
Lcy08g003600 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGTTTCCCAAACCCTAGGTGGCACTTCCAGATGCGGCCGTGCGATCGGCCCTTCCCTTGATAAGATTGTCAAGAACGCGGCCTGGCGTAAGCATTCTCACCTTGTTTCCTCTTGCAAGTCCGTTCTCGATAAGCTTGATTCTATTGGGGAGGCTGCTCTTGATCCTGCTTCCCCGCTTGCTGGCCTTTCACCGGCTGATGCGGAGTTTGTGCTCCAACCGCTCCTTTTGGCCCTCGATGCTGCCTATGTCAAGGTTGCTGAGCCTGCGCTTGAGTGCGTCTTCAAATTGTTCTCTCGCGGTCTCTTCCGTGGCGAGATCGAGCGGCCCGATGGCGAGGCGAATTCCGGTGCCAGTTCTATTGTGTATAAGATCATTGAGTCTGTTTGCAAGTTGGGAGGTCTCGGTTTCAGATCTGAAACCGTGAGGGAGGAAGGCCTTCCTCCCGTTTCGCGTCGTCGCCGGAGAGGGAGTCCCTCTCTCTCCCTCTTCTTTATTTAATTTAAGAAAAAAAAAAGGAGAAGAAAGGGAAGAGAAGAGAGAAGCAGAAGAAAAAAAAAAAAAACATCTGGCAGCCGCCCGCCGGAGTTGGAGAAGAAGATGGGGAAGAGGATGAATAAGGGAGAGCAGATAAAGAATTAAAAAAGAAAAAAAAAATTTATTAAAATAATAGTGTCACGTCAGCAACCGTTAAGATTTAACAGAAAAATAGATGGCATGGACCAAAGTGCTGCTTATCTCAATGACTAAACTGTAACTTAACCCAAATCTCAGAGACCAAAAGTGTATTTTTCCCCCATAAATTATATGTAGAAGTAGGGTTACATGTTTCATACTAAACTTTGAGCACATAAGAGCCCGTTTGGTAACGTTCTCGTTTCTCGTTTCTTGTTTTCAATTTTATTAAGAAATCTAAGCATTTAATAACTACAATGTTTCTTGTTTCTCATTTTTTAGAAACACTCCCAAAATTTGTATAGAACTTTTGGGAACAACTAAAACTAGTTTCTCATTTTTTGTTCTTGTTTCCAATTTTTTCCAAACATAAATAAGAATATAGGTTTATTATTATTAAATGTATAGGTGTTAAGGTCATGAAATTCTATTTTTCTTTATTAAAAATGAAGAAACGGAAACAAGAAACGAGAACGTTACCAAACGGATCCTAAAAGAATAGTTAGAGACGTTTCAATTTACAGAGAGGACATGATCTGCTAAATCAGAACCTGTCCAAACTGATTTGGGATGGACAAAGTCTAAAGTGA ATGTCGGTTTCCCAAACCCTAGGTGGCACTTCCAGATGCGGCCGTGCGATCGGCCCTTCCCTTGATAAGATTGTCAAGAACGCGGCCTGGCGTAAGCATTCTCACCTTGTTTCCTCTTGCAAGTCCGTTCTCGATAAGCTTGATTCTATTGGGGAGGCTGCTCTTGATCCTGCTTCCCCGCTTGCTGGCCTTTCACCGGCTGATGCGGAGTTTGTGCTCCAACCGCTCCTTTTGGCCCTCGATGCTGCCTATGTCAAGGTTGCTGAGCCTGCGCTTGAGTGCGTCTTCAAATTGTTCTCTCGCGGTCTCTTCCGTGGCGAGATCGAGCGGCCCGATGGCGAGGCGAATTCCGGTGCCAGTTCTATTGTGTATAAGATCATTGAGTCTAGAGGACATGATCTGCTAAATCAGAACCTGTCCAAACTGATTTGGGATGGACAAAGTCTAAAGTGA ATGTCGGTTTCCCAAACCCTAGGTGGCACTTCCAGATGCGGCCGTGCGATCGGCCCTTCCCTTGATAAGATTGTCAAGAACGCGGCCTGGCGTAAGCATTCTCACCTTGTTTCCTCTTGCAAGTCCGTTCTCGATAAGCTTGATTCTATTGGGGAGGCTGCTCTTGATCCTGCTTCCCCGCTTGCTGGCCTTTCACCGGCTGATGCGGAGTTTGTGCTCCAACCGCTCCTTTTGGCCCTCGATGCTGCCTATGTCAAGGTTGCTGAGCCTGCGCTTGAGTGCGTCTTCAAATTGTTCTCTCGCGGTCTCTTCCGTGGCGAGATCGAGCGGCCCGATGGCGAGGCGAATTCCGGTGCCAGTTCTATTGTGTATAAGATCATTGAGTCTAGAGGACATGATCTGCTAAATCAGAACCTGTCCAAACTGATTTGGGATGGACAAAGTCTAAAGTGA MSVSQTLGGTSRCGRAIGPSLDKIVKNAAWRKHSHLVSSCKSVLDKLDSIGEAALDPASPLAGLSPADAEFVLQPLLLALDAAYVKVAEPALECVFKLFSRGLFRGEIERPDGEANSGASSIVYKIIESRGHDLLNQNLSKLIWDGQSLK Homology
BLAST of Lcy08g003600 vs. ExPASy Swiss-Prot
Match: F4JSZ5 (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Arabidopsis thaliana OX=3702 GN=BIG1 PE=2 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.3e-36 Identity = 78/129 (60.47%), Postives = 99/129 (76.74%), Query Frame = 0
BLAST of Lcy08g003600 vs. ExPASy Swiss-Prot
Match: F4JN05 (Brefeldin A-inhibited guanine nucleotide-exchange protein 4 OS=Arabidopsis thaliana OX=3702 GN=BIG4 PE=3 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.7e-36 Identity = 76/129 (58.91%), Postives = 101/129 (78.29%), Query Frame = 0
BLAST of Lcy08g003600 vs. ExPASy Swiss-Prot
Match: Q9LZX8 (Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Arabidopsis thaliana OX=3702 GN=BIG2 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 6.6e-17 Identity = 54/149 (36.24%), Postives = 85/149 (57.05%), Query Frame = 0
BLAST of Lcy08g003600 vs. ExPASy Swiss-Prot
Match: Q9LPC5 (Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Arabidopsis thaliana OX=3702 GN=BIG3 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.3e-16 Identity = 52/148 (35.14%), Postives = 83/148 (56.08%), Query Frame = 0
BLAST of Lcy08g003600 vs. ExPASy TrEMBL
Match: A0A6J1EK91 (brefeldin A-inhibited guanine nucleotide-exchange protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111435118 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.3e-60 Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of Lcy08g003600 vs. ExPASy TrEMBL
Match: A0A6J1JLY0 (brefeldin A-inhibited guanine nucleotide-exchange protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486404 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 8.5e-60 Identity = 120/129 (93.02%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of Lcy08g003600 vs. ExPASy TrEMBL
Match: A0A6J1I124 (brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111468096 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.5e-59 Identity = 120/129 (93.02%), Postives = 125/129 (96.90%), Query Frame = 0
BLAST of Lcy08g003600 vs. ExPASy TrEMBL
Match: A0A6J1GKW8 (brefeldin A-inhibited guanine nucleotide-exchange protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455305 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.2e-59 Identity = 119/129 (92.25%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of Lcy08g003600 vs. ExPASy TrEMBL
Match: A0A0A0K1N6 (SEC7 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G027890 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.8e-58 Identity = 121/130 (93.08%), Postives = 124/130 (95.38%), Query Frame = 0
BLAST of Lcy08g003600 vs. NCBI nr
Match: XP_023529567.1 (brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 242.3 bits (617), Expect = 2.7e-60 Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of Lcy08g003600 vs. NCBI nr
Match: XP_022928224.1 (brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Cucurbita moschata]) HSP 1 Score: 242.3 bits (617), Expect = 2.7e-60 Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of Lcy08g003600 vs. NCBI nr
Match: KAG7022782.1 (Brefeldin A-inhibited guanine nucleotide-exchange protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 241.9 bits (616), Expect = 3.6e-60 Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of Lcy08g003600 vs. NCBI nr
Match: KAG6589075.1 (Brefeldin A-inhibited guanine nucleotide-exchange protein 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 241.9 bits (616), Expect = 3.6e-60 Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of Lcy08g003600 vs. NCBI nr
Match: KAG6589066.1 (Brefeldin A-inhibited guanine nucleotide-exchange protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 241.9 bits (616), Expect = 3.6e-60 Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 0
BLAST of Lcy08g003600 vs. TAIR 10
Match: AT4G38200.1 (SEC7-like guanine nucleotide exchange family protein ) HSP 1 Score: 154.1 bits (388), Expect = 9.1e-38 Identity = 78/129 (60.47%), Postives = 99/129 (76.74%), Query Frame = 0
BLAST of Lcy08g003600 vs. TAIR 10
Match: AT4G35380.1 (SEC7-like guanine nucleotide exchange family protein ) HSP 1 Score: 153.7 bits (387), Expect = 1.2e-37 Identity = 76/129 (58.91%), Postives = 101/129 (78.29%), Query Frame = 0
BLAST of Lcy08g003600 vs. TAIR 10
Match: AT3G60860.1 (SEC7-like guanine nucleotide exchange family protein ) HSP 1 Score: 88.6 bits (218), Expect = 4.7e-18 Identity = 54/149 (36.24%), Postives = 85/149 (57.05%), Query Frame = 0
BLAST of Lcy08g003600 vs. TAIR 10
Match: AT1G01960.1 (SEC7-like guanine nucleotide exchange family protein ) HSP 1 Score: 85.1 bits (209), Expect = 5.2e-17 Identity = 52/148 (35.14%), Postives = 83/148 (56.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|