Lcy08g004250 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g004250
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr08: 5749133 .. 5750530 (-)
RNA-Seq Expression	Lcy08g004250
Synteny	Lcy08g004250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAACTTGAATTATTCATCTTCTGTATAGTGAGAAAAAAATAAAATAAAAAATAAAAATGAGTGGCGATTCTAAGGGTTTTGCATTGGTGGGTTTCTTATTCTTCATCCTCCTCTTCTCCTCGGAGATGACTGCAGCAAGGAAGCTTATCGCCGGAAAAAATGGTAAATTTTTTGTTCCACCGCCTGCCATTAGATATATTACCTTTAGGTCTTTAATCTTTAAAATTTTCAATTATTTATTTTTAATGTATTAAAAATCCTCATTCTTCATAAGAAAACATATTGAAAAAAAAAAACCATCTTTATCTTGGAGATGCTAAGGTGTTCAATTTTTACCAAAAACTTTCAATTCTATCATGTCACCCTGTAAATTTTTATAAAATTGTAATATTTAGCTAAAACTTGAAAATGTGTTACAATCACTACCGTTTGATGAAATTTTTGCTTGAAGAATTGTTGAGAAAAGCACTTTCATGTCATTACAAAATTGATAGGACAGCTGGATTTTCTTTGATTTTTTTAGAAGATACCAACAATGGTCCACTATCATTATTTGGACAAATTATTAGGTGCTTCTAGTACAATGACACTCTCTCTTTAGAACCGTCGGATGTACATCTTTAAATTTGTCTGTCCCATATAACCGTTGGATACAAAATCAAGGTACTTTTACAATTTTTCTCTCTTAATCCAACGGTGCAAAACTACCCGTCTCATTGTACCGGAGTACCAATACAAATGTTTTTAGAAAGAGTATACTTTATTGATGGCATGTTAGAAACGTACAAAGAAGACCTTCATTTGCATAATATTGTACAAATCTTGATTTCACTAAAATAGTACGTGTTTGAAGATTTTTAGATTTTTTTTCTTTTGGGGTTAAAATTAGTAGATGAAGTAGCAAAAATTGAATGAAAAGCAAAATCTTCGACAGTTATCCAAGTCTAAGGTCGAAGGGAAGAAATTGAAAGTGTTTATGTAATATTTTGAATGGTTTGCAGAAGCAGAAGTGGCCATACATGAAGCCAGCCTCCCCATAGAAAATTCCAACATCCCACCTTGCGTTCGCGGCCGGTATAATTCGTGCTTAGGAACAGGAAGCCCACGACCGTTGCCGTCCCCAAGCAGATGTTCATATGCACGGAGCTGCCCACCGCCAAACGGAAGAGGCCCCTAAAATGAAACACCATTAGAAACGGTTGATATGCCTCGAATCTGTTATCTAGCATACCGAATGATCAAGTACGGGTGTTGCCATATATAAACCCTCTTAACCTAATATGTCCTAATCTCTTTGTAATCTGCATATGTTTTCTCTTCACTAATAAAACTACTCTCTCCCTTTGTCCGTGGATGTAGCTAACACACCGTTAGTGCACTACGTAAATCTGTACTG

mRNA sequence

AACAACTTGAATTATTCATCTTCTGTATAGTGAGAAAAAAATAAAATAAAAAATAAAAATGAGTGGCGATTCTAAGGGTTTTGCATTGGTGGGTTTCTTATTCTTCATCCTCCTCTTCTCCTCGGAGATGACTGCAGCAAGGAAGCTTATCGCCGGAAAAAATGAAGCAGAAGTGGCCATACATGAAGCCAGCCTCCCCATAGAAAATTCCAACATCCCACCTTGCGTTCGCGGCCGGTATAATTCGTGCTTAGGAACAGGAAGCCCACGACCGTTGCCGTCCCCAAGCAGATGTTCATATGCACGGAGCTGCCCACCGCCAAACGGAAGAGGCCCCTAAAATGAAACACCATTAGAAACGGTTGATATGCCTCGAATCTGTTATCTAGCATACCGAATGATCAAGTACGGGTGTTGCCATATATAAACCCTCTTAACCTAATATGTCCTAATCTCTTTGTAATCTGCATATGTTTTCTCTTCACTAATAAAACTACTCTCTCCCTTTGTCCGTGGATGTAGCTAACACACCGTTAGTGCACTACGTAAATCTGTACTG

Coding sequence (CDS)

ATGAGTGGCGATTCTAAGGGTTTTGCATTGGTGGGTTTCTTATTCTTCATCCTCCTCTTCTCCTCGGAGATGACTGCAGCAAGGAAGCTTATCGCCGGAAAAAATGAAGCAGAAGTGGCCATACATGAAGCCAGCCTCCCCATAGAAAATTCCAACATCCCACCTTGCGTTCGCGGCCGGTATAATTCGTGCTTAGGAACAGGAAGCCCACGACCGTTGCCGTCCCCAAGCAGATGTTCATATGCACGGAGCTGCCCACCGCCAAACGGAAGAGGCCCCTAA

Protein sequence

MSGDSKGFALVGFLFFILLFSSEMTAARKLIAGKNEAEVAIHEASLPIENSNIPPCVRGRYNSCLGTGSPRPLPSPSRCSYARSCPPPNGRGP

Homology

The following BLAST results are available for this feature:

BLAST of Lcy08g004250 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g004250 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g004250 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy08g004250 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g004250.1	Lcy08g004250.1	mRNA