Lcy08g004030 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g004030
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr08: 5332523 .. 5339096 (+)
RNA-Seq ExpressionLcy08g004030
SyntenyLcy08g004030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCGCTTTCCAACTGAAATTAGAAAACAGAGCTGACACACTCGAAAACCTCGAAAATGGACCGAGCAACGAGGCTCTCAAAAGCCATTTACCTGAATTCCCACAATCCCGAGCTAGCATGGCTTCTCTTCAAGCGAATCCTCTCTTCCCCCATCGCCGCCTCCTCTTCCTTCTTCAAATCCTCTCTTCAATCTGTTCCCGTAATCGCCCGCATCCTCATCACTGCAAAAATGCACCCACAGATCGATCACCTTCACCAACTCCTCTTGTCGCAGCACCGCGATTTTGCTCGTCCATCTGGCTTTTCACTCGTTCGGGCGTTGGCCGATTTGGGTCTTTTCGAAAACGCCATTTCTCAGTTCCGATCGCTTCGAGCCAGGTTTCCTCATGACCCTCCTCCAATTTCTTTCTATAATTTTCTGTTTCGGTGCTCTTTGAAGGAGAGCCGTGTTGATTGTGTGATTTGGCTTTATAAGGATATGGTTGTTGCGAGAGTTAACCCACAGACTTATACTTTTAATCTGTTGATTCGTGCGCTTTGCGAAATGGGGTACTTGGAGAATGCACGAGAAGTGTTTGATAAAATGTCTGAAAAAGGGTGTCAGACTAATGAGTTTAGTCTTGGGATTTTGGTTCGTGGGTATTGTAGAGCTGGGCTCCATTGTCGAGGTGTTGAACTTTTGGACGAGATGAGGAGCTGTGGTACTGTTCCCAATAGGGTTGCGTACAATACTGTGATATCTGCTCTTTGTGGAGAAGGTCAGACTGGGGAGGCTGAGAAATTGGTGGAAAGGATGAGAGAGGTTGGTCTTTCTCCAGATATTGTAACTTTCAATTGTAGAATTGCTGCCCTCTGTAAATCTGGGCAAATTTTAGAAGCTTCCAGGATTTTTAGAGATATGCAAATAGATGAAGAGTTGGGGTTGCCTCAGCCTAATATTGTAACATATAATTTAATGCTAGAAGGATTTTGTAATGAAGGAATGTTCTTGGAGTCCAAGGCTGTCTTTGATTCTATGAAAAAATCTGAAACTCTTTTGAGCTTGGAGAGCTATAACATATGGTTGTTAGGTTTGGTTAGAAGTGGAAAGCTCCTTGAAGCTCGCTTAGTTCTTTATGAGATGGCAGAAAAGAGTATAAAACCCAATCTTTACTCCTATAACATTTTGGTATATGGACTTTGTAAATATGGGATGTTTTCTGATGCAAGATCTATAATAGGGCTAATGAGAGAGAGTGGTGTTGCCCCAGATACTGTAACTTATAGTACCTTACTGCATGGATACTGCTGTAGAGGAAAGATACTTGAAGCCAATTATGTTCTTCGTGAAATGATGCAAGTTGGTTGTTTTCCAAATATGTATACTTGCAACATTTTGCTTCATAGCCTGTGGAAAGAGGGGAGAGCATCAGAGGCAGAAGAGTTGCTACAAAAGATGAATGAAAGAGGTTATGGCTTGGATAATGTAACTTGTAATACAATGATTAATGGCCTCTGCAAAACTGGGAATCTGGACAAAGCTATTGAAATAGTGAGTGGCATGTGGACCCATGGAAGCGCTTCTCTTGGAAATCTAGGAAACTCTTTTATTGGTCTTTTTGATGCTGGCAATAATGGGAAGAAGTGTTTGCCTGACTCGATCACATATGCAACCATAATAAGTGGGTTATGTAAGGTAGGGCGGGTTGATGAAGCAAAAAAGAAGCTTCTGGAGATGATTGGGAAAAAACTAACTCCTGATTCACTAATATTCGATACTTTCATACATAGTTACTGTAAACAAGGAAAGTTATCATCTGCTTTTAGAGTTCTGAAGGAAATGGAGAAAAAGGGTTGCAACAAGAGTCTTCGAACATACAATTCATTGATTCAGGGTTTAGGTAGTAAAAATCAAATATTTGAAATATATGGGTTGATGGATGAGATGAGAGAAAGAGGAATTTTTCCTAATGTTTACACTTATAATAACATTATTAGCTGCCTATCTGGAAGTGGGAAAATGAAAGATGCCACTTTTCTTTTGGATGAAATGCTGCAGAAGGGGATATCTCCTAATATATATACATTTAGGATTCTAATTGGAGCTTTCTTTCAGGCTTGCGACTTTGGAGCCGCTCAAGAGTTATTTGAGATAGCTTTAAGTCTATGTGGCCACAAGGAATCCTTGTATAGTTTCATGTTCAATGAGCTACTAGCTGGAGGTGAAACTTCCAAGGCTAAAGAGCTCTTTGAAGCTGCATTAGATAGATCTCTAGGCTTGAAAAATTTTCTTTACAAGGACCTGATTGAAAGGCTTTGCAAGGATGAAAAATTAGATGATGCTAGTTTCATTCTTCATAAGATGATGGATAAACAGTATAGGTTTGACCCTGCATCATTCATGCCAGTGATTGATGGATTAGGTAAAAGAGGGAACAAGCATGCAGCTGATGAATTTGCAGAAAGGATGATGGAAATGGCTTCAGAAACCGATGTCAACCAACATGAGAATAAGATTATTCGAGGAAGGTCAAATAATTATGATGAAAGCGATTGGCACAAGATAGTTCACAGGTATGATCCTTCAAGATCATATTTGATGTGGTGCTTACTTATCTCCATATGTTTTGTTGCTCTTTTGAGTATTCATTTAAGCATTGACTATGCAATATGATATATTCAAATTCAGCTCAAGTACTTCCTGATTTCCTGTTTCATATTATATTTTACGAAAAATATAAGATGCTTGGTGGTAGTTTAAATTTTACGTGTAGTTTTGGACCAAGCATTAAATGATTTTATCGAGGAAACTTTTAGCAACCATTTTCTTTACCCATATCTTGCAATTTGTCTTTCCTAAGAGCACCGATGTGTCTGCACAAAACTTTTGAAGAATTATAATTATATATATCTATATATATATATATATATATATATATATCTGTTTAACTCTCTCTACATTAGCCATAAGACGTACTGACATCTAGTTACATGATGCATATCTTTAGGCAATTCTTTTTTCCATCTGCAACACGTGTTTTGAGTATGGTGTCCTTTGAGGGTCTTTTATTGTCACAACATTAATATCTCGAAGTCTTCTGGAGACGGACAACCTAGCCGTTCAATTTCCAGTTATCAATTCAGTTGAACTTTAGGCGAAGAATAGTTAAAATAATGAGGCTATTCATTTAATTAATTTCTTTTGTGTTGTCAATCAATACTTAATTTTCTGTTCTGCGTGTGATGTGTCTGGCTTGGGGCTGCACAACTTCAACAGAAATGATGGCAGTGGAATTGCACAGAAAGCTCTTAAGCGCGTGTTGAAAGGATGGGGTCAAGGAAGTATTTCAACTTCGCAGCCACAGAAATTTAGCACACATGATTACTGGGATGGTGATGCTTAAAGTTTTACAAATTCTTGGGGGACAGGGAAACATGGGAATATGCTAAAAACTGCAGAGGTGCCAAATCTTCAAGTTGGAGCAAAGGACATCAATACATCAGGTAGAACTATTTTTCTAGAATTCATTTTAATCAAGTAAGAAGATAGATAGACAACGATAAACTTTGAGTGTAACAAATGTAGTTTGCTATATTGGTTAATTGTTTCGCCTCTGCATGCTTGCTTAATCAATATAATTATCATGATTGCTATTGATGCTTTTGAGCGTAGTACAAGAAAAGTTCATCTTTGCCTACATTTAAGACTGATACAATGTTTACGGTTATAGAAAGGCTATTTCCATTGTTGATATTGGTCAGGTCTAGCCGTGGACTACATTATCAAGTAAAATAATTCTTCATCTAATTCTTTTACTACAAAATCTCTTTTCTTTAGATTAAAATAGAGTCTTATTAATTTCCAATTACTCTTGAATCTTTAATTAAGGGTTGTACTTAGATCGGAGGTGAATTCAAAATTCTAATTGTATGGTAAGAACTAGGAATAAATGAGATTCCTTTTGAAAGGCTATTGATCTTGTAATTTCTTTGATATTGCAATATAGTTCTATCTTTGTGTTTTCTTTGCGTGTTATTGTGATTTCTTGTTAGGGGTATCCTAACACAAACCTCTAAAACCCCAACTTGGGTGCAGGCTGAACCAACTTTTTCTTCACCAAAAGTGGCTTTCACTTTCAGAGCACCCTCGTCTTGCACTCAGACCATTAAGGGAGATAAATTATCAGGATGTTCACCAAATGATGATGGGGGTTTTTAAATCTCAGAATCTTTGGGTCCTCTTGACATGCTTCATGCAGTTCTACTTCACTACGCACAGATTTAACATTCCAACAGGGTCTTCTCGCATGAATACATTTCCACCATTCAAGGCGTTGAAAGTGATGGCGTGTTGTCTTGCTTCATTGGGGCACTAGCTGCTTGGACCAGAAGTCTGACTACACGAAGAGGTGGGAGGAATTTGCAAGGGCTCTATGGCTGAATAAGTCACTCTCAGCTTGATGGTTTATTTGCCCGTGATGGTCACTCATCTTCATGGATGAATAATGGCCAGTCTCAGGAAAACTGCGAGAAATCAATTGTGGGAAGCTTTTTTAGAAAGACCTAATCTGTATTACACCTTCAGCACCCTTGAACCGAGTCGGTCATGAGCTGGAGTTTCCTTAGAGAATGGCCAACTTTCTTGATCTTTTGAGAAGACCACCTTGTTATCCCGTGTTGCCAATGGTCAGACTGCACGAACAGGAAGTACAGGCAGCCAAGTCAGGTAGCTAGTACACGAAAGTTTACTTGAAAAAAAATATATAAAAATCTCCAGTGGACTCATGCTATAAAAGTTGTGACGTTTATGATCTAAGGTTATGGTTTTTAACAATATTGCAGGGTGAATGGAGAAATAAGGTGAATATCCAGATGGCTCAAAATAACTTTGAAGTATTTAGCATGTTTAGTGAAGATGTTTAAATTCATAGCAGACCATGGCCTAACAGATATACTTTTTTCCAGATTCAAACTACTTTTTCAGTTTAGCCAGGCTATTGTCTTCTAAATCAAGGCATCAATAGTATCAAAATCGATGTCTCGCGTGGGATGAACCATCTGAATGGTGAAGGTGAACTCATTCAACTGATCATCTTCAAAAGATAAGACCGTTTTTGTTAATTAAACAACTCAAAATAATTAAGTATAACGTTTAAGAAAATTTAAAATATTCACAAATGTCAAACGAGAAACTGGAATCTTGAATTATAGGGCCCGTTTGGTAACGTTCTCGTTTCTTGTTTCTTGTTTCCAATTTTATTAAGAAATCTAAGCATTTAATAACTATGTATGTTTCTTGTTTCTCATTTTTTAGAAACACTCCCAAAATTTGTATAGAACTTTTGGGAACAACTAAAACTAGTTTCTTCTTTTTTGTTCTTGTTTCCAATTTTTTCCAAACATAAATAAGATTATAGGTTTATTATTATTGAATGTATAGGTGTTAGAGTCATGGAATTCTATTTTTCTTTATTAAAAATGAAGAAACGGAAACAAGAAACGAGAACGTTATCAAACAGGCCCATAATGGCTGGTTTCCTACCTCTAATACTCTTGGCTGCAACTTTCAGGCTTGTAGCAAAATACTATTGAAGAACTGGCAGGCCGATGGTCTTCTTTGCCTTGATTCATCTCTTCTTGCCAACTTTTCGACCACCTGGGATCTGACGACTATTGTATGGATAAGAATCTCCACCACCCTTAATGTTGCCTTTCGATCTAGATGTTTGTTGAAGGTGATCAAAATCTACAAATACCTGCCCATTTGATATCTCCCCATGAGCAGTACTATCCCAATGATTTGTCACCTTAAACTCTTCCCTTGTTTCTTCAGTTTGATACTCCAAAGACATTGAAACGCTTTGCCTCTCTGTTGAACCTCCATCATGTGTGCATCCCAAGAAGACTGTTTTGGACAAGAATCCTCCATTGAAACTGAGCCCAATCTGTGAGGTTTTTCATTGATCAGTACTCTTCCATTTTTGTTGAATTCATCTTCCATATCTTCGTCCATAACCACGTGCAAACTCCGAGAATTCTGCTGCAAAACGATCGATAATGAATTCAACATCCGCCTTTCTTCATTGTTGTCATGGCAATCCTTTGGCAAGAAACTGACACAAAATCCATTGACACCTTGGTATAATAGCACACTCTGAAGGAGGATGGCCACTGCAGCTGAGAGCCCAAACAATCCAGCGCAAGAGGATGCTCGACAATGATGTCAACTGGAAAGCATGGCTTGTTGGTTGCAATGGTTATTCCAACGATACCGTGGCCATGAGGATGTGATAGGTCGGAGTAGACCTCATGGAAGCCTAATGTGTTGACCTCAGCCATGAAGCAAGCAGTTTCGACAGTCGAAACGCAGTCGAGATAGTTATCAATGTGGCGACAACCAGCTTTGGCTTGCTGGGCACAGGGAGCCCAAGTGGGGGCTAAAGGCAATCTTTGTGTCTTACTAAGAGTGTTCATAAACTCTACTGTCTCCGCCAATGCAGCTTGGTTATAGTTCATTAGAAGCCTGATCATTGGCATATCAAAGAAACCAAAGTTATTATTATCACAAACAAAGTTGTTTTTTTAATTTTACAAAG

mRNA sequence

GCGCTTTCCAACTGAAATTAGAAAACAGAGCTGACACACTCGAAAACCTCGAAAATGGACCGAGCAACGAGGCTCTCAAAAGCCATTTACCTGAATTCCCACAATCCCGAGCTAGCATGGCTTCTCTTCAAGCGAATCCTCTCTTCCCCCATCGCCGCCTCCTCTTCCTTCTTCAAATCCTCTCTTCAATCTGTTCCCGTAATCGCCCGCATCCTCATCACTGCAAAAATGCACCCACAGATCGATCACCTTCACCAACTCCTCTTGTCGCAGCACCGCGATTTTGCTCGTCCATCTGGCTTTTCACTCGTTCGGGCGTTGGCCGATTTGGGTCTTTTCGAAAACGCCATTTCTCAGTTCCGATCGCTTCGAGCCAGGTTTCCTCATGACCCTCCTCCAATTTCTTTCTATAATTTTCTGTTTCGGTGCTCTTTGAAGGAGAGCCGTGTTGATTGTGTGATTTGGCTTTATAAGGATATGGTTGTTGCGAGAGTTAACCCACAGACTTATACTTTTAATCTGTTGATTCGTGCGCTTTGCGAAATGGGGTACTTGGAGAATGCACGAGAAGTGTTTGATAAAATGTCTGAAAAAGGGTGTCAGACTAATGAGTTTAGTCTTGGGATTTTGGTTCGTGGGTATTGTAGAGCTGGGCTCCATTGTCGAGGTGTTGAACTTTTGGACGAGATGAGGAGCTGTGGTACTGTTCCCAATAGGGTTGCGTACAATACTGTGATATCTGCTCTTTGTGGAGAAGGTCAGACTGGGGAGGCTGAGAAATTGGTGGAAAGGATGAGAGAGGTTGGTCTTTCTCCAGATATTGTAACTTTCAATTGTAGAATTGCTGCCCTCTGTAAATCTGGGCAAATTTTAGAAGCTTCCAGGATTTTTAGAGATATGCAAATAGATGAAGAGTTGGGGTTGCCTCAGCCTAATATTGTAACATATAATTTAATGCTAGAAGGATTTTGTAATGAAGGAATGTTCTTGGAGTCCAAGGCTGTCTTTGATTCTATGAAAAAATCTGAAACTCTTTTGAGCTTGGAGAGCTATAACATATGGTTGTTAGGTTTGGTTAGAAGTGGAAAGCTCCTTGAAGCTCGCTTAGTTCTTTATGAGATGGCAGAAAAGAGTATAAAACCCAATCTTTACTCCTATAACATTTTGGTATATGGACTTTGTAAATATGGGATGTTTTCTGATGCAAGATCTATAATAGGGCTAATGAGAGAGAGTGGTGTTGCCCCAGATACTGTAACTTATAGTACCTTACTGCATGGATACTGCTGTAGAGGAAAGATACTTGAAGCCAATTATGTTCTTCGTGAAATGATGCAAGTTGGTTGTTTTCCAAATATGTATACTTGCAACATTTTGCTTCATAGCCTGTGGAAAGAGGGGAGAGCATCAGAGGCAGAAGAGTTGCTACAAAAGATGAATGAAAGAGGTTATGGCTTGGATAATGTAACTTGTAATACAATGATTAATGGCCTCTGCAAAACTGGGAATCTGGACAAAGCTATTGAAATAGTGAGTGGCATGTGGACCCATGGAAGCGCTTCTCTTGGAAATCTAGGAAACTCTTTTATTGGTCTTTTTGATGCTGGCAATAATGGGAAGAAGTGTTTGCCTGACTCGATCACATATGCAACCATAATAAGTGGGTTATGTAAGGTAGGGCGGGTTGATGAAGCAAAAAAGAAGCTTCTGGAGATGATTGGGAAAAAACTAACTCCTGATTCACTAATATTCGATACTTTCATACATAGTTACTGTAAACAAGGAAAGTTATCATCTGCTTTTAGAGTTCTGAAGGAAATGGAGAAAAAGGGTTGCAACAAGAGTCTTCGAACATACAATTCATTGATTCAGGGTTTAGGTAGTAAAAATCAAATATTTGAAATATATGGGTTGATGGATGAGATGAGAGAAAGAGGAATTTTTCCTAATGTTTACACTTATAATAACATTATTAGCTGCCTATCTGGAAGTGGGAAAATGAAAGATGCCACTTTTCTTTTGGATGAAATGCTGCAGAAGGGGATATCTCCTAATATATATACATTTAGGATTCTAATTGGAGCTTTCTTTCAGGCTTGCGACTTTGGAGCCGCTCAAGAGTTATTTGAGATAGCTTTAAGTCTATGTGGCCACAAGGAATCCTTGTATAGTTTCATGTTCAATGAGCTACTAGCTGGAGGTGAAACTTCCAAGGCTAAAGAGCTCTTTGAAGCTGCATTAGATAGATCTCTAGGCTTGAAAAATTTTCTTTACAAGGACCTGATTGAAAGGCTTTGCAAGGATGAAAAATTAGATGATGCTAGTTTCATTCTTCATAAGATGATGGATAAACAGTATAGGTTTGACCCTGCATCATTCATGCCAGTGATTGATGGATTAGGTAAAAGAGGGAACAAGCATGCAGCTGATGAATTTGCAGAAAGGATGATGGAAATGGCTTCAGAAACCGATGTCAACCAACATGAGAATAAGATTATTCGAGGAAGGTCAAATAATTATGATGAAAGCGATTGGCACAAGATAGTTCACAGAAATGATGGCAGTGGAATTGCACAGAAAGCTCTTAAGCGCGTGTTGAAAGGATGGGGTCAAGGAAGTATTTCAACTTCGCAGCCACAGAAATTTAGCACACATGATTACTGGGATGGTGATGCTTAAAGTTTTACAAATTCTTGGGGGACAGGGAAACATGGGAATATGCTAAAAACTGCAGAGGTGCCAAATCTTCAAGTTGGAGCAAAGGACATCAATACATCAGGCTGAACCAACTTTTTCTTCACCAAAAGTGGCTTTCACTTTCAGAGCACCCTCGTCTTGCACTCAGACCATTAAGGGAGATAAATTATCAGGATGTTCACCAAATGATGATGGGGGTTTTTAAATCTCAGAATCTTTGGGTCCTCTTGACATGCTTCATGCAGTTCTACTTCACTACGCACAGATTTAACATTCCAACAGGGTCTTCTCGCATGAATACATTTCCACCATTCAAGGCGTTGAAAGTGATGGCGTGTTGTCTTGCTTCATTGGGGCACTAGCTGCTTGGACCAGAAGTCTGACTACACGAAGAGGTGGGAGGAATTTGCAAGGGCTCTATGGCTGAATAAGTCACTCTCAGCTTGATGGTTTATTTGCCCGTGATGGTCACTCATCTTCATGGATGAATAATGGCCAGTCTCAGGAAAACTGCGAGAAATCAATTGTGGGAAGCTTTTTTAGAAAGACCTAATCTGTATTACACCTTCAGCACCCTTGAACCGAGTCGGTCATGAGCTGGAGTTTCCTTAGAGAATGGCCAACTTTCTTGATCTTTTGAGAAGACCACCTTGTTATCCCGTGTTGCCAATGGTCAGACTGCACGAACAGGAAGTACAGGCAGCCAAGTCAGGGTGAATGGAGAAATAAGATTCAAACTACTTTTTCAGTTTAGCCAGGCTATTGTCTTCTAAATCAAGGCATCAATAGTATCAAAATCGATGTCTCGCGTGGGATGAACCATCTGAATGGTGAAGGCTTGTAGCAAAATACTATTGAAGAACTGGCAGGCCGATGGTCTTCTTTGCCTTGATTCATCTCTTCTTGCCAACTTTTCGACCACCTGGGATCTGACGACTATTGTATGGATAAGAATCTCCACCACCCTTAATGTTGCCTTTCGATCTAGATGTTTGTTGAAGTTTGATACTCCAAAGACATTGAAACGCTTTGCCTCTCTGTTGAACCTCCATCATGTGTGCATCCCAAGAAGACTGTTTTGGACAAGAATCCTCCATTGAAACTGAGCCCAATCTGTGAGGTTTTTCATTGATCAGTACTCTTCCATTTTTGTTGAATTCATCTTCCATATCTTCGTCCATAACCACGTGCAAACTCCGAGAATTCTGCTGCAAAACGATCGATAATGAATTCAACATCCGCCTTTCTTCATTGTTGTCATGGCAATCCTTTGGCAAGAAACTGACACAAAATCCATTGACACCTTGGTATAATAGCACACTCTGAAGGAGGATGGCCACTGCAGCTGAGAGCCCAAACAATCCAGCGCAAGAGGATGCTCGACAATGATGTCAACTGGAAAGCATGGCTTGTTGGTTGCAATGGTTATTCCAACGATACCGTGGCCATGAGGATGTGATAGGTCGGAGTAGACCTCATGGAAGCCTAATGTGTTGACCTCAGCCATGAAGCAAGCAGTTTCGACAGTCGAAACGCAGTCGAGATAGTTATCAATGTGGCGACAACCAGCTTTGGCTTGCTGGGCACAGGGAGCCCAAGTGGGGGCTAAAGGCAATCTTTGTGTCTTACTAAGAGTGTTCATAAACTCTACTGTCTCCGCCAATGCAGCTTGGTTATAGTTCATTAGAAGCCTGATCATTGGCATATCAAAGAAACCAAAGTTATTATTATCACAAACAAAGTTGTTTTTTTAATTTTACAAAG

Coding sequence (CDS)

ATGGACCGAGCAACGAGGCTCTCAAAAGCCATTTACCTGAATTCCCACAATCCCGAGCTAGCATGGCTTCTCTTCAAGCGAATCCTCTCTTCCCCCATCGCCGCCTCCTCTTCCTTCTTCAAATCCTCTCTTCAATCTGTTCCCGTAATCGCCCGCATCCTCATCACTGCAAAAATGCACCCACAGATCGATCACCTTCACCAACTCCTCTTGTCGCAGCACCGCGATTTTGCTCGTCCATCTGGCTTTTCACTCGTTCGGGCGTTGGCCGATTTGGGTCTTTTCGAAAACGCCATTTCTCAGTTCCGATCGCTTCGAGCCAGGTTTCCTCATGACCCTCCTCCAATTTCTTTCTATAATTTTCTGTTTCGGTGCTCTTTGAAGGAGAGCCGTGTTGATTGTGTGATTTGGCTTTATAAGGATATGGTTGTTGCGAGAGTTAACCCACAGACTTATACTTTTAATCTGTTGATTCGTGCGCTTTGCGAAATGGGGTACTTGGAGAATGCACGAGAAGTGTTTGATAAAATGTCTGAAAAAGGGTGTCAGACTAATGAGTTTAGTCTTGGGATTTTGGTTCGTGGGTATTGTAGAGCTGGGCTCCATTGTCGAGGTGTTGAACTTTTGGACGAGATGAGGAGCTGTGGTACTGTTCCCAATAGGGTTGCGTACAATACTGTGATATCTGCTCTTTGTGGAGAAGGTCAGACTGGGGAGGCTGAGAAATTGGTGGAAAGGATGAGAGAGGTTGGTCTTTCTCCAGATATTGTAACTTTCAATTGTAGAATTGCTGCCCTCTGTAAATCTGGGCAAATTTTAGAAGCTTCCAGGATTTTTAGAGATATGCAAATAGATGAAGAGTTGGGGTTGCCTCAGCCTAATATTGTAACATATAATTTAATGCTAGAAGGATTTTGTAATGAAGGAATGTTCTTGGAGTCCAAGGCTGTCTTTGATTCTATGAAAAAATCTGAAACTCTTTTGAGCTTGGAGAGCTATAACATATGGTTGTTAGGTTTGGTTAGAAGTGGAAAGCTCCTTGAAGCTCGCTTAGTTCTTTATGAGATGGCAGAAAAGAGTATAAAACCCAATCTTTACTCCTATAACATTTTGGTATATGGACTTTGTAAATATGGGATGTTTTCTGATGCAAGATCTATAATAGGGCTAATGAGAGAGAGTGGTGTTGCCCCAGATACTGTAACTTATAGTACCTTACTGCATGGATACTGCTGTAGAGGAAAGATACTTGAAGCCAATTATGTTCTTCGTGAAATGATGCAAGTTGGTTGTTTTCCAAATATGTATACTTGCAACATTTTGCTTCATAGCCTGTGGAAAGAGGGGAGAGCATCAGAGGCAGAAGAGTTGCTACAAAAGATGAATGAAAGAGGTTATGGCTTGGATAATGTAACTTGTAATACAATGATTAATGGCCTCTGCAAAACTGGGAATCTGGACAAAGCTATTGAAATAGTGAGTGGCATGTGGACCCATGGAAGCGCTTCTCTTGGAAATCTAGGAAACTCTTTTATTGGTCTTTTTGATGCTGGCAATAATGGGAAGAAGTGTTTGCCTGACTCGATCACATATGCAACCATAATAAGTGGGTTATGTAAGGTAGGGCGGGTTGATGAAGCAAAAAAGAAGCTTCTGGAGATGATTGGGAAAAAACTAACTCCTGATTCACTAATATTCGATACTTTCATACATAGTTACTGTAAACAAGGAAAGTTATCATCTGCTTTTAGAGTTCTGAAGGAAATGGAGAAAAAGGGTTGCAACAAGAGTCTTCGAACATACAATTCATTGATTCAGGGTTTAGGTAGTAAAAATCAAATATTTGAAATATATGGGTTGATGGATGAGATGAGAGAAAGAGGAATTTTTCCTAATGTTTACACTTATAATAACATTATTAGCTGCCTATCTGGAAGTGGGAAAATGAAAGATGCCACTTTTCTTTTGGATGAAATGCTGCAGAAGGGGATATCTCCTAATATATATACATTTAGGATTCTAATTGGAGCTTTCTTTCAGGCTTGCGACTTTGGAGCCGCTCAAGAGTTATTTGAGATAGCTTTAAGTCTATGTGGCCACAAGGAATCCTTGTATAGTTTCATGTTCAATGAGCTACTAGCTGGAGGTGAAACTTCCAAGGCTAAAGAGCTCTTTGAAGCTGCATTAGATAGATCTCTAGGCTTGAAAAATTTTCTTTACAAGGACCTGATTGAAAGGCTTTGCAAGGATGAAAAATTAGATGATGCTAGTTTCATTCTTCATAAGATGATGGATAAACAGTATAGGTTTGACCCTGCATCATTCATGCCAGTGATTGATGGATTAGGTAAAAGAGGGAACAAGCATGCAGCTGATGAATTTGCAGAAAGGATGATGGAAATGGCTTCAGAAACCGATGTCAACCAACATGAGAATAAGATTATTCGAGGAAGGTCAAATAATTATGATGAAAGCGATTGGCACAAGATAGTTCACAGAAATGATGGCAGTGGAATTGCACAGAAAGCTCTTAAGCGCGTGTTGAAAGGATGGGGTCAAGGAAGTATTTCAACTTCGCAGCCACAGAAATTTAGCACACATGATTACTGGGATGGTGATGCTTAA

Protein sequence

MDRATRLSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMHPQIDHLHQLLLSQHRDFARPSGFSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYNFLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEKGCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEAEKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNLMLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKSIKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEANYVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGLCKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCKVGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEMLQKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSKAKELFEAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVIDGLGKRGNKHAADEFAERMMEMASETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIAQKALKRVLKGWGQGSISTSQPQKFSTHDYWDGDA
Homology
[Close]
BLAST of Lcy08g004030 vs. ExPASy Swiss-Prot
Match: Q0WPZ6 (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX=3702 GN=At2g17140 PE=2 SV=1)

HSP 1 Score: 1026.9 bits (2654), Expect = 1.3e-298
Identity = 507/872 (58.14%), Postives = 644/872 (73.85%), Query Frame = 0 

Query: 7   LSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMHPQIDHL 66
           L KA+  N++NP LAW +FKRI SSP   S      SL + P IARIL+ AKMH +I  L
Sbjct: 5   LVKALLKNTNNPRLAWRIFKRIFSSPSEESHGI---SLDATPTIARILVRAKMHEEIQEL 64

Query: 67  HQLLLSQHRDFARPSG-FSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYNFLFRC 126
           H L+LS      + S   S+V   A     + A  QF+ +R+RFP + P +  YN L   
Sbjct: 65  HNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLES 124

Query: 127 SLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEKGCQTN 186
            +KE RV+ V WLYKDMV+  + PQTYTFNLLIRALC+   ++ ARE+FD+M EKGC+ N
Sbjct: 125 CIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPN 184

Query: 187 EFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEAEKLVE 246
           EF+ GILVRGYC+AGL  +G+ELL+ M S G +PN+V YNT++S+ C EG+  ++EK+VE
Sbjct: 185 EFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVE 244

Query: 247 RMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNLMLEGF 306
           +MRE GL PDIVTFN RI+ALCK G++L+ASRIF DM++DE LGLP+PN +TYNLML+GF
Sbjct: 245 KMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGF 304

Query: 307 CNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKSIKPNL 366
           C  G+  ++K +F+S+++++ L SL+SYNIWL GLVR GK +EA  VL +M +K I P++
Sbjct: 305 CKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSI 364

Query: 367 YSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEANYVLRE 426
           YSYNIL+ GLCK GM SDA++I+GLM+ +GV PD VTY  LLHGYC  GK+  A  +L+E
Sbjct: 365 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 424

Query: 427 MMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGLCKTGN 486
           MM+  C PN YTCNILLHSLWK GR SEAEELL+KMNE+GYGLD VTCN +++GLC +G 
Sbjct: 425 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 484

Query: 487 LDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCKVGRVD 546
           LDKAIEIV GM  HGSA+LGNLGNS+IGL D       CLPD ITY+T+++GLCK GR  
Sbjct: 485 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 544

Query: 547 EAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606
           EAK    EM+G+KL PDS+ ++ FIH +CKQGK+SSAFRVLK+MEKKGC+KSL TYNSLI
Sbjct: 545 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 604

Query: 607 QGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEMLQKGIS 666
            GLG KNQIFEI+GLMDEM+E+GI PN+ TYN  I  L    K++DAT LLDEM+QK I+
Sbjct: 605 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA 664

Query: 667 PNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSKAKELF 726
           PN+++F+ LI AF +  DF  AQE+FE A+S+CG KE LYS MFNELLA G+  KA EL 
Sbjct: 665 PNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELL 724

Query: 727 EAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVIDGLGKR 786
           EA LDR   L  FLYKDL+E LCK ++L+ AS ILHKM+D+ Y FDPA+ MPVIDGLGK 
Sbjct: 725 EAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKM 784

Query: 787 GNKHAADEFAERMMEMAS----ETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIAQ 846
           GNK  A+ FA++MMEMAS       V+ +   I + + N    ++W  I+HR+DGSGIA 
Sbjct: 785 GNKKEANSFADKMMEMASVGEVANKVDPNARDIHQKKHNKNGGNNWQNILHRDDGSGIAL 844

Query: 847 KALKRVLKGWGQGSISTSQPQKFSTHDYWDGD 874
           ++L RV KGWGQG IS+ QP +    DYW+ D
Sbjct: 845 RSLSRVKKGWGQGDISSFQPPRVDYLDYWEDD 873

[Close]
BLAST of Lcy08g004030 vs. ExPASy Swiss-Prot
Match: Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.8e-75
Identity = 169/526 (32.13%), Postives = 273/526 (51.90%), Query Frame = 0 

Query: 155 NLLIRALCEMGYLENAREVFDKMSEKGCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRS 214
           N LI +L  +G++E A  V+ ++S  G   N ++L I+V   C+ G   +    L +++ 
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263

Query: 215 CGTVPNRVAYNTVISALCGEGQTGEAEKLVERMREVGLSPDIVTFNCRIAALCKSGQILE 274
            G  P+ V YNT+ISA   +G   EA +L+  M   G SP + T+N  I  LCK G+   
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323

Query: 275 ASRIFRDMQIDEELGLPQPNIVTYNLMLEGFCNEGMFLESKAVFDSMKKSETLLSLESYN 334
           A  +F +M      GL  P+  TY  +L   C +G  +E++ VF  M+  + +  L  ++
Sbjct: 324 AKEVFAEML---RSGL-SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 383

Query: 335 IWLLGLVRSGKLLEARLVLYEMAEKSIKPNLYSYNILVYGLCKYGMFSDARSIIGLMRES 394
             +    RSG L +A +    + E  + P+   Y IL+ G C+ GM S A ++   M + 
Sbjct: 384 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 443

Query: 395 GVAPDTVTYSTLLHGYCCRGKILEANYVLREMMQVGCFPNMYTCNILLHSLWKEGRASEA 454
           G A D VTY+T+LHG C R  + EA+ +  EM +   FP+ YT  IL+    K G    A
Sbjct: 444 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 503

Query: 455 EELLQKMNERGYGLDNVTCNTMINGLCKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGL 514
            EL QKM E+   LD VT NT+++G  K G++D A EI + M +                
Sbjct: 504 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS---------------- 563

Query: 515 FDAGNNGKKCLPDSITYATIISGLCKVGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYC 574
                  K+ LP  I+Y+ +++ LC  G + EA +   EMI K + P  +I ++ I  YC
Sbjct: 564 -------KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 623

Query: 575 KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSKNQIFEIYGLMDEMRER--GIFPN 634
           + G  S     L++M  +G      +YN+LI G   +  + + +GL+ +M E   G+ P+
Sbjct: 624 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 683

Query: 635 VYTYNNIISCLSGSGKMKDATFLLDEMLQKGISPNIYTFRILIGAF 679
           V+TYN+I+       +MK+A  +L +M+++G++P+  T+  +I  F
Sbjct: 684 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702

[Close]
BLAST of Lcy08g004030 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.4e-74
Identity = 168/563 (29.84%), Postives = 278/563 (49.38%), Query Frame = 0 

Query: 114 PPISFYNFLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREV 173
           P    YN +    +  +       ++ DM+  ++ P  +TF ++++A C +  +++A  +
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239

Query: 174 FDKMSEKGCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCG 233
              M++ GC  N      L+    +       ++LL+EM   G VP+   +N VI  LC 
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 234 EGQTGEAEKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQP 293
             +  EA K+V RM   G +PD +T+   +  LCK G++  A  +F          +P+P
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--------YRIPKP 359

Query: 294 NIVTYNLMLEGFCNEGMFLESKAVFDSMKKSETLL-SLESYNIWLLGLVRSGKLLEARLV 353
            IV +N ++ GF   G   ++KAV   M  S  ++  + +YN  + G  + G +  A  V
Sbjct: 360 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 419

Query: 354 LYEMAEKSIKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCC 413
           L++M  K  KPN+YSY ILV G CK G   +A +++  M   G+ P+TV ++ L+  +C 
Sbjct: 420 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 479

Query: 414 RGKILEANYVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVT 473
             +I EA  + REM + GC P++YT N L+  L +      A  LL+ M   G   + VT
Sbjct: 480 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 539

Query: 474 CNTMINGLCKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYA 533
            NT+IN   + G + +A ++V+ M   GS                         D ITY 
Sbjct: 540 YNTLINAFLRRGEIKEARKLVNEMVFQGSPL-----------------------DEITYN 599

Query: 534 TIISGLCKVGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKK 593
           ++I GLC+ G VD+A+    +M+     P ++  +  I+  C+ G +  A    KEM  +
Sbjct: 600 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 659

Query: 594 GCNKSLRTYNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDA 653
           G    + T+NSLI GL    +I +   +  +++  GI P+  T+N ++S L   G + DA
Sbjct: 660 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 711

Query: 654 TFLLDEMLQKGISPNIYTFRILI 676
             LLDE ++ G  PN  T+ IL+
Sbjct: 720 CLLLDEGIEDGFVPNHRTWSILL 711

[Close]
BLAST of Lcy08g004030 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.9e-72
Identity = 195/691 (28.22%), Postives = 323/691 (46.74%), Query Frame = 0 

Query: 83  FSLVRALADLGLFE--NAISQF-RSLRARFPHDPPPISFYNFLFRCSLKESRVDCVIWLY 142
           + L RALAD+       A+S++ R  RA      P +  Y  L  C  +  R+D      
Sbjct: 51  YGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAAL 110

Query: 143 KDMVVARVNPQTYTFNLLIRALCEMGYLENARE-VFDKMSEKGCQTNEFSLGILVRGYCR 202
            +++          F  L++ LC      +A + V  +M+E GC  N FS  IL++G C 
Sbjct: 111 GNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCD 170

Query: 203 AGLHCRGVELLDEM---RSCGTVPNRVAYNTVISALCGEGQTGEAEKLVERMREVGLSPD 262
                  +ELL  M   R  G+ P+ V+Y TVI+    EG + +A      M + G+ PD
Sbjct: 171 ENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPD 230

Query: 263 IVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNLMLEGFCNEGMFLESK 322
           +VT+N  IAALCK+  + +A  +   M  +  +    P+ +TYN +L G+C+ G   E+ 
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM----PDCMTYNSILHGYCSSGQPKEAI 290

Query: 323 AVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKSIKPNLYSYNILVYGL 382
                M+       + +Y++ +  L ++G+ +EAR +   M ++ +KP + +Y  L+ G 
Sbjct: 291 GFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGY 350

Query: 383 CKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEANYVLREMMQVGCFPNM 442
              G   +   ++ LM  +G+ PD   +S L+  Y  +GK+ +A  V  +M Q G  PN 
Sbjct: 351 ATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNA 410

Query: 443 YTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGLCKTGNLDKAIEIVSG 502
            T   ++  L K GR  +A    ++M + G    N+  N++I+GLC     ++A E++  
Sbjct: 411 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 470

Query: 503 MWTHGSASLGNLGNSFIG-------------LFD-AGNNGKKCLPDSITYATIISGLCKV 562
           M   G        NS I              LF+     G K  P+ ITY T+I+G C  
Sbjct: 471 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK--PNVITYNTLINGYCLA 530

Query: 563 GRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRTY 622
           G++DEA K L  M+   L P+++ + T I+ YCK  ++  A  + KEME  G +  + TY
Sbjct: 531 GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 590

Query: 623 NSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEMLQ 682
           N ++QGL    +      L   + E G    + TYN I+  L  +    DA  +   +  
Sbjct: 591 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCL 650

Query: 683 KGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKES--LYSFMFNELLAGGETS 742
             +     TF I+I A  +      A++LF +A S  G   +   Y  M   ++  G   
Sbjct: 651 MDLKLEARTFNIMIDALLKVGRNDEAKDLF-VAFSSNGLVPNYWTYRLMAENIIGQGLLE 710

Query: 743 KAKELFEAALDRSL----GLKNFLYKDLIER 747
           +  +LF +  D       G+ NF+ ++L++R
Sbjct: 711 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 734

[Close]
BLAST of Lcy08g004030 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.8e-72
Identity = 173/616 (28.08%), Postives = 303/616 (49.19%), Query Frame = 0 

Query: 119 YNFLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMS 178
           Y    R  L + + D  I L++DM+ +R  P    F+ L  A+ +    +    +  +M 
Sbjct: 56  YRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME 115

Query: 179 EKGCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTG 238
            KG   N ++L I++  +CR    C     + ++   G  PN + ++T+I+ LC EG+  
Sbjct: 116 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175

Query: 239 EAEKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTY 298
           EA +LV+RM E+G  PD++T N  +  LC SG+  EA  +   M    E G  QPN VTY
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM---VEYGC-QPNAVTY 235

Query: 299 NLMLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAE 358
             +L   C  G               +T L++E                    +L +M E
Sbjct: 236 GPVLNVMCKSG---------------QTALAME--------------------LLRKMEE 295

Query: 359 KSIKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILE 418
           ++IK +   Y+I++ GLCK+G   +A ++   M   G+  + +TY+ L+ G+C  G+  +
Sbjct: 296 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 355

Query: 419 ANYVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMIN 478
              +LR+M++    PN+ T ++L+ S  KEG+  EAEEL ++M  RG   D +T  ++I+
Sbjct: 356 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 415

Query: 479 GLCKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGN------------NGKKCLP 538
           G CK  +LDKA ++V  M + G        N  I  +   N            + +  + 
Sbjct: 416 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 475

Query: 539 DSITYATIISGLCKVGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVL 598
           D++TY T+I G C++G+++ AK+   EM+ +K+ P+ + +   +   C  G+   A  + 
Sbjct: 476 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 535

Query: 599 KEMEKKGCNKSLRTYNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGS 658
           +++EK      +  YN +I G+ + +++ + + L   +  +G+ P V TYN +I  L   
Sbjct: 536 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 595

Query: 659 GKMKDATFLLDEMLQKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYS 718
           G + +A  L  +M + G +P+ +T+ ILI A     D   + +L E  L  CG      +
Sbjct: 596 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE-ELKRCGFSVDAST 631

Query: 719 F-MFNELLAGGETSKA 722
             M  ++L+ G   K+
Sbjct: 656 IKMVIDMLSDGRLKKS 631

[Close]
BLAST of Lcy08g004030 vs. ExPASy TrEMBL
Match: A0A6J1GJU0 (pentatricopeptide repeat-containing protein At2g17140 OS=Cucurbita moschata OX=3662 GN=LOC111454966 PE=4 SV=1)

HSP 1 Score: 1626.7 bits (4211), Expect = 0.0e+00
Identity = 798/872 (91.51%), Postives = 835/872 (95.76%), Query Frame = 0 

Query: 1   MDRATRLSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMH 60
           MDRA  LSKA+YLNS +PELAWLLFKR+LSSPI+ASSSFFK+SLQS+P+IARIL TAKMH
Sbjct: 1   MDRAAMLSKAVYLNSKSPELAWLLFKRVLSSPISASSSFFKTSLQSIPLIARILTTAKMH 60

Query: 61  PQIDHLHQLLLSQHRDFARPSGFSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYN 120
           PQIDHLHQLLLSQHRDFA PSGF+LVRALADLGLFENAISQFRSLRARFP+DPP ISFYN
Sbjct: 61  PQIDHLHQLLLSQHRDFAHPSGFALVRALADLGLFENAISQFRSLRARFPNDPPDISFYN 120

Query: 121 FLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180
           FLFRCSLKESRVD VIWLYKDMV ARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK
Sbjct: 121 FLFRCSLKESRVDFVIWLYKDMVFARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180

Query: 181 GCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEA 240
           GC+ NEFSLG++VRGYCRAGLH RG+ELLDEMRS G +PNRVAYNTVIS+LCGEGQTGEA
Sbjct: 181 GCKPNEFSLGLIVRGYCRAGLHDRGIELLDEMRSSGALPNRVAYNTVISSLCGEGQTGEA 240

Query: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNL 300
           EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPN +TYNL
Sbjct: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNTITYNL 300

Query: 301 MLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKS 360
           MLEGFCNEGMF ESKA+FDSMKKSET L++ESYNIWLLGLVRSGKLLEARL+L EMAEKS
Sbjct: 301 MLEGFCNEGMFEESKALFDSMKKSETHLTMESYNIWLLGLVRSGKLLEARLILNEMAEKS 360

Query: 361 IKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEAN 420
           IKPNLYSYNIL+YGLCKYGMFSDARSIIGLMRESGVAPDTV+YSTLLHGYCCRGKILEAN
Sbjct: 361 IKPNLYSYNILIYGLCKYGMFSDARSIIGLMRESGVAPDTVSYSTLLHGYCCRGKILEAN 420

Query: 421 YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL 480
           YVLREM QVGCFPNMYTCNILLHSLWKEG+ASEAEELLQKMNERGYGL+NVTCNT+INGL
Sbjct: 421 YVLREMTQVGCFPNMYTCNILLHSLWKEGKASEAEELLQKMNERGYGLNNVTCNTVINGL 480

Query: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCK 540
           CK+GNLDKAIEIVSGMW HGSASLGNLGNSFIGLFD GNNG KCLPDSITYATIIS LCK
Sbjct: 481 CKSGNLDKAIEIVSGMWNHGSASLGNLGNSFIGLFDIGNNGMKCLPDSITYATIISWLCK 540

Query: 541 VGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600
            GRVDEAKKKLLEMIGKKL+PDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT
Sbjct: 541 AGRVDEAKKKLLEMIGKKLSPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600

Query: 601 YNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEML 660
           YNSLIQGL SKNQIFEIYGLM+EM+E+GIFPNVYTYNNIISCLS  GK+KDAT LLDEML
Sbjct: 601 YNSLIQGLSSKNQIFEIYGLMEEMKEKGIFPNVYTYNNIISCLSEGGKLKDATSLLDEML 660

Query: 661 QKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSK 720
           QKGISPNIYTFRILIGAFF+ACDFGAAQELFEIALSLCGHKESLYSFMFNELL GGETSK
Sbjct: 661 QKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLTGGETSK 720

Query: 721 AKELFEAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVID 780
           AKELFEAALDRSL LKNFLY+DLIERLCKD KLDDASFILH MMDKQYRFDPAS MPVID
Sbjct: 721 AKELFEAALDRSLALKNFLYRDLIERLCKDGKLDDASFILHTMMDKQYRFDPASLMPVID 780

Query: 781 GLGKRGNKHAADEFAERMMEMASETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIA 840
           GLGK GNKHAADEFAE+MMEMASETD+N+HENK+ RGRSNN DE DWHKIVHRNDGSGIA
Sbjct: 781 GLGKSGNKHAADEFAEKMMEMASETDINRHENKLSRGRSNNDDERDWHKIVHRNDGSGIA 840

Query: 841 QKALKRVLKGWGQGSISTSQPQKFSTHDYWDG 873
           QK LKRVLKGWGQGSISTSQPQKFSTHD WDG
Sbjct: 841 QKTLKRVLKGWGQGSISTSQPQKFSTHDCWDG 872

[Close]
BLAST of Lcy08g004030 vs. ExPASy TrEMBL
Match: A0A6J1HUZ1 (pentatricopeptide repeat-containing protein At2g17140 OS=Cucurbita maxima OX=3661 GN=LOC111468115 PE=4 SV=1)

HSP 1 Score: 1619.8 bits (4193), Expect = 0.0e+00
Identity = 797/874 (91.19%), Postives = 834/874 (95.42%), Query Frame = 0 

Query: 1   MDRATRLSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMH 60
           M+RA  LSKA+YLNS +PELAWLLFKR+LSSPI+ASSSFF++SLQS+P+IARIL TAKMH
Sbjct: 1   MERAAMLSKAVYLNSKSPELAWLLFKRVLSSPISASSSFFETSLQSIPLIARILTTAKMH 60

Query: 61  PQIDHLHQLLLSQHRDFARPSGFSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYN 120
           PQIDHL+QLLLSQHRDFA PSGF+LVRALADLGLFENAISQFRSLR RFP+DPP ISFYN
Sbjct: 61  PQIDHLYQLLLSQHRDFAHPSGFALVRALADLGLFENAISQFRSLRDRFPNDPPDISFYN 120

Query: 121 FLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180
           FL RCSLKESRVD VIWLYKDMV A VNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK
Sbjct: 121 FLLRCSLKESRVDFVIWLYKDMVFAGVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180

Query: 181 GCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEA 240
           GC  NEFSLG+LVRGYCRAGLH RG+ELLDEMRS G VPNRVAYNTVIS+LCGEGQTGEA
Sbjct: 181 GCNPNEFSLGLLVRGYCRAGLHYRGIELLDEMRSSGAVPNRVAYNTVISSLCGEGQTGEA 240

Query: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNL 300
           EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPN +TYNL
Sbjct: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNTITYNL 300

Query: 301 MLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKS 360
           MLEGFCNEGMF ESKA+FDSMKKSET L++ESYNIWLLGLVRSGKLLEARL+L EM EKS
Sbjct: 301 MLEGFCNEGMFEESKALFDSMKKSETHLTMESYNIWLLGLVRSGKLLEARLILNEMVEKS 360

Query: 361 IKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEAN 420
           IKPNLYSYNIL+YGLCKYGMFSDARSIIGLMR+SGVAPDTV+YSTLLHGYCCRGKILE+N
Sbjct: 361 IKPNLYSYNILIYGLCKYGMFSDARSIIGLMRDSGVAPDTVSYSTLLHGYCCRGKILESN 420

Query: 421 YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL 480
           YVLREM+QVGCFPNMYTCNILLHSLWKEG+ASEAEELLQKMNERGYGLDNVTCNT+INGL
Sbjct: 421 YVLREMIQVGCFPNMYTCNILLHSLWKEGKASEAEELLQKMNERGYGLDNVTCNTVINGL 480

Query: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCK 540
           CK+GNLDKAIEIVSGMWTHGSASLGNLGNSFI LFD GNNG KCLPDSITYATIIS LCK
Sbjct: 481 CKSGNLDKAIEIVSGMWTHGSASLGNLGNSFICLFDIGNNGMKCLPDSITYATIISWLCK 540

Query: 541 VGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600
            GRVDEAKKKLLEMIGKKL+PDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT
Sbjct: 541 AGRVDEAKKKLLEMIGKKLSPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600

Query: 601 YNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEML 660
           YNSLIQGL SKNQIFEIYGLM+EM+E+GIFPNVYTYNNIISCLS  GK+KDAT LLDEML
Sbjct: 601 YNSLIQGLSSKNQIFEIYGLMEEMKEKGIFPNVYTYNNIISCLSEGGKLKDATSLLDEML 660

Query: 661 QKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSK 720
           QKGISPNIYTFRILIGAFF+ACDFGAAQELFEIALSLCGHKESLYSFMFNELL GGETSK
Sbjct: 661 QKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLTGGETSK 720

Query: 721 AKELFEAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVID 780
           AKELFEAALDRSL LKNFLY+DLIERLCKD KLDDASFILHKMMDKQYRFDPASFM VID
Sbjct: 721 AKELFEAALDRSLALKNFLYRDLIERLCKDGKLDDASFILHKMMDKQYRFDPASFMSVID 780

Query: 781 GLGKRGNKHAADEFAERMMEMASETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIA 840
           GLGK GNKHAADEFAE+MMEMASETD+NQHENKIIRGRSNN DE DWHKIVHRNDGSGIA
Sbjct: 781 GLGKSGNKHAADEFAEKMMEMASETDINQHENKIIRGRSNNDDERDWHKIVHRNDGSGIA 840

Query: 841 QKALKRVLKGWGQGSISTSQPQKFSTHDYWDGDA 875
           QK LKRVLKGWGQGSISTSQPQKFSTHD WDG A
Sbjct: 841 QKTLKRVLKGWGQGSISTSQPQKFSTHDCWDGVA 874

[Close]
BLAST of Lcy08g004030 vs. ExPASy TrEMBL
Match: A0A6J1C3B0 (pentatricopeptide repeat-containing protein At2g17140 OS=Momordica charantia OX=3673 GN=LOC111007553 PE=4 SV=1)

HSP 1 Score: 1609.3 bits (4166), Expect = 0.0e+00
Identity = 792/874 (90.62%), Postives = 831/874 (95.08%), Query Frame = 0 

Query: 1   MDRATRLSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMH 60
           MDRATRLSKAIYLNS+NP+LAWLLFKRILSSPIAASSSFFK+SLQS+P IARILITAKMH
Sbjct: 1   MDRATRLSKAIYLNSNNPKLAWLLFKRILSSPIAASSSFFKTSLQSLPAIARILITAKMH 60

Query: 61  PQIDHLHQLLLSQHRDFARPSGFSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYN 120
           P+IDHLHQLLLSQHRDFA PSGFSLV++LA  GLFE+ ISQF+SLR RFP DPP ISFYN
Sbjct: 61  PEIDHLHQLLLSQHRDFAHPSGFSLVQSLAGSGLFESVISQFQSLRTRFPDDPPAISFYN 120

Query: 121 FLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180
           FLFRCSLKESRVD VIWLYKDMVVARV PQTYTFNLLI ALCEMG+LENAREVFDKMSEK
Sbjct: 121 FLFRCSLKESRVDFVIWLYKDMVVARVKPQTYTFNLLILALCEMGHLENAREVFDKMSEK 180

Query: 181 GCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEA 240
           GC+ NEFSLGILVRGYCRAGLH RG+ELLDE+ S GT+PNRV YNTVISA+CGEGQT EA
Sbjct: 181 GCEPNEFSLGILVRGYCRAGLHYRGIELLDELTSSGTLPNRVVYNTVISAVCGEGQTAEA 240

Query: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNL 300
           EKLVERMR+ GLSPDIVTFNCRIAALCKSGQILEA RIFRDMQIDEELGLPQPNIVTYNL
Sbjct: 241 EKLVERMRDAGLSPDIVTFNCRIAALCKSGQILEACRIFRDMQIDEELGLPQPNIVTYNL 300

Query: 301 MLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKS 360
           MLEGFCNEGM  ESKA+FDSMK+S T LSLESYNIWLLGLVRSG+LLEARL+L EMAEKS
Sbjct: 301 MLEGFCNEGMLEESKALFDSMKRSATFLSLESYNIWLLGLVRSGQLLEARLILNEMAEKS 360

Query: 361 IKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEAN 420
           IKPNLYSYNIL+YGLCKYGMFSDARSI+GLMRESG+APDTVTYSTLLHGYCCRGKI++AN
Sbjct: 361 IKPNLYSYNILIYGLCKYGMFSDARSILGLMRESGLAPDTVTYSTLLHGYCCRGKIVKAN 420

Query: 421 YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL 480
           YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNER YGLDNVTCNTMINGL
Sbjct: 421 YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERNYGLDNVTCNTMINGL 480

Query: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCK 540
           CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFD GN+GKKC+PDS+TYATIISGLCK
Sbjct: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDVGNSGKKCMPDSVTYATIISGLCK 540

Query: 541 VGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600
           VGR+DEAKKKLLEMIGK L+PDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT
Sbjct: 541 VGRIDEAKKKLLEMIGKGLSPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600

Query: 601 YNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEML 660
           YNSLI+GLGS NQIFEIYGLMDEMRE GI PN+YTYNNII CLS  GK+KDAT LLDEML
Sbjct: 601 YNSLIEGLGS-NQIFEIYGLMDEMRESGISPNIYTYNNIIRCLSEGGKVKDATSLLDEML 660

Query: 661 QKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSK 720
           QKGI PN+YTFRILIGAF +ACDFGAAQ+LFEIALSLCGHKESLYSFMFNELLAGGET K
Sbjct: 661 QKGIYPNVYTFRILIGAFLKACDFGAAQDLFEIALSLCGHKESLYSFMFNELLAGGETFK 720

Query: 721 AKELFEAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVID 780
           AKELFEAALDRSL LKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFD ASFMPVID
Sbjct: 721 AKELFEAALDRSLALKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDHASFMPVID 780

Query: 781 GLGKRGNKHAADEFAERMMEMASETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIA 840
           GLGKRGNKHAADEFAE+MMEMASETD +QHENKIIR RSNNYDE DWHKIVHRNDGSGIA
Sbjct: 781 GLGKRGNKHAADEFAEKMMEMASETDPSQHENKIIRRRSNNYDEGDWHKIVHRNDGSGIA 840

Query: 841 QKALKRVLKGWGQGSISTSQPQKFSTHDYWDGDA 875
           QKALKRVLKGWGQGSI+T QPQKFSTHDYWDGDA
Sbjct: 841 QKALKRVLKGWGQGSITTLQPQKFSTHDYWDGDA 873

[Close]
BLAST of Lcy08g004030 vs. ExPASy TrEMBL
Match: A0A0A0K4X0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G024100 PE=4 SV=1)

HSP 1 Score: 1598.9 bits (4139), Expect = 0.0e+00
Identity = 791/874 (90.50%), Postives = 825/874 (94.39%), Query Frame = 0 

Query: 1   MDRATRLSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMH 60
           MDRA +LSKAIYLNS+NP LAWLLFKRILSSPI ASSSFFK SLQSVP IARILITAKMH
Sbjct: 3   MDRAAKLSKAIYLNSNNPNLAWLLFKRILSSPIPASSSFFKPSLQSVPAIARILITAKMH 62

Query: 61  PQIDHLHQLLLSQHRDFARPSGFSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYN 120
           PQIDHLHQLLLSQHRDFA PSGFSLVR LADLGL ENAISQFRSLR RFPHDPPPISFYN
Sbjct: 63  PQIDHLHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYN 122

Query: 121 FLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180
            LFRCSLKESRVDCVIWLYKDM VARV PQTYTFNLLI ALCEMGYLENAREVFDKMSEK
Sbjct: 123 LLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEK 182

Query: 181 GCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEA 240
           GC+ NEFSLGILVRGYCRAGLH  G++LLDEMRS G +PNRVAYNTVIS+LCGEGQT EA
Sbjct: 183 GCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEA 242

Query: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNL 300
           EKLVE+MREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEE+GLP+PN VTYNL
Sbjct: 243 EKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNL 302

Query: 301 MLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKS 360
           MLEGFC+EGMF E++A+FDSMK SET LSL SYNIW+LGLVRSGKLLEA L+L EMAEK+
Sbjct: 303 MLEGFCSEGMFEEARAIFDSMKNSET-LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKN 362

Query: 361 IKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEAN 420
           IKPNLYSYNILV+GLCKYGMFSDARSI+GLMRESGVAPDTVTYSTLLHGYC RGKILEAN
Sbjct: 363 IKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEAN 422

Query: 421 YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL 480
           YVLREM+QVGCFPNMYTCNILLHSLWKEGRASEAE+LLQ MNERGYGLDNVTCNTMINGL
Sbjct: 423 YVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGL 482

Query: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCK 540
           CK GNLDKAIEIVSGMWT GSASLGNLGNSFI LFD  NNGKKCLPDSITYATII GLCK
Sbjct: 483 CKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCK 542

Query: 541 VGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600
           VGRVDEAKKKLLEMIGKKL+PDSLIFDTFI++YCKQGKLSSAFRVLKEMEKKGCNKSLRT
Sbjct: 543 VGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRT 602

Query: 601 YNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEML 660
           YNSLIQGLGS+NQIFEIYGLMDEM+ERGIFPNVYTYNNIISCLS  GK+KDAT LLDEML
Sbjct: 603 YNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEML 662

Query: 661 QKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSK 720
           QKGISPNIYTFRILIGAFF+ACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGET K
Sbjct: 663 QKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLK 722

Query: 721 AKELFEAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVID 780
           AKELFEAALDRSL LKNFLY+DLIE+LCKD KLDDASFILHKMMDKQY FDPASFMPVID
Sbjct: 723 AKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVID 782

Query: 781 GLGKRGNKHAADEFAERMMEMASETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIA 840
            LGKRG+KHAADEFAERMMEMASETD N+HENK IRGR NN DESDW KIVHRNDGSGIA
Sbjct: 783 ELGKRGSKHAADEFAERMMEMASETDFNEHENKNIRGRLNNNDESDWQKIVHRNDGSGIA 842

Query: 841 QKALKRVLKGWGQGSISTSQPQKFSTHDYWDGDA 875
           QK LKRVLKGWGQGSI+TSQPQKFST D+WDGDA
Sbjct: 843 QKTLKRVLKGWGQGSIATSQPQKFSTRDHWDGDA 875

[Close]
BLAST of Lcy08g004030 vs. ExPASy TrEMBL
Match: A0A1S3BID6 (pentatricopeptide repeat-containing protein At2g17140 OS=Cucumis melo OX=3656 GN=LOC103490214 PE=4 SV=1)

HSP 1 Score: 1593.6 bits (4125), Expect = 0.0e+00
Identity = 786/874 (89.93%), Postives = 827/874 (94.62%), Query Frame = 0 

Query: 1   MDRATRLSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMH 60
           MDRAT+LSKAIYLNS+NP LAWLLFKRILSSPI ASSSFFK SLQSVP+IARILIT+KMH
Sbjct: 1   MDRATKLSKAIYLNSNNPNLAWLLFKRILSSPIPASSSFFKPSLQSVPIIARILITSKMH 60

Query: 61  PQIDHLHQLLLSQHRDFARPSGFSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYN 120
           PQIDHLHQLLLSQHRDFA PSGFSLVR LADLGLFENAISQFRSLRARFPHDPPPISFYN
Sbjct: 61  PQIDHLHQLLLSQHRDFAHPSGFSLVRTLADLGLFENAISQFRSLRARFPHDPPPISFYN 120

Query: 121 FLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180
            LFRCSLKE RVDCVIWLYKDMVVARVNPQTYTFNLLI ALCEMGYLENAREVFDKMSEK
Sbjct: 121 LLFRCSLKEGRVDCVIWLYKDMVVARVNPQTYTFNLLISALCEMGYLENAREVFDKMSEK 180

Query: 181 GCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEA 240
           GC+ NEFSLGILVRGYCRAGLH  G++LLDEMRS G  PNRVAYNTVIS+LCGEGQT EA
Sbjct: 181 GCKPNEFSLGILVRGYCRAGLHSNGIDLLDEMRSSGAFPNRVAYNTVISSLCGEGQTEEA 240

Query: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNL 300
           EKLVE+MREVGLSPD VTFNCRIAALCKSGQILEASRIFRDMQIDEE+GLP+PN VTYNL
Sbjct: 241 EKLVEKMREVGLSPDTVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNL 300

Query: 301 MLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKS 360
           MLEGFC+EGMF E++A+FDSMK SET L+L+SYNIWLLGLVRSGKLLEARL+L EMAEK+
Sbjct: 301 MLEGFCSEGMFEEARAIFDSMKISET-LNLKSYNIWLLGLVRSGKLLEARLILNEMAEKN 360

Query: 361 IKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEAN 420
           IKPNLYSYNILV+GLC+YGMFSDARSI+G+MRESGVAPDTVTYSTLLHGYC RGK+LEAN
Sbjct: 361 IKPNLYSYNILVHGLCRYGMFSDARSILGVMRESGVAPDTVTYSTLLHGYCRRGKMLEAN 420

Query: 421 YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL 480
           YVLREM+QVGCFPNMYTCNILL+SLWKEGRASEAE+LLQKMNERGYGLDNVTCNTMINGL
Sbjct: 421 YVLREMIQVGCFPNMYTCNILLNSLWKEGRASEAEDLLQKMNERGYGLDNVTCNTMINGL 480

Query: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCK 540
           CK GNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFD  N+GKKCLPD ITYATII GLCK
Sbjct: 481 CKAGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDIRNSGKKCLPDPITYATIIGGLCK 540

Query: 541 VGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600
           VGRVDEAKKKLLEMIGK L+PDSLIFDTFI++YCKQGKLSSAFRVLKEMEKKGCNKSLRT
Sbjct: 541 VGRVDEAKKKLLEMIGKNLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600

Query: 601 YNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEML 660
           YNSLIQG GS+NQIFEIYGLMDEM+ERGIFPNVYTYNNI+ CLS  GK+KDAT LLDEML
Sbjct: 601 YNSLIQGFGSENQIFEIYGLMDEMKERGIFPNVYTYNNIMRCLSEGGKLKDATCLLDEML 660

Query: 661 QKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSK 720
           QKGISPNIYTFRILIGAFF+ACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGET K
Sbjct: 661 QKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLK 720

Query: 721 AKELFEAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVID 780
           AKELFEAALDRSL LKNFLY+DLIERLCKD KLDDASFILHKMMDKQY FDPASFMPVID
Sbjct: 721 AKELFEAALDRSLALKNFLYRDLIERLCKDGKLDDASFILHKMMDKQYSFDPASFMPVID 780

Query: 781 GLGKRGNKHAADEFAERMMEMASETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIA 840
            LGKRG+KHAADEFAERMMEMASET  NQHENK IRGR NN DESDW KI+HRNDGSGIA
Sbjct: 781 ELGKRGSKHAADEFAERMMEMASETGFNQHENKNIRGRLNNNDESDWQKIIHRNDGSGIA 840

Query: 841 QKALKRVLKGWGQGSISTSQPQKFSTHDYWDGDA 875
           QK LKRVLKGWGQGSI+TSQPQKF T D+WDGDA
Sbjct: 841 QKTLKRVLKGWGQGSIATSQPQKFITCDHWDGDA 873

[Close]
BLAST of Lcy08g004030 vs. NCBI nr
Match: XP_038888290.1 (pentatricopeptide repeat-containing protein At2g17140 [Benincasa hispida])

HSP 1 Score: 1636.3 bits (4236), Expect = 0.0e+00
Identity = 805/874 (92.11%), Postives = 838/874 (95.88%), Query Frame = 0 

Query: 1   MDRATRLSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMH 60
           MDRA +LSKA+YLNS+NP+LAWLLFKRILSSPIA SSSFFK+SLQSVP+IARILITAKMH
Sbjct: 1   MDRAAKLSKAVYLNSNNPKLAWLLFKRILSSPIATSSSFFKTSLQSVPIIARILITAKMH 60

Query: 61  PQIDHLHQLLLSQHRDFARPSGFSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYN 120
           PQIDHLHQLLLSQ+RDFA PSGF+LVR LADLGLFENAISQFRSLRARFPHDPP ISFYN
Sbjct: 61  PQIDHLHQLLLSQNRDFAHPSGFALVRVLADLGLFENAISQFRSLRARFPHDPPHISFYN 120

Query: 121 FLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180
            LFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK
Sbjct: 121 LLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180

Query: 181 GCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEA 240
           GC+ NEFSLGILVRGYCR GLH RG+ELLDEMRS G +PNRVAYNTVIS+LCGEGQ GEA
Sbjct: 181 GCKPNEFSLGILVRGYCRGGLHYRGIELLDEMRSSGVLPNRVAYNTVISSLCGEGQNGEA 240

Query: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNL 300
           EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQID+ELGLPQPN VTYNL
Sbjct: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDDELGLPQPNTVTYNL 300

Query: 301 MLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKS 360
           ML+GFCNEGMF ES+A+FDSMKKSETLLSLESYNIWLLGLVRSGKLLEARL++ EMAEKS
Sbjct: 301 MLQGFCNEGMFDESRALFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLIINEMAEKS 360

Query: 361 IKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEAN 420
           I PNL+SYNIL++GLCK GMFSDARSIIGLMRESGVAPD V+YSTLLHGYCCRGKILEAN
Sbjct: 361 INPNLHSYNILIHGLCKVGMFSDARSIIGLMRESGVAPDIVSYSTLLHGYCCRGKILEAN 420

Query: 421 YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL 480
           YVLREM+QVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL
Sbjct: 421 YVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL 480

Query: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCK 540
           CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFD GN GKKCLPDSITYATIISGLCK
Sbjct: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDIGNTGKKCLPDSITYATIISGLCK 540

Query: 541 VGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600
           VGRVDEAKKKLLEMIGKKL+PDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSL+T
Sbjct: 541 VGRVDEAKKKLLEMIGKKLSPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLQT 600

Query: 601 YNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEML 660
           YNSLIQGLG KNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLS  GK+KDAT LLDEML
Sbjct: 601 YNSLIQGLGGKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEML 660

Query: 661 QKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSK 720
           QKGI+PNIYTFRILIGAFF+ACDFGAA+ELFEIAL L GHKESLYSFMFNELLAGGETSK
Sbjct: 661 QKGIAPNIYTFRILIGAFFKACDFGAARELFEIALGLVGHKESLYSFMFNELLAGGETSK 720

Query: 721 AKELFEAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVID 780
           AKELFEAAL+RSL LKNFLY+DLIERLCKD KLDDASFILH MMDKQY FDPASFMPVID
Sbjct: 721 AKELFEAALNRSLALKNFLYRDLIERLCKDGKLDDASFILHTMMDKQYSFDPASFMPVID 780

Query: 781 GLGKRGNKHAADEFAERMMEMASETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIA 840
           GLGKRGNKHAADEFAERMMEMASETD+NQHENK  RGR NN DESDW KIVHRNDGSGIA
Sbjct: 781 GLGKRGNKHAADEFAERMMEMASETDINQHENKNTRGRLNNNDESDWRKIVHRNDGSGIA 840

Query: 841 QKALKRVLKGWGQGSISTSQPQKFSTHDYWDGDA 875
           QK LKRVLKGWGQGSISTSQPQ+FSTHDYWDGDA
Sbjct: 841 QKTLKRVLKGWGQGSISTSQPQRFSTHDYWDGDA 874

[Close]
BLAST of Lcy08g004030 vs. NCBI nr
Match: XP_022952221.1 (pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata] >XP_022952222.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata] >XP_022952223.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata] >XP_022952224.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata] >XP_022952225.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata] >XP_022952226.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata] >XP_022952227.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata] >XP_022952228.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata] >XP_022952229.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata] >XP_022952230.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata] >XP_022952231.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata])

HSP 1 Score: 1626.7 bits (4211), Expect = 0.0e+00
Identity = 798/872 (91.51%), Postives = 835/872 (95.76%), Query Frame = 0 

Query: 1   MDRATRLSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMH 60
           MDRA  LSKA+YLNS +PELAWLLFKR+LSSPI+ASSSFFK+SLQS+P+IARIL TAKMH
Sbjct: 1   MDRAAMLSKAVYLNSKSPELAWLLFKRVLSSPISASSSFFKTSLQSIPLIARILTTAKMH 60

Query: 61  PQIDHLHQLLLSQHRDFARPSGFSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYN 120
           PQIDHLHQLLLSQHRDFA PSGF+LVRALADLGLFENAISQFRSLRARFP+DPP ISFYN
Sbjct: 61  PQIDHLHQLLLSQHRDFAHPSGFALVRALADLGLFENAISQFRSLRARFPNDPPDISFYN 120

Query: 121 FLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180
           FLFRCSLKESRVD VIWLYKDMV ARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK
Sbjct: 121 FLFRCSLKESRVDFVIWLYKDMVFARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180

Query: 181 GCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEA 240
           GC+ NEFSLG++VRGYCRAGLH RG+ELLDEMRS G +PNRVAYNTVIS+LCGEGQTGEA
Sbjct: 181 GCKPNEFSLGLIVRGYCRAGLHDRGIELLDEMRSSGALPNRVAYNTVISSLCGEGQTGEA 240

Query: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNL 300
           EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPN +TYNL
Sbjct: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNTITYNL 300

Query: 301 MLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKS 360
           MLEGFCNEGMF ESKA+FDSMKKSET L++ESYNIWLLGLVRSGKLLEARL+L EMAEKS
Sbjct: 301 MLEGFCNEGMFEESKALFDSMKKSETHLTMESYNIWLLGLVRSGKLLEARLILNEMAEKS 360

Query: 361 IKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEAN 420
           IKPNLYSYNIL+YGLCKYGMFSDARSIIGLMRESGVAPDTV+YSTLLHGYCCRGKILEAN
Sbjct: 361 IKPNLYSYNILIYGLCKYGMFSDARSIIGLMRESGVAPDTVSYSTLLHGYCCRGKILEAN 420

Query: 421 YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL 480
           YVLREM QVGCFPNMYTCNILLHSLWKEG+ASEAEELLQKMNERGYGL+NVTCNT+INGL
Sbjct: 421 YVLREMTQVGCFPNMYTCNILLHSLWKEGKASEAEELLQKMNERGYGLNNVTCNTVINGL 480

Query: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCK 540
           CK+GNLDKAIEIVSGMW HGSASLGNLGNSFIGLFD GNNG KCLPDSITYATIIS LCK
Sbjct: 481 CKSGNLDKAIEIVSGMWNHGSASLGNLGNSFIGLFDIGNNGMKCLPDSITYATIISWLCK 540

Query: 541 VGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600
            GRVDEAKKKLLEMIGKKL+PDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT
Sbjct: 541 AGRVDEAKKKLLEMIGKKLSPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600

Query: 601 YNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEML 660
           YNSLIQGL SKNQIFEIYGLM+EM+E+GIFPNVYTYNNIISCLS  GK+KDAT LLDEML
Sbjct: 601 YNSLIQGLSSKNQIFEIYGLMEEMKEKGIFPNVYTYNNIISCLSEGGKLKDATSLLDEML 660

Query: 661 QKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSK 720
           QKGISPNIYTFRILIGAFF+ACDFGAAQELFEIALSLCGHKESLYSFMFNELL GGETSK
Sbjct: 661 QKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLTGGETSK 720

Query: 721 AKELFEAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVID 780
           AKELFEAALDRSL LKNFLY+DLIERLCKD KLDDASFILH MMDKQYRFDPAS MPVID
Sbjct: 721 AKELFEAALDRSLALKNFLYRDLIERLCKDGKLDDASFILHTMMDKQYRFDPASLMPVID 780

Query: 781 GLGKRGNKHAADEFAERMMEMASETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIA 840
           GLGK GNKHAADEFAE+MMEMASETD+N+HENK+ RGRSNN DE DWHKIVHRNDGSGIA
Sbjct: 781 GLGKSGNKHAADEFAEKMMEMASETDINRHENKLSRGRSNNDDERDWHKIVHRNDGSGIA 840

Query: 841 QKALKRVLKGWGQGSISTSQPQKFSTHDYWDG 873
           QK LKRVLKGWGQGSISTSQPQKFSTHD WDG
Sbjct: 841 QKTLKRVLKGWGQGSISTSQPQKFSTHDCWDG 872

[Close]
BLAST of Lcy08g004030 vs. NCBI nr
Match: XP_023554376.1 (pentatricopeptide repeat-containing protein At2g17140 [Cucurbita pepo subsp. pepo] >XP_023554377.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita pepo subsp. pepo] >XP_023554378.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita pepo subsp. pepo] >XP_023554379.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita pepo subsp. pepo] >XP_023554380.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita pepo subsp. pepo] >XP_023554381.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita pepo subsp. pepo] >XP_023554382.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita pepo subsp. pepo] >XP_023554383.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita pepo subsp. pepo] >XP_023554384.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1625.5 bits (4208), Expect = 0.0e+00
Identity = 798/874 (91.30%), Postives = 835/874 (95.54%), Query Frame = 0 

Query: 1   MDRATRLSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMH 60
           MDRA  LSKA+YLNS +PELAWLLFKR+LSSPI+ASSSFFK+SLQS+P+IARIL TAKMH
Sbjct: 1   MDRAAMLSKAVYLNSKSPELAWLLFKRVLSSPISASSSFFKTSLQSIPLIARILTTAKMH 60

Query: 61  PQIDHLHQLLLSQHRDFARPSGFSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYN 120
           PQIDHLHQLLLSQHRDFA PSGF+LVRALADLGLFENAISQFRSLRARFP+DPP ISFYN
Sbjct: 61  PQIDHLHQLLLSQHRDFAHPSGFALVRALADLGLFENAISQFRSLRARFPNDPPDISFYN 120

Query: 121 FLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180
           FLFRCSLKESRVD VIWLYKDMV ARVNPQTYTFNLLIRALCEMGYLENAR+VFDKMSEK
Sbjct: 121 FLFRCSLKESRVDFVIWLYKDMVFARVNPQTYTFNLLIRALCEMGYLENARQVFDKMSEK 180

Query: 181 GCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEA 240
           GC  NEFSLG++VRGYCRAGLH RG+ELLDEMRS G +PNRVAYNTVIS+LCGEGQTGEA
Sbjct: 181 GCNPNEFSLGLIVRGYCRAGLHDRGIELLDEMRSSGALPNRVAYNTVISSLCGEGQTGEA 240

Query: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNL 300
           EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPN VTYNL
Sbjct: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNTVTYNL 300

Query: 301 MLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKS 360
           MLEGFCNEGMF ESKA+FDSMKKSET L++ESYNIWLLGLVRSGKLLEARL+L EMAEKS
Sbjct: 301 MLEGFCNEGMFEESKALFDSMKKSETHLTMESYNIWLLGLVRSGKLLEARLILNEMAEKS 360

Query: 361 IKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEAN 420
           IKPNLYSYNIL+YGLCKYGMFSDARSIIGLMRESGVAPD V+YSTLLHGYCCRGKILE+N
Sbjct: 361 IKPNLYSYNILIYGLCKYGMFSDARSIIGLMRESGVAPDIVSYSTLLHGYCCRGKILESN 420

Query: 421 YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL 480
           YVLREM+QVGCFPNMYTCNILLHSLWKEG+ SEAEELLQKMNERGYGL+NVTCNT+I GL
Sbjct: 421 YVLREMIQVGCFPNMYTCNILLHSLWKEGKVSEAEELLQKMNERGYGLNNVTCNTVIKGL 480

Query: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCK 540
           CK+GNLDKAIEIVSGMW HGSASLGNLGNSFIGLFD GNNG KCLPDSITYATIIS LCK
Sbjct: 481 CKSGNLDKAIEIVSGMWNHGSASLGNLGNSFIGLFDIGNNGMKCLPDSITYATIISWLCK 540

Query: 541 VGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600
            GRVDEAKKKLLEMIGKKL+PDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT
Sbjct: 541 AGRVDEAKKKLLEMIGKKLSPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600

Query: 601 YNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEML 660
           YNSLIQGL SKNQIFEIYGLM+EM+E+GIFPNVYTYNNIISCLS  GK+KDAT LLDEML
Sbjct: 601 YNSLIQGLSSKNQIFEIYGLMEEMKEKGIFPNVYTYNNIISCLSEGGKLKDATSLLDEML 660

Query: 661 QKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSK 720
           QKGISPNIYTFRILIGAFF+ACDFGAAQELFEIALS+CGHKESLYSFMFNELL GGETSK
Sbjct: 661 QKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSICGHKESLYSFMFNELLTGGETSK 720

Query: 721 AKELFEAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVID 780
           AKELFEAALDRSL LKNFLY+DLIERLC D KLDDASFILHKMMDKQYRFDPASFMPVID
Sbjct: 721 AKELFEAALDRSLALKNFLYRDLIERLCMDGKLDDASFILHKMMDKQYRFDPASFMPVID 780

Query: 781 GLGKRGNKHAADEFAERMMEMASETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIA 840
           GLGK GNKHAADEFAE+MMEMASETD+NQHENKIIRGRSNN DE DWHKIVHRNDGSGIA
Sbjct: 781 GLGKSGNKHAADEFAEKMMEMASETDINQHENKIIRGRSNNDDERDWHKIVHRNDGSGIA 840

Query: 841 QKALKRVLKGWGQGSISTSQPQKFSTHDYWDGDA 875
           QK LKRVLKGWGQGSISTSQPQKFSTHD WDG A
Sbjct: 841 QKTLKRVLKGWGQGSISTSQPQKFSTHDCWDGVA 874

[Close]
BLAST of Lcy08g004030 vs. NCBI nr
Match: KAG7011809.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1624.8 bits (4206), Expect = 0.0e+00
Identity = 797/874 (91.19%), Postives = 835/874 (95.54%), Query Frame = 0 

Query: 1   MDRATRLSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMH 60
           MDR   LSKA+YLNS +PELAWLLFKR+LSSPI+ASSSFFK+SLQS+P+IARIL TAKMH
Sbjct: 1   MDRGAMLSKAVYLNSKSPELAWLLFKRVLSSPISASSSFFKTSLQSIPLIARILTTAKMH 60

Query: 61  PQIDHLHQLLLSQHRDFARPSGFSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYN 120
           PQIDHLHQLLLSQHRDFA PSGF+LVRA+ADLGLFENAISQFRSLRARFP+DPP ISFYN
Sbjct: 61  PQIDHLHQLLLSQHRDFAHPSGFALVRAVADLGLFENAISQFRSLRARFPNDPPDISFYN 120

Query: 121 FLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180
           FLFRCSLKESRVD VIWLYKDMV ARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK
Sbjct: 121 FLFRCSLKESRVDFVIWLYKDMVFARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180

Query: 181 GCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEA 240
           GC+ NEFSLG++VRGYCRAGLH RG+ELLDEMRS G +PNRVAYNTVIS+LCGEGQTGEA
Sbjct: 181 GCKPNEFSLGLIVRGYCRAGLHDRGIELLDEMRSSGALPNRVAYNTVISSLCGEGQTGEA 240

Query: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNL 300
           EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPN +TYNL
Sbjct: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNTITYNL 300

Query: 301 MLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKS 360
           MLEGFCNEGMF ESKA+FDSMKKSET L++ESYNIWLLGLVRSGKLLEARL+L EMAEKS
Sbjct: 301 MLEGFCNEGMFEESKALFDSMKKSETHLTMESYNIWLLGLVRSGKLLEARLILNEMAEKS 360

Query: 361 IKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEAN 420
           IKPNLYSYNIL+YGLCKYGMFSDARSIIGLMRESGVAPDTV+YSTLLHGYCCRGKILEAN
Sbjct: 361 IKPNLYSYNILIYGLCKYGMFSDARSIIGLMRESGVAPDTVSYSTLLHGYCCRGKILEAN 420

Query: 421 YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL 480
           YVLREM QVGCFPNMYTCNILLHSLWKEG+ASEAEELLQKMNERGYGL+NVTCNT+INGL
Sbjct: 421 YVLREMTQVGCFPNMYTCNILLHSLWKEGKASEAEELLQKMNERGYGLNNVTCNTVINGL 480

Query: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCK 540
           CK+GNLDKAIEIVSGMW HGSASLGNLGNSFIGLFD GNNG KCLPDSITYATIIS LCK
Sbjct: 481 CKSGNLDKAIEIVSGMWNHGSASLGNLGNSFIGLFDIGNNGMKCLPDSITYATIISWLCK 540

Query: 541 VGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600
            GRVDEAKKKLLEMIGKKL+PDSLIFDTFIH YCKQGKLSSAFRVLKEMEKKGCNKSLRT
Sbjct: 541 AGRVDEAKKKLLEMIGKKLSPDSLIFDTFIHCYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600

Query: 601 YNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEML 660
           YNSLIQGL SKNQIFEIYGLM+EM+E+GIFPNVYTYNNIISCLS  GK+KDAT LLDEML
Sbjct: 601 YNSLIQGLSSKNQIFEIYGLMEEMKEKGIFPNVYTYNNIISCLSEGGKLKDATSLLDEML 660

Query: 661 QKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSK 720
           QKGISPNIYTFRILIGAFF+ACDFGAAQELFEIALSLCGHKESLYSFMFNELL GGETSK
Sbjct: 661 QKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLTGGETSK 720

Query: 721 AKELFEAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVID 780
           AKELFEAALDRSL LKNFLY+DLIERLCKD KLDDASFILHKMMDKQYRFDPAS MPVID
Sbjct: 721 AKELFEAALDRSLALKNFLYRDLIERLCKDGKLDDASFILHKMMDKQYRFDPASLMPVID 780

Query: 781 GLGKRGNKHAADEFAERMMEMASETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIA 840
           GLGK GNKHAADEFAE+MMEMASETD+N+HENK+ RGRSNN DE DWHKIVHRNDGSGIA
Sbjct: 781 GLGKSGNKHAADEFAEKMMEMASETDINRHENKLSRGRSNNDDERDWHKIVHRNDGSGIA 840

Query: 841 QKALKRVLKGWGQGSISTSQPQKFSTHDYWDGDA 875
           QK LKRVLKGWGQGSISTSQPQKFSTHD WDG A
Sbjct: 841 QKTLKRVLKGWGQGSISTSQPQKFSTHDCWDGVA 874

[Close]
BLAST of Lcy08g004030 vs. NCBI nr
Match: XP_022968962.1 (pentatricopeptide repeat-containing protein At2g17140 [Cucurbita maxima] >XP_022968963.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita maxima] >XP_022968964.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita maxima] >XP_022968965.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita maxima] >XP_022968966.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita maxima] >XP_022968967.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita maxima] >XP_022968968.1 pentatricopeptide repeat-containing protein At2g17140 [Cucurbita maxima])

HSP 1 Score: 1619.8 bits (4193), Expect = 0.0e+00
Identity = 797/874 (91.19%), Postives = 834/874 (95.42%), Query Frame = 0 

Query: 1   MDRATRLSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMH 60
           M+RA  LSKA+YLNS +PELAWLLFKR+LSSPI+ASSSFF++SLQS+P+IARIL TAKMH
Sbjct: 1   MERAAMLSKAVYLNSKSPELAWLLFKRVLSSPISASSSFFETSLQSIPLIARILTTAKMH 60

Query: 61  PQIDHLHQLLLSQHRDFARPSGFSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYN 120
           PQIDHL+QLLLSQHRDFA PSGF+LVRALADLGLFENAISQFRSLR RFP+DPP ISFYN
Sbjct: 61  PQIDHLYQLLLSQHRDFAHPSGFALVRALADLGLFENAISQFRSLRDRFPNDPPDISFYN 120

Query: 121 FLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180
           FL RCSLKESRVD VIWLYKDMV A VNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK
Sbjct: 121 FLLRCSLKESRVDFVIWLYKDMVFAGVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEK 180

Query: 181 GCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEA 240
           GC  NEFSLG+LVRGYCRAGLH RG+ELLDEMRS G VPNRVAYNTVIS+LCGEGQTGEA
Sbjct: 181 GCNPNEFSLGLLVRGYCRAGLHYRGIELLDEMRSSGAVPNRVAYNTVISSLCGEGQTGEA 240

Query: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNL 300
           EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPN +TYNL
Sbjct: 241 EKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNTITYNL 300

Query: 301 MLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKS 360
           MLEGFCNEGMF ESKA+FDSMKKSET L++ESYNIWLLGLVRSGKLLEARL+L EM EKS
Sbjct: 301 MLEGFCNEGMFEESKALFDSMKKSETHLTMESYNIWLLGLVRSGKLLEARLILNEMVEKS 360

Query: 361 IKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEAN 420
           IKPNLYSYNIL+YGLCKYGMFSDARSIIGLMR+SGVAPDTV+YSTLLHGYCCRGKILE+N
Sbjct: 361 IKPNLYSYNILIYGLCKYGMFSDARSIIGLMRDSGVAPDTVSYSTLLHGYCCRGKILESN 420

Query: 421 YVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGL 480
           YVLREM+QVGCFPNMYTCNILLHSLWKEG+ASEAEELLQKMNERGYGLDNVTCNT+INGL
Sbjct: 421 YVLREMIQVGCFPNMYTCNILLHSLWKEGKASEAEELLQKMNERGYGLDNVTCNTVINGL 480

Query: 481 CKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCK 540
           CK+GNLDKAIEIVSGMWTHGSASLGNLGNSFI LFD GNNG KCLPDSITYATIIS LCK
Sbjct: 481 CKSGNLDKAIEIVSGMWTHGSASLGNLGNSFICLFDIGNNGMKCLPDSITYATIISWLCK 540

Query: 541 VGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600
            GRVDEAKKKLLEMIGKKL+PDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT
Sbjct: 541 AGRVDEAKKKLLEMIGKKLSPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRT 600

Query: 601 YNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEML 660
           YNSLIQGL SKNQIFEIYGLM+EM+E+GIFPNVYTYNNIISCLS  GK+KDAT LLDEML
Sbjct: 601 YNSLIQGLSSKNQIFEIYGLMEEMKEKGIFPNVYTYNNIISCLSEGGKLKDATSLLDEML 660

Query: 661 QKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSK 720
           QKGISPNIYTFRILIGAFF+ACDFGAAQELFEIALSLCGHKESLYSFMFNELL GGETSK
Sbjct: 661 QKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLTGGETSK 720

Query: 721 AKELFEAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVID 780
           AKELFEAALDRSL LKNFLY+DLIERLCKD KLDDASFILHKMMDKQYRFDPASFM VID
Sbjct: 721 AKELFEAALDRSLALKNFLYRDLIERLCKDGKLDDASFILHKMMDKQYRFDPASFMSVID 780

Query: 781 GLGKRGNKHAADEFAERMMEMASETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIA 840
           GLGK GNKHAADEFAE+MMEMASETD+NQHENKIIRGRSNN DE DWHKIVHRNDGSGIA
Sbjct: 781 GLGKSGNKHAADEFAEKMMEMASETDINQHENKIIRGRSNNDDERDWHKIVHRNDGSGIA 840

Query: 841 QKALKRVLKGWGQGSISTSQPQKFSTHDYWDGDA 875
           QK LKRVLKGWGQGSISTSQPQKFSTHD WDG A
Sbjct: 841 QKTLKRVLKGWGQGSISTSQPQKFSTHDCWDGVA 874

[Close]
BLAST of Lcy08g004030 vs. TAIR 10
Match: AT2G17140.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 1026.9 bits (2654), Expect = 9.3e-300
Identity = 507/872 (58.14%), Postives = 644/872 (73.85%), Query Frame = 0 

Query: 7   LSKAIYLNSHNPELAWLLFKRILSSPIAASSSFFKSSLQSVPVIARILITAKMHPQIDHL 66
           L KA+  N++NP LAW +FKRI SSP   S      SL + P IARIL+ AKMH +I  L
Sbjct: 5   LVKALLKNTNNPRLAWRIFKRIFSSPSEESHGI---SLDATPTIARILVRAKMHEEIQEL 64

Query: 67  HQLLLSQHRDFARPSG-FSLVRALADLGLFENAISQFRSLRARFPHDPPPISFYNFLFRC 126
           H L+LS      + S   S+V   A     + A  QF+ +R+RFP + P +  YN L   
Sbjct: 65  HNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLES 124

Query: 127 SLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMSEKGCQTN 186
            +KE RV+ V WLYKDMV+  + PQTYTFNLLIRALC+   ++ ARE+FD+M EKGC+ N
Sbjct: 125 CIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPN 184

Query: 187 EFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTGEAEKLVE 246
           EF+ GILVRGYC+AGL  +G+ELL+ M S G +PN+V YNT++S+ C EG+  ++EK+VE
Sbjct: 185 EFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVE 244

Query: 247 RMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTYNLMLEGF 306
           +MRE GL PDIVTFN RI+ALCK G++L+ASRIF DM++DE LGLP+PN +TYNLML+GF
Sbjct: 245 KMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGF 304

Query: 307 CNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAEKSIKPNL 366
           C  G+  ++K +F+S+++++ L SL+SYNIWL GLVR GK +EA  VL +M +K I P++
Sbjct: 305 CKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSI 364

Query: 367 YSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILEANYVLRE 426
           YSYNIL+ GLCK GM SDA++I+GLM+ +GV PD VTY  LLHGYC  GK+  A  +L+E
Sbjct: 365 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 424

Query: 427 MMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMINGLCKTGN 486
           MM+  C PN YTCNILLHSLWK GR SEAEELL+KMNE+GYGLD VTCN +++GLC +G 
Sbjct: 425 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 484

Query: 487 LDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYATIISGLCKVGRVD 546
           LDKAIEIV GM  HGSA+LGNLGNS+IGL D       CLPD ITY+T+++GLCK GR  
Sbjct: 485 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 544

Query: 547 EAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606
           EAK    EM+G+KL PDS+ ++ FIH +CKQGK+SSAFRVLK+MEKKGC+KSL TYNSLI
Sbjct: 545 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 604

Query: 607 QGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEMLQKGIS 666
            GLG KNQIFEI+GLMDEM+E+GI PN+ TYN  I  L    K++DAT LLDEM+QK I+
Sbjct: 605 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA 664

Query: 667 PNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETSKAKELF 726
           PN+++F+ LI AF +  DF  AQE+FE A+S+CG KE LYS MFNELLA G+  KA EL 
Sbjct: 665 PNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELL 724

Query: 727 EAALDRSLGLKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVIDGLGKR 786
           EA LDR   L  FLYKDL+E LCK ++L+ AS ILHKM+D+ Y FDPA+ MPVIDGLGK 
Sbjct: 725 EAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKM 784

Query: 787 GNKHAADEFAERMMEMAS----ETDVNQHENKIIRGRSNNYDESDWHKIVHRNDGSGIAQ 846
           GNK  A+ FA++MMEMAS       V+ +   I + + N    ++W  I+HR+DGSGIA 
Sbjct: 785 GNKKEANSFADKMMEMASVGEVANKVDPNARDIHQKKHNKNGGNNWQNILHRDDGSGIAL 844

Query: 847 KALKRVLKGWGQGSISTSQPQKFSTHDYWDGD 874
           ++L RV KGWGQG IS+ QP +    DYW+ D
Sbjct: 845 RSLSRVKKGWGQGDISSFQPPRVDYLDYWEDD 873

[Close]
BLAST of Lcy08g004030 vs. TAIR 10
Match: AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 285.0 bits (728), Expect = 2.0e-76
Identity = 169/526 (32.13%), Postives = 273/526 (51.90%), Query Frame = 0 

Query: 155 NLLIRALCEMGYLENAREVFDKMSEKGCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRS 214
           N LI +L  +G++E A  V+ ++S  G   N ++L I+V   C+ G   +    L +++ 
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263

Query: 215 CGTVPNRVAYNTVISALCGEGQTGEAEKLVERMREVGLSPDIVTFNCRIAALCKSGQILE 274
            G  P+ V YNT+ISA   +G   EA +L+  M   G SP + T+N  I  LCK G+   
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323

Query: 275 ASRIFRDMQIDEELGLPQPNIVTYNLMLEGFCNEGMFLESKAVFDSMKKSETLLSLESYN 334
           A  +F +M      GL  P+  TY  +L   C +G  +E++ VF  M+  + +  L  ++
Sbjct: 324 AKEVFAEML---RSGL-SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 383

Query: 335 IWLLGLVRSGKLLEARLVLYEMAEKSIKPNLYSYNILVYGLCKYGMFSDARSIIGLMRES 394
             +    RSG L +A +    + E  + P+   Y IL+ G C+ GM S A ++   M + 
Sbjct: 384 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 443

Query: 395 GVAPDTVTYSTLLHGYCCRGKILEANYVLREMMQVGCFPNMYTCNILLHSLWKEGRASEA 454
           G A D VTY+T+LHG C R  + EA+ +  EM +   FP+ YT  IL+    K G    A
Sbjct: 444 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 503

Query: 455 EELLQKMNERGYGLDNVTCNTMINGLCKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGL 514
            EL QKM E+   LD VT NT+++G  K G++D A EI + M +                
Sbjct: 504 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS---------------- 563

Query: 515 FDAGNNGKKCLPDSITYATIISGLCKVGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYC 574
                  K+ LP  I+Y+ +++ LC  G + EA +   EMI K + P  +I ++ I  YC
Sbjct: 564 -------KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 623

Query: 575 KQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSKNQIFEIYGLMDEMRER--GIFPN 634
           + G  S     L++M  +G      +YN+LI G   +  + + +GL+ +M E   G+ P+
Sbjct: 624 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 683

Query: 635 VYTYNNIISCLSGSGKMKDATFLLDEMLQKGISPNIYTFRILIGAF 679
           V+TYN+I+       +MK+A  +L +M+++G++P+  T+  +I  F
Sbjct: 684 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702

[Close]
BLAST of Lcy08g004030 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 282.7 bits (722), Expect = 9.9e-76
Identity = 168/563 (29.84%), Postives = 278/563 (49.38%), Query Frame = 0 

Query: 114 PPISFYNFLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREV 173
           P    YN +    +  +       ++ DM+  ++ P  +TF ++++A C +  +++A  +
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239

Query: 174 FDKMSEKGCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCG 233
              M++ GC  N      L+    +       ++LL+EM   G VP+   +N VI  LC 
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 234 EGQTGEAEKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQP 293
             +  EA K+V RM   G +PD +T+   +  LCK G++  A  +F          +P+P
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--------YRIPKP 359

Query: 294 NIVTYNLMLEGFCNEGMFLESKAVFDSMKKSETLL-SLESYNIWLLGLVRSGKLLEARLV 353
            IV +N ++ GF   G   ++KAV   M  S  ++  + +YN  + G  + G +  A  V
Sbjct: 360 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 419

Query: 354 LYEMAEKSIKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCC 413
           L++M  K  KPN+YSY ILV G CK G   +A +++  M   G+ P+TV ++ L+  +C 
Sbjct: 420 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 479

Query: 414 RGKILEANYVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVT 473
             +I EA  + REM + GC P++YT N L+  L +      A  LL+ M   G   + VT
Sbjct: 480 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 539

Query: 474 CNTMINGLCKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGNNGKKCLPDSITYA 533
            NT+IN   + G + +A ++V+ M   GS                         D ITY 
Sbjct: 540 YNTLINAFLRRGEIKEARKLVNEMVFQGSPL-----------------------DEITYN 599

Query: 534 TIISGLCKVGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKK 593
           ++I GLC+ G VD+A+    +M+     P ++  +  I+  C+ G +  A    KEM  +
Sbjct: 600 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 659

Query: 594 GCNKSLRTYNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDA 653
           G    + T+NSLI GL    +I +   +  +++  GI P+  T+N ++S L   G + DA
Sbjct: 660 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 711

Query: 654 TFLLDEMLQKGISPNIYTFRILI 676
             LLDE ++ G  PN  T+ IL+
Sbjct: 720 CLLLDEGIEDGFVPNHRTWSILL 711

[Close]
BLAST of Lcy08g004030 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 274.6 bits (701), Expect = 2.7e-73
Identity = 173/616 (28.08%), Postives = 303/616 (49.19%), Query Frame = 0 

Query: 119 YNFLFRCSLKESRVDCVIWLYKDMVVARVNPQTYTFNLLIRALCEMGYLENAREVFDKMS 178
           Y    R  L + + D  I L++DM+ +R  P    F+ L  A+ +    +    +  +M 
Sbjct: 56  YRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME 115

Query: 179 EKGCQTNEFSLGILVRGYCRAGLHCRGVELLDEMRSCGTVPNRVAYNTVISALCGEGQTG 238
            KG   N ++L I++  +CR    C     + ++   G  PN + ++T+I+ LC EG+  
Sbjct: 116 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175

Query: 239 EAEKLVERMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEELGLPQPNIVTY 298
           EA +LV+RM E+G  PD++T N  +  LC SG+  EA  +   M    E G  QPN VTY
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM---VEYGC-QPNAVTY 235

Query: 299 NLMLEGFCNEGMFLESKAVFDSMKKSETLLSLESYNIWLLGLVRSGKLLEARLVLYEMAE 358
             +L   C  G               +T L++E                    +L +M E
Sbjct: 236 GPVLNVMCKSG---------------QTALAME--------------------LLRKMEE 295

Query: 359 KSIKPNLYSYNILVYGLCKYGMFSDARSIIGLMRESGVAPDTVTYSTLLHGYCCRGKILE 418
           ++IK +   Y+I++ GLCK+G   +A ++   M   G+  + +TY+ L+ G+C  G+  +
Sbjct: 296 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 355

Query: 419 ANYVLREMMQVGCFPNMYTCNILLHSLWKEGRASEAEELLQKMNERGYGLDNVTCNTMIN 478
              +LR+M++    PN+ T ++L+ S  KEG+  EAEEL ++M  RG   D +T  ++I+
Sbjct: 356 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 415

Query: 479 GLCKTGNLDKAIEIVSGMWTHGSASLGNLGNSFIGLFDAGN------------NGKKCLP 538
           G CK  +LDKA ++V  M + G        N  I  +   N            + +  + 
Sbjct: 416 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 475

Query: 539 DSITYATIISGLCKVGRVDEAKKKLLEMIGKKLTPDSLIFDTFIHSYCKQGKLSSAFRVL 598
           D++TY T+I G C++G+++ AK+   EM+ +K+ P+ + +   +   C  G+   A  + 
Sbjct: 476 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 535

Query: 599 KEMEKKGCNKSLRTYNSLIQGLGSKNQIFEIYGLMDEMRERGIFPNVYTYNNIISCLSGS 658
           +++EK      +  YN +I G+ + +++ + + L   +  +G+ P V TYN +I  L   
Sbjct: 536 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 595

Query: 659 GKMKDATFLLDEMLQKGISPNIYTFRILIGAFFQACDFGAAQELFEIALSLCGHKESLYS 718
           G + +A  L  +M + G +P+ +T+ ILI A     D   + +L E  L  CG      +
Sbjct: 596 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE-ELKRCGFSVDAST 631

Query: 719 F-MFNELLAGGETSKA 722
             M  ++L+ G   K+
Sbjct: 656 IKMVIDMLSDGRLKKS 631

[Close]
BLAST of Lcy08g004030 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 273.1 bits (697), Expect = 7.8e-73
Identity = 184/650 (28.31%), Postives = 306/650 (47.08%), Query Frame = 0 

Query: 153 TFNLLIRALCEMGYLENAREVFDKMSEKGCQTNEFSLGILV---RGYCRAGLHCRGVELL 212
           T+  +I  L   G  E   EV   M E     N    G+ V   + Y R G     V + 
Sbjct: 42  TYRSVIEKLGYYGKFEAMEEVLVDMREN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVF 101

Query: 213 DEMRSCGTVPNRVAYNTVISALCGEGQTGEAEKLVERMREVGLSPDIVTFNCRIAALCKS 272
           + M      P   +YN ++S L   G   +A K+  RMR+ G++PD+ +F  R+ + CK+
Sbjct: 102 ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 161

Query: 273 GQILEASRIFRDMQIDEELGLPQPNIVTYNLMLEGFCNEGMFLESKAVFDSMKKSETLLS 332
            +   A R+  +M         + N+V Y  ++ GF  E    E   +F  M  S   L 
Sbjct: 162 SRPHAALRLLNNMSSQG----CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLC 221

Query: 333 LESYNIWLLGLVRSGKLLEARLVLYEMAEKSIKPNLYSYNILVYGLCKYGMFSDARSIIG 392
           L ++N  L  L + G + E   +L ++ ++ + PNL++YN+ + GLC+ G    A  ++G
Sbjct: 222 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 281

Query: 393 LMRESGVAPDTVTYSTLLHGYCCRGKILEANYVLREMMQVGCFPNMYTCNILLHSLWKEG 452
            + E G  PD +TY+ L++G C   K  EA   L +M+  G  P+ YT N L+    K G
Sbjct: 282 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 341

Query: 453 RASEAEELLQKMNERGYGLDNVTCNTMINGLCKTGNLDKAIEIVSGMWTHGSASLGNLGN 512
               AE ++      G+  D  T  ++I+GLC  G  ++A+ + +     G      L N
Sbjct: 342 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 401

Query: 513 SFI-GLFDAG-----------NNGKKCLPDSITYATIISGLCKVGRVDEAKKKLLEMIGK 572
           + I GL + G            + K  +P+  T+  +++GLCK+G V +A   +  MI K
Sbjct: 402 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 461

Query: 573 KLTPDSLIFDTFIHSYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSKNQIFEI 632
              PD   F+  IH Y  Q K+ +A  +L  M   G +  + TYNSL+ GL   ++  ++
Sbjct: 462 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 521

Query: 633 YGLMDEMRERGIFPNVYTYNNIISCLSGSGKMKDATFLLDEMLQKGISPNIYTFRILIGA 692
                 M E+G  PN++T+N ++  L    K+ +A  LL+EM  K ++P+  TF  LI  
Sbjct: 522 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 581

Query: 693 FFQACDFGAAQELF---EIALSLCGHKESLYSFMFNELLAGGETSKAKELFEAALDRSLG 752
           F +  D   A  LF   E A  +     + Y+ + +        + A++LF+  +DR LG
Sbjct: 582 FCKNGDLDGAYTLFRKMEEAYKVSSSTPT-YNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 641

Query: 753 LKNFLYKDLIERLCKDEKLDDASFILHKMMDKQYRFDPASFMPVIDGLGK 785
              + Y+ +++  CK   ++     L +MM+         F+P +  LG+
Sbjct: 642 PDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN-------GFIPSLTTLGR 677

The following BLAST results are available for this feature:
BLAST of Lcy08g004030 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0WPZ61.3e-29858.14Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX... [more]
Q9LFC52.8e-7532.13Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... [more]
Q9FMF61.4e-7429.84Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
Q76C992.9e-7228.22Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... [more]
Q0WKV33.8e-7228.08Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
BLAST of Lcy08g004030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GJU00.0e+0091.51pentatricopeptide repeat-containing protein At2g17140 OS=Cucurbita moschata OX=3... [more]
A0A6J1HUZ10.0e+0091.19pentatricopeptide repeat-containing protein At2g17140 OS=Cucurbita maxima OX=366... [more]
A0A6J1C3B00.0e+0090.62pentatricopeptide repeat-containing protein At2g17140 OS=Momordica charantia OX=... [more]
A0A0A0K4X00.0e+0090.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G024100 PE=4 SV=1[more]
A0A1S3BID60.0e+0089.93pentatricopeptide repeat-containing protein At2g17140 OS=Cucumis melo OX=3656 GN... [more]
BLAST of Lcy08g004030 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038888290.10.0e+0092.11pentatricopeptide repeat-containing protein At2g17140 [Benincasa hispida][more]
XP_022952221.10.0e+0091.51pentatricopeptide repeat-containing protein At2g17140 [Cucurbita moschata] >XP_0... [more]
XP_023554376.10.0e+0091.30pentatricopeptide repeat-containing protein At2g17140 [Cucurbita pepo subsp. pep... [more]
KAG7011809.10.0e+0091.19Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022968962.10.0e+0091.19pentatricopeptide repeat-containing protein At2g17140 [Cucurbita maxima] >XP_022... [more]
BLAST of Lcy08g004030 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G17140.19.3e-30058.14Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G01110.12.0e-7632.13Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G64320.19.9e-7629.84Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12300.12.7e-7328.08Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G74580.17.8e-7328.31Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 428..499
e-value: 1.5E-19
score: 72.2
coord: 288..357
e-value: 1.4E-11
score: 46.3
coord: 358..427
e-value: 3.6E-20
score: 74.3
coord: 509..591
e-value: 3.2E-18
score: 67.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 203..287
e-value: 6.6E-23
score: 83.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 592..697
e-value: 1.4E-25
score: 91.7
coord: 698..814
e-value: 1.7E-10
score: 42.5
coord: 46..202
e-value: 5.3E-23
score: 83.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 118..730
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 561..608
e-value: 4.3E-12
score: 46.0
coord: 149..198
e-value: 1.8E-11
score: 44.1
coord: 219..268
e-value: 6.8E-13
score: 48.6
coord: 332..377
e-value: 8.1E-9
score: 35.6
coord: 398..445
e-value: 1.8E-11
score: 44.1
coord: 631..678
e-value: 1.0E-13
score: 51.2
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 292..322
e-value: 1.4E-6
score: 27.9
coord: 523..554
e-value: 5.2E-11
score: 42.1
coord: 465..496
e-value: 1.3E-7
score: 31.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 257..283
e-value: 8.0E-5
score: 20.6
coord: 401..434
e-value: 1.0E-8
score: 32.8
coord: 471..500
e-value: 1.3E-7
score: 29.3
coord: 152..185
e-value: 4.9E-8
score: 30.7
coord: 600..633
e-value: 1.6E-6
score: 25.9
coord: 222..256
e-value: 1.3E-8
score: 32.5
coord: 190..220
e-value: 2.5E-4
score: 19.0
coord: 296..324
e-value: 3.7E-6
score: 24.8
coord: 634..668
e-value: 1.1E-6
score: 26.4
coord: 529..562
e-value: 2.9E-7
score: 28.2
coord: 436..469
e-value: 1.2E-4
score: 20.1
coord: 366..400
e-value: 2.7E-9
score: 34.6
coord: 566..594
e-value: 3.9E-7
score: 27.8
coord: 332..364
e-value: 1.0E-4
score: 20.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 150..184
score: 12.068449
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 469..503
score: 11.103854
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 12.660359
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 185..219
score: 10.632519
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 434..468
score: 10.906551
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 294..328
score: 10.807899
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 597..631
score: 10.807899
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 399..433
score: 12.167101
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 632..666
score: 12.254791
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 329..363
score: 9.854266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 527..561
score: 11.871145
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 364..398
score: 12.167101
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 562..596
score: 11.673842
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..285
score: 9.339086
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 852..874
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 852..866
NoneNo IPR availablePANTHERPTHR47938:SF21OS02G0132100 PROTEINcoord: 4..825
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 4..825

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g004030.1Lcy08g004030.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding