Lcy08g002710 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g002710
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPAP_fibrillin domain-containing protein
LocationChr08: 3938551 .. 3950303 (-)
RNA-Seq ExpressionLcy08g002710
SyntenyLcy08g002710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGCTCTGCAACACAAATGGCAACCGTCTCTCTTTTGCTGCGCTCTTCAGCACTCAAAAAGAGAAGAAATGACAATGGCCTTATCCTCATCTACGGTTACTCCTACCCTCAAACTGTCGCCCTCTTCAACATCCCAACCGCCCAGGCTTCTCCTTCGCATCCCCTCCAACCCCATTTCCACCGCTTTATCTTCAAACAACAAGCTCCTCACTGCTTCACCTTCTGACAAGTGGAGGCTCAGAATCTCTTTCTTTCCTGCCTTTTTGAAAAAAGGGAAAGATGTTGGTGCTCTTAAAGAGGAGCTTCTTCAAGCAATTGCGCCCCTTGATCGAGGAGCTGAGGCCACTCCTGAAGATCAGGAAATGGTTGATCAGGTTGGTTATCCAAACTTGCATAATTGCATTTGAATTTTGACTGTGCTGTAGTTTACTTTGTTGAGAATTGCAATTGGAAGAGCCCCCGAGAGGTGGTCACACGCGGTCACCTACCTAGAGGTCACGTGTTCGAATCTTGGAGTGAGCTTAATGAGAAATTTTTGATGTTTCAGAGCATTAGGACGGATAAAAACTTCAAGAAGAAAGAATTGTAATTTGAAGGAGAAATTATTTGAGAAAGGCTGATACAATGTGATTGGCGTTTTATATCAATAACCATGGATGTTGGCAAAGGTTTAGGGAGGGATAGCCAAAACGAGACAGTCATATTGAATAATTTTCTAATTTCTAACTTGAAGGGTATATATGACGGTTTTTATGTGTATCGCTAATTCGTTGGTAGCATTTGCATCTTTTGTTGGATGGTCAGAACTGCATATCTTAAGGAAATGGGATTCCCTGGCTTACTGTTGTTGGGTTTATCATGAGCCAGAGAAAATGAGGTGATAGGAAGGAATGTCTTTGTCTTAGCTATGGAGGTTTAGTTTGGTCATTGTTGGGAATTGGGGAGTGTGACCAAAATCTCAAATTGGCTAGATAAGGGGAGAATCATGGGTATACAAGAGAGGACAACTATCTTCATTGGTATGAGGCCTTTTGGGTGGATCCAAAAGCAAAGCCATGAGAGTTTATGTACAAAGTGGACAATATCATACCATTGTGGATATATGTAGATGGTCCTTTGTCCCTAAGAAGTGGTATTAGAGATAGACCCTGATGTAGCCATGCCGGTAGAATCCTTAGGTGTTGAACGAAGAATTTGTGAGCCTTGAAGAAATAGTCCTGGGGAGATTTGTGGTTAGGCTCTATTGGGTAGACAATATACTTCGAATAAGTGGAGTTGGCCTGGATAAGAGTATACTCCTTGGTGGAGAGCTGGACGGAGAGATGATTATTTGAGGGGAGGCTTGTCGGTGGTACTTTGTTCGAGGGGAGGATTGTTGGGAATTGGGGAGTGCCAACCAAAGTCCTACATTGGCTAGATAAGGGGAGGATCATTGGGTATATAAGGGAAGACAACTATCTCCATTGGTATGAGGCCTTTTGGGTGGATCCAAAAGCAAAGCTATGAGGGTTTATGCCCAAAGTGGACAATATCATACCTGTGGAGATATGTGATTGGTCTTTTGTCCCTAACAGTCATTTGTCTCTACGAGCATAACATACTCTATTGATTCAAGAAGATCTATTTGGATGGTTGAGCGGGCATGCTGCTATACTGAGTTGAATTTGCTGAGATGGTGCCTTCTAATTGGGCAAGATACAAAAGATAGGATTTCTTATTTGGATGACATCATTTCTGTGTACGTTGAAGGTAACTTAACCATCAAAGTACCCTGTGGATGGAAGACTTTTTTTCCTTAATGGGTCACTTTGGCTAAGATGTTGTAGACTATAATAGTAAGGGTAATTAGCCTAAGGTTCCAACTTTGAAGGCCTTTTCTTTTTTGAAATGAGGCTAATACAAGATCTTCTAGAACGTAGTAATATGAGAGGATATGCTATTGGTGAGGTATGTGGCATTGAGATCAACTTTGTGTCAGCGAATTTTTGGAGTATTATTAGTGAACATGATAAGTCTTGGTACTTCCATAAGATTTCTAGTTTGCCTTTAGCTATCTCATTTTGTTAGGTTGTAACCTCCTTTTATCTAGAAATCTTTGAACATCACATTGAAATGGATTATCAATTCGATTGAAAAATTTTTGAGGAAGATGCCTTCGTTGGTAGGTCCGTTTTGTTGCATTTTATGTCGGAGGGCGGAGGAAGATTTGGACCATATTTTGTGGACTTGTGATTTTGCCCAATCGGTGTGGGACTTGTTCTTCGATGCATTCGAGATAAAGCTAGGAGTTTCAGAGACTATAAGGAGAAGATCTAGGAGTTCCTCCTTCATCCACCATTTCGTGAGAAGGGAAGGTTTTCATGGCTAGCTAGGGTAGGCACATTACTGTGGGGCCTATGGTGAGAGAGAAATAATAGAGTGTTTTGTGGCCTTGATAGGGACCCGTATGATGTTTAGGCCCTTACTAGGTTCTATGTTTCTCTATAGGCCTCAGTGTCCAAGTCTTTTTGTAATTATGTTCTAGGCACTATCATTCCTGATCGACGATCCTTCCTTTAAAGGAGGTCTCTTTTGTGAGCTTGTTTTTTTGGATGTCCTTGTATTCTTTCATTTTTTTCTCCATGAAAGTTGGTTTATTTATAAAAAGGAAAATATTGGGGATGACTTTTGGTGTCAAGTTGGCTATAAATCTGTTTTACATACATTTGAATTATTCTCTTTTTAAGAGAAGCAGAATTTTCATTGATGAAATGAAAAATTACCAAAGAGTTCCAACACATACAAAAAAAAAAGCTGAAACATAATTGAATTACAAGACTCTGAACCCAAACTCAAGAGGGAAAACTTAAAAAAGCATAAATCATCTATCAACTCTAAACAAAAGGCCGCAAGATCTTCATGACTGCAGCTTCATATCTTTAGGTCTTCAGAAGGAGCGTTCTGATTGCAAATTGATAGCATTATAATGTTTCTTATCCCAGAAGGAGCTTTCTGTTTTGCAAATTGATGAAGCATTTAGTTCATGTAATGTTTCTTATCCCAGAAGGGCCAAAGCATCATTGTGAAATATTCGATCTTGAAGCATCATTGTGAAATATTCGATCTTGAAGCATCATTGTGAAACATTAGGTCTCTAAACATATTTGTGAAGCATTTAGTTCATATGTATATATACAAGCTTTAAGCTATAGCTACTATCCATTACATTGTTACCCAATTAAATAATATCAGTTCGAAAATTTAAATTATAATTGTATATTTTTATTCACTTTCGATAAATCACAACGTAGTTACTCTTATAATAAATCTTTATGTGGTCAATTCTATATTTATATTCACTCTTCATAAATCATAACATAGTTAATTCTTGTTCTCATTTTGGTGTCTTACGAACAGTTATCACGTAACCTTGAAGCAGCCAACCCCACAAAGGAACCACTCAATTCTGATTTACTAAATGGGAAATGGGAGCTCATATATACTACTTCAAGATCAATTCTGCAAACTGAGGTAGCTGGATACTTCATTATGACATGTTTCCTCACAACTATTCTACTCTAGCATACATGCACAATACACACATTTATGCTGTTTTTCTAACTCTCTAGTTGAATTAAACTTTTTGATTGATATTTAGATTTTTTATCAGCTATTAATTGATAAGATGCCATCTCTAATTAAGACAATTGTGATATCATAAGTAAGGTCATGAAAAGATACTAGCCTAGAACAAGCAAAGGAGCTTCAAAAAATAATTGCGAAAAAAGGCTCAAGTTATTAAGAATAAACAACAAAGGAGAAGCACAAAACAGACTTGGTAGAAGAATCCCGAGGGAAAGTATTGAAGCGTTCTTATCAACTATCAAGATTTCACTGTTCCCTAAAAACCCTCTTGTCTCTTGTTACTTTCTAACCAAATTGACTGCAGAATGAAAGTAACTAAGTTGCAAAATGAGTCTCTATTTATAAATGGTAGATTCAAGAGAATCTTCTCCATCAGAGGTAGAAGCACTGGAAGCTTCTGTCAATGAGGCTTTCACTTAACTTTCTCTCTATCTCTCTCTCGGTTCTTTCATATTCCTTGGTGAAAGTGGAGTTTAATCTTAGTAGAGTTTTCACAAAATTGGATTTTCGAAGTTGTAGTGTTAAAAATAAGTTATTCCCTTTTAAGTTTGAAAGAAAAAGTGAAGGGGAGATGAAGAAAAATAATTGGTCGGTGAAGAATAAATTTGAGTTTGGTCATGTAGTCAGATCGATTGGAATTTGGAACATACATAGTTGTAACAAGATTTCATTTTCATGATGATTGGTTTTCCATTTTAATCCATGAAAATTGCACGATCAAAACTTTTCTGGTGGATAAAATCTTGCTTAAGGGGGTTGTCAAATAGGAGTTTGAGGAATTTGTAAGCAGGATGGTCAGCATATAGTGGGTTTTTTTTTTTTTTTAAGTTTGAGAGATGGAATACTAAAAAAACCATGGTAGAGTTTTGGGTTCGCCTTATCACTTTTGAGAGGAATAGCTTTTGGAGCTGCCTTTAGTTTTAATTAGTCATTGTTTAAATAGAAAATTGTTATTGAGTAACATTACAAATACAATGAATCTAGTAGAGCATAACTCAACTGACATAAAGTGTGTACTCTTGACGAAAAGGATAGAGGTTCGAATACAAATGCAATTAATCTATATTTTCTGTTAATAATTTTTCTTCTAATAAAATGTAATTTAATTGTGAAATATTACAAACTTTAATTTAATATCTCAGTTATTTAATGTTGCTTAGATGTTATTAATTAAGATCAGCTAGATTGTTAAATTATAATTCATTAATATAAAATATTATATCAATAAATCTTAATAATATTTTGTATCAATAATTGTTATCCTAATGAAAAAAATATATTAATCTTTTTTAGTTGAAGTAATTTATTTGTTAATGACAAATAAATTATTAAAATATAATTTATTATTATTAAAACCATAACAATAAAATTTAATAATATTTTATTTTAATAATCAGAGTTCCAATAAAAAATTATTAATTATTTTCAGTTATGCAGTTTTATTTTAATTAGTTATTATTTAATATCATATTAATTGTTAAAATAAAAAAATATTACTATAAAATAAAATAATACGACAAATTAAAATGTATTATTGGTTGACCAGTCGAGAAGCGGCAAAGGTCGTCAGTCTCCTTTCCTTTTTGGCTGACCAGTCGATTCGTCATGGGAGAAGGGACTTACGGTTATGGACCTCGGAGCCTTCTAATGGCTTCTCGTGTGCCTCTTTTTTCCATTCTCTCTCTATGTCTCTCCCTCCTCCAGGGGCCTCCATTTTCTCCTTTTTTTGGAATGTCAAAATCCCCAAGAAAGTGAAGTTCTTTGCTTGGGAAGTTTTACATGGTTGGGCGAATACTCGGGATCAATCCAAAGGTTCTCCTCTTTCGTGTTGCGGCCGCAGTGGTGTGTCCTCTGTAGGAGTCAAGAGGAGGATCTAGATCATTTGCTTTGGGATTGTCCGTTTGTTTGTTCTATTTGGAGTTAGCTCTTTAGGGTGTTTGAGGTTGCTTCGGCTCGTAACATTTTGATTGCTCCTCTATGTTTGAGGAAATCCTTTGGCATCCCCCTTTTCATCACAAAGAGAGAGTTCTTTGGCAAGCGTGCTTCTTTGCTATTTTGTGGGGTATATGGCTTGAGAGGAATAGTAGAATTTTTAGAGGGGTGGAGAAATCCACGAATGAGCTTTGGGAGACGATTAGATTTAACTTGTCTTTGTAGGCGTCTATTTCTAAGCTTTTTTTGTAATTATCAGCTTGGTCTTATTAATTTGGACTGGGACTCGTTCCTGTAGTCTAGACGGGTGTTTTTGGCGGGCTTGTTTTTTGTATGTCCTCTTGTATTCTTTCATTTTTTCTCAATGAAAGCATGATTTCTTATAAAAAAAATAATTTATTATTTGTTATTGTTCTTTTAATTAGCTAGAAATATGAATGGGGTATTATAGTAATTATCATATGTTGTTTCCTGTTAAAAAAAAAAAGTAATTATCATATGTGTTTGGTTCCTATTTTGATTCCAGACAATTTAGAGTAAACATTACCAATAGGTTTTTGATTCTGATTTCAGACCATTTTTAGTAAACAACATCAAAGGAATAAATTCCAATTCTCATTAATTTCATTTCAGTTGATTTTTATTCCAATTCTTGGTAAGTAAACAGGCCCCAACAACATTGAAATAAGAGGAAAAATTTATACGTATAAGATTTTTCATTGGGCACTATGTTAAATTATCATTTGTTTAAAATTTATGCTATGGAGTTAGGGTGGACTTAATCATTTAATTAATTCTTAACAGTTGTATTTTGATAGAGGCCCAAGCTGTTAAGATCAAGAACAAATTATCAAGGAATCAATGTAGATACACTCAGAGCTCAAAATATGGAATCTTGGCCATTCTTCAACCAGGTACAAGTTACCGTTCCCTTCATTGTATTTGATGTTACACTTTCTATCTTTCTTTTACTCCCTAATTATAATTGTATGTCAATGGATCATGTTTGTACATAGTGTAATTTCTGTAAATTGCATTTATTAGTCTTTATCTTTGCTCTCCAAATGCCATATCAAATGAAGTTAGTTTGGAACCAAGATACGAACTGGAATAATATCATACATAGATGCAAGATGGATCATTTATCTTATATAATAGTTATCCACTTACTCAGAAAAATGGAAATGCATTGAAATGAGGTTAATGTTTCAATTAAGTACCAAGTTTTGATAAAAAATTTAATATTTAGTCTGTCAATACATGTGCAAAGTTTACTATAGTAGGCTAGTAGCTAAGCTTTATCCGTACAAGTTACTAATAACAATAGGGACCAAGCCATGAAGGTTTAACCATTCTAGAAAATTCCTTTTTTTTTTTTTTTTTTAGTTCAACAACATTCTAGAGAATTACCACCAAACTTGTGACTATTAAGGGCTCAGCTAGCTGCTAACTGATTGACCCAGAGAATGAAAGTTAAAATTGGAAGACATCTAAAATTTGGATCCCAAGCCTAAATGTGAACGGATGAAGAGGAAGAGATAAGCAGCTGTCTTCTAATCCCTTCTACCAAGGCAACATCTGTTTGGATTTAGTTAGAAGGTGAGATTTCTTTTCTGGGTTTTATCCTGTGTATTTAAATCCCCAAGCCTTAGCTACCAAAGGAAGAATTTATACGTTTTCAGGAAAAGTTAAATTCTAAAGTCTCTTACAAAAAGGATGAAATGACTTTCTGCCTTCATAAGATGGGAGAAAAGAGACGTGACCATATAAGAGTTTAACTTGTCTAGAACCCACTTTTTAGTGTTATTTTCAACTAAAAGAAACAAGTCTTCACAATGATTAAAAAAAAAATCTAATCATCTCCTTCTCTATTTCACAAATTATGGTGAAGAGAGATGTTCCAATCTTTGCAGATGGAGTCATAGGCCAACAGGAAATAATTCTGCCAGATATCTTTCATCTTCCCAATGGTGAAGCTAAAGAAGAGTGTTAGAACCATCTCTAATAACTTGCTCTGTATTGTCATTGTCATAAAAGAGGAGGCTAAAGTAACACTTTTGACCAAGGACATCTAGGACTAGATGATTTTGAGGTGTTAGGTGCAGGGTTCTTGATCCTATTGTCATGTTTTGATGTTTCTGGAAGGGGAGAAAAAAGGAACTTTTGAGCGTCCAACTTACACCGGCATGGTGTTTGTCAAGATGACACCAATGGTGAAGTTTCTCCATGGTTTTTGTTTGTTTACGCAAAAAAAAAAAACATTCTTAATAATCTTGATATAGTTATTCAAAGGCCGATCAAGTCTAACTGGAGCTCTAAAAATATTATAGGCCCTCTTCTATTGATGCTTGGAATCCTCAGGTATCATTCTTCTTCTTTGGAATGAGCTTGCTATTTAGGGTTTGGAGGAGGTAGAAGATATAAGATGAAAGTAGTTGAGAGATTGTATGACTCTTGGTTACAATGTTCAATAGGCAGTCTTTTTAATATTTCAAGTTTCTATACATGTTTGATCGTTGAGATTGAAGAAGCATTGCAAAAAGAATCAAACAATATATCAAAGAAGTGCTTATCTATTTTTCTCAATTAGATGATGAGTTCTTGTTAGGGAATTGGTAACTATAGCTCCAACTCGTGTGTTCAAGTTCTTGTCCTTTTTGTAGGTCACAGCAAACTTGAAGCCTTTAAACACAAGGAAAGTAGCTGTTCAATTTGACACATTCAAAATTCTTGGTCTGGTAAGTCTTCTGGTTTCTTTGATTATCTTTATTGGGAATTCCATAATATAGATCAAACTATATTTTGTGCTTGCATTTGTCAAACTCTGGAATTAAAAATAATAGAAATGAGATGTTACATTAGTGGATAGTGTGGATGTCTTTTATAGGACTTGTGAATGAAGCTTTTTTTACAGGACCTTACATAGAAAGAATAGATCTCCTTTGGCTTACTTTTGAACCATAGGAAAGCTGCTTCATTGTGACCCTTGAATTTTAAACCTCTTAACTTTCAAAATAAGTTCAACGTACAATGATTTTTCTTCCATTAAAATCTTTATATTAATGGATCGAAGCATTTTAAATATGAATAGTTAGGTTTCCCGTTGGCAATGGGAAACAAAAAAAACTGAGGTTCCATCTAAGAGTAAAACTAGTTGGTTCTTGGTGTAAACCAAAGACACTGAATTTTATTGAGAGTGAACTAGCCTTTCAATGATAACAAAGGCTGCTATTTATACAAATGTAAAGGCCAGTAAGCTAACGGCCAAAATCAAGAAAGGCTAACCGATCTTGTAAAGCCAAAAAATAAAAAATAAAACTCTAATCTGGCTTGGCTAAAACAGAACAGAAAACCAAAAGAACAAATATAAAGAACCAAGGTTAATTACTGATAGAGCCTACTTCAGTTATGCTTGTCAGGTAACTCGATTTTGTATTTTCTCCAACCGGCATTGAGTTGGATAAGCTTATGAATGAATTTGTTTTGCTTCCTGAACAAGTTTGGAGTTTCTGTTGCTGGTATGCTTTAGGAATTGCTCTGTTCTTTTATCATTGGTATTTCGATATTTTCATTGATTATCCAAGAGGGTGTTTTAACTGGGAAGGGTGGTGGGGGTTCGGAAAAACACTATTAGCAAAAAGTATGTAAGAATTAGTGCCTAGAAATGCAAAATATTTGGAAAAAATTAACTATGTTATAATTGGGAGAAACACAATTATCAAAAAGAGTAATATTGGGGCTAGTGCCCAAAATTGCTTTTGATTATGCCAGAAAAATTTTTAAAAAGTACTTTTACTTACCTTCTCAAAATTCATCCCAAGGCATTAGAGTTTAGCAAATGCAAGTTAATTATTTTGCACCATGAACTACTAAGAAGAAAAAAATAGACTAAAAACTTATGCAGATAGTTCTCAAAAATCTTAGTCATCCCAAGGCATTAGAGTTTAGCAAATGCAAGTTAATTATTTTGCACCATGAACTACTAAGAAGAAAAAAATAGACTAAAAACTTATGCAGATAGTTCTCAAAAATCTTATAATGGATCCATAAATGAAACTTATGGAATTCTTGAAAATAATATCTAGATTTTCAAACTCAGATATTCTATAAATTGATGTGAAGACTGCTTTTATAAATTAAATTATCAAATCATTTACTCATTTCACAGAAACTAAGCTAAAGACTATAAAAGACAAGATTTCTGTATGTAGTCATACCAATCTCCTCAGTACCTGGTGGCCGAACGGTATCATATTGGCTGAGCCCCATCATAGACCATGCCACTAAGGTCTCACAATGTATCTCTCACCAGTTCTAGTTTCATTGATGTAAGTTTCTTTTTTTCATGTCTTGAACAACAGATACCGGTGAAAGCACCAGGAAGAGCCCGTGGTGAACTGGAAATCACATTTTTGGATGAAGAGCTACGGTAAGTTATTGTGCCAAAATAGGCTTTTTTTATATTTAGTATTGTGAGATACTAATTTTCTAAACCAGACACGACGTTTCTTATCATTTTCTAGTTTTGTTTTGGTTGTGGGAAATCTGCTTGATTTATGGATAACAAGCATCTAATGCTCAGAGTGAAAGTCCATGGTCAGATTAGATGGCATCGATATCAATATCGAATAAGGAAACCTATTAACATATGAATTGTCAACTTTTAGTGATCATTTGATGTAAATGAACTTGAAATAAAAGTTAGTTCAAGAATCAAATTTACAAAAGTATTAGTTTAGGAGTTTGTGTCTAAAGGTAGTATGGTAGGCCTTTTCTTTACCATGTTGAATTCAGCATTTCTAATTGCTTTCTATCCTCAGTTAGAATTATTTACAAATGTTACCTCTTTTGTAAGAGGTTTTTGAGTAACTTTTTAAAAAATGTTGTGAGAAGGGAGAGCTTCTTGTTAAATCTATCACTATAACCCAAAAGCCTAAGCCAATAGGTAAATTTAATCTTATATCAATACTTTAACACTTTCACTCACTTGTGGACTTAGAATTTTGCACAAGGCTTAACCAATGATTATCATTATTAATTGGTAAGGAAATGACATCATAGGTATTTAACCACAAGACCTCTTACTCCGATACTATGTTAAATCACCAATGAAAACTCAAAAGCTTAAGTTGATGAGTCATGGTAAATCTAATCTTTTATAAATACATTCACACTTCCTTCCACTTGCAGGCTTGAAAATTTACACAAGACTCAACAAATGATTATCAATATTAATTGGAAAAGAAATTACCGTACAAAATTTTGAGAGAATAAAAATGTTATATTGTTTTCAAATAGTTACAACTTAGATCTTGCTAAGGTTGCTAAGGTGTATGTGATGGTTAACAGACAATCCAATCAGTAACTTCTGTTTTGTAACAGTTGATTGACAAAAGACCTTAAATCAAACAGATATTTAGTTAAAAAGGCTTACATCGTCATAAAAAGTAGTAAATGGATGAAAACAGGAGTTGAAACATCAACATACAACCTCCTGGTGGATAACATTACACAAAAAGTTCTTTTGTAACTATAGCATGCTAATGATTATTAACGATTGACTGACTCTTTTTGAGATAGATTTTGGGAGGAGGTGATCTCCACCCCGACCCCTAGGTTGTTGCTTATCTCTTTTGTTGGAATATATTCTCTCTTGATGTTTCTTATAAAAAAAATTCAACATATTCATTGTTAATATGCAGAATAATGGAGTTTTCTCACTATCCTTGTATGTTATACAAATAATAACTATGCTTCAGAGGTTTTGAATTTTTTGAATATGGTTTCTAATGAATATGTTTTTATTGGTTCACTTTTAATTCACTGCCACATTTGATTGACATTGCTTTTATGCATTCATTCATCACTGGGGTGTTATTGAACTGTTGTATCATTGAATCTTGACAGAATATCCAGAGGTGACAAGGGGAACCTCTTTATCTTGAAGATGATCGATCCGTCTTATCGAGTACCCGTGTAACGCTAATCTCTTTACTTGTTATATCCACCTAAAGCCTGAAGAAACCACAAAACCAGAGAGATTATATTATCTTGTAAGTTGATTCTCATGATATCTTGACACAACTTGGGGCAATCTCCTGTATATTTTATCTTGTACCAAATTATTCAAAAAGAATCTAAATCTATCAATAGTGTAATCTAGAAACAAATGGTTCTATTGTTCCCTTATTTGTGAG

mRNA sequence

CTGCTCTGCAACACAAATGGCAACCGTCTCTCTTTTGCTGCGCTCTTCAGCACTCAAAAAGAGAAGAAATGACAATGGCCTTATCCTCATCTACGGTTACTCCTACCCTCAAACTGTCGCCCTCTTCAACATCCCAACCGCCCAGGCTTCTCCTTCGCATCCCCTCCAACCCCATTTCCACCGCTTTATCTTCAAACAACAAGCTCCTCACTGCTTCACCTTCTGACAAGTGGAGGCTCAGAATCTCTTTCTTTCCTGCCTTTTTGAAAAAAGGGAAAGATGTTGGTGCTCTTAAAGAGGAGCTTCTTCAAGCAATTGCGCCCCTTGATCGAGGAGCTGAGGCCACTCCTGAAGATCAGGAAATGGTTGATCAGTTATCACGTAACCTTGAAGCAGCCAACCCCACAAAGGAACCACTCAATTCTGATTTACTAAATGGGAAATGGGAGCTCATATATACTACTTCAAGATCAATTCTGCAAACTGAGAGGCCCAAGCTGTTAAGATCAAGAACAAATTATCAAGGAATCAATGTAGATACACTCAGAGCTCAAAATATGGAATCTTGGCCATTCTTCAACCAGGTCACAGCAAACTTGAAGCCTTTAAACACAAGGAAAGTAGCTGTTCAATTTGACACATTCAAAATTCTTGGTCTGATACCGGTGAAAGCACCAGGAAGAGCCCGTGGTGAACTGGAAATCACATTTTTGGATGAAGAGCTACGAATATCCAGAGGTGACAAGGGGAACCTCTTTATCTTGAAGATGATCGATCCGTCTTATCGAGTACCCGTGTAACGCTAATCTCTTTACTTGTTATATCCACCTAAAGCCTGAAGAAACCACAAAACCAGAGAGATTATATTATCTTGTAAGTTGATTCTCATGATATCTTGACACAACTTGGGGCAATCTCCTGTATATTTTATCTTGTACCAAATTATTCAAAAAGAATCTAAATCTATCAATAGTGTAATCTAGAAACAAATGGTTCTATTGTTCCCTTATTTGTGAG

Coding sequence (CDS)

ATGACAATGGCCTTATCCTCATCTACGGTTACTCCTACCCTCAAACTGTCGCCCTCTTCAACATCCCAACCGCCCAGGCTTCTCCTTCGCATCCCCTCCAACCCCATTTCCACCGCTTTATCTTCAAACAACAAGCTCCTCACTGCTTCACCTTCTGACAAGTGGAGGCTCAGAATCTCTTTCTTTCCTGCCTTTTTGAAAAAAGGGAAAGATGTTGGTGCTCTTAAAGAGGAGCTTCTTCAAGCAATTGCGCCCCTTGATCGAGGAGCTGAGGCCACTCCTGAAGATCAGGAAATGGTTGATCAGTTATCACGTAACCTTGAAGCAGCCAACCCCACAAAGGAACCACTCAATTCTGATTTACTAAATGGGAAATGGGAGCTCATATATACTACTTCAAGATCAATTCTGCAAACTGAGAGGCCCAAGCTGTTAAGATCAAGAACAAATTATCAAGGAATCAATGTAGATACACTCAGAGCTCAAAATATGGAATCTTGGCCATTCTTCAACCAGGTCACAGCAAACTTGAAGCCTTTAAACACAAGGAAAGTAGCTGTTCAATTTGACACATTCAAAATTCTTGGTCTGATACCGGTGAAAGCACCAGGAAGAGCCCGTGGTGAACTGGAAATCACATTTTTGGATGAAGAGCTACGAATATCCAGAGGTGACAAGGGGAACCTCTTTATCTTGAAGATGATCGATCCGTCTTATCGAGTACCCGTGTAA

Protein sequence

MTMALSSSTVTPTLKLSPSSTSQPPRLLLRIPSNPISTALSSNNKLLTASPSDKWRLRISFFPAFLKKGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLNSDLLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV
Homology
BLAST of Lcy08g002710 vs. ExPASy Swiss-Prot
Match: Q9LU85 (Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP4 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.6e-68
Identity = 144/249 (57.83%), Postives = 181/249 (72.69%), Query Frame = 0

Query: 3   MALSSSTVTPTLKLSPSSTSQPPRLLLRIPSN-PISTALSSNNKLLTASPSDKWRLRI-- 62
           MAL S   T  L +SP++       L++  S   + T L S  K       D+ RLR+  
Sbjct: 1   MALPSCLKTGAL-MSPATGFNFSGSLMKSDSGFAVPTKLQSTRK------GDRERLRVQA 60

Query: 63  --SFFPAFLK---KGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTK 122
             SF PAFL    + +    LK+ELL+AI PL+RGA A+P+DQ  +DQL+R +EA NPTK
Sbjct: 61  IFSFPPAFLTRNGRAEKQKQLKQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNPTK 120

Query: 123 EPLNSDLLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVT 182
           EPL SDL+NGKWELIYTTS SILQ ++P+ LRS TNYQ INVDTL+ QNME+WPF+N VT
Sbjct: 121 EPLKSDLVNGKWELIYTTSASILQAKKPRFLRSITNYQSINVDTLKVQNMETWPFYNSVT 180

Query: 183 ANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKM 242
            ++KPLN++KVAV+   FKILG IP+KAP  ARGELEIT++DEELR+SRGDKGNLFILKM
Sbjct: 181 GDIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELRLSRGDKGNLFILKM 240

Query: 243 IDPSYRVPV 244
            DP+YR+P+
Sbjct: 241 FDPTYRIPL 242

BLAST of Lcy08g002710 vs. ExPASy Swiss-Prot
Match: Q6DBN2 (Probable plastid-lipid-associated protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP5 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.4e-63
Identity = 125/215 (58.14%), Postives = 159/215 (73.95%), Query Frame = 0

Query: 33  SNPISTALSSNNKLLTASPSDKWRLRIS---FFPAFLKKGKDVGALKEELLQAIAPLDRG 92
           ++P  +  +   KLL+    D+ RLRI     FP      +    LK EL++AI PL+RG
Sbjct: 20  NHPSDSGFAVPTKLLSIRKGDRERLRIQAVFSFPPRNGGAEKRKQLKHELVEAIEPLERG 79

Query: 93  AEATPEDQEMVDQLSRNLEAANPTKEPLNSDLLNGKWELIYTTSRSILQTERPKLLRSRT 152
           A A+P+DQ ++DQL+R +EA NPTKEPL SDL+NGKWELIYTTS +ILQ ++P+ LRS T
Sbjct: 80  ATASPDDQLLIDQLARKVEAVNPTKEPLKSDLINGKWELIYTTSAAILQAKKPRFLRSLT 139

Query: 153 NYQGINVDTLRAQNMESWPFFNQVTANLKPLNTRKVAVQFDTFKILGLIPVKAP-GRARG 212
           NYQ IN+DTL+ Q ME+WPF+N VT +L PLN++ VAV+   FKILG IPVKAP G ARG
Sbjct: 140 NYQCINMDTLKVQRMETWPFYNSVTGDLTPLNSKTVAVKLQVFKILGFIPVKAPDGTARG 199

Query: 213 ELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV 244
           ELEIT++DEELRISRG    LFILKM DP+YR+P+
Sbjct: 200 ELEITYVDEELRISRGKGNLLFILKMFDPTYRIPL 234

BLAST of Lcy08g002710 vs. ExPASy Swiss-Prot
Match: Q0JD85 (Fibrillin protein 5 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=FBN5 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.4e-10
Identity = 64/196 (32.65%), Postives = 95/196 (48.47%), Query Frame = 0

Query: 72  VGALKEELLQAIAPLDRGA-EATPEDQEMVDQLSRNLEAANPTKEPLN--SDLLNGKWEL 131
           +G  K+ L  A+  ++RG    T E +  +  L   LE+ NPT EP +   D ++G W L
Sbjct: 85  LGDAKDALYAALEGMNRGIFGMTSEKRSEIHALVELLESKNPTPEPTDKLQDKVDGCWRL 144

Query: 132 IYTTSRSILQTERPKL-LRSRTN----YQGINVDTLRAQNMESWP------FFNQVT--A 191
           +Y+T  SIL  +R KL LR   +    +Q I+V   +A N+  +          Q+T  A
Sbjct: 145 VYSTI-SILGKKRTKLGLRDFISLGDFFQMIDVKEEKAVNVIKFSARALKILSGQLTIEA 204

Query: 192 NLKPLNTRKVAVQFDTFKILG-------------LIPVKAPGRARGELEITFLDEELRIS 239
           + K     KV +  D+  I               L+ +  P    G LEIT++DE LRI 
Sbjct: 205 SYKITTKTKVDITLDSSTITPDQLMNIFQKNYDMLLAIFNP---EGWLEITYVDESLRIG 264

BLAST of Lcy08g002710 vs. ExPASy Swiss-Prot
Match: Q5M755 (Fibrillin-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FBN5 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08
Identity = 56/198 (28.28%), Postives = 93/198 (46.97%), Query Frame = 0

Query: 72  VGALKEELLQAIAPLDRGAEATPEDQEM-VDQLSRNLEAANPTKEPLNS-DLLNGKWELI 131
           V  +KEEL +A+  ++RG      D++  ++ L + LE  NPT EP    D + G W+LI
Sbjct: 83  VSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLI 142

Query: 132 YTTSRSILQTERPK-----------LLRSRTNYQGINVDTL----RAQNMESWPFFNQVT 191
           Y+T  ++L ++R K           LL+     QG  V  L    R  N+    F  ++ 
Sbjct: 143 YSTI-TVLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGEF--RIV 202

Query: 192 ANLKPLNTRKVAVQFDTFKI----------------LGLIPVKAPGRARGELEITFLDEE 237
           A+ K  +   V + +++  I                LG+          G  EI++LDE+
Sbjct: 203 ASFKISSKSSVEITYESSTIKPDQLMNIFRKNMDLLLGIF------NPEGLFEISYLDED 262

BLAST of Lcy08g002710 vs. ExPASy Swiss-Prot
Match: Q6K439 (Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAP2 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.1e-08
Identity = 62/228 (27.19%), Postives = 91/228 (39.91%), Query Frame = 0

Query: 63  PAFLKKGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLNS-DL 122
           PA +    +V  LK +L +A+   +RG  A+ E +  V +L   LEA NPT  P  +  L
Sbjct: 83  PADVPVTSEVAELKAKLKEALYGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTL 142

Query: 123 LNGKWELIYTTSRSIL----QTERPKLLRSRTNYQGINVDTLRAQN--MESWPFFN---Q 182
           LNGKW L YT+   +         P+L++     Q I+ +    QN    S P       
Sbjct: 143 LNGKWILAYTSFSQLFPLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVS 202

Query: 183 VTANLKPLNTRKVAVQFD------------------------------------------ 233
             A  +  + ++V ++FD                                          
Sbjct: 203 TNAKFEVRSPKRVQIKFDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAA 262

BLAST of Lcy08g002710 vs. ExPASy TrEMBL
Match: A0A6J1JGL8 (probable plastid-lipid-associated protein 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486716 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115
Identity = 220/243 (90.53%), Postives = 227/243 (93.42%), Query Frame = 0

Query: 1   MTMALSSSTVTPTLKLSPSSTSQPPRLLLRIPSNPISTALSSNNKLLTASPSDKWRLRIS 60
           M MALSSST+TPTLKLSP   SQP RLLLRIPSN  STA +S NKLLT +PSDKWRLRIS
Sbjct: 1   MAMALSSSTITPTLKLSPPPKSQPARLLLRIPSNTNSTAPTSINKLLTVAPSDKWRLRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLNSD 120
           FFPAFLKKGKDVGALKEELL+AIAPLDRGAEATPEDQEMVDQ+SR LEA NP KEPL SD
Sbjct: 61  FFPAFLKKGKDVGALKEELLEAIAPLDRGAEATPEDQEMVDQISRKLEAVNPMKEPLKSD 120

Query: 121 LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTS SILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL
Sbjct: 121 LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180

Query: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYR 240
           NT KVAVQFDTFKILGLIP+KAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYR
Sbjct: 181 NTTKVAVQFDTFKILGLIPIKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 240

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 243

BLAST of Lcy08g002710 vs. ExPASy TrEMBL
Match: A0A6J1EIS7 (probable plastid-lipid-associated protein 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434655 PE=3 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115
Identity = 220/243 (90.53%), Postives = 227/243 (93.42%), Query Frame = 0

Query: 1   MTMALSSSTVTPTLKLSPSSTSQPPRLLLRIPSNPISTALSSNNKLLTASPSDKWRLRIS 60
           M MALSSST+TPTLKLSP  TSQP RLLLRIPSN  S A +S NKLLTA+PSDKWRLRIS
Sbjct: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLNSD 120
           FFPAFLKKGKDVGALKEELL+AIAPLDRGAEATPEDQEMVDQ++R LEA NP KEPL SD
Sbjct: 61  FFPAFLKKGKDVGALKEELLEAIAPLDRGAEATPEDQEMVDQIARKLEAVNPIKEPLKSD 120

Query: 121 LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGIN DTLRAQNMESWPFFNQVTANLKPL
Sbjct: 121 LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINADTLRAQNMESWPFFNQVTANLKPL 180

Query: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYR 240
           NT KVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKM DPSYR
Sbjct: 181 NTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMNDPSYR 240

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 243

BLAST of Lcy08g002710 vs. ExPASy TrEMBL
Match: A0A0A0M3B4 (PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G665380 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.4e-106
Identity = 210/246 (85.37%), Postives = 220/246 (89.43%), Query Frame = 0

Query: 1   MTMALSSSTVTPTLKLSPSSTSQPPRLLLR-IPSNPISTALSSNNKLLTASPSDKWRLRI 60
           M +ALSSST TPT KL P STSQPPR LL  IPSNP     SSN  LLT+SPS KWRLRI
Sbjct: 3   MAVALSSSTATPTTKLWPPSTSQPPRFLLPIIPSNP-----SSNTNLLTSSPSHKWRLRI 62

Query: 61  SFFPAFLKKGK--DVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPL 120
           SFFPAFL KGK  +V ALK+ELLQAI PLDRGAEATPEDQEMVDQ+SR LEA NPTKEPL
Sbjct: 63  SFFPAFLNKGKGNNVTALKQELLQAIEPLDRGAEATPEDQEMVDQISRKLEAVNPTKEPL 122

Query: 121 NSDLLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANL 180
            SDLLNGKWELIYTTSRSILQTERPK LRS+ NYQGINVD+LRAQNMESWPFFNQVTA+L
Sbjct: 123 KSDLLNGKWELIYTTSRSILQTERPKFLRSKLNYQGINVDSLRAQNMESWPFFNQVTADL 182

Query: 181 KPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDP 240
           KPLN+RKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDP
Sbjct: 183 KPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDP 242

Query: 241 SYRVPV 244
           SYRVPV
Sbjct: 243 SYRVPV 243

BLAST of Lcy08g002710 vs. ExPASy TrEMBL
Match: A0A1S3B9I8 (probable plastid-lipid-associated protein 4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487254 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.7e-106
Identity = 208/245 (84.90%), Postives = 218/245 (88.98%), Query Frame = 0

Query: 1   MTMALSSSTVTPTLKLSPSSTSQPPRLLLRIPSNPISTALSSNNKLLTASPSDKWRLRIS 60
           M +ALSSSTVTPT K  P STSQPPR L  IPSNP     SSN  LLT+SPS KWRLRIS
Sbjct: 3   MAVALSSSTVTPTAKFWPPSTSQPPRFLPIIPSNP-----SSNTNLLTSSPSHKWRLRIS 62

Query: 61  FFPAFLKKGK--DVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLN 120
           FFPAFL KGK  +V ALK+ELLQAIAPLDRGAEATPEDQEMVDQ+SR LEA NP KEPL 
Sbjct: 63  FFPAFLNKGKGNNVTALKQELLQAIAPLDRGAEATPEDQEMVDQISRKLEAVNPIKEPLK 122

Query: 121 SDLLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLK 180
           SDLLNGKWELIYTTSRSILQTERPK  RSR NYQGINVD+LRAQNMESWPFFNQVTA+LK
Sbjct: 123 SDLLNGKWELIYTTSRSILQTERPKFFRSRINYQGINVDSLRAQNMESWPFFNQVTADLK 182

Query: 181 PLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPS 240
           PLN+RKVAVQFDTFKILGLIPVKAPGRARGEL+IT+LDEELRISRGDKGNLFILKMIDPS
Sbjct: 183 PLNSRKVAVQFDTFKILGLIPVKAPGRARGELDITYLDEELRISRGDKGNLFILKMIDPS 242

Query: 241 YRVPV 244
           YRVPV
Sbjct: 243 YRVPV 242

BLAST of Lcy08g002710 vs. ExPASy TrEMBL
Match: A0A6J1DS61 (probable plastid-lipid-associated protein 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023791 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.4e-104
Identity = 205/243 (84.36%), Postives = 220/243 (90.53%), Query Frame = 0

Query: 1   MTMALSSSTVTPTLKLSPSSTSQPPRLLLRIPSNPISTALSSNNKLLTASPSDKWRLRIS 60
           M M LSS +VTP LKLSP  TSQPPR LLR+PSNP +TA +S   +LT++PS KWR+RIS
Sbjct: 1   MAMPLSSPSVTPALKLSPPLTSQPPR-LLRLPSNPTTTAPTS---VLTSAPSAKWRVRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLNSD 120
           FFPAFL K KDV ALK+ELL+AIAPLDRGAEATPED+EMV+Q+S  LEAANP KEPL S+
Sbjct: 61  FFPAFLNKRKDVSALKQELLEAIAPLDRGAEATPEDREMVNQISCKLEAANPVKEPLKSN 120

Query: 121 LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTSRSILQTERPK LRSRTNYQGINVDTLRAQNMES PFFNQVTANL PL
Sbjct: 121 LLNGKWELIYTTSRSILQTERPKFLRSRTNYQGINVDTLRAQNMESGPFFNQVTANLMPL 180

Query: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYR 240
           NTRKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYR
Sbjct: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 239

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 239

BLAST of Lcy08g002710 vs. NCBI nr
Match: XP_023532027.1 (probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 432.6 bits (1111), Expect = 2.3e-117
Identity = 224/243 (92.18%), Postives = 230/243 (94.65%), Query Frame = 0

Query: 1   MTMALSSSTVTPTLKLSPSSTSQPPRLLLRIPSNPISTALSSNNKLLTASPSDKWRLRIS 60
           M MALSSST+TPTLKLSP  TSQ  RLLLRIPSNP S A +S NKLLTA+PSDKWRLRIS
Sbjct: 1   MAMALSSSTITPTLKLSPPPTSQSARLLLRIPSNPNSAAPTSINKLLTAAPSDKWRLRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLNSD 120
           FFPAFLKKGKDVGALKEELL+AIAPLDRGAEATPEDQEMVDQ+SR LEA NPTKEPL SD
Sbjct: 61  FFPAFLKKGKDVGALKEELLEAIAPLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKSD 120

Query: 121 LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTS SILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL
Sbjct: 121 LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180

Query: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYR 240
           NTRKVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYR
Sbjct: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 240

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 243

BLAST of Lcy08g002710 vs. NCBI nr
Match: KAG6588812.1 (putative plastid-lipid-associated protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116
Identity = 223/243 (91.77%), Postives = 229/243 (94.24%), Query Frame = 0

Query: 1   MTMALSSSTVTPTLKLSPSSTSQPPRLLLRIPSNPISTALSSNNKLLTASPSDKWRLRIS 60
           M MALSSST+TPTLKLSP  TSQP RLLLRIPSN  S A +S NKLLTA+PSDKWRLRIS
Sbjct: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLNSD 120
           FFPAFLKKGKDVGALKEELL+AIAPLDRGAEATPEDQEMVDQ+SR LEA NPTKEPL SD
Sbjct: 61  FFPAFLKKGKDVGALKEELLEAIAPLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKSD 120

Query: 121 LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTS SILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL
Sbjct: 121 LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180

Query: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYR 240
           NT KVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYR
Sbjct: 181 NTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 240

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 243

BLAST of Lcy08g002710 vs. NCBI nr
Match: KAG7022580.1 (putative plastid-lipid-associated protein 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427.2 bits (1097), Expect = 9.7e-116
Identity = 222/243 (91.36%), Postives = 228/243 (93.83%), Query Frame = 0

Query: 1   MTMALSSSTVTPTLKLSPSSTSQPPRLLLRIPSNPISTALSSNNKLLTASPSDKWRLRIS 60
           M MALSSST+TPTLKLSP  TSQP RLLLRIPSN  S A +S NKLLTA+PSDKWRLRIS
Sbjct: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLNSD 120
           FFPAFLKKGKDVGALKEELL+AIA LDRGAEATPEDQEMVDQ+SR LEA NPTKEPL SD
Sbjct: 61  FFPAFLKKGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKSD 120

Query: 121 LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTS SILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL
Sbjct: 121 LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180

Query: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYR 240
           NT KVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYR
Sbjct: 181 NTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 240

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 243

BLAST of Lcy08g002710 vs. NCBI nr
Match: XP_022989717.1 (probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 425.6 bits (1093), Expect = 2.8e-115
Identity = 220/243 (90.53%), Postives = 227/243 (93.42%), Query Frame = 0

Query: 1   MTMALSSSTVTPTLKLSPSSTSQPPRLLLRIPSNPISTALSSNNKLLTASPSDKWRLRIS 60
           M MALSSST+TPTLKLSP   SQP RLLLRIPSN  STA +S NKLLT +PSDKWRLRIS
Sbjct: 1   MAMALSSSTITPTLKLSPPPKSQPARLLLRIPSNTNSTAPTSINKLLTVAPSDKWRLRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLNSD 120
           FFPAFLKKGKDVGALKEELL+AIAPLDRGAEATPEDQEMVDQ+SR LEA NP KEPL SD
Sbjct: 61  FFPAFLKKGKDVGALKEELLEAIAPLDRGAEATPEDQEMVDQISRKLEAVNPMKEPLKSD 120

Query: 121 LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTS SILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL
Sbjct: 121 LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180

Query: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYR 240
           NT KVAVQFDTFKILGLIP+KAPGRARGELEIT+LDEELRISRGDKGNLFILKMIDPSYR
Sbjct: 181 NTTKVAVQFDTFKILGLIPIKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 240

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 243

BLAST of Lcy08g002710 vs. NCBI nr
Match: XP_022927890.1 (probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita moschata] >XP_022927891.1 probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 424.9 bits (1091), Expect = 4.8e-115
Identity = 220/243 (90.53%), Postives = 227/243 (93.42%), Query Frame = 0

Query: 1   MTMALSSSTVTPTLKLSPSSTSQPPRLLLRIPSNPISTALSSNNKLLTASPSDKWRLRIS 60
           M MALSSST+TPTLKLSP  TSQP RLLLRIPSN  S A +S NKLLTA+PSDKWRLRIS
Sbjct: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLNSD 120
           FFPAFLKKGKDVGALKEELL+AIAPLDRGAEATPEDQEMVDQ++R LEA NP KEPL SD
Sbjct: 61  FFPAFLKKGKDVGALKEELLEAIAPLDRGAEATPEDQEMVDQIARKLEAVNPIKEPLKSD 120

Query: 121 LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGIN DTLRAQNMESWPFFNQVTANLKPL
Sbjct: 121 LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINADTLRAQNMESWPFFNQVTANLKPL 180

Query: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKMIDPSYR 240
           NT KVAVQFDTFKILGLIPVKAPGRARGELEIT+LDEELRISRGDKGNLFILKM DPSYR
Sbjct: 181 NTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMNDPSYR 240

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 243

BLAST of Lcy08g002710 vs. TAIR 10
Match: AT3G26070.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-69
Identity = 144/249 (57.83%), Postives = 181/249 (72.69%), Query Frame = 0

Query: 3   MALSSSTVTPTLKLSPSSTSQPPRLLLRIPSN-PISTALSSNNKLLTASPSDKWRLRI-- 62
           MAL S   T  L +SP++       L++  S   + T L S  K       D+ RLR+  
Sbjct: 1   MALPSCLKTGAL-MSPATGFNFSGSLMKSDSGFAVPTKLQSTRK------GDRERLRVQA 60

Query: 63  --SFFPAFLK---KGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTK 122
             SF PAFL    + +    LK+ELL+AI PL+RGA A+P+DQ  +DQL+R +EA NPTK
Sbjct: 61  IFSFPPAFLTRNGRAEKQKQLKQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNPTK 120

Query: 123 EPLNSDLLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVT 182
           EPL SDL+NGKWELIYTTS SILQ ++P+ LRS TNYQ INVDTL+ QNME+WPF+N VT
Sbjct: 121 EPLKSDLVNGKWELIYTTSASILQAKKPRFLRSITNYQSINVDTLKVQNMETWPFYNSVT 180

Query: 183 ANLKPLNTRKVAVQFDTFKILGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFILKM 242
            ++KPLN++KVAV+   FKILG IP+KAP  ARGELEIT++DEELR+SRGDKGNLFILKM
Sbjct: 181 GDIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELRLSRGDKGNLFILKM 240

Query: 243 IDPSYRVPV 244
            DP+YR+P+
Sbjct: 241 FDPTYRIPL 242

BLAST of Lcy08g002710 vs. TAIR 10
Match: AT3G26080.1 (plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 243.0 bits (619), Expect = 2.4e-64
Identity = 125/215 (58.14%), Postives = 159/215 (73.95%), Query Frame = 0

Query: 33  SNPISTALSSNNKLLTASPSDKWRLRIS---FFPAFLKKGKDVGALKEELLQAIAPLDRG 92
           ++P  +  +   KLL+    D+ RLRI     FP      +    LK EL++AI PL+RG
Sbjct: 20  NHPSDSGFAVPTKLLSIRKGDRERLRIQAVFSFPPRNGGAEKRKQLKHELVEAIEPLERG 79

Query: 93  AEATPEDQEMVDQLSRNLEAANPTKEPLNSDLLNGKWELIYTTSRSILQTERPKLLRSRT 152
           A A+P+DQ ++DQL+R +EA NPTKEPL SDL+NGKWELIYTTS +ILQ ++P+ LRS T
Sbjct: 80  ATASPDDQLLIDQLARKVEAVNPTKEPLKSDLINGKWELIYTTSAAILQAKKPRFLRSLT 139

Query: 153 NYQGINVDTLRAQNMESWPFFNQVTANLKPLNTRKVAVQFDTFKILGLIPVKAP-GRARG 212
           NYQ IN+DTL+ Q ME+WPF+N VT +L PLN++ VAV+   FKILG IPVKAP G ARG
Sbjct: 140 NYQCINMDTLKVQRMETWPFYNSVTGDLTPLNSKTVAVKLQVFKILGFIPVKAPDGTARG 199

Query: 213 ELEITFLDEELRISRGDKGNLFILKMIDPSYRVPV 244
           ELEIT++DEELRISRG    LFILKM DP+YR+P+
Sbjct: 200 ELEITYVDEELRISRGKGNLLFILKMFDPTYRIPL 234

BLAST of Lcy08g002710 vs. TAIR 10
Match: AT5G09820.2 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 61.6 bits (148), Expect = 9.9e-10
Identity = 56/198 (28.28%), Postives = 93/198 (46.97%), Query Frame = 0

Query: 72  VGALKEELLQAIAPLDRGAEATPEDQEM-VDQLSRNLEAANPTKEPLNS-DLLNGKWELI 131
           V  +KEEL +A+  ++RG      D++  ++ L + LE  NPT EP    D + G W+LI
Sbjct: 83  VSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLI 142

Query: 132 YTTSRSILQTERPK-----------LLRSRTNYQGINVDTL----RAQNMESWPFFNQVT 191
           Y+T  ++L ++R K           LL+     QG  V  L    R  N+    F  ++ 
Sbjct: 143 YSTI-TVLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGEF--RIV 202

Query: 192 ANLKPLNTRKVAVQFDTFKI----------------LGLIPVKAPGRARGELEITFLDEE 237
           A+ K  +   V + +++  I                LG+          G  EI++LDE+
Sbjct: 203 ASFKISSKSSVEITYESSTIKPDQLMNIFRKNMDLLLGIF------NPEGLFEISYLDED 262

BLAST of Lcy08g002710 vs. TAIR 10
Match: AT5G19940.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 56.6 bits (135), Expect = 3.2e-08
Identity = 51/182 (28.02%), Postives = 93/182 (51.10%), Query Frame = 0

Query: 66  LKKGKDVGALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLEAANPTKEPLNSDLLNGK 125
           L+ G D   L   LL  +A  D G   +PE  + V Q++  L+     KEP+ + L+ G 
Sbjct: 61  LRTGPD--DLISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQ-KYCVKEPVKNPLIFGD 120

Query: 126 WELIYTTS--------RSILQTERPKLLRSRTNYQGINV-DTLRAQ-NMESWPFFN---Q 185
           WE++Y +         RS++        +++   Q I+  D +R + ++ ++ F +    
Sbjct: 121 WEVVYCSRPTSPGGGYRSVIGR---LFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDVS 180

Query: 186 VTANLKPLNTRKVAVQFDTFKI-LGLIPVKAPGRARGELEITFLDEELRISRGDKGNLFI 234
           +T  LK L++  V V F+  +I +G +  K    +  +L IT++DE+LR+  G KG+LF+
Sbjct: 181 LTGKLKALDSEWVQVIFEPPEIKVGSLEFKYGFESEVKLRITYVDEKLRLGLGSKGSLFV 236

BLAST of Lcy08g002710 vs. TAIR 10
Match: AT3G23400.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-08
Identity = 72/255 (28.24%), Postives = 110/255 (43.14%), Query Frame = 0

Query: 17  SPSSTSQPPRLLLRIPSNPISTALSSNNKLLTASPSDKWRLRISFFPAFLKKG---KDVG 76
           SP +T +  RL   +P      A SS  ++     SD         P+    G   K + 
Sbjct: 33  SPLTTPKSSRLGFTVPEKRNLAANSSLVEVSIGGESDP-------PPSSSGSGGDDKQIA 92

Query: 77  ALKEELLQAIAPLDRGAEATPEDQEMVDQLSRNLE-AANPTKEPLNSDLLNGKWELIYTT 136
            LK +LL  ++ L+RG  A+ +D E  +  ++ LE A  P     + D L GKW L+Y++
Sbjct: 93  LLKLKLLSVVSGLNRGLVASVDDLERAEVAAKELETAGGPVDLTDDLDKLQGKWRLLYSS 152

Query: 137 --SRSILQTERPKLLRSR-------TNYQGINVDTLRAQNMES------WPFFN-QVTAN 196
             S   L   RP L   R         +Q I+V +    N+        WPF   + TA 
Sbjct: 153 AFSSRSLGGSRPGLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATAT 212

Query: 197 L----KPLNTRKVAVQFD--TFKILGLI----------------PVKAPGRARGELEITF 230
           L    + L T K+ + F+  T K  G +                P   PG   G+ E+T+
Sbjct: 213 LAHKFELLGTCKIKITFEKTTVKTSGNLSQIPPFDIPRLPDSFRPSSNPG--TGDFEVTY 272

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LU851.6e-6857.83Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thalia... [more]
Q6DBN23.4e-6358.14Probable plastid-lipid-associated protein 5, chloroplastic OS=Arabidopsis thalia... [more]
Q0JD857.4e-1032.65Fibrillin protein 5 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=FBN5 PE=... [more]
Q5M7551.4e-0828.28Fibrillin-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FBN5 PE=1 SV=1[more]
Q6K4394.1e-0827.19Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp... [more]
Match NameE-valueIdentityDescription
A0A6J1JGL81.4e-11590.53probable plastid-lipid-associated protein 4, chloroplastic OS=Cucurbita maxima O... [more]
A0A6J1EIS72.3e-11590.53probable plastid-lipid-associated protein 4, chloroplastic OS=Cucurbita moschata... [more]
A0A0A0M3B44.4e-10685.37PAP_fibrillin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G6653... [more]
A0A1S3B9I85.7e-10684.90probable plastid-lipid-associated protein 4, chloroplastic isoform X1 OS=Cucumis... [more]
A0A6J1DS615.4e-10484.36probable plastid-lipid-associated protein 4, chloroplastic OS=Momordica charanti... [more]
Match NameE-valueIdentityDescription
XP_023532027.12.3e-11792.18probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita pepo subsp... [more]
KAG6588812.11.1e-11691.77putative plastid-lipid-associated protein 4, chloroplastic, partial [Cucurbita a... [more]
KAG7022580.19.7e-11691.36putative plastid-lipid-associated protein 4, chloroplastic [Cucurbita argyrosper... [more]
XP_022989717.12.8e-11590.53probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita maxima][more]
XP_022927890.14.8e-11590.53probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita moschata] ... [more]
Match NameE-valueIdentityDescription
AT3G26070.11.1e-6957.83Plastid-lipid associated protein PAP / fibrillin family protein [more]
AT3G26080.12.4e-6458.14plastid-lipid associated protein PAP / fibrillin family protein [more]
AT5G09820.29.9e-1028.28Plastid-lipid associated protein PAP / fibrillin family protein [more]
AT5G19940.13.2e-0828.02Plastid-lipid associated protein PAP / fibrillin family protein [more]
AT3G23400.14.2e-0828.24Plastid-lipid associated protein PAP / fibrillin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 75..233
e-value: 9.5E-38
score: 130.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR31906:SF14PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATEDcoord: 18..243
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 18..243
IPR019825Legume lectin, beta chain, Mn/Ca-binding sitePROSITEPS00307LECTIN_LEGUME_BETAcoord: 185..191

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g002710.1Lcy08g002710.1mRNA