241 SMPCESAISSYNSSNNYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 300

Query: 301 GIIQKIAEKRVLLQQMSAFHHKP 320
           G+IQKIAEKRVL      FH KP
Sbjct: 301 GLIQKIAEKRVL----PTFHPKP 312

[Close]

BLAST of Lcy08g005280 vs. ExPASy TrEMBL
Match: A0A6J1EXY4 (transcription factor bHLH117-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437213 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 7.5e-122
Identity = 246/320 (76.88%), Postives = 262/320 (81.88%), Query Frame = 0


Query: 1   MESSAGDDASTNVLDDVYFNTMFSGVSLQSFLAGANQSHHP-FLPSLFGGGYISDALTFP 60
           +ESSAGDD STNV DD  FN MFSGVSLQSFLAG NQ+H P  LPSLFGGGYISDALTFP
Sbjct: 3   VESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALTFP 62

Query: 61  VATTSFYPHASSNFVAESTDSSDASFLKLPKSEPMNVYGQTESEESTFLVHDSTSFPHLP 120
            A+TS YP  SSNFVAES +S          SEPMNVY     E++ F+ H STSFPHLP
Sbjct: 63  DASTSLYPQPSSNFVAESIES----------SEPMNVY-----EQTAFVFHASTSFPHLP 122

Query: 121 DLRSLEQCSSSFNKRARVDSVLNPVQMVEPMVRGSEGLQNFLVPYQYKPSLDLTGSAAVS 180
           DLRSL QCSSSFNKRARVDSV NP+QMVEPM+R  E                ++ SAAVS
Sbjct: 123 DLRSLGQCSSSFNKRARVDSVWNPLQMVEPMMRECE----------------VSSSAAVS 182

Query: 181 PTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQS 240
            TVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDI+TMLE A KYVKFLQAQLLALQS
Sbjct: 183 RTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLALQS 242

Query: 241 MPCESAISTNSNHYISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGII 300
           MPCESAISTNSNH+ISGVFGGLERL+RNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG+I
Sbjct: 243 MPCESAISTNSNHHISGVFGGLERLSRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGLI 291

Query: 301 QKIAEKRVLLQQMSAFHHKP 320
           QKIAEKRVLLQQ+S F HKP
Sbjct: 303 QKIAEKRVLLQQISTFRHKP 291

[Close]

BLAST of Lcy08g005280 vs. ExPASy TrEMBL
Match: A0A6J1C4H2 (transcription factor bHLH117 OS=Momordica charantia OX=3673 GN=LOC111007840 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 6.3e-121
Identity = 253/343 (73.76%), Postives = 270/343 (78.72%), Query Frame = 0


Query: 1   MESSAGDDAST-----------NVLDDVYFNTMFSGVSLQSFLAGANQSHHPFLPSLFGG 60
           MESSAGDD S             V DD  FN MFSGVSLQSFL  A   +HPFLPSLF G
Sbjct: 1   MESSAGDDFSARVHFPAKTVCEEVWDDACFNAMFSGVSLQSFL--AVNHNHPFLPSLF-G 60

Query: 61  GYISDALTFPVATTSFYPHASSNFVAESTDSSDASFLKLPKSEPMNVYGQTESEESTFLV 120
           GY++DA++ P  +TS YP ASSNFV+EST SSDA F KLPK+EPMN   +TE  ES F+ 
Sbjct: 61  GYVADAISLP-DSTSLYPPASSNFVSESTASSDA-FFKLPKTEPMNNVYETEETESVFVF 120

Query: 121 HDSTSFPHLPDLRSLEQ---------CSSSFNKRARVDSVLNPVQMVEPMVRGSEGLQNF 180
           HDSTSFPHLPDLRSLEQ          SSSFNKRARVDS LNP+Q +EPMVRG E  QNF
Sbjct: 121 HDSTSFPHLPDLRSLEQSSSSSLSPLMSSSFNKRARVDSGLNPLQTLEPMVRGCESFQNF 180

Query: 181 LVPYQYKPSLDLTGSAAVSPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATML 240
           L+PYQYKP  D T SAAV+P VQ PRSALARQRRQKLSD+TRCLQKLLPWDKKMDIATML
Sbjct: 181 LLPYQYKPLPDFTTSAAVAPAVQFPRSALARQRRQKLSDRTRCLQKLLPWDKKMDIATML 240

Query: 241 EEACKYVKFLQAQLLALQSMPCESAISTNSNHY----ISGVFGGLERLNRNQLLQVLVNS 300
           EEA KYVKFLQAQLLALQSMPCESAIST SN+Y     SG FGGLERLNRNQLLQVLVNS
Sbjct: 241 EEAYKYVKFLQAQLLALQSMPCESAISTGSNNYNSVSNSGAFGGLERLNRNQLLQVLVNS 300

Query: 301 PVAQTMLCSQSCCVFSAEQLGIIQKIAEKRVLLQQMSAFHHKP 320
           PVAQTMLCSQS CVFSAEQLG+IQKIAEKR LLQQMS F  KP
Sbjct: 301 PVAQTMLCSQSFCVFSAEQLGLIQKIAEKRALLQQMSTFLPKP 338

[Close]

BLAST of Lcy08g005280 vs. NCBI nr
Match: XP_038889062.1 (transcription factor bHLH117 [Benincasa hispida])

HSP 1 Score: 515.4 bits (1326), Expect = 3.5e-142
Identity = 274/322 (85.09%), Postives = 286/322 (88.82%), Query Frame = 0


Query: 1   MESSAGDDASTNVLDDVYFNTMFSGVSLQSFLAGANQSHHPFLPSLFGGGYISDALTFPV 60
           MESSAGDDAS+ V DD  FN MFSGVSLQSFLAG +QS H FLPSLFGGGY +DAL FP 
Sbjct: 1   MESSAGDDASSTVWDDTCFNAMFSGVSLQSFLAGGSQS-HTFLPSLFGGGYTADALAFPD 60

Query: 61  ATTSFYPHASSNFVAESTDSSDASFLKLPKSEPMNVYGQTESEESTFLVHDSTSFPHLPD 120
            TTSFYP  SSNFVAE T SSD  FLKLPKSEPMNVYG TE+EE+ F +HDS SFPHLPD
Sbjct: 61  GTTSFYPQPSSNFVAECTASSDGYFLKLPKSEPMNVYGNTETEETAFGLHDSMSFPHLPD 120

Query: 121 LRSLEQCSSSFNKRARVD-SVLNPVQMVEPMVRGSEGLQNFLVPYQYKPSLDL-TGSAAV 180
           LRSLEQCSSSFNKRARVD S+LNP QMVEPMVRG EG Q F +PYQYKPS DL T SA V
Sbjct: 121 LRSLEQCSSSFNKRARVDYSMLNPSQMVEPMVRGCEGFQKFFMPYQYKPSSDLITTSATV 180

Query: 181 SPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 240
           SPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQL+ALQ
Sbjct: 181 SPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLVALQ 240

Query: 241 SMPCESAIST-NSNHYISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG 300
           SMPCESAIST +SNHYI+GVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG
Sbjct: 241 SMPCESAISTYSSNHYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG 300

Query: 301 IIQKIAEKRVLLQQMSAFHHKP 320
           +IQKIAEKRVLLQQMS F  KP
Sbjct: 301 LIQKIAEKRVLLQQMSTFRPKP 321

[Close]

BLAST of Lcy08g005280 vs. NCBI nr
Match: XP_023554551.1 (transcription factor bHLH117-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 505.4 bits (1300), Expect = 3.7e-139
Identity = 265/320 (82.81%), Postives = 285/320 (89.06%), Query Frame = 0


Query: 1   MESSAGDDASTNVLDDVYFNTMFSGVSLQSFLAGANQSHHPFLPSLFGGGYISDALTFPV 60
           ME+SAGDDAS+ V DD  F+ MFSGVSLQSFLAG +QS H  LPSLFGG Y++D+LTFP 
Sbjct: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQS-HTLLPSLFGGCYVADSLTFPD 60

Query: 61  ATTSFYPHASSNFVAESTDSSDASFLKLPKSEPMNVYGQTESEESTFLVHDSTSFPHLPD 120
             TS YP  SSNFVAEST SSD  F KLPKSEPM+VY QTE++ES+FL HDSTSFPHLPD
Sbjct: 61  GMTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESSFLFHDSTSFPHLPD 120

Query: 121 LRSLEQCSSSFNKRARVDSVLNPVQMVEPMVRGSEGLQNFLVPYQYKPSLDLTGSAAVSP 180
           LRSLEQCSSSFNKRARVDSV+NP+QMVEPMVR  EG QNF VPY+YK S DLT SAAVSP
Sbjct: 121 LRSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKLSPDLTTSAAVSP 180

Query: 181 TVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 240
            VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM
Sbjct: 181 AVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 240

Query: 241 PCESAIST-NSNHYISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGII 300
           P ESAIS+ ++NHYI+G+FGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLG+I
Sbjct: 241 PRESAISSYSNNHYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGLI 300

Query: 301 QKIAEKRVLLQQMSAFHHKP 320
           QKIAEKRVLLQQMS F  KP
Sbjct: 301 QKIAEKRVLLQQMSTFRPKP 319

[Close]

BLAST of Lcy08g005280 vs. NCBI nr
Match: KAG6572315.1 (Transcription factor basic helix-loop-helix 117, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 503.1 bits (1294), Expect = 1.8e-138
Identity = 265/320 (82.81%), Postives = 283/320 (88.44%), Query Frame = 0


Query: 1   MESSAGDDASTNVLDDVYFNTMFSGVSLQSFLAGANQSHHPFLPSLFGGGYISDALTFPV 60
           ME+SAGDDAS+ V DD  F+ MFSGVSLQSFLAG +QS H  LPSLFGG Y++D+LTFP 
Sbjct: 1   METSAGDDASSTVWDDACFDAMFSGVSLQSFLAGGSQS-HTLLPSLFGGCYVADSLTFPD 60

Query: 61  ATTSFYPHASSNFVAESTDSSDASFLKLPKSEPMNVYGQTESEESTFLVHDSTSFPHLPD 120
             TS YP  SSNFVAEST SSD  F KLPKSEPM+VY QTE++ESTFL HDSTSFPHLPD
Sbjct: 61  GMTSLYPQVSSNFVAESTASSDGPFFKLPKSEPMSVYEQTETQESTFLFHDSTSFPHLPD 120

Query: 121 LRSLEQCSSSFNKRARVDSVLNPVQMVEPMVRGSEGLQNFLVPYQYKPSLDLTGSAAVSP 180
           LRSLEQCSSSFNKRARVDSV+NP+QMVEPMVR  EG QNF VPY+YK S DLT SAAVSP
Sbjct: 121 LRSLEQCSSSFNKRARVDSVMNPLQMVEPMVRTCEGFQNFFVPYEYKHSPDLTTSAAVSP 180

Query: 181 TVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 240
            VQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM
Sbjct: 181 AVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 240

Query: 241 PCESAISTNSNH-YISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGII 300
           P ESAIS+ SN+ YI+G+FGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ G+I
Sbjct: 241 PRESAISSYSNNQYITGMFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQFGLI 300

Query: 301 QKIAEKRVLLQQMSAFHHKP 320
           QKIAEKRVLLQQMS F  KP
Sbjct: 301 QKIAEKRVLLQQMSTFRPKP 319

[Close]

BLAST of Lcy08g005280 vs. NCBI nr
Match: KAA0040270.1 (transcription factor bHLH117 [Cucumis melo var. makuwa] >TYK07078.1 transcription factor bHLH117 [Cucumis melo var. makuwa])

HSP 1 Score: 472.2 bits (1214), Expect = 3.4e-129
Identity = 254/323 (78.64%), Postives = 270/323 (83.59%), Query Frame = 0


Query: 1   MESSAGDDASTNVLDDVYFNTMFSGVSLQSFLAGANQSHHPFLPSLFGGGYISDALTFPV 60
           MESS GDDAS++V DD  FN MFS VS QSFLA  N S        FGGGYI+DALTFP 
Sbjct: 1   MESSPGDDASSSVWDDACFNAMFSDVSFQSFLAAGNHSQ-------FGGGYIADALTFPD 60

Query: 61  ATTSFYPHASSNFVAESTDSSDASFLKLPKSEPMNVYGQTESEESTFLVHDSTSFPHLPD 120
           ATTSFYP  S+NF AE TDSSD  F KLPKSEPM+VY  TE++E  F++HDSTSFPHLPD
Sbjct: 61  ATTSFYPQPSTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLPD 120

Query: 121 LRSLEQCSSSFNKRARVDSVLNPVQMVEPMVRGSEGLQNFLVPY-QYKPSLDL-TGSAAV 180
           LRSLEQCSSSFNKRARVDS+ NP+QMVEPMVRG EG QNF VPY QYK S DL T SA  
Sbjct: 121 LRSLEQCSSSFNKRARVDSMSNPLQMVEPMVRGCEGFQNFFVPYGQYKTSSDLITTSATA 180

Query: 181 SPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 240
           SPTVQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ
Sbjct: 181 SPTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 240

Query: 241 SMPCESAIST--NSNHYISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 300
           SMPCESA+S+  +SN YI+GVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL
Sbjct: 241 SMPCESALSSYNSSNPYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 300

Query: 301 GIIQKIAEKRVLLQQMSAFHHKP 320
           G+IQKIAEKRVL      FH KP
Sbjct: 301 GLIQKIAEKRVL----PTFHPKP 312

[Close]

BLAST of Lcy08g005280 vs. NCBI nr
Match: XP_008455394.1 (PREDICTED: transcription factor bHLH117 [Cucumis melo])

HSP 1 Score: 467.6 bits (1202), Expect = 8.5e-128
Identity = 253/323 (78.33%), Postives = 269/323 (83.28%), Query Frame = 0


Query: 1   MESSAGDDASTNVLDDVYFNTMFSGVSLQSFLAGANQSHHPFLPSLFGGGYISDALTFPV 60
           MESS GDDAS++V DD  FN MFS VS QSFLA  N S        FGGGYI+DALTFP 
Sbjct: 1   MESSPGDDASSSVWDDACFNAMFSDVSFQSFLAAGNHSQ-------FGGGYIADALTFPD 60

Query: 61  ATTSFYPHASSNFVAESTDSSDASFLKLPKSEPMNVYGQTESEESTFLVHDSTSFPHLPD 120
           ATTSFYP  S+NF AE TDSSD  F KLPKSEPM+VY  TE++E  F++HDSTSFPHLPD
Sbjct: 61  ATTSFYPQPSTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLPD 120

Query: 121 LRSLEQCSSSFNKRARVDSVLNPVQMVEPMVRGSEGLQNFLVPY-QYKPSLDL-TGSAAV 180
           LRSLEQ SSSFNKRARVDS+ NP+QMVEPMVRG EG QNF VPY QYK S DL T SA  
Sbjct: 121 LRSLEQRSSSFNKRARVDSMSNPLQMVEPMVRGCEGFQNFFVPYGQYKTSSDLITTSATA 180

Query: 181 SPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 240
           SPTVQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ
Sbjct: 181 SPTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQ 240

Query: 241 SMPCESAIST--NSNHYISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 300
           SMPCESA+S+  +SN YI+GVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL
Sbjct: 241 SMPCESALSSYNSSNPYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 300

Query: 301 GIIQKIAEKRVLLQQMSAFHHKP 320
           G+IQKIAEKRVL      FH KP
Sbjct: 301 GLIQKIAEKRVL----PTFHPKP 312

[Close]

BLAST of Lcy08g005280 vs. TAIR 10
Match: AT3G22100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 2.5e-21
Identity = 69/186 (37.10%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 112 STSFPHLPDLRSLEQCSSSFNKRARVDSVLNPVQM-VEPMVRGSEGLQNFLVPYQYKPSL 171
           +T F HLPDL+S             +D+V  P  M + P +          +P   +  L
Sbjct: 80  TTPFLHLPDLKS-------------IDAVEEPTTMKLFPSLSPP-------LPAAKRQKL 139

Query: 172 DLTGSAAVSPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFL 231
           + T S+  S +           +R+K+SDK R L+KL+PW++KM++A  LEE+ KY+KFL
Sbjct: 140 NSTSSSTTSGSPTASNDGGIITKRRKISDKIRSLEKLMPWERKMNLAMTLEESHKYIKFL 199

Query: 232 QAQLLALQSMPCESAISTNSNHYISGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCV 291
           Q+Q+ +L+ MP ES  +T       G    L+ L R Q+LQVL NSP ++ +L S+  CV
Sbjct: 200 QSQIASLRWMPLESVYNTAGE---VGETDLLKSLTRQQILQVLANSPGSRNVLSSRGVCV 242

Query: 292 FSAEQL 297
           FS EQL
Sbjct: 260 FSYEQL 242

[Close]

BLAST of Lcy08g005280 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.8e-09
Identity = 29/56 (51.79%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 185 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLALQSM 241
           P++  ARQRR+++S+K R LQ L+P   KMD A+ML+EA  Y+KFL+AQ+ AL+++
Sbjct: 279 PQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENL 334

[Close]

BLAST of Lcy08g005280 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-08
Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 177 AVSPTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLA 236
           A   T   P+S  AR+RR+K++++ + LQ L+P   K+DI+TMLEEA  YVKFLQ Q+  
Sbjct: 169 ATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKL 228

Query: 237 LQS 240
           L S
Sbjct: 229 LSS 231

[Close]

BLAST of Lcy08g005280 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.5e-08
Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 169 SLDLTGSAAVS-PTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYV 228
           +L+L G    S      P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA +YV
Sbjct: 230 ALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYV 289

Query: 229 KFLQAQLLALQS 240
           KFLQ Q+  L S
Sbjct: 290 KFLQLQIKLLSS 301

[Close]

BLAST of Lcy08g005280 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 )

HSP 1 Score: 57.0 bits (136), Expect = 3.2e-08
Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 169 SLDLTGSAAVS-PTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYV 228
           +L+L G    S      P+S  AR+RR++++++ R LQ L+P   K+DI+TMLEEA  YV
Sbjct: 259 ALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYV 318

Query: 229 KFLQAQLLALQS 240
           KFLQ Q+  L S
Sbjct: 319 KFLQLQIKLLSS 330

The following BLAST results are available for this feature:

BLAST of Lcy08g005280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRJ4	3.6e-20	37.10	Transcription factor bHLH117 OS=Arabidopsis thaliana OX=3702 GN=BHLH117 PE=2 SV=...	[more]
Q8S3D2	5.3e-08	51.79	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
A0A0P0WQ90	1.6e-07	50.00	Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q8LEG1	2.7e-07	49.21	Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1	[more]
Q7XHI9	3.5e-07	45.83	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]

BLAST of Lcy08g005280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TAD0	1.7e-129	78.64	Transcription factor bHLH117 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C0Y6	4.1e-128	78.33	transcription factor bHLH117 OS=Cucumis melo OX=3656 GN=LOC103495566 PE=4 SV=1	[more]
A0A0A0K6W7	3.5e-127	77.09	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044910 PE=4 S...	[more]
A0A6J1EXY4	7.5e-122	76.88	transcription factor bHLH117-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1C4H2	6.3e-121	73.76	transcription factor bHLH117 OS=Momordica charantia OX=3673 GN=LOC111007840 PE=4...	[more]

BLAST of Lcy08g005280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889062.1	3.5e-142	85.09	transcription factor bHLH117 [Benincasa hispida]	[more]
XP_023554551.1	3.7e-139	82.81	transcription factor bHLH117-like [Cucurbita pepo subsp. pepo]	[more]
KAG6572315.1	1.8e-138	82.81	Transcription factor basic helix-loop-helix 117, partial [Cucurbita argyrosperma...	[more]
KAA0040270.1	3.4e-129	78.64	transcription factor bHLH117 [Cucumis melo var. makuwa] >TYK07078.1 transcriptio...	[more]
XP_008455394.1	8.5e-128	78.33	PREDICTED: transcription factor bHLH117 [Cucumis melo]	[more]

BLAST of Lcy08g005280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22100.1	2.5e-21	37.10	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	3.8e-09	51.79	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27740.1	1.9e-08	49.21	root hair defective 6-like 4	[more]
AT2G14760.1	2.5e-08	45.83	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G33880.1	3.2e-08	45.83	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 187..236 e-value: 3.7E-9 score: 46.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 188..231 e-value: 1.5E-5 score: 24.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 181..230 score: 13.179313
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 184..250 e-value: 5.0E-9 score: 38.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 184..239
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 67..316
None	No IPR available	PANTHER	PTHR45914:SF24	TRANSCRIPTION FACTOR BHLH117	coord: 67..316

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g005280.1	Lcy08g005280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity