Lcy08g003880 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g003880
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ribosomal protein S3
Location	Chr08: 5148208 .. 5148876 (-)
RNA-Seq Expression	Lcy08g003880
Synteny	Lcy08g003880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTATTATTTTACATTTTTCCAAAAGAACATTCATTCATTTCTTTCTTGTTCGTCGACCACGACGACTGAAACGACGCGAAAAATCCAAACCCGGAAAGGAGAAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATCGGGTGTCTTCATTTAAGCGACGATACAAAAGAAGAACGAAATGAAGTGAGAGGTCGGGAGGCAGAGAAAAGAGTCGAGTCGATCAGGCTCGACAACTGGGAAAAGCAAAACGAAATTAGGATTTGGCCGAAAAAGAAGCAACGCTATGGATACCATGACCGATCACCATCGATAAAGAAGAATATTTCTAAATCACTTTGCATCAACGGGGCCTTCAAGCATCCGAAATATGCTGGAGTTGTAAATGACATAGTGTTCCTGATAGAAAATGACGACTCCTTCAGAAAAATGAAGTTATTCAAGTTCTTTTTCCCAAAGAAGTCCCACTCTGACGACCCGACGAGTCGTCTACTTAAAAGAACCCTCCCTGCAGTGCGCCCCTCCTTGAATTATTCGGCCATGCAATACTTATTGAATACAAAGAACAAAATTCATTTCGACCTCGTCGTAGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCGAAGAAGAAGCTTAGATAA

mRNA sequence

ATGTGTATTATTTTACATTTTTCCAAAAGAACATTCATTCATTTCTTTCTTGTTCGTCGACCACGACGACTGAAACGACGCGAAAAATCCAAACCCGGAAAGGAGAAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATCGGGTGTCTTCATTTAAGCGACGATACAAAAGAAGAACGAAATGAAGTGAGAGGTCGGGAGGCAGAGAAAAGAGTCGAGTCGATCAGGCTCGACAACTGGGAAAAGCAAAACGAAATTAGGATTTGGCCGAAAAAGAAGCAACGCTATGGATACCATGACCGATCACCATCGATAAAGAAGAATATTTCTAAATCACTTTGCATCAACGGGGCCTTCAAGCATCCGAAATATGCTGGAGTTGTAAATGACATAGTGTTCCTGATAGAAAATGACGACTCCTTCAGAAAAATGAAGTTATTCAAGTTCTTTTTCCCAAAGAAGTCCCACTCTGACGACCCGACGAGTCGTCTACTTAAAAGAACCCTCCCTGCAGTGCGCCCCTCCTTGAATTATTCGGCCATGCAATACTTATTGAATACAAAGAACAAAATTCATTTCGACCTCGTCGTAGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCGAAGAAGAAGCTTAGATAA

Coding sequence (CDS)

ATGTGTATTATTTTACATTTTTCCAAAAGAACATTCATTCATTTCTTTCTTGTTCGTCGACCACGACGACTGAAACGACGCGAAAAATCCAAACCCGGAAAGGAGAAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATCGGGTGTCTTCATTTAAGCGACGATACAAAAGAAGAACGAAATGAAGTGAGAGGTCGGGAGGCAGAGAAAAGAGTCGAGTCGATCAGGCTCGACAACTGGGAAAAGCAAAACGAAATTAGGATTTGGCCGAAAAAGAAGCAACGCTATGGATACCATGACCGATCACCATCGATAAAGAAGAATATTTCTAAATCACTTTGCATCAACGGGGCCTTCAAGCATCCGAAATATGCTGGAGTTGTAAATGACATAGTGTTCCTGATAGAAAATGACGACTCCTTCAGAAAAATGAAGTTATTCAAGTTCTTTTTCCCAAAGAAGTCCCACTCTGACGACCCGACGAGTCGTCTACTTAAAAGAACCCTCCCTGCAGTGCGCCCCTCCTTGAATTATTCGGCCATGCAATACTTATTGAATACAAAGAACAAAATTCATTTCGACCTCGTCGTAGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCGAAGAAGAAGCTTAGATAA

Protein sequence

MCIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEERNEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFKHPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSAMQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR

Homology

[Close]

BLAST of Lcy08g003880 vs. ExPASy Swiss-Prot
Match: Q04716 (Ribosomal protein S3, mitochondrial OS=Petunia hybrida OX=4102 GN=YRPS3 PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.6e-104
Identity = 190/221 (85.97%), Postives = 198/221 (89.59%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CIILHF KRTFIHFFL RRPRRLKRREKS+P KEKGRW AFGKVGPIGCLH SD T+EER
Sbjct: 59  CIILHFPKRTFIHFFLPRRPRRLKRREKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEER 118

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGR A KRVESIRLD+ EKQNEIRIWPKKKQ YGYHDRSPSIKKN+SKSL ++GAFK
Sbjct: 119 NEVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFK 178

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAG+ NDI FLIENDDSFRK  LFKFFFPKKS SD PTS LLKRTLPAVRPSLNYS 
Sbjct: 179 HPKYAGIENDIAFLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYSV 238

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQYLLNTKNKIHFD VVVLNHFVAPGVAEPSTMGGA  + R
Sbjct: 239 MQYLLNTKNKIHFDPVVVLNHFVAPGVAEPSTMGGANAQGR 279

[Close]

BLAST of Lcy08g003880 vs. ExPASy Swiss-Prot
Match: P27754 (Ribosomal protein S3, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS3 PE=3 SV=2)

HSP 1 Score: 375.6 bits (963), Expect = 4.0e-103
Identity = 184/221 (83.26%), Postives = 198/221 (89.59%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CIILHF KRTFIHFFL RRPRRLKR +KS+PGKEK RWW FGKVGPIGCLH +DDT+EER
Sbjct: 60  CIILHFPKRTFIHFFLPRRPRRLKRGKKSRPGKEKARWWEFGKVGPIGCLHSNDDTEEER 119

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEV GR A KRVESIRLD+ EKQNEIRIWPKKKQ YGYHDRSPSIKKN+SKSL ++GAFK
Sbjct: 120 NEVGGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFK 179

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAGV+NDI FLIENDDSFRK KLFKFFFPKKS SD PTS LLKRT PAVRPSLNYS 
Sbjct: 180 HPKYAGVLNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTPPAVRPSLNYSV 239

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQY LNTKN++HFD +VVLNHFVAPGVAEPSTMGGA ++ R
Sbjct: 240 MQYYLNTKNQMHFDPLVVLNHFVAPGVAEPSTMGGANRQGR 280

[Close]

BLAST of Lcy08g003880 vs. ExPASy Swiss-Prot
Match: P27928 (Ribosomal protein S3, mitochondrial OS=Zea mays OX=4577 GN=RPS3 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 7.8e-99
Identity = 182/218 (83.49%), Postives = 192/218 (88.07%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CIILHF KRTFIHFFL RRP RLKRR+KS+PGK+KGRWWAFGKVGPIGCLH S+ T+EER
Sbjct: 60  CIILHFPKRTFIHFFLPRRPLRLKRRDKSRPGKDKGRWWAFGKVGPIGCLHSSEGTEEER 119

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGR A KRVESI   + EKQNEIRIWPKK QRYGYHDR+PS KKN SKSL ++GAFK
Sbjct: 120 NEVRGRGAGKRVESI---DREKQNEIRIWPKKMQRYGYHDRTPSRKKNFSKSLRVSGAFK 179

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFF-PKKSHSDDPTSRLLKRTLPAVRPSLNYS 181
           HPKYAGVVNDI FLIENDDSF K KLFKFFF PKKS SD PTS LLKRTLPAVRPSLNYS
Sbjct: 180 HPKYAGVVNDIAFLIENDDSFIKTKLFKFFFLPKKSRSDGPTSHLLKRTLPAVRPSLNYS 239

Query: 182 AMQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAK 219
            MQY  NTKNK+HFD VVVLNHFVAPGVAEPSTMGGAK
Sbjct: 240 VMQYFFNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGAK 274

[Close]

BLAST of Lcy08g003880 vs. ExPASy Swiss-Prot
Match: Q95749 (Ribosomal protein S3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS3 PE=1 SV=3)

HSP 1 Score: 345.5 bits (885), Expect = 4.4e-94
Identity = 176/222 (79.28%), Postives = 188/222 (84.68%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWW-AFGKVGPIGCLHLSDDTKEE 61
           CIILHF KRTFIHFFL RRPRRLKRREK++PGKEKGRWW  FGK GPI CLH SDDT+EE
Sbjct: 60  CIILHFPKRTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTTFGKAGPIECLHSSDDTEEE 119

Query: 62  RNEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAF 121
           RNEVRGR A KRVESIRLD+ +KQNEIR WPKKKQRYGYHDR PSIKKN+SK L I+GAF
Sbjct: 120 RNEVRGRGARKRVESIRLDDRKKQNEIRGWPKKKQRYGYHDRLPSIKKNLSKLLRISGAF 179

Query: 122 KHPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYS 181
           KHPKYAGVVNDI FLIENDDSF+K KLFK FF  KS SD PTS L  RTLPAVRPSLN+ 
Sbjct: 180 KHPKYAGVVNDIAFLIENDDSFKKTKLFKLFFQNKSRSDGPTSYL--RTLPAVRPSLNFL 239

Query: 182 AMQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
            MQY  NTKN+I+FD VVVLNHFVAPG AEPSTMG A  + R
Sbjct: 240 VMQYFFNTKNQINFDPVVVLNHFVAPGAAEPSTMGRANAQGR 279

[Close]

BLAST of Lcy08g003880 vs. ExPASy Swiss-Prot
Match: P49386 (Ribosomal protein S3, mitochondrial OS=Brassica napus OX=3708 GN=RPS3 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 8.4e-93
Identity = 174/217 (80.18%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAF-GKVGPIGCLHLSDDTKEE 61
           CI+LHF KRTFIHFFL RRPRRLKRREK++PGKEKGRWW   GK GPIGCL   DDT+EE
Sbjct: 60  CILLHFPKRTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTTPGKAGPIGCLR--DDTEEE 119

Query: 62  RNEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAF 121
           RNEVRGR A KRVESIRLD+ +KQNEIR WPKKKQRYGYHDR+PSIKKN+SKSL I+GAF
Sbjct: 120 RNEVRGRGARKRVESIRLDDRKKQNEIRGWPKKKQRYGYHDRTPSIKKNLSKSLRISGAF 179

Query: 122 KHPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYS 181
           KHPKY GVVNDI FLIENDDSFRK KLFKFFFPKKS SD PTS L  RTLPAV PSLN+ 
Sbjct: 180 KHPKYGGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSYL--RTLPAVGPSLNFL 239

Query: 182 AMQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGA 218
            MQY  NTKN+++FD VVVLNHFVAPG AEPSTMG A
Sbjct: 240 VMQYFFNTKNQMNFDPVVVLNHFVAPGAAEPSTMGRA 272

[Close]

BLAST of Lcy08g003880 vs. ExPASy TrEMBL
Match: D5I3A1 (Ribosomal protein S3 OS=Citrullus lanatus OX=3654 GN=rps3 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.3e-108
Identity = 197/221 (89.14%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CIILHF KRTFIHFFL RRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLH SDDT+EER
Sbjct: 60  CIILHFPKRTFIHFFLPRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHSSDDTEEER 119

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGREAEKRVESIRLD+ EKQNEIRIWPKKKQRYGYHDRSPSIKKN+SK L ++GAFK
Sbjct: 120 NEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFK 179

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAGVVNDI FLIENDDSFRK KLFKFFFPKKS SD PTS LLKRTLPAVRPSLNY  
Sbjct: 180 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYLV 239

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQYLLNTKNK+HFD VVVLNHFVAPGVAEPSTMGGA  + R
Sbjct: 240 MQYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGANTQGR 280

[Close]

BLAST of Lcy08g003880 vs. ExPASy TrEMBL
Match: E5DM74 (Ribosomal protein S3 (Fragment) OS=Ixerba brexioides OX=85557 GN=rps3 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.1e-106
Identity = 195/221 (88.24%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CIILHF KRTFIHFFL RRPRRLKRR KS+PGKEKGRWWAFGKVGPIGCLH SDDT+EER
Sbjct: 6   CIILHFPKRTFIHFFLPRRPRRLKRRAKSRPGKEKGRWWAFGKVGPIGCLHSSDDTEEER 65

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGR A KRVESIRLD+ EKQNEIRIWPKKKQRYGYHDRSPSIKKN+SKSL ++GAFK
Sbjct: 66  NEVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFK 125

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAGVVNDI FLIENDDSFRK KLFKFFFPKKS SD PTS LLKRTLPAVRPSLNYS 
Sbjct: 126 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYSV 185

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQYLLNTKNK+HFD VVVLNHFVAPGVAEPSTMGGA  + R
Sbjct: 186 MQYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGANAQER 226

[Close]

BLAST of Lcy08g003880 vs. ExPASy TrEMBL
Match: A0A7D6C3M1 (Ribosomal protein S3 OS=Luffa acutangula OX=56866 GN=rps3 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.8e-106
Identity = 197/221 (89.14%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CIIL+F KRTFIHFFL RRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLH  DDT+EER
Sbjct: 60  CIILNFPKRTFIHFFLPRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLH--DDTEEER 119

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGREAEKRVESIRLD+ EKQNEIRIWPKKKQRYGYHDRSPSIKKN+SKSL ++GAFK
Sbjct: 120 NEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFK 179

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAGVVNDI FLIENDDSFRK KLFKFFFPKKS SD PTS LLKRTLPAVRPSLNYS 
Sbjct: 180 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYSV 239

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQYLLNTKNK+HFD VVVLNHFVAPGVAEPSTMGGA  + R
Sbjct: 240 MQYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGANTQGR 278

[Close]

BLAST of Lcy08g003880 vs. ExPASy TrEMBL
Match: A0A5J6NGQ5 (Ribosomal protein S3 OS=Tamarindus indica OX=58860 GN=rps3 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.4e-106
Identity = 194/221 (87.78%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CIILHF KRTFIHFFL RRPRRLKRREKS+PGKEKGRWWAFGKVGPIGCLH SD+T+EER
Sbjct: 60  CIILHFPKRTFIHFFLPRRPRRLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEER 119

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGR A KRVESIRLD+ EKQNEIRIWPKKKQRYGYHDRSPSIKKN+SKSL ++GAFK
Sbjct: 120 NEVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFK 179

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAGVVNDI FLIENDDSFRK KLFKFFFPKKS SD PTS L KRTLPAVRPSLNYS 
Sbjct: 180 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLFKRTLPAVRPSLNYSV 239

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQYLLNTKN+IHFD VVVLNHFVAPGVAEPSTMGGA  + R
Sbjct: 240 MQYLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMGGANAQGR 280

[Close]

BLAST of Lcy08g003880 vs. ExPASy TrEMBL
Match: A0A5J6NGQ6 (Ribosomal protein S3 OS=Cercis canadensis OX=49801 GN=rps3 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.0e-106
Identity = 193/221 (87.33%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CII+HF KRTFIHFFL RRPRRLKRREKS+PGKEKGRWWAFGKVGPIGCLH SD+T+EER
Sbjct: 60  CIIIHFPKRTFIHFFLPRRPRRLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEER 119

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGR A KRVESIRLD+ EKQNEIRIWPKKKQRYGYHDRSPSIKKN+SKSL ++GAFK
Sbjct: 120 NEVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFK 179

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAGVVNDI FLIENDDSFRK KLFKFFFPKKS SD PTS L KRTLPAVRPSLNYS 
Sbjct: 180 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLFKRTLPAVRPSLNYSV 239

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQYLLNTKN+IHFD VVVLNHFVAPGVAEPSTMGGA  + R
Sbjct: 240 MQYLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMGGANAQGR 280

[Close]

BLAST of Lcy08g003880 vs. NCBI nr
Match: YP_003587231.1 (ribosomal protein S3 [Citrullus lanatus] >ACV96652.1 ribosomal protein S3 [Citrullus lanatus])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 197/221 (89.14%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CIILHF KRTFIHFFL RRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLH SDDT+EER
Sbjct: 60  CIILHFPKRTFIHFFLPRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHSSDDTEEER 119

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGREAEKRVESIRLD+ EKQNEIRIWPKKKQRYGYHDRSPSIKKN+SK L ++GAFK
Sbjct: 120 NEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFK 179

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAGVVNDI FLIENDDSFRK KLFKFFFPKKS SD PTS LLKRTLPAVRPSLNY  
Sbjct: 180 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYLV 239

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQYLLNTKNK+HFD VVVLNHFVAPGVAEPSTMGGA  + R
Sbjct: 240 MQYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGANTQGR 280

[Close]

BLAST of Lcy08g003880 vs. NCBI nr
Match: ADL63892.1 (ribosomal protein S3, partial [Ixerba brexioides])

HSP 1 Score: 396.0 bits (1016), Expect = 2.2e-106
Identity = 195/221 (88.24%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CIILHF KRTFIHFFL RRPRRLKRR KS+PGKEKGRWWAFGKVGPIGCLH SDDT+EER
Sbjct: 6   CIILHFPKRTFIHFFLPRRPRRLKRRAKSRPGKEKGRWWAFGKVGPIGCLHSSDDTEEER 65

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGR A KRVESIRLD+ EKQNEIRIWPKKKQRYGYHDRSPSIKKN+SKSL ++GAFK
Sbjct: 66  NEVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFK 125

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAGVVNDI FLIENDDSFRK KLFKFFFPKKS SD PTS LLKRTLPAVRPSLNYS 
Sbjct: 126 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYSV 185

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQYLLNTKNK+HFD VVVLNHFVAPGVAEPSTMGGA  + R
Sbjct: 186 MQYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGANAQER 226

[Close]

BLAST of Lcy08g003880 vs. NCBI nr
Match: YP_009913654.1 (ribosomal protein S3 [Luffa acutangula] >QLJ93023.1 ribosomal protein S3 [Luffa acutangula])

HSP 1 Score: 395.2 bits (1014), Expect = 3.7e-106
Identity = 197/221 (89.14%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CIIL+F KRTFIHFFL RRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLH  DDT+EER
Sbjct: 60  CIILNFPKRTFIHFFLPRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLH--DDTEEER 119

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGREAEKRVESIRLD+ EKQNEIRIWPKKKQRYGYHDRSPSIKKN+SKSL ++GAFK
Sbjct: 120 NEVRGREAEKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFK 179

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAGVVNDI FLIENDDSFRK KLFKFFFPKKS SD PTS LLKRTLPAVRPSLNYS 
Sbjct: 180 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYSV 239

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQYLLNTKNK+HFD VVVLNHFVAPGVAEPSTMGGA  + R
Sbjct: 240 MQYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGANTQGR 278

[Close]

BLAST of Lcy08g003880 vs. NCBI nr
Match: YP_009704660.1 (ribosomal protein S3 [Tamarindus indica] >QEX95863.1 ribosomal protein S3 [Tamarindus indica])

HSP 1 Score: 394.8 bits (1013), Expect = 4.9e-106
Identity = 194/221 (87.78%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CIILHF KRTFIHFFL RRPRRLKRREKS+PGKEKGRWWAFGKVGPIGCLH SD+T+EER
Sbjct: 60  CIILHFPKRTFIHFFLPRRPRRLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEER 119

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGR A KRVESIRLD+ EKQNEIRIWPKKKQRYGYHDRSPSIKKN+SKSL ++GAFK
Sbjct: 120 NEVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFK 179

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAGVVNDI FLIENDDSFRK KLFKFFFPKKS SD PTS L KRTLPAVRPSLNYS 
Sbjct: 180 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLFKRTLPAVRPSLNYSV 239

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQYLLNTKN+IHFD VVVLNHFVAPGVAEPSTMGGA  + R
Sbjct: 240 MQYLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMGGANAQGR 280

[Close]

BLAST of Lcy08g003880 vs. NCBI nr
Match: QEX95845.1 (ribosomal protein S3 [Cercis canadensis])

HSP 1 Score: 394.0 bits (1011), Expect = 8.3e-106
Identity = 193/221 (87.33%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHLSDDTKEER 61
           CII+HF KRTFIHFFL RRPRRLKRREKS+PGKEKGRWWAFGKVGPIGCLH SD+T+EER
Sbjct: 60  CIIIHFPKRTFIHFFLPRRPRRLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEER 119

Query: 62  NEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAFK 121
           NEVRGR A KRVESIRLD+ EKQNEIRIWPKKKQRYGYHDRSPSIKKN+SKSL ++GAFK
Sbjct: 120 NEVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFK 179

Query: 122 HPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYSA 181
           HPKYAGVVNDI FLIENDDSFRK KLFKFFFPKKS SD PTS L KRTLPAVRPSLNYS 
Sbjct: 180 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLFKRTLPAVRPSLNYSV 239

Query: 182 MQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
           MQYLLNTKN+IHFD VVVLNHFVAPGVAEPSTMGGA  + R
Sbjct: 240 MQYLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMGGANAQGR 280

[Close]

BLAST of Lcy08g003880 vs. TAIR 10
Match: ATMG00090.1 (structural constituent of ribosome;protein binding )

HSP 1 Score: 347.8 bits (891), Expect = 6.3e-96
Identity = 177/222 (79.73%), Postives = 189/222 (85.14%), Query Frame = 0


Query: 2   CIILHFSKRTFIHFFLVRRPRRLKRREKSKPGKEKGRWW-AFGKVGPIGCLHLSDDTKEE 61
           CIILHF KRTFIHFFL RRPRRLKRREK++PGKEKGRWW  FGK GPI CLH SDDT+EE
Sbjct: 60  CIILHFPKRTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTTFGKAGPIECLHSSDDTEEE 119

Query: 62  RNEVRGREAEKRVESIRLDNWEKQNEIRIWPKKKQRYGYHDRSPSIKKNISKSLCINGAF 121
           RNEVRGR A KRVESIRLD+ +KQNEIR WPKKKQRYGYHDR PSIKKN+SKSL I+GAF
Sbjct: 120 RNEVRGRGARKRVESIRLDDRKKQNEIRGWPKKKQRYGYHDRLPSIKKNLSKSLRISGAF 179

Query: 122 KHPKYAGVVNDIVFLIENDDSFRKMKLFKFFFPKKSHSDDPTSRLLKRTLPAVRPSLNYS 181
           KHPKYAGVVNDI FLIENDDSF+K KLFK FF  KS SD PTS L  RTLPAVRPSLN+ 
Sbjct: 180 KHPKYAGVVNDIAFLIENDDSFKKTKLFKLFFQNKSRSDGPTSYL--RTLPAVRPSLNFL 239

Query: 182 AMQYLLNTKNKIHFDLVVVLNHFVAPGVAEPSTMGGAKKKLR 223
            MQY  NTKN+I+FD VVVLNHFVAPG AEPSTMG A  + R
Sbjct: 240 VMQYFFNTKNQINFDPVVVLNHFVAPGAAEPSTMGRANAQGR 279

The following BLAST results are available for this feature:

BLAST of Lcy08g003880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04716	1.6e-104	85.97	Ribosomal protein S3, mitochondrial OS=Petunia hybrida OX=4102 GN=YRPS3 PE=2 SV=...	[more]
P27754	4.0e-103	83.26	Ribosomal protein S3, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS3 PE=3...	[more]
P27928	7.8e-99	83.49	Ribosomal protein S3, mitochondrial OS=Zea mays OX=4577 GN=RPS3 PE=3 SV=1	[more]
Q95749	4.4e-94	79.28	Ribosomal protein S3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS3 PE=1...	[more]
P49386	8.4e-93	80.18	Ribosomal protein S3, mitochondrial OS=Brassica napus OX=3708 GN=RPS3 PE=3 SV=1	[more]

BLAST of Lcy08g003880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
D5I3A1	7.3e-108	89.14	Ribosomal protein S3 OS=Citrullus lanatus OX=3654 GN=rps3 PE=3 SV=1	[more]
E5DM74	1.1e-106	88.24	Ribosomal protein S3 (Fragment) OS=Ixerba brexioides OX=85557 GN=rps3 PE=3 SV=1	[more]
A0A7D6C3M1	1.8e-106	89.14	Ribosomal protein S3 OS=Luffa acutangula OX=56866 GN=rps3 PE=3 SV=1	[more]
A0A5J6NGQ5	2.4e-106	87.78	Ribosomal protein S3 OS=Tamarindus indica OX=58860 GN=rps3 PE=3 SV=1	[more]
A0A5J6NGQ6	4.0e-106	87.33	Ribosomal protein S3 OS=Cercis canadensis OX=49801 GN=rps3 PE=3 SV=1	[more]

BLAST of Lcy08g003880 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_003587231.1	1.5e-107	89.14	ribosomal protein S3 [Citrullus lanatus] >ACV96652.1 ribosomal protein S3 [Citru...	[more]
ADL63892.1	2.2e-106	88.24	ribosomal protein S3, partial [Ixerba brexioides]	[more]
YP_009913654.1	3.7e-106	89.14	ribosomal protein S3 [Luffa acutangula] >QLJ93023.1 ribosomal protein S3 [Luffa ...	[more]
YP_009704660.1	4.9e-106	87.78	ribosomal protein S3 [Tamarindus indica] >QEX95863.1 ribosomal protein S3 [Tamar...	[more]
QEX95845.1	8.3e-106	87.33	ribosomal protein S3 [Cercis canadensis]	[more]

BLAST of Lcy08g003880 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00090.1	6.3e-96	79.73	structural constituent of ribosome;protein binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044954	Ribosomal protein S3, mitochondrial, plant	PANTHER	PTHR35928	RIBOSOMAL PROTEIN S3, MITOCHONDRIAL	coord: 50..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g003880.1	Lcy08g003880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome