Lcy08g001660 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g001660
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	transcription factor bHLH113
Location	Chr08: 2181049 .. 2182938 (+)
RNA-Seq Expression	Lcy08g001660
Synteny	Lcy08g001660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGTCTCTGCTTTGGACATCGAAACCCACGGTCTTCTCGGGCCCGGAACATTTGACCAAAAACCAAACCTAAACCTCGTAACTCTAAAAAAAAAAAACAAAACAAAAAATCACTTCACTCTTCCTCCACCACTCATTCATCGTAATCGAAATCCACAATAACCCCTTTTTCAAGAGTTTCCGATGTAATGAGACATGTAGTTCTGCTCTGTTGAATATGGGAGAGAAATTGTGAAAGTGTCCCAGTTTTGTATCCAGAAGAATTTAAAGATGTACACCCGACTCATTTCACAGGAATAATCATTTATCCAATAATCCACTGCTCCTCACTCACAGAAAGAGCAAAAGTTCTTCCTTTAAAAAGAGACAGTCTATTTCAGACTCTGTTTTTTCTGAAGCAGAGCTTCTCATTAATGGCGGAAAATCAATCCTTTGATGGGGACGAGCTCGGACCAACGACGACGACAGCCACCACTTTTTCTCAGCTTCTGTTTGCTGCAGATCATGATGACGACGATCATCGTGATGATCTTGAAAAACGTCATCATCAAATCTTCAATTACTCTGTTTCTGGCTCTTCTTCTTTCGCCATTGAAAATCCGCCCAAGATGCTCTGTTTTGGCAGCAAGGAAGAGGATCAAGAACAGCCACAGCTGGTTTTCAACTCGCGTCAAAGATCCGGCCGCACATGCAGCGATTCCTCTTCTGCTTCTTCCGGAAACGGCCTCAAATCTGATTCTGTAAACAGAAAAGTTTCGAAGCTTTTTTTAAAATCTTCTTTCCTCTGTTTTCGTTTCGATTTTTCAGCTCGAACTGTTTGTTCGTTCGTTTGTAGAAATCGAAGAGGAGAAATGGGTCAAACCCAGAAACGGCCGCCATTAAAGCAGCTTCAAAGAAGATCAAACCCGATGCTCCCTGTTCTGCCGGACATGCAAAGGTCAAATTTTTCTTCATGTTCTTCTCTCGCTTTTACTCTGTTTCTCAAATGGGTTTTCGTTTTTTCGTGATGTTCAGAGAAAGGAGAAATTAGGGGAAAGAATCACAGCGCTACAGCAATTGGTTTCACCATTTGGCAAGGTCGCAAAACGAAAACACTTGATTTCATTTTCTTTTCAATTTCAAGAAACTGATTACGAAATTTTTGCACAAACAGACAGACACAGCATCAGTTCTTCACGAGGCAATGGGCTACATAAAGTTTCTACACGAGCAAGTTCAAGTGTTGTGCAGCCCTTACCTGCAGCAGAGCCAGCTGATTTCTTCTGAAACAGCCAGTGTAAGCACTTTCTGTCCCAAAAGCAGAAGCATTTTTTGAACTTCTTTTGTTTGTTGATCTCTGTGCAATGGCTGATGAGATAGGGGAAAAGAGAGGGGGATCTGAGAAGCAGAGGGCTGTACTTGATTCCAGTGGACTGTAGCTTGCATTTGGCCAATTGTACAGTTGCAGACTTTTGGTCACCAGCCATGGCAATGGGGAAGAAGCAGCTGTGAGAGAAGAGGAAATGGTGGGGTTTTGGAGTTTGATGTGTACAGAGAAAGGGGGGTTTGGTTTGGTGCTTTTTTTTTTGACTTATAACTTTTGTAAGTTTAGATGAATCAGAATATAGCAGAAGATGTTTGTGAAGAAGGTGTAAATCAAGATCAACACTTCAAAGGAATAGATGTGAAAAGGTGTTTTGTTGTACTTTTACTTTTGTTTCTTCTCTTCCTCTTTTTAGGGGTTTCAGTTGTTAACTTGTTGTTTGGATCATTCTTTTGGAAGAGAGAGAGAGAGAGGTGTAGGGATCTTCACAAGGGTTTTGGTTAGTTTTGAATAATACTTAGCTTCTGACATCTTCCTATGTACCCTATTGAAATCTTAAAAACTAAACAAAGAAAAATGTATTCTCT

mRNA sequence

TCTGTCTCTGCTTTGGACATCGAAACCCACGGTCTTCTCGGGCCCGGAACATTTGACCAAAAACCAAACCTAAACCTCGTAACTCTAAAAAAAAAAAACAAAACAAAAAATCACTTCACTCTTCCTCCACCACTCATTCATCGTAATCGAAATCCACAATAACCCCTTTTTCAAGAGTTTCCGATGTAATGAGACATGTAGTTCTGCTCTGTTGAATATGGGAGAGAAATTGTGAAAGTGTCCCAGTTTTGTATCCAGAAGAATTTAAAGATGTACACCCGACTCATTTCACAGGAATAATCATTTATCCAATAATCCACTGCTCCTCACTCACAGAAAGAGCAAAAGTTCTTCCTTTAAAAAGAGACAGTCTATTTCAGACTCTGTTTTTTCTGAAGCAGAGCTTCTCATTAATGGCGGAAAATCAATCCTTTGATGGGGACGAGCTCGGACCAACGACGACGACAGCCACCACTTTTTCTCAGCTTCTGTTTGCTGCAGATCATGATGACGACGATCATCGTGATGATCTTGAAAAACGTCATCATCAAATCTTCAATTACTCTGTTTCTGGCTCTTCTTCTTTCGCCATTGAAAATCCGCCCAAGATGCTCTGTTTTGGCAGCAAGGAAGAGGATCAAGAACAGCCACAGCTGGTTTTCAACTCGCGTCAAAGATCCGGCCGCACATGCAGCGATTCCTCTTCTGCTTCTTCCGGAAACGGCCTCAAATCTGATTCTAAATCGAAGAGGAGAAATGGGTCAAACCCAGAAACGGCCGCCATTAAAGCAGCTTCAAAGAAGATCAAACCCGATGCTCCCTGTTCTGCCGGACATGCAAAGAGAAAGGAGAAATTAGGGGAAAGAATCACAGCGCTACAGCAATTGGTTTCACCATTTGGCAAGACAGACACAGCATCAGTTCTTCACGAGGCAATGGGCTACATAAAGTTTCTACACGAGCAAGTTCAAGTGTTGTGCAGCCCTTACCTGCAGCAGAGCCAGCTGATTTCTTCTGAAACAGCCAGTGGGAAAAGAGAGGGGGATCTGAGAAGCAGAGGGCTGTACTTGATTCCAGTGGACTGTAGCTTGCATTTGGCCAATTGTACAGTTGCAGACTTTTGGTCACCAGCCATGGCAATGGGGAAGAAGCAGCTGTGAGAGAAGAGGAAATGGTGGGGTTTTGGAGTTTGATGTGTACAGAGAAAGGGGGGTTTGGTTTGGTGCTTTTTTTTTTGACTTATAACTTTTGTAAGTTTAGATGAATCAGAATATAGCAGAAGATGTTTGTGAAGAAGGTGTAAATCAAGATCAACACTTCAAAGGAATAGATGTGAAAAGGTGTTTTGTTGTACTTTTACTTTTGTTTCTTCTCTTCCTCTTTTTAGGGGTTTCAGTTGTTAACTTGTTGTTTGGATCATTCTTTTGGAAGAGAGAGAGAGAGAGGTGTAGGGATCTTCACAAGGGTTTTGGTTAGTTTTGAATAATACTTAGCTTCTGACATCTTCCTATGTACCCTATTGAAATCTTAAAAACTAAACAAAGAAAAATGTATTCTCT

Coding sequence (CDS)

ATGGCGGAAAATCAATCCTTTGATGGGGACGAGCTCGGACCAACGACGACGACAGCCACCACTTTTTCTCAGCTTCTGTTTGCTGCAGATCATGATGACGACGATCATCGTGATGATCTTGAAAAACGTCATCATCAAATCTTCAATTACTCTGTTTCTGGCTCTTCTTCTTTCGCCATTGAAAATCCGCCCAAGATGCTCTGTTTTGGCAGCAAGGAAGAGGATCAAGAACAGCCACAGCTGGTTTTCAACTCGCGTCAAAGATCCGGCCGCACATGCAGCGATTCCTCTTCTGCTTCTTCCGGAAACGGCCTCAAATCTGATTCTAAATCGAAGAGGAGAAATGGGTCAAACCCAGAAACGGCCGCCATTAAAGCAGCTTCAAAGAAGATCAAACCCGATGCTCCCTGTTCTGCCGGACATGCAAAGAGAAAGGAGAAATTAGGGGAAAGAATCACAGCGCTACAGCAATTGGTTTCACCATTTGGCAAGACAGACACAGCATCAGTTCTTCACGAGGCAATGGGCTACATAAAGTTTCTACACGAGCAAGTTCAAGTGTTGTGCAGCCCTTACCTGCAGCAGAGCCAGCTGATTTCTTCTGAAACAGCCAGTGGGAAAAGAGAGGGGGATCTGAGAAGCAGAGGGCTGTACTTGATTCCAGTGGACTGTAGCTTGCATTTGGCCAATTGTACAGTTGCAGACTTTTGGTCACCAGCCATGGCAATGGGGAAGAAGCAGCTGTGA

Protein sequence

MAENQSFDGDELGPTTTTATTFSQLLFAADHDDDDHRDDLEKRHHQIFNYSVSGSSSFAIENPPKMLCFGSKEEDQEQPQLVFNSRQRSGRTCSDSSSASSGNGLKSDSKSKRRNGSNPETAAIKAASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQVQVLCSPYLQQSQLISSETASGKREGDLRSRGLYLIPVDCSLHLANCTVADFWSPAMAMGKKQL

Homology

[Close]

BLAST of Lcy08g001660 vs. ExPASy Swiss-Prot
Match: Q9LT67 (Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-29
Identity = 97/242 (40.08%), Postives = 131/242 (54.13%), Query Frame = 0


Query: 20  TTFSQLLFAADHDDDDHRDDLEKRHHQIFNYSVSGSSS----FAIENPPKMLCFGSKEED 79
           T+FS+LL  +D       D     H    N    G  S    F+ +   +MLCF    ++
Sbjct: 20  TSFSELLMFSDGVLSSSSD-----HQPEGNVGDGGEDSLGFVFSGKTGSRMLCFSGGYQN 79

Query: 80  QEQPQLVFNSRQRSGRT----------CSDSSSASS-GNGLKSDSKSKRRNGSNPETAAI 139
            ++   +  S   SG +          C +S+ A +     KS +K +   G+  E+   
Sbjct: 80  DDESLFLEPSVPTSGVSDLDPSCIKIDCRNSNDACTVDKSTKSSTKKRTGTGNGQESDQN 139

Query: 140 KAASKKIKPD-APCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLH 199
           +   KK K +    S G AK RKE+LGERI ALQQLVSP+GKTD ASVLHEAMGYIKFL 
Sbjct: 140 RKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQ 199

Query: 200 EQVQVLCSPYLQQSQL----ISSETASGKREGDLRSRGLYLIPVDCSLHLANCTVADFWS 241
           +Q+QVLCSPYL    L    ++ +  +  +  DLRSRGL L+PV  ++H+ N   ADFWS
Sbjct: 200 DQIQVLCSPYLINHSLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTVHVENSNGADFWS 256

[Close]

BLAST of Lcy08g001660 vs. ExPASy Swiss-Prot
Match: Q8GXT3 (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.2e-24
Identity = 67/139 (48.20%), Postives = 84/139 (60.43%), Query Frame = 0


Query: 107 SDSKSKRRNGSNPETAAIKAASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTD 166
           S S   +R G++ + AA     K+ K +A   +   KRKEK+G+RI ALQQLVSPFGKTD
Sbjct: 314 SSSNEVKRGGNDHQPAA-----KRAKSEAASPSPAFKRKEKMGDRIAALQQLVSPFGKTD 373

Query: 167 TASVLHEAMGYIKFLHEQVQVLCSPY------LQQSQLISSETASGKREGDLRSRGLYLI 226
            ASVL EA+ YIKFLH+QV  L +PY      LQ  Q   S       E DLRSRGL L+
Sbjct: 374 AASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHSTELEVSEEPDLRSRGLCLV 433

Query: 227 PVDCSLHLANCTVADFWSP 240
           PV  +  + + T  DFW+P
Sbjct: 434 PVSSTFPVTHDTTVDFWTP 447

[Close]

BLAST of Lcy08g001660 vs. ExPASy Swiss-Prot
Match: Q7XJU2 (Transcription factor bHLH153 OS=Arabidopsis thaliana OX=3702 GN=BHLH153 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.6e-21
Identity = 56/115 (48.70%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 125 KAASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQ 184
           +++ K+ K D   S+   +RK+K+GERI+ALQQ+VSP+GKTDTASVL +AM YI+FLHEQ
Sbjct: 22  ESSIKRHKSDLSFSS--KERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQ 81

Query: 185 VQVLCSPYLQQSQLISSETASGKREGDLRSRGLYLIPVDCSLHLANCTVADFWSP 240
           V+VL +PYL   Q +   T     +  LR+RGL L+P++ ++ +A    AD W+P
Sbjct: 82  VKVLSAPYL---QTVPDATQEELEQYSLRNRGLCLVPMENTVGVAQSNGADIWAP 131

[Close]

BLAST of Lcy08g001660 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.3e-21
Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 0


Query: 106 KSDSKSKRRNGSNPETAAIKAASKKIKPDAPCSAGHAK-RKEKLGERITALQQLVSPFGK 165
           ++ S+S +R   N      ++A+KK +   P      K RKE L ++IT+LQQLVSPFGK
Sbjct: 249 RAQSESLKRAKDN------ESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGK 308

Query: 166 TDTASVLHEAMGYIKFLHEQVQVLCSPYL------QQSQLIS--SETASGKREGDLRSRG 225
           TDTASVL EA+ YIKFLH+QV VL +PY+      QQ Q IS  S++       +LR  G
Sbjct: 309 TDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHG 368

Query: 226 LYLIPVDCSLHLANCTVADFWSP 240
           L L+P+  +  +AN T ADFW+P
Sbjct: 369 LCLVPISSTFPVANETTADFWTP 385

[Close]

BLAST of Lcy08g001660 vs. ExPASy Swiss-Prot
Match: Q7XJU1 (Transcription factor bHLH154 OS=Arabidopsis thaliana OX=3702 GN=BHLH154 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.5e-21
Identity = 54/97 (55.67%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 143 KRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQVQVLCSPYLQQSQLISSE 202
           +RK+KL ERI+ALQQLVSP+GKTDTASVL E M YI+FL EQV+VL +PYLQ +    S 
Sbjct: 40  ERKDKLAERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVLSAPYLQAT---PST 99

Query: 203 TASGKREGDLRSRGLYLIPVDCSLHLANCTVADFWSP 240
           T     E  LRS+GL L+P++ +  +A    AD W+P
Sbjct: 100 TEEEVEEYSLRSKGLCLVPLEYTSEVAQTNGADIWAP 133

[Close]

BLAST of Lcy08g001660 vs. ExPASy TrEMBL
Match: A0A1S3BZZ3 (transcription factor bHLH113 OS=Cucumis melo OX=3656 GN=LOC103495283 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.5e-104
Identity = 207/252 (82.14%), Postives = 221/252 (87.70%), Query Frame = 0


Query: 1   MAENQSFDGDELGPTTTTATTFSQLLFAADHDDDDHRD-DLEKRHHQIFNYSV-SGSSSF 60
           MAENQSF GD L P  TTATTFSQLLF+  HDDDD  D D++K HHQIF+YSV S SSSF
Sbjct: 1   MAENQSFAGDHLRP--TTATTFSQLLFSPHHDDDDDNDVDVDKNHHQIFDYSVSSSSSSF 60

Query: 61  AIENPPKMLCFGSKEEDQEQPQLVFNSRQRSGRTCSDSSSASSGNGLKSDSKSKRRNGSN 120
           AI+NPPKMLCFG+KEEDQE PQL F SRQRS   CSDSSS SSGNGLK + K KRRNGSN
Sbjct: 61  AIDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGSN 120

Query: 121 PETAAIKAASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYI 180
           PETAAIK ASKK KP+APCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYI
Sbjct: 121 PETAAIKEASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYI 180

Query: 181 KFLHEQVQVLCSPYLQQSQLISSETASGKR----EGDLRSRGLYLIPVDCSLHLANCTVA 240
           KFLHEQVQVLCSPYLQ+SQL+SS++A+GK     EGDL+SRGL LIPVDCSLHLANCTVA
Sbjct: 181 KFLHEQVQVLCSPYLQKSQLLSSQSATGKENGETEGDLKSRGLCLIPVDCSLHLANCTVA 240

Query: 241 DFWSPAMAMGKK 247
           DFWSPAMAMGKK
Sbjct: 241 DFWSPAMAMGKK 250

[Close]

BLAST of Lcy08g001660 vs. ExPASy TrEMBL
Match: A0A0A0K7T3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071650 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.8e-102
Identity = 204/255 (80.00%), Postives = 220/255 (86.27%), Query Frame = 0


Query: 1   MAENQSFDGDELGPTTTTATTFSQLLFAADHDDDDHRD---DLEKRHHQIFNYSV--SGS 60
           MAENQSF GD L P  TTATTFSQLLF+  HDDDD  D   D+++ HHQIF+YSV  S S
Sbjct: 1   MAENQSFTGDHLRP--TTATTFSQLLFSPHHDDDDDNDVDVDVDQNHHQIFDYSVSSSSS 60

Query: 61  SSFAIENPPKMLCFGSKEEDQEQPQLVFNSRQRSGRTCSDSSSASSGNGLKSDSKSKRRN 120
           SSFAI+NPPKMLCFG+KEEDQE PQL F SRQRS   CSDSSS SSGNGLK + K KRRN
Sbjct: 61  SSFAIDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRN 120

Query: 121 GSNPETAAIKAASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAM 180
           GSNPE AAIK ASKK KP+APCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAM
Sbjct: 121 GSNPEMAAIKEASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAM 180

Query: 181 GYIKFLHEQVQVLCSPYLQQSQLISSETASGK----REGDLRSRGLYLIPVDCSLHLANC 240
           GYIKFLHEQVQVLCSPYLQ+SQL+SS++A+G+     EGDL+SRGL LIPVDCSLHLANC
Sbjct: 181 GYIKFLHEQVQVLCSPYLQKSQLLSSQSATGRGNEETEGDLKSRGLCLIPVDCSLHLANC 240

Query: 241 TVADFWSPAMAMGKK 247
           TVADFWSPAMAMGKK
Sbjct: 241 TVADFWSPAMAMGKK 253

[Close]

BLAST of Lcy08g001660 vs. ExPASy TrEMBL
Match: A0A5D3C900 (Transcription factor bHLH113 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00980 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 6.1e-79
Identity = 158/185 (85.41%), Postives = 167/185 (90.27%), Query Frame = 0


Query: 66  MLCFGSKEEDQEQPQLVFNSRQRSGRTCSDSSSASSGNGLKSDSKSKRRNGSNPETAAIK 125
           MLCFG+KEEDQE PQL F SRQRS   CSDSSS SSGNGLK + K KRRNGSNPETAAIK
Sbjct: 1   MLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGSNPETAAIK 60

Query: 126 AASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQV 185
            ASKK KP+APCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQV
Sbjct: 61  EASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQV 120

Query: 186 QVLCSPYLQQSQLISSETASGKR----EGDLRSRGLYLIPVDCSLHLANCTVADFWSPAM 245
           QVLCSPYLQ+SQL+SS++A+GK     EGDL+SRGL LIPVDCSLHLANCTVADFWSPAM
Sbjct: 121 QVLCSPYLQKSQLLSSQSATGKENGETEGDLKSRGLCLIPVDCSLHLANCTVADFWSPAM 180

Query: 246 AMGKK 247
           AMGKK
Sbjct: 181 AMGKK 185

[Close]

BLAST of Lcy08g001660 vs. ExPASy TrEMBL
Match: A0A6J1I8M4 (transcription factor bHLH113 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470999 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.7e-76
Identity = 172/262 (65.65%), Postives = 192/262 (73.28%), Query Frame = 0


Query: 1   MAENQSFDGDELGPTTTTATTFSQLLFAADHDDDDHRDDLEKR---HHQIFNYSVSGSSS 60
           MAENQS   D   P T  ATTFSQLLF+ADHD+ D   D++K    HHQIF YSV  SSS
Sbjct: 112 MAENQSSGRD---PKTAAATTFSQLLFSADHDEYD-EIDVDKHHHVHHQIFEYSV--SSS 171

Query: 61  FAIENPPKMLCFGSKEEDQEQPQLVFNSRQRSGRTCSDSSSASSGNGLKSDSKSKRRNGS 120
           FAIENPPKMLCFG+K+E QE PQL      RS   CSDS               KR+NGS
Sbjct: 172 FAIENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGS 231

Query: 121 NPETAAIK-------AASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180
           NPET AIK        ASKK KP+APCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV
Sbjct: 232 NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 291

Query: 181 LHEAMGYIKFLHEQVQVLCSPYLQQSQLISS------ETASGKREGDLRSRGLYLIPVDC 240
           LHEAMGYIKFLHEQ+QVL SPYL ++QL+S+         +G+ EG+++ RGL LIPV+C
Sbjct: 292 LHEAMGYIKFLHEQIQVLYSPYLDKNQLVSTLFQKTEGRGNGETEGEMKGRGLCLIPVEC 348

Query: 241 SLHLANCTVADFWSPAMAMGKK 247
           SLHLANCTVADFWSPAMAMG+K
Sbjct: 352 SLHLANCTVADFWSPAMAMGRK 348

[Close]

BLAST of Lcy08g001660 vs. ExPASy TrEMBL
Match: A0A6J1GL82 (transcription factor bHLH113 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455286 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.1e-75
Identity = 172/256 (67.19%), Postives = 189/256 (73.83%), Query Frame = 0


Query: 1   MAENQSFDGDELGPTTTTATTFSQLLFAADHDDDDHRDDLEKR---HHQIFNYSVSGSSS 60
           MAENQS   D   P T  ATTFSQLLF+A+HD+DD   D++K    HHQIF YSV  SSS
Sbjct: 1   MAENQSSGRD---PKTAAATTFSQLLFSANHDEDDD-IDVDKHHHVHHQIFEYSV--SSS 60

Query: 61  FAIENPPKMLCFGSKEEDQEQPQLVFNSRQRSGRTCSDSSSASSGNGLKSDSKSKRRNGS 120
           FAIENPPKMLCFG+K+E QE PQL      RS   CSDS               KR+NGS
Sbjct: 61  FAIENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGS 120

Query: 121 NPETAAIK-------AASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180
           NPET AIK        ASKK KP+APCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV
Sbjct: 121 NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180

Query: 181 LHEAMGYIKFLHEQVQVLCSPYLQQSQLISSETASGKREGDLRSRGLYLIPVDCSLHLAN 240
           LHEAMGYIKFLHEQ+QVL SPYL ++QL      +G  EG+L+ RGL LIPV+CSLHLAN
Sbjct: 181 LHEAMGYIKFLHEQIQVLYSPYLDKNQL---GGGNGDTEGELKGRGLCLIPVECSLHLAN 228

Query: 241 CTVADFWSPAMAMGKK 247
           CTVADFWSPAMAMG+K
Sbjct: 241 CTVADFWSPAMAMGRK 228

[Close]

BLAST of Lcy08g001660 vs. NCBI nr
Match: XP_008455002.1 (PREDICTED: transcription factor bHLH113 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 5.1e-104
Identity = 207/252 (82.14%), Postives = 221/252 (87.70%), Query Frame = 0


Query: 1   MAENQSFDGDELGPTTTTATTFSQLLFAADHDDDDHRD-DLEKRHHQIFNYSV-SGSSSF 60
           MAENQSF GD L P  TTATTFSQLLF+  HDDDD  D D++K HHQIF+YSV S SSSF
Sbjct: 1   MAENQSFAGDHLRP--TTATTFSQLLFSPHHDDDDDNDVDVDKNHHQIFDYSVSSSSSSF 60

Query: 61  AIENPPKMLCFGSKEEDQEQPQLVFNSRQRSGRTCSDSSSASSGNGLKSDSKSKRRNGSN 120
           AI+NPPKMLCFG+KEEDQE PQL F SRQRS   CSDSSS SSGNGLK + K KRRNGSN
Sbjct: 61  AIDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGSN 120

Query: 121 PETAAIKAASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYI 180
           PETAAIK ASKK KP+APCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYI
Sbjct: 121 PETAAIKEASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYI 180

Query: 181 KFLHEQVQVLCSPYLQQSQLISSETASGKR----EGDLRSRGLYLIPVDCSLHLANCTVA 240
           KFLHEQVQVLCSPYLQ+SQL+SS++A+GK     EGDL+SRGL LIPVDCSLHLANCTVA
Sbjct: 181 KFLHEQVQVLCSPYLQKSQLLSSQSATGKENGETEGDLKSRGLCLIPVDCSLHLANCTVA 240

Query: 241 DFWSPAMAMGKK 247
           DFWSPAMAMGKK
Sbjct: 241 DFWSPAMAMGKK 250

[Close]

BLAST of Lcy08g001660 vs. NCBI nr
Match: XP_004137092.1 (transcription factor bHLH113 [Cucumis sativus] >KGN43876.1 hypothetical protein Csa_017145 [Cucumis sativus])

HSP 1 Score: 382.1 bits (980), Expect = 3.6e-102
Identity = 204/255 (80.00%), Postives = 220/255 (86.27%), Query Frame = 0


Query: 1   MAENQSFDGDELGPTTTTATTFSQLLFAADHDDDDHRD---DLEKRHHQIFNYSV--SGS 60
           MAENQSF GD L P  TTATTFSQLLF+  HDDDD  D   D+++ HHQIF+YSV  S S
Sbjct: 1   MAENQSFTGDHLRP--TTATTFSQLLFSPHHDDDDDNDVDVDVDQNHHQIFDYSVSSSSS 60

Query: 61  SSFAIENPPKMLCFGSKEEDQEQPQLVFNSRQRSGRTCSDSSSASSGNGLKSDSKSKRRN 120
           SSFAI+NPPKMLCFG+KEEDQE PQL F SRQRS   CSDSSS SSGNGLK + K KRRN
Sbjct: 61  SSFAIDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRN 120

Query: 121 GSNPETAAIKAASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAM 180
           GSNPE AAIK ASKK KP+APCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAM
Sbjct: 121 GSNPEMAAIKEASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAM 180

Query: 181 GYIKFLHEQVQVLCSPYLQQSQLISSETASGK----REGDLRSRGLYLIPVDCSLHLANC 240
           GYIKFLHEQVQVLCSPYLQ+SQL+SS++A+G+     EGDL+SRGL LIPVDCSLHLANC
Sbjct: 181 GYIKFLHEQVQVLCSPYLQKSQLLSSQSATGRGNEETEGDLKSRGLCLIPVDCSLHLANC 240

Query: 241 TVADFWSPAMAMGKK 247
           TVADFWSPAMAMGKK
Sbjct: 241 TVADFWSPAMAMGKK 253

[Close]

BLAST of Lcy08g001660 vs. NCBI nr
Match: XP_038888642.1 (transcription factor bHLH113-like [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 7.6e-100
Identity = 205/263 (77.95%), Postives = 222/263 (84.41%), Query Frame = 0


Query: 1   MAENQSFDGDELGPTTTTATTFSQLLFAADHDD--DDHRDDLEKR---HHQIFNYSV-SG 60
           MA+NQSF GD LGP  TTATTFSQLLF++ HDD  DD   D++K    HHQIF+YSV S 
Sbjct: 1   MADNQSFSGDHLGP--TTATTFSQLLFSSQHDDETDDIDVDVDKSHPLHHQIFDYSVSSA 60

Query: 61  SSSFAIENPPKMLCFGSKEEDQEQPQLVFNSRQRSGRTCSDSSSASSGNGLKSDSKSKRR 120
           S+SFAI+NPPKMLCFGSKEED++ PQL F SRQRS   CSDSSS SSGNGLKSDSK KRR
Sbjct: 61  SASFAIDNPPKMLCFGSKEEDEDHPQLGFKSRQRSSHACSDSSSTSSGNGLKSDSKLKRR 120

Query: 121 NGSNPETAAIK-------AASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDT 180
           NGSNPETAAIK        ASKK K DAPCSAGHAKRKEKLGERITALQQLVSPFGKTDT
Sbjct: 121 NGSNPETAAIKEASLLNQKASKKTKSDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDT 180

Query: 181 ASVLHEAMGYIKFLHEQVQVLCSPYLQQSQLISSETASGKR----EGDLRSRGLYLIPVD 240
           ASVLHEAMGYIKFLHEQVQVLCSPYLQ+SQL+SS++ SG+     EGDL+SRGL LIPVD
Sbjct: 181 ASVLHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSVSGRENGETEGDLKSRGLCLIPVD 240

Query: 241 CSLHLANCTVADFWSPAMAMGKK 247
           CSLHLANCTVADFWSPAMAMG+K
Sbjct: 241 CSLHLANCTVADFWSPAMAMGRK 261

[Close]

BLAST of Lcy08g001660 vs. NCBI nr
Match: KAA0031343.1 (transcription factor bHLH113 [Cucumis melo var. makuwa] >TYK06796.1 transcription factor bHLH113 [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 1.3e-78
Identity = 158/185 (85.41%), Postives = 167/185 (90.27%), Query Frame = 0


Query: 66  MLCFGSKEEDQEQPQLVFNSRQRSGRTCSDSSSASSGNGLKSDSKSKRRNGSNPETAAIK 125
           MLCFG+KEEDQE PQL F SRQRS   CSDSSS SSGNGLK + K KRRNGSNPETAAIK
Sbjct: 1   MLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGSNPETAAIK 60

Query: 126 AASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQV 185
            ASKK KP+APCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQV
Sbjct: 61  EASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQV 120

Query: 186 QVLCSPYLQQSQLISSETASGKR----EGDLRSRGLYLIPVDCSLHLANCTVADFWSPAM 245
           QVLCSPYLQ+SQL+SS++A+GK     EGDL+SRGL LIPVDCSLHLANCTVADFWSPAM
Sbjct: 121 QVLCSPYLQKSQLLSSQSATGKENGETEGDLKSRGLCLIPVDCSLHLANCTVADFWSPAM 180

Query: 246 AMGKK 247
           AMGKK
Sbjct: 181 AMGKK 185

[Close]

BLAST of Lcy08g001660 vs. NCBI nr
Match: KAG6571939.1 (Transcription factor basic helix-loop-helix 113, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011627.1 Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.0 bits (754), Expect = 5.9e-76
Identity = 173/256 (67.58%), Postives = 189/256 (73.83%), Query Frame = 0


Query: 1   MAENQSFDGDELGPTTTTATTFSQLLFAADHDDDDHRDDLEKR---HHQIFNYSVSGSSS 60
           MAENQS   D   P T  ATTFSQLLF+ADHD+DD   D++K    HHQIF YSV  SSS
Sbjct: 1   MAENQSSGRD---PKTAAATTFSQLLFSADHDEDDD-IDVDKHHHVHHQIFEYSV--SSS 60

Query: 61  FAIENPPKMLCFGSKEEDQEQPQLVFNSRQRSGRTCSDSSSASSGNGLKSDSKSKRRNGS 120
           FAIENPPKMLCFG+K+E QE PQL      RS   CSDS               KR+NGS
Sbjct: 61  FAIENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGS 120

Query: 121 NPETAAIK-------AASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180
           NPET AIK        ASKK KP+APCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV
Sbjct: 121 NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180

Query: 181 LHEAMGYIKFLHEQVQVLCSPYLQQSQLISSETASGKREGDLRSRGLYLIPVDCSLHLAN 240
           LHEAMGYIKFLHEQ+QVL SPYL ++QL      +G  EG+L+ RGL LIPV+CSLHLAN
Sbjct: 181 LHEAMGYIKFLHEQIQVLYSPYLDKNQL---GGGNGDTEGELKGRGLCLIPVECSLHLAN 228

Query: 241 CTVADFWSPAMAMGKK 247
           CTVADFWSPAMAMG+K
Sbjct: 241 CTVADFWSPAMAMGRK 228

[Close]

BLAST of Lcy08g001660 vs. TAIR 10
Match: AT3G19500.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30
Identity = 97/242 (40.08%), Postives = 131/242 (54.13%), Query Frame = 0


Query: 20  TTFSQLLFAADHDDDDHRDDLEKRHHQIFNYSVSGSSS----FAIENPPKMLCFGSKEED 79
           T+FS+LL  +D       D     H    N    G  S    F+ +   +MLCF    ++
Sbjct: 20  TSFSELLMFSDGVLSSSSD-----HQPEGNVGDGGEDSLGFVFSGKTGSRMLCFSGGYQN 79

Query: 80  QEQPQLVFNSRQRSGRT----------CSDSSSASS-GNGLKSDSKSKRRNGSNPETAAI 139
            ++   +  S   SG +          C +S+ A +     KS +K +   G+  E+   
Sbjct: 80  DDESLFLEPSVPTSGVSDLDPSCIKIDCRNSNDACTVDKSTKSSTKKRTGTGNGQESDQN 139

Query: 140 KAASKKIKPD-APCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLH 199
           +   KK K +    S G AK RKE+LGERI ALQQLVSP+GKTD ASVLHEAMGYIKFL 
Sbjct: 140 RKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQ 199

Query: 200 EQVQVLCSPYLQQSQL----ISSETASGKREGDLRSRGLYLIPVDCSLHLANCTVADFWS 241
           +Q+QVLCSPYL    L    ++ +  +  +  DLRSRGL L+PV  ++H+ N   ADFWS
Sbjct: 200 DQIQVLCSPYLINHSLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTVHVENSNGADFWS 256

[Close]

BLAST of Lcy08g001660 vs. TAIR 10
Match: AT3G20640.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 6.5e-25
Identity = 67/139 (48.20%), Postives = 84/139 (60.43%), Query Frame = 0


Query: 107 SDSKSKRRNGSNPETAAIKAASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTD 166
           S S   +R G++ + AA     K+ K +A   +   KRKEK+G+RI ALQQLVSPFGKTD
Sbjct: 314 SSSNEVKRGGNDHQPAA-----KRAKSEAASPSPAFKRKEKMGDRIAALQQLVSPFGKTD 373

Query: 167 TASVLHEAMGYIKFLHEQVQVLCSPY------LQQSQLISSETASGKREGDLRSRGLYLI 226
            ASVL EA+ YIKFLH+QV  L +PY      LQ  Q   S       E DLRSRGL L+
Sbjct: 374 AASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHSTELEVSEEPDLRSRGLCLV 433

Query: 227 PVDCSLHLANCTVADFWSP 240
           PV  +  + + T  DFW+P
Sbjct: 434 PVSSTFPVTHDTTVDFWTP 447

[Close]

BLAST of Lcy08g001660 vs. TAIR 10
Match: AT1G49830.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24
Identity = 77/190 (40.53%), Postives = 105/190 (55.26%), Query Frame = 0


Query: 58  FAIENPPKMLCFGSKEEDQEQPQLVFNSRQRS-GRTCSDSSSASSGNGLKSDSKSKRRNG 117
           F   + P+MLCFG    +Q    L+F+    S     S  ++A   N     S  K  + 
Sbjct: 39  FTGNDAPQMLCFGG--GNQNDTDLLFSQPSFSPASPLSSRNNACVVNDQSFRSNKKTGSA 98

Query: 118 SNPETAAIKAASKKIKPD-APCSAGHAK-RKEKLGERITALQQLVSPFGKTDTASVLHEA 177
              +        K+ K D    S G+AK +KEK+GE+IT LQ LVSP+GKTD ASVLHE 
Sbjct: 99  DGHDRVCDPKPGKRCKRDQKKSSLGNAKVKKEKVGEKITTLQHLVSPYGKTDAASVLHET 158

Query: 178 MGYIKFLHEQVQVLCSPYLQQSQLISSETAS---GKREGDLRSRGLYLIPVDCSLHLANC 237
           MGYIKFL +QVQVL +PY + + L   +T       +  +LRS GL L+P+  ++H+AN 
Sbjct: 159 MGYIKFLQDQVQVLSTPYFKHNPLDDEDTGEVNPTMKVKELRSNGLCLVPLAWTVHVANT 218

Query: 238 TVADFWSPAM 242
             AD WS A+
Sbjct: 219 NGADLWSSAI 226

[Close]

BLAST of Lcy08g001660 vs. TAIR 10
Match: AT1G61660.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-22
Identity = 65/144 (45.14%), Postives = 90/144 (62.50%), Query Frame = 0


Query: 105 LKSDSKSKRRNGSNPETAAIKAASKKIKPDAPCSAGHAK-RKEKLGERITALQQLVSPFG 164
           L+  +K++ ++ S       ++A+KK +   P      K RKE L ++IT+LQQLVSPFG
Sbjct: 239 LEDKTKTRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFG 298

Query: 165 KTDTASVLHEAMGYIKFLHEQVQVLCSPYL------QQSQLIS--SETASGKREGDLRSR 224
           KTDTASVL EA+ YIKFLH+QV VL +PY+      QQ Q IS  S++       +LR  
Sbjct: 299 KTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGH 358

Query: 225 GLYLIPVDCSLHLANCTVADFWSP 240
           GL L+P+  +  +AN T ADFW+P
Sbjct: 359 GLCLVPISSTFPVANETTADFWTP 382

[Close]

BLAST of Lcy08g001660 vs. TAIR 10
Match: AT1G05710.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 4.0e-22
Identity = 56/115 (48.70%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 125 KAASKKIKPDAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQ 184
           +++ K+ K D   S+   +RK+K+GERI+ALQQ+VSP+GKTDTASVL +AM YI+FLHEQ
Sbjct: 22  ESSIKRHKSDLSFSS--KERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQ 81

Query: 185 VQVLCSPYLQQSQLISSETASGKREGDLRSRGLYLIPVDCSLHLANCTVADFWSP 240
           V+VL +PYL   Q +   T     +  LR+RGL L+P++ ++ +A    AD W+P
Sbjct: 82  VKVLSAPYL---QTVPDATQEELEQYSLRNRGLCLVPMENTVGVAQSNGADIWAP 131

The following BLAST results are available for this feature:

BLAST of Lcy08g001660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT67	1.9e-29	40.08	Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=...	[more]
Q8GXT3	9.2e-24	48.20	Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=...	[more]
Q7XJU2	5.6e-21	48.70	Transcription factor bHLH153 OS=Arabidopsis thaliana OX=3702 GN=BHLH153 PE=1 SV=...	[more]
Q94JL3	7.3e-21	46.15	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
Q7XJU1	9.5e-21	55.67	Transcription factor bHLH154 OS=Arabidopsis thaliana OX=3702 GN=BHLH154 PE=1 SV=...	[more]

BLAST of Lcy08g001660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZZ3	2.5e-104	82.14	transcription factor bHLH113 OS=Cucumis melo OX=3656 GN=LOC103495283 PE=4 SV=1	[more]
A0A0A0K7T3	1.8e-102	80.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071650 PE=4 S...	[more]
A0A5D3C900	6.1e-79	85.41	Transcription factor bHLH113 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1I8M4	3.7e-76	65.65	transcription factor bHLH113 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470...	[more]
A0A6J1GL82	1.1e-75	67.19	transcription factor bHLH113 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Lcy08g001660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455002.1	5.1e-104	82.14	PREDICTED: transcription factor bHLH113 [Cucumis melo]	[more]
XP_004137092.1	3.6e-102	80.00	transcription factor bHLH113 [Cucumis sativus] >KGN43876.1 hypothetical protein ...	[more]
XP_038888642.1	7.6e-100	77.95	transcription factor bHLH113-like [Benincasa hispida]	[more]
KAA0031343.1	1.3e-78	85.41	transcription factor bHLH113 [Cucumis melo var. makuwa] >TYK06796.1 transcriptio...	[more]
KAG6571939.1	5.9e-76	67.58	Transcription factor basic helix-loop-helix 113, partial [Cucurbita argyrosperma...	[more]

BLAST of Lcy08g001660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19500.1	1.4e-30	40.08	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G20640.1	6.5e-25	48.20	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G49830.1	1.5e-24	40.53	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.3	1.8e-22	45.14	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05710.1	4.0e-22	48.70	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 141..203 e-value: 2.2E-6 score: 29.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 143..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..143
None	No IPR available	PANTHER	PTHR16223:SF238	TRANSCRIPTION FACTOR BHLH114	coord: 46..231
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 46..231
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 143..188 e-value: 6.75463E-22 score: 83.3847
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 132..181 score: 10.785023

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g001660.1	Lcy08g001660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding