Lcy08g005050 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g005050
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	sigma intracellular receptor 2-like
Location	Chr08: 6645035 .. 6646963 (+)
RNA-Seq Expression	Lcy08g005050
Synteny	Lcy08g005050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAACAAAATCAATCACTCTTCTCACAGACACTGTGAGAAGAAATCTCTGCAAAATCATGGGCGCTCTTCTCAAGCTCGTCGACGCTCTGCTGTTCCTTGTCTTTCTCCTTCTCGCATTCGCATCGCCTCTAATCGATTTCCAGGTCATATTCCCTCGAACCCTTTTCCCTGATTTTCTCGTCGATCTCAAGAGCTGGTACATCGCCCAATCCGGCGATTACATAATGGCCGATGCTCCTCACTTCGTCGTTGGCCTCGTTTGGCTTGAGCTTCTCTTTCAATGGCCTCTTATACTTCTCAATCTCTACGCCTTCTTGGCTTCTAAGCCATGGTACAACACCACTTGTTTGATCTACGGTGTTTCTCTTGTGGCTTCCATGGTATTTTTCTATTCCTGCGTATTCCAATTTGGTTATTGAATTAGGGATGTTTGTTCTTTGCCTGTTGATCTGATCTGTTTGATTAAATCAATGCGTTTTTGCCTGCATATTGTGTTTATGTTAATTGCTTAATGGCTCTGTTGTTGGTTTTGTAATTGGTATAAAGAATGTCATTTCTTGATGCTTGATGTATTAGTTTGGTGATGTTGGAATCTGGATAGGATATCAACTTGAAAGAAGTCATAGGTAGTGATTTGAGACAGCTCTGTAAGATCATTTTCAATTATAAGTTTAGTTCGTGAACTTCTAAGATTGTGTCTATTTAGCTTAGATGGTTTAAAAAGTGTTTATAAGAAATACTTGAACTTTGTGCCTAATAAATCCATGTATTGATTTGTCACATTAATACTTACTTGGCATACCAATGGGGTATGTTTTGAGAATTACATGGATAGATGATTTTGGACAGGTTTAAGTATTTGACGTCGATAAACGGGTGGAGTTAATAGTGAGGACCCCCTAGACAAATTGAAAACTATAGAGTTTATTAGATTCACTTTAAAGTATAGGGATTAAATAGACATTAACTTCAGTGTTGTTTTTCAGCTTTTAAAAACACTTTCAAAGGATGTCATCGTGATTCTTGATGTATGTAGTTGGTGATGCTGATAGAAGTTATAGTTAGTGAAGTAAGGCAAGGTAGTCTTAAACTAGCTTGGAACCTGTATTCTTGTCAATAAACTAAGGTTTCAACTTTTAAGCAATCAGGCACTTAGCTTAATAGTGCTAGTTCTTAAACATCTTTTTGAGTACTCTTAGATATTTTTAACGCTTTGATATACTGCCTGAATACATGTTACAAAGGATTTTTCTGCTTCATTTGTTAACCTTCTTGTAGAGATTCACTGGTTTCTGTTTCATTTCTTTTAGAGAAATATTACTTAAACTCAGTTTCTTCTTACATTACATTACATCCTGTGGCCGTGTAATTTCAGTCTGCTATAATGGGTGAAATGGTTGGATCGAACCGGGCGTCTAGTACTCTGTTGACGATATACTGGCCCTTCTTGGGTTTGGGAGTTTTGGCCATGCTACGTGGGCTCGTGCCGTGCTCGAGCAAGGCTACGATCATCGGCACCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGAAGCGCCATACTAAATCGCCCAAAAGAGTGCCTGTATCACCTTTTCTGCAGCTACGTGGTTTTCCATTAGTCTTTCATTGTATTAGTGGTAATGGTTCAAAGGCATCCTTGAGAGTTTCCAGAATAAGGTCAATGTACTTGAGTTTTGAGAATGCAAAGGAAAGACATGAATCGAACTACATGAATGTGCTTGTTTCATTAATGGAAAAAATGAGTACTATGAAATACATTGACATTCAGCTTGAAAAATGGTATTTGTTTGTTAAGGATTCATATTTTGAATTTAGGTCCATTTGTTTGCATTGGTCTATATGTTTTATAGAAATGTAGATGCCTAAGCCTTTTAGGATGTCCATAAGAAATGCATTTACATGAGA

mRNA sequence

CCAACAAAATCAATCACTCTTCTCACAGACACTGTGAGAAGAAATCTCTGCAAAATCATGGGCGCTCTTCTCAAGCTCGTCGACGCTCTGCTGTTCCTTGTCTTTCTCCTTCTCGCATTCGCATCGCCTCTAATCGATTTCCAGGTCATATTCCCTCGAACCCTTTTCCCTGATTTTCTCGTCGATCTCAAGAGCTGGTACATCGCCCAATCCGGCGATTACATAATGGCCGATGCTCCTCACTTCGTCGTTGGCCTCGTTTGGCTTGAGCTTCTCTTTCAATGGCCTCTTATACTTCTCAATCTCTACGCCTTCTTGGCTTCTAAGCCATGGTACAACACCACTTGTTTGATCTACGGTGTTTCTCTTGTGGCTTCCATGTCTGCTATAATGGGTGAAATGGTTGGATCGAACCGGGCGTCTAGTACTCTGTTGACGATATACTGGCCCTTCTTGGGTTTGGGAGTTTTGGCCATGCTACGTGGGCTCGTGCCGTGCTCGAGCAAGGCTACGATCATCGGCACCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGAAGCGCCATACTAAATCGCCCAAAAGAGTGCCTGTATCACCTTTTCTGCAGCTACGTGGTTTTCCATTAGTCTTTCATTGTATTAGTGGTAATGGTTCAAAGGCATCCTTGAGAGTTTCCAGAATAAGGTCAATGTACTTGAGTTTTGAGAATGCAAAGGAAAGACATGAATCGAACTACATGAATGTGCTTGTTTCATTAATGGAAAAAATGAGTACTATGAAATACATTGACATTCAGCTTGAAAAATGGTATTTGTTTGTTAAGGATTCATATTTTGAATTTAGGTCCATTTGTTTGCATTGGTCTATATGTTTTATAGAAATGTAGATGCCTAAGCCTTTTAGGATGTCCATAAGAAATGCATTTACATGAGA

Coding sequence (CDS)

ATGGGCGCTCTTCTCAAGCTCGTCGACGCTCTGCTGTTCCTTGTCTTTCTCCTTCTCGCATTCGCATCGCCTCTAATCGATTTCCAGGTCATATTCCCTCGAACCCTTTTCCCTGATTTTCTCGTCGATCTCAAGAGCTGGTACATCGCCCAATCCGGCGATTACATAATGGCCGATGCTCCTCACTTCGTCGTTGGCCTCGTTTGGCTTGAGCTTCTCTTTCAATGGCCTCTTATACTTCTCAATCTCTACGCCTTCTTGGCTTCTAAGCCATGGTACAACACCACTTGTTTGATCTACGGTGTTTCTCTTGTGGCTTCCATGTCTGCTATAATGGGTGAAATGGTTGGATCGAACCGGGCGTCTAGTACTCTGTTGACGATATACTGGCCCTTCTTGGGTTTGGGAGTTTTGGCCATGCTACGTGGGCTCGTGCCGTGCTCGAGCAAGGCTACGATCATCGGCACCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGA

Protein sequence

MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADAPHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNRASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTRPSNGRKKRA

Homology

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BLAST of Lcy08g005050 vs. ExPASy Swiss-Prot
Match: Q6DFQ5 (Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.0e-07
Identity = 41/154 (26.62%), Postives = 71/154 (46.10%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           M    +L++ + F  F      + L+D Q + P +L+P  L+DL  WY     D++MA+ 
Sbjct: 1   MAVCARLLEWIFFFYFFSHIPITLLVDLQAVLPPSLYPQELLDLMKWYTVAFKDHLMANP 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFL-ASKPWYNTTCLIYGVSLVASMSAIMGEMVGSN 120
           P +    V+ E + Q P   +  YAF      W     ++Y   +  ++ AI+G ++   
Sbjct: 61  PPWFKSFVYCEAILQLPFFPVAAYAFFKGGCKWIRIPAIVYSAHVATTVIAIIGHILFGE 120

Query: 121 RASS------------TLLTIYWPFLGLGVLAML 142
              S            TL++IY P+L + VL +L
Sbjct: 121 FPKSDVIAPLTQKDRLTLVSIYAPYLLVPVLLLL 154

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BLAST of Lcy08g005050 vs. ExPASy TrEMBL
Match: A0A6J1GM86 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455258 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.1e-75
Identity = 149/166 (89.76%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGALLKLVDALLFL FLLLA  SPLIDFQVIFPRTLFP FL+DLK+WYI QSGDYIMAD+
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           PHFVVGLVWLELLFQWPL+LLNLYAFLA+K WYNTTCLIYGVSLVASMSAI+GEMVGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYAFLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTRPSNGRKKRA 167
           AS+TL+TIY+PFLGLGVLAMLRGLV CSSKATI GTRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of Lcy08g005050 vs. ExPASy TrEMBL
Match: A0A6J1HVX1 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468330 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.6e-75
Identity = 148/166 (89.16%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGALLKLVDALLFL FLLLA  SPLIDFQVIFP+TLFP FL+DLK+WYI QSGDYIMAD+
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPQTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           PHFVV LVWLELLFQWPL+LLNLYAFLA+KPWYNTTCLIYGVSLVASMSAI+GEMVGSNR
Sbjct: 61  PHFVVALVWLELLFQWPLLLLNLYAFLAAKPWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTRPSNGRKKRA 167
           AS+TL+TIY+PFLGLGVLAMLRGLV CSSKATI GTRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of Lcy08g005050 vs. ExPASy TrEMBL
Match: A0A6J1JIQ0 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486176 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.1e-71
Identity = 136/166 (81.93%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGALLKLVDALLFL FLLLA   PLIDFQ +FP++ +PDF++DLKSWY+AQSGDY+M +A
Sbjct: 1   MGALLKLVDALLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKSWYVAQSGDYLMVEA 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           PHFVVGL+W ELLFQWPL+ LNLYAFL+SK W+NTTCLIYGVSLV+SMSA MGE+VGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWFNTTCLIYGVSLVSSMSATMGEVVGSNR 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTRPSNGRKKRA 167
           AS+TLLTIYWPF+GLGVLAMLRGLVPCSSKATI G RPSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLAMLRGLVPCSSKATINGPRPSNGRKKRA 166

[Close]

BLAST of Lcy08g005050 vs. ExPASy TrEMBL
Match: A0A0A0K5K2 (EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.2e-69
Identity = 135/166 (81.33%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGA LKL+D LLFL+FL+LA  SPLIDFQ+IFP TLFPDFL+DLK+ Y  Q GDY+MA++
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           P F+VGLVWLEL FQWP++LLNLYAFLASKPWYNTTCLIYGVS+V+SMSA++GEMVGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTRPSNGRKKRA 167
           AS+TLLTIY+PFLGLGVLAMLRGLVPCSSKA I GTRPSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITGTRPSNGRKKRA 166

[Close]

BLAST of Lcy08g005050 vs. ExPASy TrEMBL
Match: A0A6J1EVW1 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111437055 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.5e-69
Identity = 133/166 (80.12%), Postives = 149/166 (89.76%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGALLKLVD LLFL FLLLA   PLIDFQ +FP++ +PDF++DLK WY+AQSGDY+MA+A
Sbjct: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           PHFVVGL+W ELLFQWPL+ LNLYAFL+SK WY TTCLIYGVSLV+SMSA MGE+VGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTRPSNGRKKRA 167
           AS+TLLTIYWPF+GLGVLA LRGLVPCSSKA I G RPSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 166

[Close]

BLAST of Lcy08g005050 vs. NCBI nr
Match: XP_022952624.1 (sigma intracellular receptor 2-like [Cucurbita moschata])

HSP 1 Score: 291.6 bits (745), Expect = 4.3e-75
Identity = 149/166 (89.76%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGALLKLVDALLFL FLLLA  SPLIDFQVIFPRTLFP FL+DLK+WYI QSGDYIMAD+
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           PHFVVGLVWLELLFQWPL+LLNLYAFLA+K WYNTTCLIYGVSLVASMSAI+GEMVGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYAFLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTRPSNGRKKRA 167
           AS+TL+TIY+PFLGLGVLAMLRGLV CSSKATI GTRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of Lcy08g005050 vs. NCBI nr
Match: XP_022969277.1 (sigma intracellular receptor 2-like [Cucurbita maxima])

HSP 1 Score: 290.8 bits (743), Expect = 7.4e-75
Identity = 148/166 (89.16%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGALLKLVDALLFL FLLLA  SPLIDFQVIFP+TLFP FL+DLK+WYI QSGDYIMAD+
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPQTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           PHFVV LVWLELLFQWPL+LLNLYAFLA+KPWYNTTCLIYGVSLVASMSAI+GEMVGSNR
Sbjct: 61  PHFVVALVWLELLFQWPLLLLNLYAFLAAKPWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTRPSNGRKKRA 167
           AS+TL+TIY+PFLGLGVLAMLRGLV CSSKATI GTRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of Lcy08g005050 vs. NCBI nr
Match: KAG7011913.1 (Transmembrane protein 97, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.1 bits (736), Expect = 4.8e-74
Identity = 147/166 (88.55%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGALLKLVDALLFL FLLLA  SPLIDFQVIFPRTLFP FL+DLK+WYI QSGDYIMAD+
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           PHFVVGLVWLELLFQWPL+LLNLYA LA+K WYNTTCLIYGVSLVASMSAI+GEMVGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTRPSNGRKKRA 167
           AS+TL+TIY+PFLGLGVLAMLRGLV CSSKATI GT+PSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 166

[Close]

BLAST of Lcy08g005050 vs. NCBI nr
Match: KAG6572300.1 (Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 286.6 bits (732), Expect = 1.4e-73
Identity = 146/166 (87.95%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGALLKLVDALLFL FLLLA  SPLIDFQVIFPRTLFP FL+DLK+WYI QSGDYIMAD+
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           PHFVVGLVWLELLFQWPL+LLNLYA LA+K WYNTTCLIYGVSLVASMSAI+GEMVGSN+
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNQ 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTRPSNGRKKRA 167
           AS+TL+TIY+PFLGLGVLAMLRGLV CSSKATI GT+PSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 166

[Close]

BLAST of Lcy08g005050 vs. NCBI nr
Match: XP_038887415.1 (sigma intracellular receptor 2 [Benincasa hispida])

HSP 1 Score: 282.3 bits (721), Expect = 2.6e-72
Identity = 145/166 (87.35%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGALLKLVDALLFLVFLLLAF SPLIDFQ+IFP+TLFPDFL+DLK+ YI Q GDY+MA++
Sbjct: 1   MGALLKLVDALLFLVFLLLAFISPLIDFQLIFPQTLFPDFLIDLKASYIHQYGDYLMAES 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           P FVVGLVWLELLFQWPL+LLNLYAFLASKPWYNTTCLIYGVS+VASMSAI+GEMVGSNR
Sbjct: 61  PPFVVGLVWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAILGEMVGSNR 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTRPSNGRKKRA 167
           AS+TLLTIY+PFLG GVLAMLRGLV CSSKAT+ GTRPSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGFGVLAMLRGLVSCSSKATVTGTRPSNGRKKRA 166

[Close]

BLAST of Lcy08g005050 vs. TAIR 10
Match: AT2G32380.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 176.4 bits (446), Expect = 1.9e-44
Identity = 91/168 (54.17%), Postives = 124/168 (73.81%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGA  KL+DA+LFL F L+A  +PLID Q   P  +FP F+VDL  WYI + GDY++ + 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           PHF+VGLVW ELL  WPL ++N+YA LA K W+ TT ++YG S+V SM+AI+GEM+GS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKA-TIIGTRPS-NGRKKRA 167
           AS  LL +Y PF+G+G+LA+LRGL+  S+K+   +G RP+   R+KRA
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLLSQSNKSGGAVGKRPAILARRKRA 168

[Close]

BLAST of Lcy08g005050 vs. TAIR 10
Match: AT1G05210.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 172.9 bits (437), Expect = 2.1e-43
Identity = 88/152 (57.89%), Postives = 113/152 (74.34%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGAL KL+D  LF+ F+ +A  +PLID Q   P  ++P FL DLKS YIA  GDY++ + 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           PHF+VGLVW ELLF WPL + N+YA LA K W+ TTCL+YG SLV SM+AI+G+M+GS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKAT 153
           AS  LL +Y PF+G G+LA+LRGLV  S+K T
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTKNT 152

[Close]

BLAST of Lcy08g005050 vs. TAIR 10
Match: AT1G05220.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 149.8 bits (377), Expect = 1.9e-36
Identity = 76/157 (48.41%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGAL KL++  LF  F L+A   PL++ Q++FP  ++P  L DLK WY ++  DY+  + 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           P F VGLVW E++F  PL ++N+YA L SK W+ TT L+YG S + SM+AI+G+M+GS +
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTR 158
            ++ LL  Y PF+GL +LAMLRGLV CS+K + +  R
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTKRSTVLAR 156

[Close]

BLAST of Lcy08g005050 vs. TAIR 10
Match: AT1G05220.2 (Transmembrane protein 97, predicted )

HSP 1 Score: 149.8 bits (377), Expect = 1.9e-36
Identity = 76/157 (48.41%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 1   MGALLKLVDALLFLVFLLLAFASPLIDFQVIFPRTLFPDFLVDLKSWYIAQSGDYIMADA 60
           MGAL KL++  LF  F L+A   PL++ Q++FP  ++P  L DLK WY ++  DY+  + 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PHFVVGLVWLELLFQWPLILLNLYAFLASKPWYNTTCLIYGVSLVASMSAIMGEMVGSNR 120
           P F VGLVW E++F  PL ++N+YA L SK W+ TT L+YG S + SM+AI+G+M+GS +
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASSTLLTIYWPFLGLGVLAMLRGLVPCSSKATIIGTR 158
            ++ LL  Y PF+GL +LAMLRGLV CS+K + +  R
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTKRSTVLAR 156

The following BLAST results are available for this feature:

BLAST of Lcy08g005050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DFQ5	4.0e-07	26.62	Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1	[more]

BLAST of Lcy08g005050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GM86	2.1e-75	89.76	sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC11145525...	[more]
A0A6J1HVX1	3.6e-75	89.16	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468330 ...	[more]
A0A6J1JIQ0	4.1e-71	81.93	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486176 ...	[more]
A0A0A0K5K2	2.2e-69	81.33	EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4...	[more]
A0A6J1EVW1	6.5e-69	80.12	sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC11143705...	[more]

BLAST of Lcy08g005050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952624.1	4.3e-75	89.76	sigma intracellular receptor 2-like [Cucurbita moschata]	[more]
XP_022969277.1	7.4e-75	89.16	sigma intracellular receptor 2-like [Cucurbita maxima]	[more]
KAG7011913.1	4.8e-74	88.55	Transmembrane protein 97, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6572300.1	1.4e-73	87.95	Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038887415.1	2.6e-72	87.35	sigma intracellular receptor 2 [Benincasa hispida]	[more]

BLAST of Lcy08g005050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32380.1	1.9e-44	54.17	Transmembrane protein 97, predicted	[more]
AT1G05210.1	2.1e-43	57.89	Transmembrane protein 97, predicted	[more]
AT1G05220.1	1.9e-36	48.41	Transmembrane protein 97, predicted	[more]
AT1G05220.2	1.9e-36	48.41	Transmembrane protein 97, predicted	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016964	Sigma intracellular receptor 2	PIRSF	PIRSF031032	TMP_97	coord: 1..156 e-value: 7.8E-30 score: 101.7
None	No IPR available	PFAM	PF05241	EBP	coord: 40..139 e-value: 1.3E-15 score: 57.8
None	No IPR available	PANTHER	PTHR31204	SIGMA INTRACELLULAR RECEPTOR 2	coord: 1..166
None	No IPR available	PANTHER	PTHR31204:SF6	SUBFAMILY NOT NAMED	coord: 1..166
IPR033118	EXPERA domain	PROSITE	PS51751	EXPERA	coord: 8..140 score: 16.272432

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g005050.1	Lcy08g005050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane