Lcy08g002740 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g002740
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pectin lyase-like superfamily protein
Location	Chr08: 4044968 .. 4046879 (-)
RNA-Seq Expression	Lcy08g002740
Synteny	Lcy08g002740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCAGCTAAGAAGCACTTTGATTCCATTCATTCTCTTTGTGGCGTTACTGAATTCGAGTTTTGGTGATTCATTGTCATTGAATGTTGTTAGTTTTGGAGCCAAGCCGGATGGCAAAACCGACTCAACACAGGCGTTTCAAACCGCATGGGCCAATGCATGTGGCTCCATAAAACCAGCCACTGTCTATGTGCCTCGAGGGAGATATTACCTTCGAAGTGGAACCTTCAATGGACCTTGCAAGAACAATGCCATCTTTATTCGCATCGATGGTACTCTCGTGGCTCCTTCAGACTTTCGAGTTATTGGCAACAGTGTAGCTTGGATCATGTTTAGGCACGTCGATGGAGTTACTGTCTCGGGTGGCAATCTTGATGGGAAAGGAACTGCTTTGTGGGCTTGTAAAAATTCGACCAAGACTTGCCCAAGTGGCGCCTCGGTATGCAAATGTTTCGTTATTTTAGCCCTATTTGATAACCGTTTGGCTTTTGAAAATTAAGCTTATAAACACTAGTTCTACCTATTGATTTTTTTTTTTTTTTTTTTTTGTTATCTACCTCTTACCTGTGTTTTCAAAACCCAAATCTTCACAACCCAAATCAAGTTTTGAAAACTAAAAAATATATATATAGTTTTCAAAAACTTGTTTTTCTTTTTGGAATTTGGCTAAGAATTCAAATGAGATCTTAACAAAGCGAAAACAGAAAATAAGTGTACGTAATTTTCAAAAACCAAAAACCAAAATTCAAATGGTTATCATCACACGGACCTTAATTTAATTTCTTGTTTATTTGTGAATGATATTGTGCAGACACTTGAATTTTCCAACTCCAAAAATGTGGTGGTCAGTGCATTAACATCACTTAATAGCCAAATGTTCCACATAGTCATCAATGGTTGCCAGAATATCAAAATGAAAGGGCTTAAGGTCTTGGCCTCTGGCAATAGTCCCAACACCGATGGTATTCACGTACAACTTTCGTCTAACGTGACCATACTAAACTCCAAAATAGGCACCGGAGATGATTGTATTTCCATCGGCCCTGGCACCTCCAACCTATGGATTGAAAATATCGTGTGCGGACCTGGTCATGGAATAAGGTACACACTCGATCATCATTATGATATACAGAAAAACAAGTGTAAAACGTATAAGTTTGTATGTCTTGGTTTGGGTTCGCAGCATTGGAAGTTTGGCAAAGGACCTAAAGGAGGCTGGAGTGGAAAACGTGACAGTGAAAAAAGCTTTCTTTTCACGCACTCAAAATGGGGTAAGAATCAAAGCATGGGGAAAACCGAGCAATGGGTTTGCTCGAAACATTCTTTTCCAACATATCGTAATGGACAACGTCCAAAATCCAATCGTTATCGATCAAAACTATTGCCCAAGCCACAAAGGTTGTCCAGGCCAGGTACGAATATTCTCAATATTTCGTACATAGCGATAACATTAAATAGGTTTCTAACTCTCGGTTTTGAATATAATTTGCTTATTCTCTATATCATATATTATAGGCATCTGGGGTTAAAATCAGTGATGTGACATACCAAGACATCCATGGAACATCAGCCACTCAAGTTGCAGTGAAGTTTGATTGTAGTCCAAAAAATCCATGTGTTGGAATAAGGTTGGAGGATGTGAAATTGACTTATATGAATCAAACAGCTCAAGCAACATGTAGCCATGCAGGAGGGATTGTGGCAGGTCTTGTTGAACCCACTAGTTGCTTCTAGTTCTAGGGGATAAACTACAAATTCAATGGATTTGAAAATATTTATGTTATGAGTATAGAGTGGTTTGCAATTTATGTATAGTTTTGGTAAGGAAATTTAATTTGATATTCATTATTTGTGTTAAATGTATTGTTATTTTCTGAAGTCCCCTATTTATACTTGAATAAATATCATAA

mRNA sequence

ATGAGGCAGCTAAGAAGCACTTTGATTCCATTCATTCTCTTTGTGGCGTTACTGAATTCGAGTTTTGGTGATTCATTGTCATTGAATGTTGTTAGTTTTGGAGCCAAGCCGGATGGCAAAACCGACTCAACACAGGCGTTTCAAACCGCATGGGCCAATGCATGTGGCTCCATAAAACCAGCCACTGTCTATGTGCCTCGAGGGAGATATTACCTTCGAAGTGGAACCTTCAATGGACCTTGCAAGAACAATGCCATCTTTATTCGCATCGATGGTACTCTCGTGGCTCCTTCAGACTTTCGAGTTATTGGCAACAGTGTAGCTTGGATCATGTTTAGGCACGTCGATGGAGTTACTGTCTCGGGTGGCAATCTTGATGGGAAAGGAACTGCTTTGTGGGCTTGTAAAAATTCGACCAAGACTTGCCCAAGTGGCGCCTCGACACTTGAATTTTCCAACTCCAAAAATGTGGTGGTCAGTGCATTAACATCACTTAATAGCCAAATGTTCCACATAGTCATCAATGGTTGCCAGAATATCAAAATGAAAGGGCTTAAGGTCTTGGCCTCTGGCAATAGTCCCAACACCGATGGTATTCACGTACAACTTTCGTCTAACGTGACCATACTAAACTCCAAAATAGGCACCGGAGATGATTGTATTTCCATCGGCCCTGGCACCTCCAACCTATGGATTGAAAATATCGTGTGCGGACCTGGTCATGGAATAAGCATTGGAAGTTTGGCAAAGGACCTAAAGGAGGCTGGAGTGGAAAACGTGACAGTGAAAAAAGCTTTCTTTTCACGCACTCAAAATGGGGTAAGAATCAAAGCATGGGGAAAACCGAGCAATGGGTTTGCTCGAAACATTCTTTTCCAACATATCGTAATGGACAACGTCCAAAATCCAATCGTTATCGATCAAAACTATTGCCCAAGCCACAAAGGTTGTCCAGGCCAGGCATCTGGGGTTAAAATCAGTGATGTGACATACCAAGACATCCATGGAACATCAGCCACTCAAGTTGCAGTGAAGTTTGATTGTAGTCCAAAAAATCCATGTGTTGGAATAAGGTTGGAGGATGTGAAATTGACTTATATGAATCAAACAGCTCAAGCAACATGTAGCCATGCAGGAGGGATTGTGGCAGGTCTTGTTGAACCCACTAGTTGCTTCTAGTTCTAGGGGATAAACTACAAATTCAATGGATTTGAAAATATTTATGTTATGAGTATAGAGTGGTTTGCAATTTATGTATAGTTTTGGTAAGGAAATTTAATTTGATATTCATTATTTGTGTTAAATGTATTGTTATTTTCTGAAGTCCCCTATTTATACTTGAATAAATATCATAA

Coding sequence (CDS)

ATGAGGCAGCTAAGAAGCACTTTGATTCCATTCATTCTCTTTGTGGCGTTACTGAATTCGAGTTTTGGTGATTCATTGTCATTGAATGTTGTTAGTTTTGGAGCCAAGCCGGATGGCAAAACCGACTCAACACAGGCGTTTCAAACCGCATGGGCCAATGCATGTGGCTCCATAAAACCAGCCACTGTCTATGTGCCTCGAGGGAGATATTACCTTCGAAGTGGAACCTTCAATGGACCTTGCAAGAACAATGCCATCTTTATTCGCATCGATGGTACTCTCGTGGCTCCTTCAGACTTTCGAGTTATTGGCAACAGTGTAGCTTGGATCATGTTTAGGCACGTCGATGGAGTTACTGTCTCGGGTGGCAATCTTGATGGGAAAGGAACTGCTTTGTGGGCTTGTAAAAATTCGACCAAGACTTGCCCAAGTGGCGCCTCGACACTTGAATTTTCCAACTCCAAAAATGTGGTGGTCAGTGCATTAACATCACTTAATAGCCAAATGTTCCACATAGTCATCAATGGTTGCCAGAATATCAAAATGAAAGGGCTTAAGGTCTTGGCCTCTGGCAATAGTCCCAACACCGATGGTATTCACGTACAACTTTCGTCTAACGTGACCATACTAAACTCCAAAATAGGCACCGGAGATGATTGTATTTCCATCGGCCCTGGCACCTCCAACCTATGGATTGAAAATATCGTGTGCGGACCTGGTCATGGAATAAGCATTGGAAGTTTGGCAAAGGACCTAAAGGAGGCTGGAGTGGAAAACGTGACAGTGAAAAAAGCTTTCTTTTCACGCACTCAAAATGGGGTAAGAATCAAAGCATGGGGAAAACCGAGCAATGGGTTTGCTCGAAACATTCTTTTCCAACATATCGTAATGGACAACGTCCAAAATCCAATCGTTATCGATCAAAACTATTGCCCAAGCCACAAAGGTTGTCCAGGCCAGGCATCTGGGGTTAAAATCAGTGATGTGACATACCAAGACATCCATGGAACATCAGCCACTCAAGTTGCAGTGAAGTTTGATTGTAGTCCAAAAAATCCATGTGTTGGAATAAGGTTGGAGGATGTGAAATTGACTTATATGAATCAAACAGCTCAAGCAACATGTAGCCATGCAGGAGGGATTGTGGCAGGTCTTGTTGAACCCACTAGTTGCTTCTAG

Protein sequence

MRQLRSTLIPFILFVALLNSSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPATVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVSGGNLDGKGTALWACKNSTKTCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNIKMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLEDVKLTYMNQTAQATCSHAGGIVAGLVEPTSCF

Homology

[Close]

BLAST of Lcy08g002740 vs. ExPASy Swiss-Prot
Match: P48979 (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 9.7e-161
Identity = 270/392 (68.88%), Postives = 320/392 (81.63%), Query Frame = 0


Query: 1   MRQLRSTLIPFILFVALLNSSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKP 60
           M   RS     ++FV ++NS+    L+ NV S GAK DGKTDST+AF +AWA AC S+ P
Sbjct: 1   MANRRSLFSLSLIFVFMINSAIASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMNP 60

Query: 61  ATVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTV 120
             +YVP G ++LR   F+GPCKNNAI  RI GTLVAPSD+RVIGN+  WI F HV+GVT+
Sbjct: 61  GVIYVPAGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTI 120

Query: 121 SGGNLDGKGTALWACKN-STKTCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQN 180
           SGG LDG+GTALWACK    ++CPSGA+TL FS+S N+VVS L SLNSQMFHIVIN  QN
Sbjct: 121 SGGILDGQGTALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQN 180

Query: 181 IKMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGP 240
           ++M+G++V  SGNSPNTDGIHVQ+SS VTILNSKI TGDDC+SIGPGTSNLWIE + CGP
Sbjct: 181 VQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGP 240

Query: 241 GHGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 300
           GHGISIGSL K+ +EAGV+NVTVK   FS TQNG+RIK+WG+PS GFARNILFQH  M N
Sbjct: 241 GHGISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVN 300

Query: 301 VQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRL 360
           V+NPIVIDQ+YCP +KGCPGQ SGV+ISDVTY+DIHGTSAT+VAVKFDCSPK+PC  I+L
Sbjct: 301 VENPIVIDQHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKL 360

Query: 361 EDVKLTYMNQTAQATCSHAGGIVAGLVEPTSC 392
           EDVKLTY NQ A+++CSHA G   G+V+PTSC
Sbjct: 361 EDVKLTYKNQAAESSCSHADGTTEGVVQPTSC 392

[Close]

BLAST of Lcy08g002740 vs. ExPASy Swiss-Prot
Match: O22818 (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.5e-116
Identity = 208/367 (56.68%), Postives = 264/367 (71.93%), Query Frame = 0


Query: 27  SLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPATVYVPRGRYYLRSGTFNG-PCKNNA 86
           +LNV+S+GAKPDG  DST+AF  AW  AC S  P T+ VP+GR+ + +  F+G  CK   
Sbjct: 32  TLNVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVPKGRFLVGNLVFHGNECKQAP 91

Query: 87  IFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVSGGNLDGKGTALWACKNS-TKTCPS 146
           I IRI G++VAP DFR+I +S  WI F  V  V++ GG LD +GT+LW CKN+    CP+
Sbjct: 92  ISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPT 151

Query: 147 GASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNIKMKGLKVLASGNSPNTDGIHVQLS 206
           GA +L FS S N+ +S LTS+NSQ FHIVI+   N+ + G+KV A  NSPNTDGIHV+ S
Sbjct: 152 GAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESS 211

Query: 207 SNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAKDLKEAGVENVTVKK 266
            +V I NS+IGTGDDCISIGPG++N++I+ I CGPGHGISIGSL +  +E GV+NVTV  
Sbjct: 212 HSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSN 271

Query: 267 AFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGCPGQASGV 326
             F  T NGVRIK WGK SN FARNI+FQHI M  V+NPI+IDQ+YC  HK CP Q SGV
Sbjct: 272 VDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYC-LHKPCPKQESGV 331

Query: 327 KISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLEDVKLTYMNQTAQATCSHAGGIVAG 386
           K+S+V Y+DIHGTS T+VAV  DCS + PC GI ++DV L  +++ AQA+C +A G    
Sbjct: 332 KVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLVSVHRPAQASCDNANGSAND 391

Query: 387 LVEPTSC 392
           +V  T C
Sbjct: 392 VVPFTPC 397

[Close]

BLAST of Lcy08g002740 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 8.4e-80
Identity = 163/366 (44.54%), Postives = 218/366 (59.56%), Query Frame = 0


Query: 29  NVVSFGAKPDGKTDSTQAFQTAWANACGSIKPATVYVPRGRYYLRSGTFNGPCKNNAIFI 88
           NV  +GAK  G  D +QA   AW  AC S  P+TV +P+G Y +      GPCK + I  
Sbjct: 11  NVNDYGAK--GAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKIGF 70

Query: 89  RIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVSG-GNLDGKGTALWACKNSTK--TCPSG 148
           +IDG + AP+D      S  W+ F  +DG+TVSG G LDG+G   WA  N  K   C   
Sbjct: 71  QIDGVVKAPADPSKF-KSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHA 130

Query: 149 ASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNIKMKGLKVLASGNSPNTDGIHVQLSS 208
           A  L F   K+ +V  +TSLNS+MFHI +  C++I  + + V A G S NTDGIHV +S 
Sbjct: 131 AMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISK 190

Query: 209 NVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAKDLKEAGVENVTVKKA 268
            VTI N+KI TGDDCISIGPG+ N+ I  + CGPGHGISIGSL +   E  V  +TVK  
Sbjct: 191 GVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGC 250

Query: 269 FFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGCPGQA-SGV 328
            FS T NGVR+K W     G A ++ FQ + M+NVQNP+++DQ YCP +  C  QA S +
Sbjct: 251 TFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCP-YGQCSRQAPSRI 310

Query: 329 KISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLEDVKLTYMNQ--TAQATCSHAGGIV 388
           K+S++ + +I GTS  +VAV   CS   PC  +++ ++ L+Y      A +TCS+     
Sbjct: 311 KLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTF 370

[Close]

BLAST of Lcy08g002740 vs. ExPASy Swiss-Prot
Match: Q8RY29 (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 293.9 bits (751), Expect = 2.7e-78
Identity = 169/383 (44.13%), Postives = 232/383 (60.57%), Query Frame = 0


Query: 16  ALLNSSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPATVYVPRGR-YYLRS 75
           + + +S     +++V  FGAK DGKTD TQAF  AW  AC S     + VP+G  Y L+S
Sbjct: 56  SFVRASLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKS 115

Query: 76  GTFNGPCKNNAIFIRIDGTLVAP---SDFRVIGNSVAWIMFRHVDGVTVSGGN---LDGK 135
               GPC N+ + ++I GTL A    SD++ I     WIMF  V+ ++V GG+   +DG 
Sbjct: 116 IQLTGPC-NSILTVQIFGTLSASQKRSDYKDISK---WIMFDGVNNLSVDGGDTGVVDGN 175

Query: 136 GTALW--ACK-NSTKTCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNIKMKGL 195
           G   W  +CK N  K C    + L F NSK+++V  L   N+Q   I I  C N+++  +
Sbjct: 176 GETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNV 235

Query: 196 KVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISI 255
            V A  +SPNTDGIH+  + N+ +  S IGTGDDCISI  G+ N+ I +I CGPGHGISI
Sbjct: 236 VVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISI 295

Query: 256 GSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIV 315
           GSL  D  +A V  VTV  A  S T NGVRIK + +  +G A NI+FQ+I MDNV+NPI+
Sbjct: 296 GSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTY-QGGSGTASNIIFQNIQMDNVKNPII 355

Query: 316 IDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLEDVKLT 375
           IDQ+YC   K C  + S V++ +V Y+DI GTSA++ A+ F+CS   PC GI L+ V + 
Sbjct: 356 IDQDYCDKSK-CTTEKSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNI- 415

Query: 376 YMNQTAQATCSHAGGIVAGLVEP 389
              +  +ATC++A  +  G V P
Sbjct: 416 ---KGGKATCTNANVVDKGAVLP 428

[Close]

BLAST of Lcy08g002740 vs. ExPASy Swiss-Prot
Match: P49063 (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 292.4 bits (747), Expect = 7.9e-78
Identity = 156/371 (42.05%), Postives = 218/371 (58.76%), Query Frame = 0


Query: 27  SLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPATVYVPRGRYYLRSGTFNGPCKNNAI 86
           +++V + GAK D KTD + AF  AW  AC +   +T+ VP+G Y + S  F GPCK   +
Sbjct: 69  AVDVKASGAKGDSKTDDSAAFAAAWKEACAA--GSTITVPKGEYMVESLEFKGPCK-GPV 128

Query: 87  FIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVSGGN--LDGKGTALWACKNSTKT--C 146
            + ++G   AP+  +       WI F ++   T++G     DG+G+  W   +  KT  C
Sbjct: 129 TLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKC 188

Query: 147 PSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNIKMKGLKVLASGNSPNTDGIHVQ 206
            S    + F+   N  ++++TS NS++FH+ I  C+NI +  + + A   S NTDGIH+ 
Sbjct: 189 NSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIG 248

Query: 207 LSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAKDLKEAGVENVTV 266
            S+ V ++ +KI TGDDC+SIG GT NL +EN+ CGPGHGISIGSL +   E  V+ VTV
Sbjct: 249 RSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTV 308

Query: 267 KKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGCPGQAS 326
           +K     T NGVRIK W     G A NILF+ I MDNV  P++IDQ YCP      G  S
Sbjct: 309 RKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPS 368

Query: 327 GVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLEDVKLTYMNQ--TAQATCSHAGG 386
            VK+SDVT + I GTSAT+VAVK  CS   PC  I L D+ L +  +   A + CS+   
Sbjct: 369 QVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKP 428

Query: 387 IVAGLVEPTSC 392
           I++G + P +C
Sbjct: 429 ILSGKLVPAAC 436

[Close]

BLAST of Lcy08g002740 vs. ExPASy TrEMBL
Match: A0A5D3DTW1 (Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold876G00270 PE=3 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.4e-191
Identity = 329/393 (83.72%), Postives = 362/393 (92.11%), Query Frame = 0


Query: 3   QLRSTLIPFILFVALLN-SSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPA 62
           +++S+ I  I+ VAL+N  +FG++ S NVVSFG K DG+TDSTQAFQT W+NAC SIKPA
Sbjct: 8   KIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPA 67

Query: 63  TVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVS 122
           T+YVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDF+VIGNS AWI FR+VDGVTVS
Sbjct: 68  TIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVS 127

Query: 123 GGNLDGKGTALWACKNSTK--TCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQN 182
           GGNLDGKG  LWACKNS+   TCPSGA+TL+FSNSKNVVVSALTSLNSQMFHIVINGCQN
Sbjct: 128 GGNLDGKGAGLWACKNSSSSTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVINGCQN 187

Query: 183 IKMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGP 242
           + MKG+KVLASGNSPNTDGIHVQ+SSNV +LNSKIGTGDDCISIGPGTSNL IENIVCGP
Sbjct: 188 VTMKGIKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPGTSNLRIENIVCGP 247

Query: 243 GHGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 302
           GHGISIGSLAKDL+E GV+NVTVK   FSRTQNGVRIKAWGKPSNGFAR ILFQHIVMDN
Sbjct: 248 GHGISIGSLAKDLQEEGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARKILFQHIVMDN 307

Query: 303 VQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRL 362
           VQNPIVIDQNYCP HKGCPG+ASGVKI+DVTYQDIHGTSAT+VAVKFDCSP NPCVGI+L
Sbjct: 308 VQNPIVIDQNYCPRHKGCPGKASGVKINDVTYQDIHGTSATKVAVKFDCSPTNPCVGIKL 367

Query: 363 EDVKLTYMNQTAQATCSHAGGIVAGLVEPTSCF 393
           E+V+LT+MNQTAQATC++ GGI AGLV+PTSCF
Sbjct: 368 ENVRLTHMNQTAQATCNNVGGIAAGLVQPTSCF 400

[Close]

BLAST of Lcy08g002740 vs. ExPASy TrEMBL
Match: A0A5D3C3E8 (Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001500 PE=3 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.1e-190
Identity = 325/393 (82.70%), Postives = 360/393 (91.60%), Query Frame = 0


Query: 3   QLRSTLIPFILFVALLN-SSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPA 62
           +++S+ I  I+ VAL+N  +FG++ S NVVSFG K DG+TDSTQAFQT W+NAC S KP 
Sbjct: 8   KIKSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACASTKPT 67

Query: 63  TVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVS 122
           T+YVPRGRYYLRSG FNGPCKNNAIFIRIDGTLVAPSDF+VIGNS AWI+FRHVDGVTVS
Sbjct: 68  TIYVPRGRYYLRSGIFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIIFRHVDGVTVS 127

Query: 123 GGNLDGKGTALWACKNSTK--TCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQN 182
           GGNLDGKG  LWACKNS+   TCP+GA+TL+FSNSKNVV+SALTSLNSQMFHIVINGCQN
Sbjct: 128 GGNLDGKGAGLWACKNSSSRTTCPTGATTLQFSNSKNVVISALTSLNSQMFHIVINGCQN 187

Query: 183 IKMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGP 242
           + MKGLKVLASGNSPNTDGIHVQ+SSNV +LNSKIGTGDDCISIGPGTSNL IENIVCGP
Sbjct: 188 VTMKGLKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPGTSNLHIENIVCGP 247

Query: 243 GHGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 302
           GHGISIGSLAKD++E GV+NVTVK   FSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN
Sbjct: 248 GHGISIGSLAKDVQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 307

Query: 303 VQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRL 362
           VQNPIVIDQNYCPSHKGCP +ASGVKI+DVTYQDIHGTSAT++AVKFDCSP NPC GI+L
Sbjct: 308 VQNPIVIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKIAVKFDCSPTNPCGGIKL 367

Query: 363 EDVKLTYMNQTAQATCSHAGGIVAGLVEPTSCF 393
           E+V+LTYMNQTAQATC++ GGI AGLV+PTSCF
Sbjct: 368 ENVRLTYMNQTAQATCNNVGGIAAGLVQPTSCF 400

[Close]

BLAST of Lcy08g002740 vs. ExPASy TrEMBL
Match: A0A5A7VKX0 (Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00120 PE=3 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.7e-190
Identity = 324/393 (82.44%), Postives = 360/393 (91.60%), Query Frame = 0


Query: 3   QLRSTLIPFILFVALLN-SSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPA 62
           +++S+ I  I+ VAL+N  +FG++ S NVVSFG K DG+TDSTQAFQT W+NAC S KP 
Sbjct: 8   KIKSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACASTKPT 67

Query: 63  TVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVS 122
           T+YVPRGRYYLRSG FNGPCKNNAIFIRIDGTLVAPSDF+VIGNS AWI+FRHVDGVTVS
Sbjct: 68  TIYVPRGRYYLRSGIFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIIFRHVDGVTVS 127

Query: 123 GGNLDGKGTALWACKNSTK--TCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQN 182
           GGNLDGKG  LWACKNS+   TCP+GA+TL+FSNSKNVV+SALTSLNSQMFHIVINGCQN
Sbjct: 128 GGNLDGKGAGLWACKNSSSRTTCPTGATTLQFSNSKNVVISALTSLNSQMFHIVINGCQN 187

Query: 183 IKMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGP 242
           + MKGLKVLASGNSPNTDGIHVQ+SSNV +LNSKIGTGDDCISIGPGTSNL IENIVCGP
Sbjct: 188 VTMKGLKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPGTSNLHIENIVCGP 247

Query: 243 GHGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 302
           GHGISIGSLAKD++E GV+NVTVK   FSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN
Sbjct: 248 GHGISIGSLAKDVQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 307

Query: 303 VQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRL 362
           VQNPI+IDQNYCPSHKGCP +ASGVKI+DVTYQDIHGTSAT++AVKFDCSP NPC GI+L
Sbjct: 308 VQNPIIIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKIAVKFDCSPTNPCGGIKL 367

Query: 363 EDVKLTYMNQTAQATCSHAGGIVAGLVEPTSCF 393
           E+V+LTYMNQTAQATC++ GGI AGLV+PTSCF
Sbjct: 368 ENVRLTYMNQTAQATCNNVGGIAAGLVQPTSCF 400

[Close]

BLAST of Lcy08g002740 vs. ExPASy TrEMBL
Match: A0A5A7TUJ2 (Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G001030 PE=3 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 7.9e-190
Identity = 326/393 (82.95%), Postives = 360/393 (91.60%), Query Frame = 0


Query: 3   QLRSTLIPFILFVALLN-SSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPA 62
           +++S+ I  I+ VAL+N  +FG++ S NVVSFG K DG+TDSTQAFQT W+NAC S KPA
Sbjct: 8   KIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSTKPA 67

Query: 63  TVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVS 122
           T+YVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDF+VIGNS AWI FR+VDGVTVS
Sbjct: 68  TIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVS 127

Query: 123 GGNLDGKGTALWACKNSTK--TCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQN 182
           GGNLDGKG  LWACKNS+   TCPSGA+TL+FSNSKNVVVSALTSLNSQMFHIVINGCQN
Sbjct: 128 GGNLDGKGAGLWACKNSSSSTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVINGCQN 187

Query: 183 IKMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGP 242
           + M+G+KVLASGNSPNTDGIH Q+SSNV +LNSKIGTGDDCISIGPGTSNL IENIVCGP
Sbjct: 188 VTMRGIKVLASGNSPNTDGIHGQMSSNVAVLNSKIGTGDDCISIGPGTSNLRIENIVCGP 247

Query: 243 GHGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 302
           GHGISIGSLAKDL+E GV+NVTVK   FSRTQNGVRIKAWGKPSNGFAR ILFQHIVMDN
Sbjct: 248 GHGISIGSLAKDLQEEGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARKILFQHIVMDN 307

Query: 303 VQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRL 362
           VQNPIVIDQNYCP HKGCPG+ASGVKI+DVTYQDIHGTSAT+VAVKFDCSP NPCVGI+L
Sbjct: 308 VQNPIVIDQNYCPRHKGCPGKASGVKINDVTYQDIHGTSATKVAVKFDCSPTNPCVGIKL 367

Query: 363 EDVKLTYMNQTAQATCSHAGGIVAGLVEPTSCF 393
           E+V+LT+MNQTAQATC++ GGI AGLV+PTSCF
Sbjct: 368 ENVRLTHMNQTAQATCNNVGGIAAGLVQPTSCF 400

[Close]

BLAST of Lcy08g002740 vs. ExPASy TrEMBL
Match: A0A6J1EJA0 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434653 PE=3 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 3.9e-189
Identity = 324/391 (82.86%), Postives = 354/391 (90.54%), Query Frame = 0


Query: 1   MRQLRSTLIPFILFVALLNSSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKP 60
           M  LR  L+ F  F+  LNSS   + S NVVS GAKPDGK+DST+AF+TAWANACGSI+P
Sbjct: 1   MTILRGFLLVFFPFM-FLNSSSAIAFSNNVVSLGAKPDGKSDSTKAFETAWANACGSIRP 60

Query: 61  ATVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTV 120
            ++YVP GRYYLRS TFNGPCKNNAIFIRIDGTLVAPSD++VIGNS AWI+FR VDGVT+
Sbjct: 61  TSIYVPPGRYYLRSVTFNGPCKNNAIFIRIDGTLVAPSDYKVIGNSAAWILFRGVDGVTI 120

Query: 121 SGGNLDGKGTALWACKNSTKTCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNI 180
           SGG  DGKG+ LWACKNSTKTCPSGA+T+E SNSKNVV+SALTSLNSQMFHIV+NGCQNI
Sbjct: 121 SGGIFDGKGSGLWACKNSTKTCPSGATTIEISNSKNVVLSALTSLNSQMFHIVVNGCQNI 180

Query: 181 KMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPG 240
           KMKGLKVLASGNSPNTDGIHVQLSS+V ILNSKIGTGDDCISIGPGTSNLWIENIVCGPG
Sbjct: 181 KMKGLKVLASGNSPNTDGIHVQLSSDVIILNSKIGTGDDCISIGPGTSNLWIENIVCGPG 240

Query: 241 HGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNV 300
           HGISIGSLAKDL+EAGV+NVTVKKA FSRTQNGVRIKAWG+PSNGF +NILFQHIVMDNV
Sbjct: 241 HGISIGSLAKDLQEAGVQNVTVKKALFSRTQNGVRIKAWGRPSNGFVKNILFQHIVMDNV 300

Query: 301 QNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLE 360
           QNPIVIDQNYCPSHK CPG+ASGVKISDVTYQDIHGTSATQ+AVKFDCSP NPC GI++E
Sbjct: 301 QNPIVIDQNYCPSHKDCPGKASGVKISDVTYQDIHGTSATQIAVKFDCSPTNPCSGIKME 360

Query: 361 DVKLTYMNQTAQATCSHAGGIVAGLVEPTSC 392
           DVKL+Y +Q A ATCSHAGG   G VEP+SC
Sbjct: 361 DVKLSYKDQIAGATCSHAGGTATGSVEPSSC 390

[Close]

BLAST of Lcy08g002740 vs. NCBI nr
Match: XP_038888714.1 (polygalacturonase-like [Benincasa hispida])

HSP 1 Score: 681.4 bits (1757), Expect = 4.6e-192
Identity = 323/375 (86.13%), Postives = 352/375 (93.87%), Query Frame = 0


Query: 20  SSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPATVYVPRGRYYLRSGTFNG 79
           S FG++ S NVVSFGAK DG+TDSTQAFQ  W+NAC S KP T+YVPRGRYYL+SGTF+G
Sbjct: 4   SVFGNAWSYNVVSFGAKGDGRTDSTQAFQRTWSNACASTKPVTIYVPRGRYYLQSGTFDG 63

Query: 80  PCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVSGGNLDGKGTALWACKNS- 139
           PC NNAIFIRIDGTLVAPSDFRVIGNS AWI+FRH+DGVT+SGGNLDGKG ALWACKNS 
Sbjct: 64  PCNNNAIFIRIDGTLVAPSDFRVIGNSAAWILFRHIDGVTISGGNLDGKGAALWACKNSS 123

Query: 140 -TKTCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNIKMKGLKVLASGNSPNTD 199
            + TCP+GA+TLEFSNSKNVVVSALTSLNSQMFHIVINGCQN+ MKGLKVLASG+SPNTD
Sbjct: 124 TSTTCPTGATTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNVMMKGLKVLASGHSPNTD 183

Query: 200 GIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAKDLKEAGV 259
           GIHVQLSS+VTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAKDL+E GV
Sbjct: 184 GIHVQLSSDVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAKDLQEPGV 243

Query: 260 ENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGC 319
           +N+TVK   FSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGC
Sbjct: 244 QNITVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGC 303

Query: 320 PGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLEDVKLTYMNQTAQATCSH 379
           PG+ASGVKI+DVTYQDIHGTSAT++A+KFDCSP NPCV I+LEDV+LTYMNQTAQATC++
Sbjct: 304 PGKASGVKINDVTYQDIHGTSATEIAIKFDCSPTNPCVRIKLEDVRLTYMNQTAQATCNN 363

Query: 380 AGGIVAGLVEPTSCF 393
            GGIVAGLV+PTSCF
Sbjct: 364 VGGIVAGLVQPTSCF 378

[Close]

BLAST of Lcy08g002740 vs. NCBI nr
Match: TYK26944.1 (polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 678.7 bits (1750), Expect = 3.0e-191
Identity = 329/393 (83.72%), Postives = 362/393 (92.11%), Query Frame = 0


Query: 3   QLRSTLIPFILFVALLN-SSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPA 62
           +++S+ I  I+ VAL+N  +FG++ S NVVSFG K DG+TDSTQAFQT W+NAC SIKPA
Sbjct: 8   KIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSIKPA 67

Query: 63  TVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVS 122
           T+YVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDF+VIGNS AWI FR+VDGVTVS
Sbjct: 68  TIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVS 127

Query: 123 GGNLDGKGTALWACKNSTK--TCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQN 182
           GGNLDGKG  LWACKNS+   TCPSGA+TL+FSNSKNVVVSALTSLNSQMFHIVINGCQN
Sbjct: 128 GGNLDGKGAGLWACKNSSSSTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVINGCQN 187

Query: 183 IKMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGP 242
           + MKG+KVLASGNSPNTDGIHVQ+SSNV +LNSKIGTGDDCISIGPGTSNL IENIVCGP
Sbjct: 188 VTMKGIKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPGTSNLRIENIVCGP 247

Query: 243 GHGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 302
           GHGISIGSLAKDL+E GV+NVTVK   FSRTQNGVRIKAWGKPSNGFAR ILFQHIVMDN
Sbjct: 248 GHGISIGSLAKDLQEEGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARKILFQHIVMDN 307

Query: 303 VQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRL 362
           VQNPIVIDQNYCP HKGCPG+ASGVKI+DVTYQDIHGTSAT+VAVKFDCSP NPCVGI+L
Sbjct: 308 VQNPIVIDQNYCPRHKGCPGKASGVKINDVTYQDIHGTSATKVAVKFDCSPTNPCVGIKL 367

Query: 363 EDVKLTYMNQTAQATCSHAGGIVAGLVEPTSCF 393
           E+V+LT+MNQTAQATC++ GGI AGLV+PTSCF
Sbjct: 368 ENVRLTHMNQTAQATCNNVGGIAAGLVQPTSCF 400

[Close]

BLAST of Lcy08g002740 vs. NCBI nr
Match: TYK06443.1 (polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 4.3e-190
Identity = 325/393 (82.70%), Postives = 360/393 (91.60%), Query Frame = 0


Query: 3   QLRSTLIPFILFVALLN-SSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPA 62
           +++S+ I  I+ VAL+N  +FG++ S NVVSFG K DG+TDSTQAFQT W+NAC S KP 
Sbjct: 8   KIKSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACASTKPT 67

Query: 63  TVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVS 122
           T+YVPRGRYYLRSG FNGPCKNNAIFIRIDGTLVAPSDF+VIGNS AWI+FRHVDGVTVS
Sbjct: 68  TIYVPRGRYYLRSGIFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIIFRHVDGVTVS 127

Query: 123 GGNLDGKGTALWACKNSTK--TCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQN 182
           GGNLDGKG  LWACKNS+   TCP+GA+TL+FSNSKNVV+SALTSLNSQMFHIVINGCQN
Sbjct: 128 GGNLDGKGAGLWACKNSSSRTTCPTGATTLQFSNSKNVVISALTSLNSQMFHIVINGCQN 187

Query: 183 IKMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGP 242
           + MKGLKVLASGNSPNTDGIHVQ+SSNV +LNSKIGTGDDCISIGPGTSNL IENIVCGP
Sbjct: 188 VTMKGLKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPGTSNLHIENIVCGP 247

Query: 243 GHGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 302
           GHGISIGSLAKD++E GV+NVTVK   FSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN
Sbjct: 248 GHGISIGSLAKDVQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 307

Query: 303 VQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRL 362
           VQNPIVIDQNYCPSHKGCP +ASGVKI+DVTYQDIHGTSAT++AVKFDCSP NPC GI+L
Sbjct: 308 VQNPIVIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKIAVKFDCSPTNPCGGIKL 367

Query: 363 EDVKLTYMNQTAQATCSHAGGIVAGLVEPTSCF 393
           E+V+LTYMNQTAQATC++ GGI AGLV+PTSCF
Sbjct: 368 ENVRLTYMNQTAQATCNNVGGIAAGLVQPTSCF 400

[Close]

BLAST of Lcy08g002740 vs. NCBI nr
Match: KAA0068064.1 (polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 674.5 bits (1739), Expect = 5.6e-190
Identity = 324/393 (82.44%), Postives = 360/393 (91.60%), Query Frame = 0


Query: 3   QLRSTLIPFILFVALLN-SSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPA 62
           +++S+ I  I+ VAL+N  +FG++ S NVVSFG K DG+TDSTQAFQT W+NAC S KP 
Sbjct: 8   KIKSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACASTKPT 67

Query: 63  TVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVS 122
           T+YVPRGRYYLRSG FNGPCKNNAIFIRIDGTLVAPSDF+VIGNS AWI+FRHVDGVTVS
Sbjct: 68  TIYVPRGRYYLRSGIFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIIFRHVDGVTVS 127

Query: 123 GGNLDGKGTALWACKNSTK--TCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQN 182
           GGNLDGKG  LWACKNS+   TCP+GA+TL+FSNSKNVV+SALTSLNSQMFHIVINGCQN
Sbjct: 128 GGNLDGKGAGLWACKNSSSRTTCPTGATTLQFSNSKNVVISALTSLNSQMFHIVINGCQN 187

Query: 183 IKMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGP 242
           + MKGLKVLASGNSPNTDGIHVQ+SSNV +LNSKIGTGDDCISIGPGTSNL IENIVCGP
Sbjct: 188 VTMKGLKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPGTSNLHIENIVCGP 247

Query: 243 GHGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 302
           GHGISIGSLAKD++E GV+NVTVK   FSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN
Sbjct: 248 GHGISIGSLAKDVQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 307

Query: 303 VQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRL 362
           VQNPI+IDQNYCPSHKGCP +ASGVKI+DVTYQDIHGTSAT++AVKFDCSP NPC GI+L
Sbjct: 308 VQNPIIIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKIAVKFDCSPTNPCGGIKL 367

Query: 363 EDVKLTYMNQTAQATCSHAGGIVAGLVEPTSCF 393
           E+V+LTYMNQTAQATC++ GGI AGLV+PTSCF
Sbjct: 368 ENVRLTYMNQTAQATCNNVGGIAAGLVQPTSCF 400

[Close]

BLAST of Lcy08g002740 vs. NCBI nr
Match: KAA0046810.1 (polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 672.9 bits (1735), Expect = 1.6e-189
Identity = 326/393 (82.95%), Postives = 360/393 (91.60%), Query Frame = 0


Query: 3   QLRSTLIPFILFVALLN-SSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPA 62
           +++S+ I  I+ VAL+N  +FG++ S NVVSFG K DG+TDSTQAFQT W+NAC S KPA
Sbjct: 8   KIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNACSSTKPA 67

Query: 63  TVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVS 122
           T+YVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDF+VIGNS AWI FR+VDGVTVS
Sbjct: 68  TIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVS 127

Query: 123 GGNLDGKGTALWACKNSTK--TCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQN 182
           GGNLDGKG  LWACKNS+   TCPSGA+TL+FSNSKNVVVSALTSLNSQMFHIVINGCQN
Sbjct: 128 GGNLDGKGAGLWACKNSSSSTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVINGCQN 187

Query: 183 IKMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGP 242
           + M+G+KVLASGNSPNTDGIH Q+SSNV +LNSKIGTGDDCISIGPGTSNL IENIVCGP
Sbjct: 188 VTMRGIKVLASGNSPNTDGIHGQMSSNVAVLNSKIGTGDDCISIGPGTSNLRIENIVCGP 247

Query: 243 GHGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDN 302
           GHGISIGSLAKDL+E GV+NVTVK   FSRTQNGVRIKAWGKPSNGFAR ILFQHIVMDN
Sbjct: 248 GHGISIGSLAKDLQEEGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARKILFQHIVMDN 307

Query: 303 VQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRL 362
           VQNPIVIDQNYCP HKGCPG+ASGVKI+DVTYQDIHGTSAT+VAVKFDCSP NPCVGI+L
Sbjct: 308 VQNPIVIDQNYCPRHKGCPGKASGVKINDVTYQDIHGTSATKVAVKFDCSPTNPCVGIKL 367

Query: 363 EDVKLTYMNQTAQATCSHAGGIVAGLVEPTSCF 393
           E+V+LT+MNQTAQATC++ GGI AGLV+PTSCF
Sbjct: 368 ENVRLTHMNQTAQATCNNVGGIAAGLVQPTSCF 400

[Close]

BLAST of Lcy08g002740 vs. TAIR 10
Match: AT3G59850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 528.9 bits (1361), Expect = 3.5e-150
Identity = 247/389 (63.50%), Postives = 305/389 (78.41%), Query Frame = 0


Query: 4   LRSTLIPFILFVALLNSSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPATV 63
           + S+L+  +LF  LL+ S   + + N++S+GAKPDGKTDST+AF   WA AC S+KP T+
Sbjct: 1   MHSSLLIVLLF--LLSVSSSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTI 60

Query: 64  YVPRGRYYLRSGTFNG-PCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVSG 123
            VP+GR+ LRS  F+G  CK  ++  RI GTLVAPSD+RVIG    WI+F+H+DG++V G
Sbjct: 61  LVPKGRFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYG 120

Query: 124 GNLDGKGTALWACKNSTKTCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNIKM 183
           G LD +G +LW+CK S K CPSGA+++ F +S+NVV+S LTSLNSQMFH+ INGC N+K+
Sbjct: 121 GVLDAQGASLWSCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKL 180

Query: 184 KGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHG 243
            G+KV A GNSPNTDGIHVQ SS V+ILNSKI TGDDC+SIGPGT+ LWIEN+ CGPGHG
Sbjct: 181 DGVKVSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHG 240

Query: 244 ISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQN 303
           ISIGSL K+  E GV+N+TVK A F+ T+NGVRIK+W +PSNGFA+NI FQH VM+NVQN
Sbjct: 241 ISIGSLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQN 300

Query: 304 PIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLEDV 363
           PIVIDQNYCP ++ CP Q SG+KISDV + DIHGTSAT+V VK DCS K PC GIR++DV
Sbjct: 301 PIVIDQNYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDV 360

Query: 364 KLTYMNQTAQATCSHAGGIVAGLVEPTSC 392
           KLTY N+ A   CSHAGG  AG   P SC
Sbjct: 361 KLTYRNKPATTDCSHAGGSEAGFQRPNSC 387

[Close]

BLAST of Lcy08g002740 vs. TAIR 10
Match: AT2G43870.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 524.6 bits (1350), Expect = 6.7e-149
Identity = 249/378 (65.87%), Postives = 299/378 (79.10%), Query Frame = 0


Query: 12  ILFVALLNSSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPATVYVPRGRYY 71
           +LFV    SS   + S NV+SFGAKPDGKTD+T+AF   W  AC S +P T+ VP+GR+ 
Sbjct: 6   VLFVFFFISSC-SAQSYNVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPKGRFL 65

Query: 72  LRSGTFNG-PCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVSGGNLDGKGT 131
           LRS TF+G  CK   +  RIDGTLVAP+D+RVIGN   WI F+H+DG+TV GG LD +G 
Sbjct: 66  LRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLDARGA 125

Query: 132 ALWACKNSTKTCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNIKMKGLKVLAS 191
           +LW CK S K CPSGA+T+ F +S NVVVS LTSLNSQMFH+VINGC N+K++G+KVLA+
Sbjct: 126 SLWDCKKSGKNCPSGATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVKVLAA 185

Query: 192 GNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHGISIGSLAK 251
           GNSPNTDGIHVQ SS+V+I N+KI TGDDC+SIGPGT+ LWIEN+ CGPGHGISIGSL K
Sbjct: 186 GNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGK 245

Query: 252 DLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNY 311
           D  E+GV+NVTVK   F+ T NGVRIK+W +PS+GFA+NI FQH VM+NV+NPI+IDQNY
Sbjct: 246 DSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIIDQNY 305

Query: 312 CPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLEDVKLTYMNQT 371
           CP H  CP Q SG+KISDV + DIHGTSAT+V VK DCS K PC GIRLEDVKLTY N+ 
Sbjct: 306 CPDH-DCPRQVSGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTYQNKP 365

Query: 372 AQATCSHAGGIVAGLVEP 389
           A + C+HAGGI AG  +P
Sbjct: 366 AASACTHAGGIEAGFFQP 381

[Close]

BLAST of Lcy08g002740 vs. TAIR 10
Match: AT2G43890.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 435.3 bits (1118), Expect = 5.3e-122
Identity = 209/389 (53.73%), Postives = 278/389 (71.47%), Query Frame = 0


Query: 3   QLRSTLIPFILFVALLNSSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKPAT 62
           +L + L+ F     L+ SS   S + NVVSFGAKPDG+TDST+AF  AW  AC S    T
Sbjct: 5   KLVAVLLMFFSSFLLMKSSTAAS-NYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVT 64

Query: 63  VYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTVSG 122
           V VPRG + L+   F GPC++   F +I GT+VAPSD+R +GNS  WI+F  V+ +++ G
Sbjct: 65  VTVPRGSFLLKPVEFRGPCRSRITF-QIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIG 124

Query: 123 GNLDGKGTALWACKNSTKTCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNIKM 182
           G LD +G + WAC+ S K+CP GA ++ F+ + +VVVS LTS+NSQ  H+VIN C N+ +
Sbjct: 125 GTLDARGASFWACRKSGKSCPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIV 184

Query: 183 KGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPGHG 242
           + +K++A   SPNTDG+HVQ S+ VT+ +    TGDDCISIGPGT NL++  + CGPGHG
Sbjct: 185 RKVKLVAPDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHG 244

Query: 243 ISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQN 302
           ISIGSL +D  EAGVEN+T+  + FS + NGVRIK W + S GF RN+LFQ+++M NVQN
Sbjct: 245 ISIGSLGRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQN 304

Query: 303 PIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLEDV 362
           PI++DQNYCPS++GCP Q SGVKIS V Y++I GTS TQ A+ FDCS  NPC  IRL D+
Sbjct: 305 PIIVDQNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDI 364

Query: 363 KLTYMNQTAQATCSHAGGIVAGLVEPTSC 392
           KLT+  ++A +TC +  G+ AG+V P  C
Sbjct: 365 KLTFNGRSATSTCKNIKGVKAGVVMPQGC 391

[Close]

BLAST of Lcy08g002740 vs. TAIR 10
Match: AT1G05660.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 433.7 bits (1114), Expect = 1.6e-121
Identity = 206/392 (52.55%), Postives = 276/392 (70.41%), Query Frame = 0


Query: 4   LRSTLIPFILFVALL---NSSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKP 63
           +  ++I F L   LL   + S   S   NVVSFGAKPDG TDST AF  AW  AC S   
Sbjct: 1   MTKSVIRFSLLFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASS 60

Query: 64  ATVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTV 123
           ATV VP+G + L+  TF GPCK+   F ++ GT++AP D+R  GNS  WI+F  V+  ++
Sbjct: 61  ATVVVPKGTFLLKVITFGGPCKSKITF-QVAGTVIAPEDYRTFGNSGFWILFNKVNRFSL 120

Query: 124 SGGNLDGKGTALWACKNSTKTCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNI 183
            GG  D +    W+C+ S + CP G  ++ F+++K+V++S + S+NSQ+ H+ +NGC N+
Sbjct: 121 VGGTFDARANGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNV 180

Query: 184 KMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPG 243
            ++ +K++A GNSPNTDG HVQ S+ VT   S + TGDDC++IGPGT NL I  + CGPG
Sbjct: 181 VVRNVKLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPG 240

Query: 244 HGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNV 303
           HG+SIGSLAK+LKE GVENVTV  + F+ +QNGVRIK+W +PSNGF R + FQ +VM NV
Sbjct: 241 HGVSIGSLAKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNV 300

Query: 304 QNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLE 363
           +NPI+IDQNYCP+H+GCP + SGVKIS VTY++I GTSATQ A+K  CS  +PC GI L+
Sbjct: 301 ENPIIIDQNYCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQ 360

Query: 364 DVKLTYMNQT-AQATCSHAGGIVAGLVEPTSC 392
           D+KLTY   T A + C +A G   G+++PTSC
Sbjct: 361 DIKLTYNKGTPATSFCFNAVGKSLGVIQPTSC 391

[Close]

BLAST of Lcy08g002740 vs. TAIR 10
Match: AT1G05650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 429.5 bits (1103), Expect = 2.9e-120
Identity = 203/392 (51.79%), Postives = 276/392 (70.41%), Query Frame = 0


Query: 4   LRSTLIPFILFVALL---NSSFGDSLSLNVVSFGAKPDGKTDSTQAFQTAWANACGSIKP 63
           +  + I F L   LL   + S   S+  NVVSFGAKPDG TDST AF  AW  ACGS   
Sbjct: 1   MTKSAITFPLIFTLLTFIDVSSSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAAS 60

Query: 64  ATVYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFRVIGNSVAWIMFRHVDGVTV 123
           ATV VP G + L+  TF GPCK+   F ++ GT+VAP D+R  GNS +WI+F  V+  ++
Sbjct: 61  ATVVVPTGTFLLKVITFGGPCKSKITF-QVTGTVVAPEDYRTFGNSGSWILFNKVNRFSL 120

Query: 124 SGGNLDGKGTALWACKNSTKTCPSGASTLEFSNSKNVVVSALTSLNSQMFHIVINGCQNI 183
            GG  D +G+  W+C+ S + CP G  ++ F+++K+V++S + S+NSQ+ H+ +NGC N+
Sbjct: 121 VGGTFDARGSGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNV 180

Query: 184 KMKGLKVLASGNSPNTDGIHVQLSSNVTILNSKIGTGDDCISIGPGTSNLWIENIVCGPG 243
            ++ ++++A G+SPNTDG  VQ S+ VT+  S + TGDDC++IG GT N  I  + CGPG
Sbjct: 181 AVRNIRLVAPGDSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPG 240

Query: 244 HGISIGSLAKDLKEAGVENVTVKKAFFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNV 303
           HG+SIGSLAK L E GVENVTV  + F+ +QNGVRIK+W +PS GF RN+ FQ+++M NV
Sbjct: 241 HGVSIGSLAKQLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNV 300

Query: 304 QNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQVAVKFDCSPKNPCVGIRLE 363
           QNPI+IDQNYCPS++GCP + SGVKI+ VTY++I GTSATQ A+K  CS  NPC GI L+
Sbjct: 301 QNPIIIDQNYCPSNQGCPTEHSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQ 360

Query: 364 DVKLTYMNQT-AQATCSHAGGIVAGLVEPTSC 392
           D+KLTY   T A + C +A G   G+++PTSC
Sbjct: 361 DIKLTYNKGTPATSLCFNAVGKNLGVIQPTSC 391

The following BLAST results are available for this feature:

BLAST of Lcy08g002740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P48979	9.7e-161	68.88	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
O22818	2.5e-116	56.68	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
Q6H9K0	8.4e-80	44.54	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
Q8RY29	2.7e-78	44.13	Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2	[more]
P49063	7.9e-78	42.05	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ...	[more]

BLAST of Lcy08g002740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DTW1	1.4e-191	83.72	Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold876G00...	[more]
A0A5D3C3E8	2.1e-190	82.70	Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00...	[more]
A0A5A7VKX0	2.7e-190	82.44	Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00...	[more]
A0A5A7TUJ2	7.9e-190	82.95	Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00...	[more]
A0A6J1EJA0	3.9e-189	82.86	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434653 PE=3 SV=1	[more]

BLAST of Lcy08g002740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888714.1	4.6e-192	86.13	polygalacturonase-like [Benincasa hispida]	[more]
TYK26944.1	3.0e-191	83.72	polygalacturonase [Cucumis melo var. makuwa]	[more]
TYK06443.1	4.3e-190	82.70	polygalacturonase [Cucumis melo var. makuwa]	[more]
KAA0068064.1	5.6e-190	82.44	polygalacturonase [Cucumis melo var. makuwa]	[more]
KAA0046810.1	1.6e-189	82.95	polygalacturonase [Cucumis melo var. makuwa]	[more]

BLAST of Lcy08g002740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59850.1	3.5e-150	63.50	Pectin lyase-like superfamily protein	[more]
AT2G43870.1	6.7e-149	65.87	Pectin lyase-like superfamily protein	[more]
AT2G43890.1	5.3e-122	53.73	Pectin lyase-like superfamily protein	[more]
AT1G05660.1	1.6e-121	52.55	Pectin lyase-like superfamily protein	[more]
AT1G05650.1	2.9e-120	51.79	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 287..308 e-value: 3900.0 score: 3.0 coord: 257..278 e-value: 7100.0 score: 1.1 coord: 177..203 e-value: 1500.0 score: 6.1 coord: 204..225 e-value: 540.0 score: 9.1 coord: 227..247 e-value: 1100.0 score: 6.8 coord: 321..361 e-value: 2800.0 score: 4.0
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 20..390 e-value: 3.2E-119 score: 400.6
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 55..374 e-value: 1.5E-85 score: 287.1
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 234..247
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 8..391
None	No IPR available	PANTHER	PTHR31375:SF219	PUTATIVE-RELATED	coord: 8..391
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 15..392

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g002740.1	Lcy08g002740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004650	polygalacturonase activity