Lcy08g004440 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g004440
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionprotein E6-like
LocationChr08: 5917260 .. 5918519 (-)
RNA-Seq ExpressionLcy08g004440
SyntenyLcy08g004440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCAATCCCCGGCATAATTCATCGAAATCTCAACAAGAAATCTCATCGATCCATTTTTATAAATTCAACCAAATCAAACCATACATTTCCATACCTTTCTTCCTCCGATCTGTACTGTGTACTGTATCAGCTTCCATCGCTTCCATGGCTATGGCAGCTTCCACTACTTTCAAGCATTTCTTCTTCTTCTTCTTCCTCCTCCTCACTTTCTCCTCCCTCCAAATCGAAGCCCGAGTCAACAAATTCTTCAGCAAATTCATCCACACCGATCAGACTGTTGTTCTTCCGGTTCCCCCTTCCCTGGCGCCGGTCTCTGCTCCGCCGGAGTTATCTCCTTCTCTGGCGCCGACGCCGGCTCCCGCGCCGTTTTTCGACGAATCGCAGAATGCTTACGGTCTGTACGGACGCGATTCCGATGACGGCGAGAGTAGCCGGACGATCACCGACGTGGAGGAGGAGATTCTCGCGGAGGACGGCGAGGAGAGCTACAAATCTGGCTATCCGAAGACGAATTTACACAGCGACAGTTTCGGAAGCCCTAGTAGATACGAGCAGTACCAGAGCAATTACGGGAACAAGTACGAGAACAATGGATATAGAAATTCCGAGTACGAGAACAATCAGTACAGAAATTCGGAGCACGAGAGCAATTTTGAGAACAATGGCGGGAGAAATTACCAGTACCAGAGCAATTTCGAGGACAACGGCTACAGAAGGAGCCGATTCGAACCGACGGAGCGGCAAGGGATGAGCGACACCAGATTCATGGAGAACGGGAGGTACTATCACGACATTAACTCGGGGAATGGAGGAGAAGGCGAATCGTACGGAAGCAAGAAGAATCCCTACGAGTTCGATACAATGGAGGAGTATGAGAAGAGCGAGGGATTTCTTCCTTGATGCAGAGAGGGATGGATTTCTAGGGTTTAACTTGAACTTGATCTCGATCTCGAACCCCTAAATTATGGAGGTTTTTGTTTCTGTGTGTGTGATTTTGATTTTTGGTGCTTTTATCTTTGAGTTGTGATTGTTTTTGCACAACTTGAATGAATGTTTTGGGCTTGAATTTTATGTGTTCTTGAATGTAGAAAAATGATACAGGAAAAATGGTGTTTCCATTTTGGAAATAAATTCCAGAATGAGATTTTAGATTCAATATCAGATCTGTGTGTTTTTGAGTTCAATTGTTGAAAAGATCCATAAATTATGATCAGTACAAAAGTTCATATGAATGAAATTCTGAGACGAATTTGAATTTA

mRNA sequence

CCTCAATCCCCGGCATAATTCATCGAAATCTCAACAAGAAATCTCATCGATCCATTTTTATAAATTCAACCAAATCAAACCATACATTTCCATACCTTTCTTCCTCCGATCTGTACTGTGTACTGTATCAGCTTCCATCGCTTCCATGGCTATGGCAGCTTCCACTACTTTCAAGCATTTCTTCTTCTTCTTCTTCCTCCTCCTCACTTTCTCCTCCCTCCAAATCGAAGCCCGAGTCAACAAATTCTTCAGCAAATTCATCCACACCGATCAGACTGTTGTTCTTCCGGTTCCCCCTTCCCTGGCGCCGGTCTCTGCTCCGCCGGAGTTATCTCCTTCTCTGGCGCCGACGCCGGCTCCCGCGCCGTTTTTCGACGAATCGCAGAATGCTTACGGTCTGTACGGACGCGATTCCGATGACGGCGAGAGTAGCCGGACGATCACCGACGTGGAGGAGGAGATTCTCGCGGAGGACGGCGAGGAGAGCTACAAATCTGGCTATCCGAAGACGAATTTACACAGCGACAGTTTCGGAAGCCCTAGTAGATACGAGCAGTACCAGAGCAATTACGGGAACAAGTACGAGAACAATGGATATAGAAATTCCGAGTACGAGAACAATCAGTACAGAAATTCGGAGCACGAGAGCAATTTTGAGAACAATGGCGGGAGAAATTACCAGTACCAGAGCAATTTCGAGGACAACGGCTACAGAAGGAGCCGATTCGAACCGACGGAGCGGCAAGGGATGAGCGACACCAGATTCATGGAGAACGGGAGGTACTATCACGACATTAACTCGGGGAATGGAGGAGAAGGCGAATCGTACGGAAGCAAGAAGAATCCCTACGAGTTCGATACAATGGAGGAGTATGAGAAGAGCGAGGGATTTCTTCCTTGATGCAGAGAGGGATGGATTTCTAGGGTTTAACTTGAACTTGATCTCGATCTCGAACCCCTAAATTATGGAGGTTTTTGTTTCTGTGTGTGTGATTTTGATTTTTGGTGCTTTTATCTTTGAGTTGTGATTGTTTTTGCACAACTTGAATGAATGTTTTGGGCTTGAATTTTATGTGTTCTTGAATGTAGAAAAATGATACAGGAAAAATGGTGTTTCCATTTTGGAAATAAATTCCAGAATGAGATTTTAGATTCAATATCAGATCTGTGTGTTTTTGAGTTCAATTGTTGAAAAGATCCATAAATTATGATCAGTACAAAAGTTCATATGAATGAAATTCTGAGACGAATTTGAATTTA

Coding sequence (CDS)

ATGGCTATGGCAGCTTCCACTACTTTCAAGCATTTCTTCTTCTTCTTCTTCCTCCTCCTCACTTTCTCCTCCCTCCAAATCGAAGCCCGAGTCAACAAATTCTTCAGCAAATTCATCCACACCGATCAGACTGTTGTTCTTCCGGTTCCCCCTTCCCTGGCGCCGGTCTCTGCTCCGCCGGAGTTATCTCCTTCTCTGGCGCCGACGCCGGCTCCCGCGCCGTTTTTCGACGAATCGCAGAATGCTTACGGTCTGTACGGACGCGATTCCGATGACGGCGAGAGTAGCCGGACGATCACCGACGTGGAGGAGGAGATTCTCGCGGAGGACGGCGAGGAGAGCTACAAATCTGGCTATCCGAAGACGAATTTACACAGCGACAGTTTCGGAAGCCCTAGTAGATACGAGCAGTACCAGAGCAATTACGGGAACAAGTACGAGAACAATGGATATAGAAATTCCGAGTACGAGAACAATCAGTACAGAAATTCGGAGCACGAGAGCAATTTTGAGAACAATGGCGGGAGAAATTACCAGTACCAGAGCAATTTCGAGGACAACGGCTACAGAAGGAGCCGATTCGAACCGACGGAGCGGCAAGGGATGAGCGACACCAGATTCATGGAGAACGGGAGGTACTATCACGACATTAACTCGGGGAATGGAGGAGAAGGCGAATCGTACGGAAGCAAGAAGAATCCCTACGAGTTCGATACAATGGAGGAGTATGAGAAGAGCGAGGGATTTCTTCCTTGA

Protein sequence

MAMAASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQTVVLPVPPSLAPVSAPPELSPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAEDGEESYKSGYPKTNLHSDSFGSPSRYEQYQSNYGNKYENNGYRNSEYENNQYRNSEHESNFENNGGRNYQYQSNFEDNGYRRSRFEPTERQGMSDTRFMENGRYYHDINSGNGGEGESYGSKKNPYEFDTMEEYEKSEGFLP
Homology
BLAST of Lcy08g004440 vs. ExPASy TrEMBL
Match: A0A6J1HVL6 (probable ATP-dependent RNA helicase ddx42 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468248 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.7e-84
Identity = 195/282 (69.15%), Postives = 221/282 (78.37%), Query Frame = 0

Query: 1   MAMAASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQTVVLPVPPSLAPVSAPP 60
           MAMAAS TFKH  F F LL   SS+QIEARVNKFFSKFIH D+ VVLPV  S APVS PP
Sbjct: 1   MAMAASITFKHLPFIFLLL---SSVQIEARVNKFFSKFIHADRDVVLPVAFSPAPVSVPP 60

Query: 61  ELSPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAEDGEE--SYKSG 120
           E+SPSLAPTPAPAPFFDESQNAYGLYG D+DD ESSRTITDVEEEILAEDGE+  ++KSG
Sbjct: 61  EISPSLAPTPAPAPFFDESQNAYGLYGSDADDSESSRTITDVEEEILAEDGEDKKTHKSG 120

Query: 121 YPKTNLHSDSFGSPSRYE------------QYQSN-------YGN-------KYENNG-Y 180
           Y +TNLH+D+F SP RYE            +Y+SN       Y N       +YENN  Y
Sbjct: 121 Y-QTNLHTDNFESPKRYESRNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNNEY 180

Query: 181 RNSEYE--NNQYRNSEHESNFENNGGRNYQYQSNFEDNGYRRSRFEPTERQGMSDTRFME 240
           RNSEYE  NN+YRN+E++S+FEN+G RNYQYQSN E +GYR+ R+EPTE+QGMSDTRFME
Sbjct: 181 RNSEYENNNNEYRNTEYKSDFENSGVRNYQYQSNVEGDGYRKRRYEPTEQQGMSDTRFME 240

Query: 241 NGRYYHDINSGNGGEGESYGSKKNPYEFDTMEEYEKSEGFLP 252
           NGRYYH+INSG G E +SYGSKK P EFD+MEEYEKSEGFLP
Sbjct: 241 NGRYYHEINSGIGEENKSYGSKKYPNEFDSMEEYEKSEGFLP 278

BLAST of Lcy08g004440 vs. ExPASy TrEMBL
Match: A0A6J1HX03 (protein E6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468248 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 2.3e-78
Identity = 198/336 (58.93%), Postives = 221/336 (65.77%), Query Frame = 0

Query: 1   MAMAASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQTVVLPVPPSLAPVSAPP 60
           MAMAAS TFKH  F F LL   SS+QIEARVNKFFSKFIH D+ VVLPV  S APVS PP
Sbjct: 1   MAMAASITFKHLPFIFLLL---SSVQIEARVNKFFSKFIHADRDVVLPVAFSPAPVSVPP 60

Query: 61  ELSPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAEDGEE--SYKSG 120
           E+SPSLAPTPAPAPFFDESQNAYGLYG D+DD ESSRTITDVEEEILAEDGE+  ++KSG
Sbjct: 61  EISPSLAPTPAPAPFFDESQNAYGLYGSDADDSESSRTITDVEEEILAEDGEDKKTHKSG 120

Query: 121 YPKTNLHSDSFGSPSRYE------------QYQSN-------YGN-------KYENNG-Y 180
           Y +TNLH+D+F SP RYE            +Y+SN       Y N       +YENN  Y
Sbjct: 121 Y-QTNLHTDNFESPKRYESRNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNNEY 180

Query: 181 RNSEYE---------------------------------------------NNQYRNSEH 240
           RNSEYE                                             NN+YRNSEH
Sbjct: 181 RNSEYENDNEHRTSEDENNNEHRNSEYENNNEHKNSEYENNNEHRNSEYENNNEYRNSEH 240

Query: 241 ESN-----------FENNGGRNYQYQSNFEDNGYRRSRFEPTERQGMSDTRFMENGRYYH 252
           E+N           FEN+G RNYQYQSN E +GYR+ R+EPTE+QGMSDTRFMENGRYYH
Sbjct: 241 ENNNEYRNTEYKSDFENSGVRNYQYQSNVEGDGYRKRRYEPTEQQGMSDTRFMENGRYYH 300

BLAST of Lcy08g004440 vs. ExPASy TrEMBL
Match: A0A6J1GLC8 (GATA zinc finger domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111455418 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 3.3e-72
Identity = 195/381 (51.18%), Postives = 220/381 (57.74%), Query Frame = 0

Query: 1   MAMAASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQTVVLPVPPSLAPVSAPP 60
           MAMAAS TFKH  F F +L   SS+QIEARVNKFFSKFIHTD+ VVLPV  S APVS PP
Sbjct: 1   MAMAASITFKHLPFIFLIL---SSVQIEARVNKFFSKFIHTDRDVVLPVAFSPAPVSVPP 60

Query: 61  ELSPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAEDG--EESYKSG 120
           E+SPSLAPTPAPAPFFDESQNAYGLYG D+D+ E SRTITDVEEEILAEDG  EES+KSG
Sbjct: 61  EISPSLAPTPAPAPFFDESQNAYGLYGSDADNSEGSRTITDVEEEILAEDGEDEESHKSG 120

Query: 121 YPKTNLHSDSFGSPSRYE------------QYQSN------------------------- 180
           Y +TNLH+D+F SP R E            +Y+SN                         
Sbjct: 121 Y-QTNLHTDNFESPKRSESNNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNNEY 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RNSEYENNNEHRTSEDENNNEHRNSEYENNNEHRTSEDENNNEHRNSEYENNNEHRTSED 240

Query: 241 ---------------------YGN-------KYENNG-YRNSEYE--NNQYRNSEHESNF 252
                                Y N       +YENN  YRNSEYE  NN+YRN+E++S+F
Sbjct: 241 ENNNEHRNSEYENNNEHKNSEYENNNEHRNSEYENNNEYRNSEYENNNNEYRNTEYKSDF 300

BLAST of Lcy08g004440 vs. ExPASy TrEMBL
Match: A0A6J1C3G6 (protein E6-like OS=Momordica charantia OX=3673 GN=LOC111007909 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 7.3e-72
Identity = 169/255 (66.27%), Postives = 189/255 (74.12%), Query Frame = 0

Query: 6   STTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQ------TVVLPVPPSLAPVSAP 65
           ++  KH  FFF LLL  SS+QIEARVNKFFSKFIHTD+      T  LPV PS AP+SAP
Sbjct: 2   ASALKHLPFFFLLLLLLSSVQIEARVNKFFSKFIHTDRNDASPLTPALPVAPSPAPLSAP 61

Query: 66  PELSPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAED-GEESYKSG 125
           PE+SP LAPT    PFF ESQNAYGLYGR SDD E++ +ITDVEEEILAED G+ESYKSG
Sbjct: 62  PEISPILAPT----PFFYESQNAYGLYGRASDDTENNPSITDVEEEILAEDGGDESYKSG 121

Query: 126 YPKTNLHSDSFGSPSRYEQYQSNYGNKYENNGYRNSEYENNQYRNSEHESNFENNGGRNY 185
           YPKT+ H   F S  R EQYQS+YG    NNGY NSEY              ENNGGRNY
Sbjct: 122 YPKTSFHGTDFESSRRDEQYQSSYG----NNGYGNSEY--------------ENNGGRNY 181

Query: 186 QYQSNFEDNGYRRSRFEPTERQGMSDTRFMENGRYYHDINSGNGGEGESYGSKKNP---- 245
           QY+SNFED G+RRSR+EP ERQGMSDTRF+ENG+YY+D NS  G  GESYGSKKNP    
Sbjct: 182 QYESNFEDGGFRRSRYEPRERQGMSDTRFVENGKYYYDANSRAGEGGESYGSKKNPIPNQ 234

Query: 246 YEFDTMEEYEKSEGF 250
           +EFD+MEEYEKSE F
Sbjct: 242 FEFDSMEEYEKSEEF 234

BLAST of Lcy08g004440 vs. ExPASy TrEMBL
Match: A0A5D3DDN1 (Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00230 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 3.1e-70
Identity = 171/256 (66.80%), Postives = 189/256 (73.83%), Query Frame = 0

Query: 2   AMAASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQTVVLPVPPSLAPVSAPPE 61
           A +ASTTF      FF LL  SS+Q EARVNKFFSKFIHTD   V+P   S AP+S PPE
Sbjct: 3   AASASTTFNFNHLSFFFLLLLSSVQTEARVNKFFSKFIHTDHEEVVPNTLSPAPLSVPPE 62

Query: 62  LSPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAEDG---EESYKSG 121
            SPSLAPTPAPAPFFDESQNAYGLYG D D  E+ RTITDVEEEIL  +G   E + KS 
Sbjct: 63  TSPSLAPTPAPAPFFDESQNAYGLYGSDPDTDENPRTITDVEEEILGGEGDQDETNRKSE 122

Query: 122 YPKTNLHSDSFGSPSRYEQYQSNYGNKYENNGYRNSEYEN-NQYRNSEHESNFENNGGRN 181
           +P  N       +    EQYQ+   N   NNG+RNSEYEN N+YRNSE+E+N  NN GRN
Sbjct: 123 FPMNNF----VQTRDDEEQYQNK--NYEYNNGFRNSEYENHNEYRNSEYENN--NNEGRN 182

Query: 182 YQYQSNFEDNGYRRSRFEPTERQGMSDTRFMENGRYYHDINSGNGGEGESYGSKKN--PY 241
           YQYQSNFED GYRRSRFEPTE+QGMSDTRFMENGRY+HDINS N  E  SYGSKK    Y
Sbjct: 183 YQYQSNFEDGGYRRSRFEPTEQQGMSDTRFMENGRYFHDINSKNDEENGSYGSKKKYPKY 242

Query: 242 EFDTMEEYEKSEGFLP 252
           EFD+MEEYE+SEG LP
Sbjct: 243 EFDSMEEYERSEGLLP 250

BLAST of Lcy08g004440 vs. NCBI nr
Match: XP_022969172.1 (probable ATP-dependent RNA helicase ddx42 isoform X2 [Cucurbita maxima])

HSP 1 Score: 321.2 bits (822), Expect = 7.7e-84
Identity = 195/282 (69.15%), Postives = 221/282 (78.37%), Query Frame = 0

Query: 1   MAMAASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQTVVLPVPPSLAPVSAPP 60
           MAMAAS TFKH  F F LL   SS+QIEARVNKFFSKFIH D+ VVLPV  S APVS PP
Sbjct: 1   MAMAASITFKHLPFIFLLL---SSVQIEARVNKFFSKFIHADRDVVLPVAFSPAPVSVPP 60

Query: 61  ELSPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAEDGEE--SYKSG 120
           E+SPSLAPTPAPAPFFDESQNAYGLYG D+DD ESSRTITDVEEEILAEDGE+  ++KSG
Sbjct: 61  EISPSLAPTPAPAPFFDESQNAYGLYGSDADDSESSRTITDVEEEILAEDGEDKKTHKSG 120

Query: 121 YPKTNLHSDSFGSPSRYE------------QYQSN-------YGN-------KYENNG-Y 180
           Y +TNLH+D+F SP RYE            +Y+SN       Y N       +YENN  Y
Sbjct: 121 Y-QTNLHTDNFESPKRYESRNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNNEY 180

Query: 181 RNSEYE--NNQYRNSEHESNFENNGGRNYQYQSNFEDNGYRRSRFEPTERQGMSDTRFME 240
           RNSEYE  NN+YRN+E++S+FEN+G RNYQYQSN E +GYR+ R+EPTE+QGMSDTRFME
Sbjct: 181 RNSEYENNNNEYRNTEYKSDFENSGVRNYQYQSNVEGDGYRKRRYEPTEQQGMSDTRFME 240

Query: 241 NGRYYHDINSGNGGEGESYGSKKNPYEFDTMEEYEKSEGFLP 252
           NGRYYH+INSG G E +SYGSKK P EFD+MEEYEKSEGFLP
Sbjct: 241 NGRYYHEINSGIGEENKSYGSKKYPNEFDSMEEYEKSEGFLP 278

BLAST of Lcy08g004440 vs. NCBI nr
Match: XP_022969171.1 (protein E6-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 302.0 bits (772), Expect = 4.8e-78
Identity = 198/336 (58.93%), Postives = 221/336 (65.77%), Query Frame = 0

Query: 1   MAMAASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQTVVLPVPPSLAPVSAPP 60
           MAMAAS TFKH  F F LL   SS+QIEARVNKFFSKFIH D+ VVLPV  S APVS PP
Sbjct: 1   MAMAASITFKHLPFIFLLL---SSVQIEARVNKFFSKFIHADRDVVLPVAFSPAPVSVPP 60

Query: 61  ELSPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAEDGEE--SYKSG 120
           E+SPSLAPTPAPAPFFDESQNAYGLYG D+DD ESSRTITDVEEEILAEDGE+  ++KSG
Sbjct: 61  EISPSLAPTPAPAPFFDESQNAYGLYGSDADDSESSRTITDVEEEILAEDGEDKKTHKSG 120

Query: 121 YPKTNLHSDSFGSPSRYE------------QYQSN-------YGN-------KYENNG-Y 180
           Y +TNLH+D+F SP RYE            +Y+SN       Y N       +YENN  Y
Sbjct: 121 Y-QTNLHTDNFESPKRYESRNDGNSGYRNSEYESNNDHRNSEYENNNEHRNSEYENNNEY 180

Query: 181 RNSEYE---------------------------------------------NNQYRNSEH 240
           RNSEYE                                             NN+YRNSEH
Sbjct: 181 RNSEYENDNEHRTSEDENNNEHRNSEYENNNEHKNSEYENNNEHRNSEYENNNEYRNSEH 240

Query: 241 ESN-----------FENNGGRNYQYQSNFEDNGYRRSRFEPTERQGMSDTRFMENGRYYH 252
           E+N           FEN+G RNYQYQSN E +GYR+ R+EPTE+QGMSDTRFMENGRYYH
Sbjct: 241 ENNNEYRNTEYKSDFENSGVRNYQYQSNVEGDGYRKRRYEPTEQQGMSDTRFMENGRYYH 300

BLAST of Lcy08g004440 vs. NCBI nr
Match: XP_023554545.1 (GATA zinc finger domain-containing protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-77
Identity = 197/337 (58.46%), Postives = 220/337 (65.28%), Query Frame = 0

Query: 1   MAMAASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQTVVLPVPPSLAPVSAPP 60
           MAMAAS TFKH  F FF+L   SS+QIEARVNKFFSKFIHTD+ VVLPV  S APVS PP
Sbjct: 1   MAMAASITFKHLPFIFFIL---SSVQIEARVNKFFSKFIHTDRDVVLPVAFSPAPVSVPP 60

Query: 61  ELSPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAEDG--EESYKSG 120
           E+SPSLAPT APAPFFDESQNAYGLYG D+DD E SRTITDVEEEILAEDG  EES+KSG
Sbjct: 61  EISPSLAPTLAPAPFFDESQNAYGLYGSDADDSEGSRTITDVEEEILAEDGEDEESHKSG 120

Query: 121 YPKTNLHSDSFGSPSRYE------------QYQSN------------------------- 180
           Y +TNLHSD+F SP R E            +Y+SN                         
Sbjct: 121 Y-QTNLHSDNFESPKRSESNNDGNSGYRNSEYESNNVHRNSEFENNNEHRNSEYENNNEY 180

Query: 181 -------------------------------------YGN-------KYENNG-YRNSEY 240
                                                Y N       +YENN  YRNSEY
Sbjct: 181 RNSEHENNNEHRTSEDENNNEHRNSEYENNNEHKNSEYENNNEHRNSEYENNNEYRNSEY 240

Query: 241 E--NNQYRNSEHESNFENNGGRNYQYQSNFEDNGYRRSRFEPTERQGMSDTRFMENGRYY 252
           E  NN+YRN+E++S+FENNG RNYQYQSN E +GYR+ R+EPTE+QGMSDTRFMENGRYY
Sbjct: 241 ENNNNEYRNTEYKSDFENNGVRNYQYQSNVEGDGYRKRRYEPTEQQGMSDTRFMENGRYY 300

BLAST of Lcy08g004440 vs. NCBI nr
Match: XP_038886989.1 (protein E6-like [Benincasa hispida])

HSP 1 Score: 297.0 bits (759), Expect = 1.6e-76
Identity = 176/255 (69.02%), Postives = 203/255 (79.61%), Query Frame = 0

Query: 4   AASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQTVV-LPVPPSLAPVSAPPEL 63
           AASTTF    FFFF +L  SS+QIEARVNKFFSKFI+TD+ VV   +PP  APVSAPPE+
Sbjct: 3   AASTTFNLLSFFFFFILLLSSVQIEARVNKFFSKFINTDREVVPTKLPP--APVSAPPEI 62

Query: 64  SPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAEDG----EESYKSG 123
           SPSLAPTPAPAPFFDESQNAYGLYGRD+D  E++RTITDVEEEILA DG    E+++K+ 
Sbjct: 63  SPSLAPTPAPAPFFDESQNAYGLYGRDADADENTRTITDVEEEILAGDGEDEDEDNHKAA 122

Query: 124 YPKTNLHSDSFGSPSRYEQYQSNYGNKYENNGYRNSEYEN-NQYRNSEHESNFENNGGRN 183
           YP TN  + ++G+        +NY N   NNG+RNSEYEN N+YRNSE+ES FENN  RN
Sbjct: 123 YPMTNSQTGNYGN--------NNYEN---NNGFRNSEYENHNEYRNSEYESAFENNNARN 182

Query: 184 YQYQSNFEDNGYRRSRFEPTERQGMSDTRFMENGRYYHDINSGNGGEGESYGSKKNP-YE 243
           YQYQSNFED+GYRR R EPT +QGMSDTRFMENGRY+HDINS NG E  SYG+ K P YE
Sbjct: 183 YQYQSNFEDDGYRRRRHEPTRQQGMSDTRFMENGRYFHDINSKNGEENGSYGNNKYPKYE 242

Query: 244 FDTMEEYEKSEGFLP 252
           FD+MEEYE+SEG LP
Sbjct: 243 FDSMEEYERSEGLLP 244

BLAST of Lcy08g004440 vs. NCBI nr
Match: KAG6572262.1 (hypothetical protein SDJN03_28990, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 294.3 bits (752), Expect = 1.0e-75
Identity = 192/337 (56.97%), Postives = 217/337 (64.39%), Query Frame = 0

Query: 1   MAMAASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQTVVLPVPPSLAPVSAPP 60
           MAMAAS TFKH  F F +L   SS+QIEARVNKFFSKFIHTD+ VVLPV  S APVS PP
Sbjct: 1   MAMAASITFKHLPFIFLIL---SSVQIEARVNKFFSKFIHTDRDVVLPVAFSPAPVSVPP 60

Query: 61  ELSPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAEDG--EESYKSG 120
           E+SPSLAPT APAPFFDESQNAYGLYG D+DD E SRTITDVEEEIL EDG  EES+KSG
Sbjct: 61  EISPSLAPTLAPAPFFDESQNAYGLYGSDADDSEGSRTITDVEEEILTEDGEDEESHKSG 120

Query: 121 YPKTNLHSDSFGSPSRYE------------------------------------------ 180
           Y +TNLH+D+F SP R E                                          
Sbjct: 121 Y-QTNLHTDNFESPKRSESNNHGNSGYRNSEYENDNDHRNSEYENNNEHRNSEYENNNEY 180

Query: 181 -------------------------QYQSNYGNK--------------YENNG-YRNSEY 240
                                    +Y++N  +K              YENN  YRNSEY
Sbjct: 181 RNSEYENNNEHGTSEDENNNEHRTSEYENNNEHKKSEYENNNEHRNSEYENNNEYRNSEY 240

Query: 241 E--NNQYRNSEHESNFENNGGRNYQYQSNFEDNGYRRSRFEPTERQGMSDTRFMENGRYY 252
           E  NN+YRN+E++S+FENNG RNYQYQSN E +GYR+ R+EPTE+QGMSDTRFMENGRYY
Sbjct: 241 ENNNNEYRNTEYKSDFENNGVRNYQYQSNVEGDGYRKRRYEPTEQQGMSDTRFMENGRYY 300

BLAST of Lcy08g004440 vs. TAIR 10
Match: AT1G03820.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to 1122 proteins in 102 species: Archae - 2; Bacteria - 28; Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other Eukaryotes - 1148 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06
Identity = 72/246 (29.27%), Postives = 94/246 (38.21%), Query Frame = 0

Query: 14  FFFFLLLTFSSLQIEARVNK-FFSKFIHTDQTVVLPVPPSLAPVSAPPELSPSLAPTPAP 73
           F F  +  F    +EAR  K FFSKF H D+               P     +L+P PAP
Sbjct: 10  FCFIAVFCFIVHNVEAREGKLFFSKFTHIDR---------------PNNKDVALSPAPAP 69

Query: 74  APFFDESQNAYGLYGRDS-------DDGESSRTITDVEEEILAEDGEESYKSGYPKTNLH 133
                  +   G +G  S       +   SS T TD E E L    +E   +  P+    
Sbjct: 70  GLAQANGRLGNGSFGPGSGMIPQTKESWPSSSTTTDEEFEKLMATFDEEKNTKLPEAFEE 129

Query: 134 SDSFGSPSRYEQYQSNYGNKYENNGYRNSEYENNQYRNSEHESNFENNGGRNYQYQSNFE 193
            +         + +  Y N   NNGY    Y  N Y          N+ GR Y  +    
Sbjct: 130 EEESEDSEDLNEPKDKYNNNNNNNGY---TYTTNNY----------NDNGRGYGNEE--- 189

Query: 194 DNGYRRSRFEPTERQGMSDTRFMENGRYYHDINSGNGGEGESYG-----SKKNPYEFDTM 247
                       E+QGMSDTR MENG+Y++D    N     S G        +  EF+TM
Sbjct: 190 ------------EKQGMSDTRVMENGKYFYDTRGRNSENTPSRGYENARGNDHTNEFETM 212

BLAST of Lcy08g004440 vs. TAIR 10
Match: AT2G33850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6; Bacteria - 52; Metazoa - 135; Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes - 2689 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-06
Identity = 75/271 (27.68%), Postives = 111/271 (40.96%), Query Frame = 0

Query: 3   MAASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIHTDQTVVLPVPPSLAPVSAPPEL 62
           MA ST+     FFF L L   S QI AR +  F KF   D       P +L P+    E 
Sbjct: 1   MAFSTS--SCLFFFLLTLVLFSTQISARNSYSFGKFQREDPKE--QNPNNLVPI----ET 60

Query: 63  SPSLAPTPAPAPFFDESQNAYGLYGRDSDDG----------------ESSRTITDVEEEI 122
           +    P      F  +S+N YGLYG ++ D                 + S +   + E  
Sbjct: 61  NEKKEPDDQNPAFIPQSENGYGLYGHETTDNNNEELNNNKYEDNVNYDDSFSTPSLSETA 120

Query: 123 LAEDGEESYKSGYPKTNLHSDSFGSPSRYEQYQSNYGNKYENNGYRNSEYENNQYRNSEH 182
             ++  ++YK  YPKT    D+    S YE   + YG    +N   N  Y+    +++ +
Sbjct: 121 QTQESYKNYKESYPKTTEIYDNNKDTSYYEN-SNAYGTDKRDNDI-NDPYKGYSNKDTSY 180

Query: 183 ESNFENNGGRNYQYQSNFEDNGYRRSRFEPTERQGMSDTRFMENGRYYHDINSGNG---- 242
             N    G    + +  +   GY  +     ERQGMSDTR+M NG+YY+D++        
Sbjct: 181 YENPNTYGTEKREKEPAY--RGYNNN----VERQGMSDTRYMANGKYYYDLDDDRNHGRF 240

BLAST of Lcy08g004440 vs. TAIR 10
Match: AT1G28400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins in 668 species: Archae - 72; Bacteria - 1460; Metazoa - 1191; Fungi - 1038; Plants - 174; Viruses - 64; Other Eukaryotes - 41375 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-05
Identity = 83/289 (28.72%), Postives = 114/289 (39.45%), Query Frame = 0

Query: 3   MAASTTFKHFFFFFFLLLTFSSLQIEARVNKFFSKFIH---TDQTVVLPVPPSLAPVSAP 62
           MA ST  +    FFF  L   S QI AR + FF KF      DQ     +P   +  +  
Sbjct: 1   MAFST--RGSLLFFFTTLVLLSTQIHARDSYFFGKFHRESPKDQNPNSFIPLETSEKTTV 60

Query: 63  PELSPSLAPTPAPAPFFDESQNAYGLYGRDSDDGESSRTITDVEEEILAEDGEESYKSGY 122
            E   +         F  ES N YGLYG ++    ++            ++ EE   +  
Sbjct: 61  EESVLNKKEQEQDPTFVPESGNGYGLYGHETTYNNNN------------DNKEEFNNNNK 120

Query: 123 PKTNLHSDSFGSPS------RYEQYQSNYGNKYEN---NGYRNSEYENN----------Q 182
               ++S +F +PS       +  Y+ NY  K EN    GY N E+ NN          +
Sbjct: 121 NDEKVNSKTFSTPSLSETEESFNNYEENYPKKTENYGTKGYNNEEFNNNNNKYDANFKEE 180

Query: 183 YRNSEHESNF------ENNGGRNYQYQ-----------SNFEDN----------GYRRSR 235
           + N++++ N+       NN   NY Y+            N EDN          G    R
Sbjct: 181 FNNNKYDENYAKEEFNNNNNNNNYNYKYDENVKEESFPENNEDNKKNVYNSNAYGTELER 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HVL63.7e-8469.15probable ATP-dependent RNA helicase ddx42 isoform X2 OS=Cucurbita maxima OX=3661... [more]
A0A6J1HX032.3e-7858.93protein E6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468248 PE=4 SV=1[more]
A0A6J1GLC83.3e-7251.18GATA zinc finger domain-containing protein 14-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1C3G67.3e-7266.27protein E6-like OS=Momordica charantia OX=3673 GN=LOC111007909 PE=4 SV=1[more]
A0A5D3DDN13.1e-7066.80Protein E6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G0023... [more]
Match NameE-valueIdentityDescription
XP_022969172.17.7e-8469.15probable ATP-dependent RNA helicase ddx42 isoform X2 [Cucurbita maxima][more]
XP_022969171.14.8e-7858.93protein E6-like isoform X1 [Cucurbita maxima][more]
XP_023554545.11.8e-7758.46GATA zinc finger domain-containing protein 14-like [Cucurbita pepo subsp. pepo][more]
XP_038886989.11.6e-7669.02protein E6-like [Benincasa hispida][more]
KAG6572262.11.0e-7556.97hypothetical protein SDJN03_28990, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT1G03820.11.4e-0629.27unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G33850.11.8e-0627.68unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G28400.13.4e-0528.72unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..182
NoneNo IPR availablePANTHERPTHR35274:SF5BNAC05G02100D PROTEINcoord: 3..246
IPR040290Protein E6-likePANTHERPTHR35274E6-LIKE PROTEINcoord: 3..246

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g004440.1Lcy08g004440.1mRNA