Homology
BLAST of Lcy08g001580 vs. ExPASy Swiss-Prot
Match:
Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)
HSP 1 Score: 356.7 bits (914), Expect = 5.3e-97
Identity = 195/585 (33.33%), Postives = 321/585 (54.87%), Query Frame = 0
Query: 32 SHLRQIHARVFRLLKHQD----NLIVTRLIGHYPPSVGVRVFNQLLRPNIFPCNAIIRVL 91
+HL+QIH + H D NL++ R + +F+ PNIF N++I
Sbjct: 27 NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 92 AEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLKAFHRSSHAPNVKQVHTQVLKMAHLGDS 151
+ +F S+++ L + FTF +LKA R+S +H+ V+K D
Sbjct: 87 VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146
Query: 152 FISSALLGVYARGLKDMDSAHKVFDEMSDREMACCWTSLIAGYAQMGLAEKALQLFVMMI 211
++LL +Y+ G ++ AHK+FDE+ DR + WT+L +GY G +A+ LF M+
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRSVV-TWTALFSGYTTSGRHREAIDLFKKMV 206
Query: 212 EENMQPKDDTMVSVLSACSKFQISEIEKWVAELRQLVNKFDLKSSCCDSINTVLIYLYGK 271
E ++P +V VLSAC + +W+ + + +++ + T L+ LY K
Sbjct: 207 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME-----EMEMQKNSFVRTTLVNLYAK 266
Query: 272 WGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQNGFPVEALTLFRQMVENSHCKPNHVTMV 331
GK+EK++ F+ +++K ++ W++MI Y N FP E + LF QM++ + KP+ ++V
Sbjct: 267 CGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQ-ENLKPDQFSIV 326
Query: 332 TVLSACAQIGDLQLG------CRVHEVLEHGGRTGIVASNKMLATALIDMYCKSGSLEKA 391
LS+CA +G L LG HE L +N +A ALIDMY K G++ +
Sbjct: 327 GFLSSCASLGALDLGEWGISLIDRHEFL----------TNLFMANALIDMYAKCGAMARG 386
Query: 392 KEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQEFNIRPTAGTFISLLCACSHS 451
EVF ++ KD + NA I GLA NG + + +F Q ++ I P TF+ LLC C H+
Sbjct: 387 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 446
Query: 452 GFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVWSS 511
G ++ G + FN ++ Y + ++EHY C +DL RAG+ +DA ++ MP PN VW +
Sbjct: 447 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 506
Query: 512 LLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSLATDFQWDDVSALRWFMREKGV 571
LLSGC L +LA+ V K+L+ ++P N+ YV +N + +WD+ + +R M +KG+
Sbjct: 507 LLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGM 566
Query: 572 HKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELEKQMKLV 607
K PG SWI ++G VHEF + +++P +++Y+ L +L +M+L+
Sbjct: 567 KKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLM 592
BLAST of Lcy08g001580 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 355.5 bits (911), Expect = 1.2e-96
Identity = 207/624 (33.17%), Postives = 342/624 (54.81%), Query Frame = 0
Query: 24 LLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHYPPS------VGVRVFNQLLRPNI 83
L++ ++ L+Q H + R D ++L S +VF+++ +PN
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 84 FPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLS---PNDFTFSFLLKAFHRSSHAPNVKQV 143
F N +IR A S SI+ L +S S PN +TF FL+KA S + +
Sbjct: 96 FAWNTLIRAYA--SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 155
Query: 144 HTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMACCWTSLIAGYAQMG 203
H +K A D F++++L+ Y D+DSA KVF + ++++ W S+I G+ Q G
Sbjct: 156 HGMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVV-SWNSMINGFVQKG 215
Query: 204 LAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEK----WVAELRQLVNKFDLK 263
+KAL+LF M E+++ TMV VLSAC+K + E + ++ E R VN
Sbjct: 216 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL---- 275
Query: 264 SSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDK-------------------------- 323
++ ++ +Y K G IE +K F+ + +K
Sbjct: 276 -----TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 335
Query: 324 ----RSVLVWNSMINAYFQNGFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQ 383
+ ++ WN++I+AY QNG P EAL +F ++ + K N +T+V+ LSACAQ+G L+
Sbjct: 336 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 395
Query: 384 LGCRVHEVLEHGGRTGIVASNKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMI 443
LG +H ++ G + N + +ALI MY K G LEK++EVF+ + +D ++AMI
Sbjct: 396 LGRWIHSYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 455
Query: 444 MGLAVNGEGEEALKLFTQMQEFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLI 503
GLA++G G EA+ +F +MQE N++P TF ++ CACSH+G +++ +F++M ++Y I
Sbjct: 456 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGI 515
Query: 504 LPSLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSK 563
+P +HYAC +D+L R+G E A++ + MP P+ VW +LL C +H+ LA+
Sbjct: 516 VPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT 575
Query: 564 KLVEVDPENSAGYVMQANSLATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFF 605
+L+E++P N +V+ +N A +W++VS LR MR G+ K+PG S I +DG++HEF
Sbjct: 576 RLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFL 635
BLAST of Lcy08g001580 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 352.4 bits (903), Expect = 9.9e-96
Identity = 200/604 (33.11%), Postives = 331/604 (54.80%), Query Frame = 0
Query: 34 LRQIHARVFRLLKHQDNLIVTRLI------GHYPP-SVGVRVFNQLLRPNIFPCNAIIRV 93
LR IHA++ ++ H N +++LI H+ + VF + PN+ N + R
Sbjct: 49 LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108
Query: 94 LAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLKAFHRSSHAPNVKQVHTQVLKMAHLGD 153
A S A ++ + L L PN +TF F+LK+ +S +Q+H VLK+ D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 154 SFISSALLGVYARGLKDMDSAHKVFDEMSDREM--------------------------- 213
++ ++L+ +Y + + ++ AHKVFD+ R++
Sbjct: 169 LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 228
Query: 214 ---ACCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKW 273
W ++I+GYA+ G ++AL+LF M++ N++P + TMV+V+SAC++ E+ +
Sbjct: 229 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR- 288
Query: 274 VAELRQLVNKFDLKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINA 333
++ ++ S+ I LI LY K G++E + F E + + V+ WN++I
Sbjct: 289 --QVHLWIDDHGFGSNL--KIVNALIDLYSKCGELETACGLF-ERLPYKDVISWNTLIGG 348
Query: 334 YFQNGFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTG 393
Y EAL LF++M+ + PN VTM+++L ACA +G + +G +H ++ R
Sbjct: 349 YTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK--RLK 408
Query: 394 IVASNKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLF 453
V + L T+LIDMY K G +E A +VF+ ++ K S+NAMI G A++G + + LF
Sbjct: 409 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 468
Query: 454 TQMQEFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLAR 513
++M++ I+P TF+ LL ACSHSG L+ GR IF MT Y + P LEHY C IDLL
Sbjct: 469 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 528
Query: 514 AGLFEDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQ 573
+GLF++A E+++ M EP+ +W SLL C +H EL + ++ L++++PEN YV+
Sbjct: 529 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 588
Query: 574 ANSLATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTL 601
+N A+ +W++V+ R + +KG+ K PG S I +D +VHEF + +P +Y L
Sbjct: 589 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 642
BLAST of Lcy08g001580 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 337.4 bits (864), Expect = 3.3e-91
Identity = 191/580 (32.93%), Postives = 327/580 (56.38%), Query Frame = 0
Query: 30 NDSHLRQIHARVFRLLKHQDNLIVTRLIGHY----PPSVGVRVFNQLLRPNIFPCNAIIR 89
N + ++Q+HA++ R H+D I +LI ++ VRVFNQ+ PN+ CN++IR
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 90 VLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLKAFHRSSHAPNVKQVHTQVLKMAHLG 149
A++S + AF +F +++ L ++FT+ FLLKA S P VK +H + K+
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150
Query: 150 DSFISSALLGVYAR-GLKDMDSAHKVFDEMSDREMACCWTSLIAGYAQMGLAEKALQLFV 209
D ++ +AL+ Y+R G + A K+F++MS+R+ W S++ G + G A +LF
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD-TVSWNSMLGGLVKAGELRDARRLFD 210
Query: 210 MMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAELRQLVNKFDLKSSCCDSINTV---- 269
M + ++ +TM+ + C R++ F+L + NTV
Sbjct: 211 EMPQRDL-ISWNTMLDGYARC---------------REMSKAFELFEKMPER-NTVSWST 270
Query: 270 LIYLYGKWGKIEKSKEKFNEI-IDKRSVLVWNSMINAYFQNGFPVEALTLFRQMVENSHC 329
++ Y K G +E ++ F+++ + ++V+ W +I Y + G EA L QMV S
Sbjct: 271 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA-SGL 330
Query: 330 KPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVASNKMLATALIDMYCKSGSLE 389
K + ++++L+AC + G L LG R+H +L+ + SN + AL+DMY K G+L+
Sbjct: 331 KFDAAAVISILAACTESGLLSLGMRIHSILKRSN----LGSNAYVLNALLDMYAKCGNLK 390
Query: 390 KAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQEFNIRPTAGTFISLLCACS 449
KA +VF+ + KD +S+N M+ GL V+G G+EA++LF++M+ IRP TFI++LC+C+
Sbjct: 391 KAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN 450
Query: 450 HSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVW 509
H+G +++G F M Y ++P +EHY C +DLL R G ++A++VV TMP EPN +W
Sbjct: 451 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 510
Query: 510 SSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSLATDFQWDDVSALRWFMREK 569
+LL C +H+ ++A+ V LV++DP + Y + +N A W+ V+ +R M+
Sbjct: 511 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSM 570
Query: 570 GVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNEL 600
GV K G S + ++ +HEF +++P +++Y L L
Sbjct: 571 GVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
BLAST of Lcy08g001580 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 336.3 bits (861), Expect = 7.4e-91
Identity = 209/648 (32.25%), Postives = 345/648 (53.24%), Query Frame = 0
Query: 21 LSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHYPP----SVGVRVFNQLLRPN 80
L ++ +++ ++R +HA V + + I RLI Y G +VF+++ + N
Sbjct: 26 LDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRN 85
Query: 81 IFPCNAIIRVLAE-----------------DSCSFH--------------AFSIFKSLKQ 140
I+ N+++ L + D C+++ A F + +
Sbjct: 86 IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145
Query: 141 LSLSPNDFTFSFLLKAFHRSSHAPNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMD 200
N+++F+ +L A + QVH+ + K L D +I SAL+ +Y++ +++
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK-CGNVN 205
Query: 201 SAHKVFDEMSDREMACCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSAC 260
A +VFDEM DR + W SLI + Q G A +AL +F MM+E ++P + T+ SV+SAC
Sbjct: 206 DAQRVFDEMGDRNVV-SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISAC 265
Query: 261 SKFQISEIEKWV-------AELRQ---LVNKF-DLKSSCC---------DSI-------N 320
+ ++ + V +LR L N F D+ + C DS+
Sbjct: 266 ASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAE 325
Query: 321 TVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQNGFPVEALTLFRQMVENSH 380
T +I Y + ++ F ++ + R+V+ WN++I Y QNG EAL+LF + S
Sbjct: 326 TSMISGYAMAASTKAARLMFTKMAE-RNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 385
Query: 381 CKPNHVTMVTVLSACAQIGDLQLGCRVH-EVLEHGGRTGIVASNKM-LATALIDMYCKSG 440
C P H + +L ACA + +L LG + H VL+HG + + + + +LIDMY K G
Sbjct: 386 C-PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 445
Query: 441 SLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQEFNIRPTAGTFISLLC 500
+E+ VF +++ +D +S+NAMI+G A NG G EAL+LF +M E +P T I +L
Sbjct: 446 CVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLS 505
Query: 501 ACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLFEDALEVVSTMPFEPNN 560
AC H+GF+E+GR F+ MT + + P +HY C +DLL RAG E+A ++ MP +P++
Sbjct: 506 ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDS 565
Query: 561 FVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSLATDFQWDDVSALRWFM 605
+W SLL+ C +H L +YV++KL+EV+P NS YV+ +N A +W+DV +R M
Sbjct: 566 VIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 625
BLAST of Lcy08g001580 vs. ExPASy TrEMBL
Match:
A0A6J1GKT0 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454858 PE=4 SV=1)
HSP 1 Score: 1050.0 bits (2714), Expect = 3.7e-303
Identity = 517/608 (85.03%), Postives = 557/608 (91.61%), Query Frame = 0
Query: 1 MVNGKSSAMRSLCINPEPISLSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHY 60
MVNGKS AMRS CIN E I+LSDLLQGRIN S LRQIH RVFRLLKHQDNLI TRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
Query: 61 PPSVGVRVFNQLLRPNIFPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLK 120
P SVG+RVFNQLLRPNIFPCNAIIRVLAE +CSF AFSIFKSLK+LSLSPNDFTFSFLLK
Sbjct: 61 PYSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHAPNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMA 180
AFHRSSH+PNVKQVHT V+KM +LGDSFIS+ALLGVYARGLKDM SAH +FDEMS+REMA
Sbjct: 121 AFHRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
Query: 181 CCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAEL 240
CCWTSLIAGYA MGLAEKAL LFVMMI+EN+QP+DDTMVSVLSACSK QI+EIEKWVAEL
Sbjct: 181 CCWTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
Query: 241 RQLVNKFDLKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQN 300
QLVN+FD SCCDSIN VL+YLYGKWGKIEKS+EKFNEI+DKRS +VWNSMINAYFQN
Sbjct: 241 TQLVNEFD---SCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 300
Query: 301 GFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVAS 360
G PVEALTLFR M+EN HCKPNHVTMVTVLSACAQIGDLQLG RVHE LEHGGR GI+AS
Sbjct: 301 GCPVEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIAS 360
Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQ 420
NKMLATALIDMYCKSGSLEKAK+VFH+LI KD ISFNAMIMGLAVNG+ +EALKLF+QMQ
Sbjct: 361 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 420
Query: 421 EFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLF 480
E +I+PT GTFI LL ACSHSGFLEQGRQIF +M Y PSL+HYACYIDLLARAG
Sbjct: 421 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCV 480
Query: 481 EDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSL 540
EDALEVVSTMPFEPNNFVWSSLL GCLLHSRFELA+YVSKKLVEVDPE+SAGYVMQANS
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSF 540
Query: 541 ATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELE 600
ATD QWDDVSALRWFMREKGVHKQPG+SWIS+DG VHEFFSAT+++PCV+ LYSTL+ELE
Sbjct: 541 ATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLYSTLSELE 600
Query: 601 KQMKLVIP 609
+QMKLVIP
Sbjct: 601 RQMKLVIP 605
BLAST of Lcy08g001580 vs. ExPASy TrEMBL
Match:
A0A5D3C6A4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001060 PE=4 SV=1)
HSP 1 Score: 1047.3 bits (2707), Expect = 2.4e-302
Identity = 519/608 (85.36%), Postives = 555/608 (91.28%), Query Frame = 0
Query: 1 MVNGKSSAMRSLCINPEPISLSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHY 60
M+N KS AMR L +NPE I+LSDLLQGRIN+SHLRQIHARVFRLLKHQDNLI TRLIGHY
Sbjct: 28 MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 87
Query: 61 PPSVGVRVFNQLLRPNIFPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLK 120
P SVG+RVFNQL+RPNIFPCNAIIRVLAE + SF A SIFKSLK LSLSPNDFTFSFLLK
Sbjct: 88 PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 147
Query: 121 AFHRSSHAPNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMA 180
AFHRS +A +VKQVHT VLKM + GDSFIS+ALLGVYARGLKDM SAHKVFDEMSDREMA
Sbjct: 148 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 207
Query: 181 CCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAEL 240
CCWTSLIAGYAQMGLAEKA+ +FV MI+ENMQP+DDTMVSVLSACSKFQI+EIEKWV L
Sbjct: 208 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 267
Query: 241 RQLVNKFDLKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQN 300
R+LVNKFD KSSCCDSIN VLIYLYGKWG +EKS+EKFNEIIDK+SVLVWNSMINAYFQN
Sbjct: 268 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 327
Query: 301 GFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVAS 360
GFPVEALTLFR MVEN HCKPNHVTMVTV+SACAQIGDLQLG VHEVL+ GR GI+AS
Sbjct: 328 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 387
Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQ 420
NKMLATALIDMYCK GSLE+AKEVFHQLI+KD ISFNAMIMGLAVNG+G+EALKLF QMQ
Sbjct: 388 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 447
Query: 421 EFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLF 480
E +IRP+ GTFI LL ACSHSGFLEQG QIF EMT YLI PSLEHYACYIDLLARAG F
Sbjct: 448 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 507
Query: 481 EDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSL 540
EDALEVVSTMPFEPNNFVWSSLL GCLLHS FELAQYVSKKLVEVDPENSAGYVMQANS
Sbjct: 508 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 567
Query: 541 ATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELE 600
A+D QWDDVSALRWFMREKGVHKQPGQSWIS+DG VHEFFSAT+++P V+ LYSTLNEL+
Sbjct: 568 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 627
Query: 601 KQMKLVIP 609
KQ KLVIP
Sbjct: 628 KQTKLVIP 635
BLAST of Lcy08g001580 vs. ExPASy TrEMBL
Match:
A0A1S3BZG8 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495291 PE=4 SV=1)
HSP 1 Score: 1047.3 bits (2707), Expect = 2.4e-302
Identity = 519/608 (85.36%), Postives = 555/608 (91.28%), Query Frame = 0
Query: 1 MVNGKSSAMRSLCINPEPISLSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHY 60
M+N KS AMR L +NPE I+LSDLLQGRIN+SHLRQIHARVFRLLKHQDNLI TRLIGHY
Sbjct: 1 MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 60
Query: 61 PPSVGVRVFNQLLRPNIFPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLK 120
P SVG+RVFNQL+RPNIFPCNAIIRVLAE + SF A SIFKSLK LSLSPNDFTFSFLLK
Sbjct: 61 PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHAPNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMA 180
AFHRS +A +VKQVHT VLKM + GDSFIS+ALLGVYARGLKDM SAHKVFDEMSDREMA
Sbjct: 121 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 180
Query: 181 CCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAEL 240
CCWTSLIAGYAQMGLAEKA+ +FV MI+ENMQP+DDTMVSVLSACSKFQI+EIEKWV L
Sbjct: 181 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 240
Query: 241 RQLVNKFDLKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQN 300
R+LVNKFD KSSCCDSIN VLIYLYGKWG +EKS+EKFNEIIDK+SVLVWNSMINAYFQN
Sbjct: 241 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 300
Query: 301 GFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVAS 360
GFPVEALTLFR MVEN HCKPNHVTMVTV+SACAQIGDLQLG VHEVL+ GR GI+AS
Sbjct: 301 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 360
Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQ 420
NKMLATALIDMYCK GSLE+AKEVFHQLI+KD ISFNAMIMGLAVNG+G+EALKLF QMQ
Sbjct: 361 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 420
Query: 421 EFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLF 480
E +IRP+ GTFI LL ACSHSGFLEQG QIF EMT YLI PSLEHYACYIDLLARAG F
Sbjct: 421 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 480
Query: 481 EDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSL 540
EDALEVVSTMPFEPNNFVWSSLL GCLLHS FELAQYVSKKLVEVDPENSAGYVMQANS
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 540
Query: 541 ATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELE 600
A+D QWDDVSALRWFMREKGVHKQPGQSWIS+DG VHEFFSAT+++P V+ LYSTLNEL+
Sbjct: 541 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 600
Query: 601 KQMKLVIP 609
KQ KLVIP
Sbjct: 601 KQTKLVIP 608
BLAST of Lcy08g001580 vs. ExPASy TrEMBL
Match:
A0A5A7SP64 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001050 PE=4 SV=1)
HSP 1 Score: 1046.2 bits (2704), Expect = 5.3e-302
Identity = 518/608 (85.20%), Postives = 555/608 (91.28%), Query Frame = 0
Query: 1 MVNGKSSAMRSLCINPEPISLSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHY 60
M+N KS AMR L +NPE I+LSDLLQGRIN+SHLRQIHARVFRLLKHQDNLI TRLIGHY
Sbjct: 28 MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 87
Query: 61 PPSVGVRVFNQLLRPNIFPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLK 120
P SVG+RVFNQL+RPNIFPCNAIIRVLAE + SF A SIFKSLK LSLSPNDFTFSFLLK
Sbjct: 88 PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 147
Query: 121 AFHRSSHAPNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMA 180
AFHRS +A +VKQVHT VLKM + GDSFIS+ALLGVYARGLKDM SAHKVFDEMSDREMA
Sbjct: 148 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 207
Query: 181 CCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAEL 240
CCWTSLIAGYAQMGLAEKA+ +FV MI+ENMQP+DDTMVSVLSACSKFQI+EIEKWV L
Sbjct: 208 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 267
Query: 241 RQLVNKFDLKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQN 300
R+LVNKFD KSSCCDSIN VLIYLYGKWG +EKS+EKFNEIIDK+SVLVWNSMINAYFQN
Sbjct: 268 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 327
Query: 301 GFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVAS 360
GFPVEALTLFR MVEN HCKPNHVTMVTV+SACAQIGDLQLG VHEVL+ GR GI+AS
Sbjct: 328 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 387
Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQ 420
NKMLATALID+YCK GSLE+AKEVFHQLI+KD ISFNAMIMGLAVNG+G+EALKLF QMQ
Sbjct: 388 NKMLATALIDLYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 447
Query: 421 EFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLF 480
E +IRP+ GTFI LL ACSHSGFLEQG QIF EMT YLI PSLEHYACYIDLLARAG F
Sbjct: 448 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 507
Query: 481 EDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSL 540
EDALEVVSTMPFEPNNFVWSSLL GCLLHS FELAQYVSKKLVEVDPENSAGYVMQANS
Sbjct: 508 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 567
Query: 541 ATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELE 600
A+D QWDDVSALRWFMREKGVHKQPGQSWIS+DG VHEFFSAT+++P V+ LYSTLNEL+
Sbjct: 568 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 627
Query: 601 KQMKLVIP 609
KQ KLVIP
Sbjct: 628 KQTKLVIP 635
BLAST of Lcy08g001580 vs. ExPASy TrEMBL
Match:
A0A0A0K4I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071580 PE=4 SV=1)
HSP 1 Score: 1042.0 bits (2693), Expect = 1.0e-300
Identity = 509/600 (84.83%), Postives = 550/600 (91.67%), Query Frame = 0
Query: 9 MRSLCINPEPISLSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHYPPSVGVRV 68
MR LC+NPE ISLSDLLQGRIN+SHLRQIHARVFRLLKHQDNLI TRLIGHYP SVG+RV
Sbjct: 1 MRCLCVNPEFISLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHYPHSVGLRV 60
Query: 69 FNQLLRPNIFPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLKAFHRSSHA 128
FNQL+RPNIFPCNAIIRVLAE + SF A SIFK LK LSLSPNDFTFSFLLKAFHRS +A
Sbjct: 61 FNQLIRPNIFPCNAIIRVLAEHNSSFFALSIFKYLKHLSLSPNDFTFSFLLKAFHRSCNA 120
Query: 129 PNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMACCWTSLIA 188
NVKQVHT VLKM + GDSFIS++LLGVYARGLK+M SAHK+FDEMSDREMACCWTSLIA
Sbjct: 121 LNVKQVHTHVLKMGYFGDSFISNSLLGVYARGLKEMASAHKLFDEMSDREMACCWTSLIA 180
Query: 189 GYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAELRQLVNKFD 248
GYAQMGLAEKA+ LF MM++EN+QP+DDT+VSVLSACSK QI+EIEKWV ELRQLVNK D
Sbjct: 181 GYAQMGLAEKAMLLFFMMVKENIQPEDDTIVSVLSACSKLQIAEIEKWVVELRQLVNKCD 240
Query: 249 LKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQNGFPVEALT 308
K SCCDSIN VLIYLYGKWG +EKS+EKFNE++DKRSVLVWNSMINAYFQNGFPVEALT
Sbjct: 241 SKRSCCDSINIVLIYLYGKWGMVEKSEEKFNEVVDKRSVLVWNSMINAYFQNGFPVEALT 300
Query: 309 LFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVASNKMLATAL 368
LFR MVEN HCKPNHVTMVTV+SACAQIGDLQLG VHEVL+ GGR GI+ASNKMLAT+L
Sbjct: 301 LFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRGGRKGIIASNKMLATSL 360
Query: 369 IDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQEFNIRPTA 428
IDMYCK GSLE+AKEVFHQLI+KD I+FNAMIMGLAVN +G+EALKLF QMQE NI P+
Sbjct: 361 IDMYCKCGSLERAKEVFHQLINKDVITFNAMIMGLAVNSKGDEALKLFAQMQEINIIPST 420
Query: 429 GTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLFEDALEVVS 488
GTFI LL ACSHSGFLEQGRQIF EMT HYL+ PSLEHYACYIDLLARAG F+DALEV+S
Sbjct: 421 GTFIGLLSACSHSGFLEQGRQIFIEMTTHYLVSPSLEHYACYIDLLARAGHFDDALEVIS 480
Query: 489 TMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSLATDFQWDD 548
TMPFEPNNFVWSSLL GCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANS ATD QWDD
Sbjct: 481 TMPFEPNNFVWSSLLRGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSFATDLQWDD 540
Query: 549 VSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELEKQMKLVIP 608
VSALRWFMREKGVHKQPGQSWIS+DG VHEFFSAT+++P V+ LY+TLNELEKQMKLVIP
Sbjct: 541 VSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYTTLNELEKQMKLVIP 600
BLAST of Lcy08g001580 vs. NCBI nr
Match:
XP_038888799.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 1065.4 bits (2754), Expect = 1.8e-307
Identity = 528/608 (86.84%), Postives = 562/608 (92.43%), Query Frame = 0
Query: 1 MVNGKSSAMRSLCINPEPISLSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHY 60
MVNGKS AMR+LCINP+ I+LSDLLQGRI++SHLRQIHARVFRLLKHQDNLI TRLIGHY
Sbjct: 19 MVNGKSYAMRALCINPDSINLSDLLQGRISNSHLRQIHARVFRLLKHQDNLIATRLIGHY 78
Query: 61 PPSVGVRVFNQLLRPNIFPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLK 120
P SVG+ VFNQL+RPNIFPCNAIIRVLAE + SF AFSIFKSLK LSLSPNDFTFSFLLK
Sbjct: 79 PHSVGLSVFNQLIRPNIFPCNAIIRVLAEHNSSFLAFSIFKSLKHLSLSPNDFTFSFLLK 138
Query: 121 AFHRSSHAPNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMA 180
AFHRSSHA NVKQVHT VLKM +LGDSFIS+ALLGVYARGLKDM SAHK+FDEMS RE+A
Sbjct: 139 AFHRSSHALNVKQVHTHVLKMGYLGDSFISNALLGVYARGLKDMASAHKLFDEMSGREIA 198
Query: 181 CCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAEL 240
CWTSLIAGYAQMGLAE AL FVMMIEENMQP+DDTMVSVLSACSKF I+EIEKWV EL
Sbjct: 199 -CWTSLIAGYAQMGLAENALLHFVMMIEENMQPEDDTMVSVLSACSKFHIAEIEKWVVEL 258
Query: 241 RQLVNKFDLKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQN 300
RQLVNKFD KSSCCDSIN VLIYLYGKWGKIEKS+EKFNEI+DKRSVLVWNSMINAYFQN
Sbjct: 259 RQLVNKFDPKSSCCDSINIVLIYLYGKWGKIEKSEEKFNEIVDKRSVLVWNSMINAYFQN 318
Query: 301 GFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVAS 360
G PVE LTLFR MVENSHCKPNHVTMVTVLSACA IGDLQLGC VH+ LEHGGR G++AS
Sbjct: 319 GCPVETLTLFRLMVENSHCKPNHVTMVTVLSACALIGDLQLGCWVHDFLEHGGRRGVIAS 378
Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQ 420
NKMLATALIDMYCKSGSLE+AKEVFHQLI+KD ISFNAMIMGLAVNG+G+EALKLF QMQ
Sbjct: 379 NKMLATALIDMYCKSGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 438
Query: 421 EFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLF 480
E +IRPT GTF+SLL ACSHSGFLEQGRQIF EMT Y ILP+LEHYACYIDLLARAG F
Sbjct: 439 EVDIRPTTGTFVSLLSACSHSGFLEQGRQIFIEMTTRYFILPTLEHYACYIDLLARAGHF 498
Query: 481 EDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSL 540
EDALEVVSTMPFEPNN VWSSLL GCLLHS+FELAQYVSKKLVEVDPENSAGYVMQANS
Sbjct: 499 EDALEVVSTMPFEPNNCVWSSLLGGCLLHSKFELAQYVSKKLVEVDPENSAGYVMQANSF 558
Query: 541 ATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELE 600
ATD QWDDVSALRWFMREKGVHKQPGQSWIS+DGIVHEFFSA +++P V+ LY+TLNELE
Sbjct: 559 ATDLQWDDVSALRWFMREKGVHKQPGQSWISIDGIVHEFFSAMKSHPSVDLLYNTLNELE 618
Query: 601 KQMKLVIP 609
KQMKLV+P
Sbjct: 619 KQMKLVLP 625
BLAST of Lcy08g001580 vs. NCBI nr
Match:
XP_022952095.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1050.0 bits (2714), Expect = 7.6e-303
Identity = 517/608 (85.03%), Postives = 557/608 (91.61%), Query Frame = 0
Query: 1 MVNGKSSAMRSLCINPEPISLSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHY 60
MVNGKS AMRS CIN E I+LSDLLQGRIN S LRQIH RVFRLLKHQDNLI TRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINLEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
Query: 61 PPSVGVRVFNQLLRPNIFPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLK 120
P SVG+RVFNQLLRPNIFPCNAIIRVLAE +CSF AFSIFKSLK+LSLSPNDFTFSFLLK
Sbjct: 61 PYSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHAPNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMA 180
AFHRSSH+PNVKQVHT V+KM +LGDSFIS+ALLGVYARGLKDM SAH +FDEMS+REMA
Sbjct: 121 AFHRSSHSPNVKQVHTHVMKMGYLGDSFISNALLGVYARGLKDMGSAHNMFDEMSEREMA 180
Query: 181 CCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAEL 240
CCWTSLIAGYA MGLAEKAL LFVMMI+EN+QP+DDTMVSVLSACSK QI+EIEKWVAEL
Sbjct: 181 CCWTSLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
Query: 241 RQLVNKFDLKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQN 300
QLVN+FD SCCDSIN VL+YLYGKWGKIEKS+EKFNEI+DKRS +VWNSMINAYFQN
Sbjct: 241 TQLVNEFD---SCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 300
Query: 301 GFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVAS 360
G PVEALTLFR M+EN HCKPNHVTMVTVLSACAQIGDLQLG RVHE LEHGGR GI+AS
Sbjct: 301 GCPVEALTLFRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHGGRRGIIAS 360
Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQ 420
NKMLATALIDMYCKSGSLEKAK+VFH+LI KD ISFNAMIMGLAVNG+ +EALKLF+QMQ
Sbjct: 361 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 420
Query: 421 EFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLF 480
E +I+PT GTFI LL ACSHSGFLEQGRQIF +M Y PSL+HYACYIDLLARAG
Sbjct: 421 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCV 480
Query: 481 EDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSL 540
EDALEVVSTMPFEPNNFVWSSLL GCLLHSRFELA+YVSKKLVEVDPE+SAGYVMQANS
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARYVSKKLVEVDPESSAGYVMQANSF 540
Query: 541 ATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELE 600
ATD QWDDVSALRWFMREKGVHKQPG+SWIS+DG VHEFFSAT+++PCV+ LYSTL+ELE
Sbjct: 541 ATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGTVHEFFSATKSHPCVDLLYSTLSELE 600
Query: 601 KQMKLVIP 609
+QMKLVIP
Sbjct: 601 RQMKLVIP 605
BLAST of Lcy08g001580 vs. NCBI nr
Match:
TYK06804.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1047.3 bits (2707), Expect = 4.9e-302
Identity = 519/608 (85.36%), Postives = 555/608 (91.28%), Query Frame = 0
Query: 1 MVNGKSSAMRSLCINPEPISLSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHY 60
M+N KS AMR L +NPE I+LSDLLQGRIN+SHLRQIHARVFRLLKHQDNLI TRLIGHY
Sbjct: 28 MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 87
Query: 61 PPSVGVRVFNQLLRPNIFPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLK 120
P SVG+RVFNQL+RPNIFPCNAIIRVLAE + SF A SIFKSLK LSLSPNDFTFSFLLK
Sbjct: 88 PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 147
Query: 121 AFHRSSHAPNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMA 180
AFHRS +A +VKQVHT VLKM + GDSFIS+ALLGVYARGLKDM SAHKVFDEMSDREMA
Sbjct: 148 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 207
Query: 181 CCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAEL 240
CCWTSLIAGYAQMGLAEKA+ +FV MI+ENMQP+DDTMVSVLSACSKFQI+EIEKWV L
Sbjct: 208 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 267
Query: 241 RQLVNKFDLKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQN 300
R+LVNKFD KSSCCDSIN VLIYLYGKWG +EKS+EKFNEIIDK+SVLVWNSMINAYFQN
Sbjct: 268 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 327
Query: 301 GFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVAS 360
GFPVEALTLFR MVEN HCKPNHVTMVTV+SACAQIGDLQLG VHEVL+ GR GI+AS
Sbjct: 328 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 387
Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQ 420
NKMLATALIDMYCK GSLE+AKEVFHQLI+KD ISFNAMIMGLAVNG+G+EALKLF QMQ
Sbjct: 388 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 447
Query: 421 EFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLF 480
E +IRP+ GTFI LL ACSHSGFLEQG QIF EMT YLI PSLEHYACYIDLLARAG F
Sbjct: 448 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 507
Query: 481 EDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSL 540
EDALEVVSTMPFEPNNFVWSSLL GCLLHS FELAQYVSKKLVEVDPENSAGYVMQANS
Sbjct: 508 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 567
Query: 541 ATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELE 600
A+D QWDDVSALRWFMREKGVHKQPGQSWIS+DG VHEFFSAT+++P V+ LYSTLNEL+
Sbjct: 568 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 627
Query: 601 KQMKLVIP 609
KQ KLVIP
Sbjct: 628 KQTKLVIP 635
BLAST of Lcy08g001580 vs. NCBI nr
Match:
XP_008455016.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo])
HSP 1 Score: 1047.3 bits (2707), Expect = 4.9e-302
Identity = 519/608 (85.36%), Postives = 555/608 (91.28%), Query Frame = 0
Query: 1 MVNGKSSAMRSLCINPEPISLSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHY 60
M+N KS AMR L +NPE I+LSDLLQGRIN+SHLRQIHARVFRLLKHQDNLI TRLIGHY
Sbjct: 1 MINIKSYAMRCLFVNPEFINLSDLLQGRINNSHLRQIHARVFRLLKHQDNLIATRLIGHY 60
Query: 61 PPSVGVRVFNQLLRPNIFPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLK 120
P SVG+RVFNQL+RPNIFPCNAIIRVLAE + SF A SIFKSLK LSLSPNDFTFSFLLK
Sbjct: 61 PHSVGLRVFNQLIRPNIFPCNAIIRVLAEHNTSFLALSIFKSLKHLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHAPNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMA 180
AFHRS +A +VKQVHT VLKM + GDSFIS+ALLGVYARGLKDM SAHKVFDEMSDREMA
Sbjct: 121 AFHRSCNALDVKQVHTHVLKMGYFGDSFISNALLGVYARGLKDMASAHKVFDEMSDREMA 180
Query: 181 CCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAEL 240
CCWTSLIAGYAQMGLAEKA+ +FV MI+ENMQP+DDTMVSVLSACSKFQI+EIEKWV L
Sbjct: 181 CCWTSLIAGYAQMGLAEKAMLIFVTMIKENMQPEDDTMVSVLSACSKFQIAEIEKWVVAL 240
Query: 241 RQLVNKFDLKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQN 300
R+LVNKFD KSSCCDSIN VLIYLYGKWG +EKS+EKFNEIIDK+SVLVWNSMINAYFQN
Sbjct: 241 RELVNKFDSKSSCCDSINIVLIYLYGKWGMVEKSEEKFNEIIDKKSVLVWNSMINAYFQN 300
Query: 301 GFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVAS 360
GFPVEALTLFR MVEN HCKPNHVTMVTV+SACAQIGDLQLG VHEVL+ GR GI+AS
Sbjct: 301 GFPVEALTLFRLMVENPHCKPNHVTMVTVISACAQIGDLQLGSWVHEVLQRSGRKGIIAS 360
Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQ 420
NKMLATALIDMYCK GSLE+AKEVFHQLI+KD ISFNAMIMGLAVNG+G+EALKLF QMQ
Sbjct: 361 NKMLATALIDMYCKCGSLERAKEVFHQLINKDVISFNAMIMGLAVNGKGDEALKLFAQMQ 420
Query: 421 EFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLF 480
E +IRP+ GTFI LL ACSHSGFLEQG QIF EMT YLI PSLEHYACYIDLLARAG F
Sbjct: 421 EIDIRPSTGTFIGLLSACSHSGFLEQGHQIFIEMTTQYLISPSLEHYACYIDLLARAGRF 480
Query: 481 EDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSL 540
EDALEVVSTMPFEPNNFVWSSLL GCLLHS FELAQYVSKKLVEVDPENSAGYVMQANS
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSSFELAQYVSKKLVEVDPENSAGYVMQANSF 540
Query: 541 ATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELE 600
A+D QWDDVSALRWFMREKGVHKQPGQSWIS+DG VHEFFSAT+++P V+ LYSTLNEL+
Sbjct: 541 ASDRQWDDVSALRWFMREKGVHKQPGQSWISIDGTVHEFFSATKSHPYVDLLYSTLNELD 600
Query: 601 KQMKLVIP 609
KQ KLVIP
Sbjct: 601 KQTKLVIP 608
BLAST of Lcy08g001580 vs. NCBI nr
Match:
KAG6571934.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1047.0 bits (2706), Expect = 6.5e-302
Identity = 514/608 (84.54%), Postives = 556/608 (91.45%), Query Frame = 0
Query: 1 MVNGKSSAMRSLCINPEPISLSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHY 60
MVNGKS AMRS CINPE I+LSDLLQGRIN S LRQIH RVFRLLKHQDNLI TRLIGHY
Sbjct: 1 MVNGKSYAMRSSCINPEFINLSDLLQGRINSSRLRQIHGRVFRLLKHQDNLIATRLIGHY 60
Query: 61 PPSVGVRVFNQLLRPNIFPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLK 120
P SVG+RVFNQLLRPNIFPCNAIIRVLAE +CSF AFSIFKSLK+LSLSPNDFTFSFLLK
Sbjct: 61 PHSVGIRVFNQLLRPNIFPCNAIIRVLAESNCSFLAFSIFKSLKRLSLSPNDFTFSFLLK 120
Query: 121 AFHRSSHAPNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMA 180
AFHRSSH+PNVKQVHT VLKM +LGDSFIS+ALLGVYA+GLKDM SAH +FDEMS+REMA
Sbjct: 121 AFHRSSHSPNVKQVHTHVLKMGYLGDSFISNALLGVYAKGLKDMGSAHNMFDEMSEREMA 180
Query: 181 CCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAEL 240
CCWT LIAGYA MGLAEKAL LFVMMI+EN+QP+DDTMVSVLSACSK QI+EIEKWVAEL
Sbjct: 181 CCWTPLIAGYAHMGLAEKALLLFVMMIKENIQPEDDTMVSVLSACSKLQIAEIEKWVAEL 240
Query: 241 RQLVNKFDLKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQN 300
QLVN+FD SCCDSIN VL+YLYGKWGKIEKS+EKFNEI+DKRS +VWNSMINAYFQN
Sbjct: 241 TQLVNEFD---SCCDSINIVLVYLYGKWGKIEKSEEKFNEIVDKRSAIVWNSMINAYFQN 300
Query: 301 GFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVAS 360
G PVEALTL+R M+EN HCKPNHVTMVTVLSACAQIGDLQLG RVHE LEH GR GI+AS
Sbjct: 301 GCPVEALTLYRLMLENPHCKPNHVTMVTVLSACAQIGDLQLGRRVHEALEHSGRKGIIAS 360
Query: 361 NKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQ 420
NKMLATALIDMYCKSGSLEKAK+VFH+LI KD ISFNAMIMGLAVNG+ +EALKLF+QMQ
Sbjct: 361 NKMLATALIDMYCKSGSLEKAKQVFHELICKDVISFNAMIMGLAVNGKADEALKLFSQMQ 420
Query: 421 EFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLF 480
E +I+PT GTFI LL ACSHSGFLEQGRQIF +M Y PSL+HYACYIDLLARAG
Sbjct: 421 ESDIKPTTGTFIGLLSACSHSGFLEQGRQIFIQMATRYSTSPSLDHYACYIDLLARAGCV 480
Query: 481 EDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSL 540
EDALEVVSTMPFEPNNFVWSSLL GCLLHSRFELA++VSKKLVEVDPE+SAGYVMQANS
Sbjct: 481 EDALEVVSTMPFEPNNFVWSSLLRGCLLHSRFELARHVSKKLVEVDPESSAGYVMQANSF 540
Query: 541 ATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELE 600
ATD QWDDVSALRWFMREKGVHKQPG+SWIS+DGIVHEFFSAT+++PCV+ LYSTL+ELE
Sbjct: 541 ATDLQWDDVSALRWFMREKGVHKQPGRSWISIDGIVHEFFSATKSHPCVDLLYSTLSELE 600
Query: 601 KQMKLVIP 609
+QMKL IP
Sbjct: 601 RQMKLAIP 605
BLAST of Lcy08g001580 vs. TAIR 10
Match:
AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 356.7 bits (914), Expect = 3.7e-98
Identity = 195/585 (33.33%), Postives = 321/585 (54.87%), Query Frame = 0
Query: 32 SHLRQIHARVFRLLKHQD----NLIVTRLIGHYPPSVGVRVFNQLLRPNIFPCNAIIRVL 91
+HL+QIH + H D NL++ R + +F+ PNIF N++I
Sbjct: 27 NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 92 AEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLKAFHRSSHAPNVKQVHTQVLKMAHLGDS 151
+ +F S+++ L + FTF +LKA R+S +H+ V+K D
Sbjct: 87 VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146
Query: 152 FISSALLGVYARGLKDMDSAHKVFDEMSDREMACCWTSLIAGYAQMGLAEKALQLFVMMI 211
++LL +Y+ G ++ AHK+FDE+ DR + WT+L +GY G +A+ LF M+
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRSVV-TWTALFSGYTTSGRHREAIDLFKKMV 206
Query: 212 EENMQPKDDTMVSVLSACSKFQISEIEKWVAELRQLVNKFDLKSSCCDSINTVLIYLYGK 271
E ++P +V VLSAC + +W+ + + +++ + T L+ LY K
Sbjct: 207 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME-----EMEMQKNSFVRTTLVNLYAK 266
Query: 272 WGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQNGFPVEALTLFRQMVENSHCKPNHVTMV 331
GK+EK++ F+ +++K ++ W++MI Y N FP E + LF QM++ + KP+ ++V
Sbjct: 267 CGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQ-ENLKPDQFSIV 326
Query: 332 TVLSACAQIGDLQLG------CRVHEVLEHGGRTGIVASNKMLATALIDMYCKSGSLEKA 391
LS+CA +G L LG HE L +N +A ALIDMY K G++ +
Sbjct: 327 GFLSSCASLGALDLGEWGISLIDRHEFL----------TNLFMANALIDMYAKCGAMARG 386
Query: 392 KEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQEFNIRPTAGTFISLLCACSHS 451
EVF ++ KD + NA I GLA NG + + +F Q ++ I P TF+ LLC C H+
Sbjct: 387 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 446
Query: 452 GFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVWSS 511
G ++ G + FN ++ Y + ++EHY C +DL RAG+ +DA ++ MP PN VW +
Sbjct: 447 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 506
Query: 512 LLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSLATDFQWDDVSALRWFMREKGV 571
LLSGC L +LA+ V K+L+ ++P N+ YV +N + +WD+ + +R M +KG+
Sbjct: 507 LLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGM 566
Query: 572 HKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNELEKQMKLV 607
K PG SWI ++G VHEF + +++P +++Y+ L +L +M+L+
Sbjct: 567 KKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLM 592
BLAST of Lcy08g001580 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 355.5 bits (911), Expect = 8.3e-98
Identity = 207/624 (33.17%), Postives = 342/624 (54.81%), Query Frame = 0
Query: 24 LLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHYPPS------VGVRVFNQLLRPNI 83
L++ ++ L+Q H + R D ++L S +VF+++ +PN
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 84 FPCNAIIRVLAEDSCSFHAFSIFKSLKQLSLS---PNDFTFSFLLKAFHRSSHAPNVKQV 143
F N +IR A S SI+ L +S S PN +TF FL+KA S + +
Sbjct: 96 FAWNTLIRAYA--SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 155
Query: 144 HTQVLKMAHLGDSFISSALLGVYARGLKDMDSAHKVFDEMSDREMACCWTSLIAGYAQMG 203
H +K A D F++++L+ Y D+DSA KVF + ++++ W S+I G+ Q G
Sbjct: 156 HGMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEKDVV-SWNSMINGFVQKG 215
Query: 204 LAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEK----WVAELRQLVNKFDLK 263
+KAL+LF M E+++ TMV VLSAC+K + E + ++ E R VN
Sbjct: 216 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL---- 275
Query: 264 SSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDK-------------------------- 323
++ ++ +Y K G IE +K F+ + +K
Sbjct: 276 -----TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 335
Query: 324 ----RSVLVWNSMINAYFQNGFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQ 383
+ ++ WN++I+AY QNG P EAL +F ++ + K N +T+V+ LSACAQ+G L+
Sbjct: 336 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 395
Query: 384 LGCRVHEVLEHGGRTGIVASNKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMI 443
LG +H ++ G + N + +ALI MY K G LEK++EVF+ + +D ++AMI
Sbjct: 396 LGRWIHSYIKKHG----IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 455
Query: 444 MGLAVNGEGEEALKLFTQMQEFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLI 503
GLA++G G EA+ +F +MQE N++P TF ++ CACSH+G +++ +F++M ++Y I
Sbjct: 456 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGI 515
Query: 504 LPSLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSK 563
+P +HYAC +D+L R+G E A++ + MP P+ VW +LL C +H+ LA+
Sbjct: 516 VPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT 575
Query: 564 KLVEVDPENSAGYVMQANSLATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFF 605
+L+E++P N +V+ +N A +W++VS LR MR G+ K+PG S I +DG++HEF
Sbjct: 576 RLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFL 635
BLAST of Lcy08g001580 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 352.4 bits (903), Expect = 7.1e-97
Identity = 200/604 (33.11%), Postives = 331/604 (54.80%), Query Frame = 0
Query: 34 LRQIHARVFRLLKHQDNLIVTRLI------GHYPP-SVGVRVFNQLLRPNIFPCNAIIRV 93
LR IHA++ ++ H N +++LI H+ + VF + PN+ N + R
Sbjct: 49 LRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108
Query: 94 LAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLKAFHRSSHAPNVKQVHTQVLKMAHLGD 153
A S A ++ + L L PN +TF F+LK+ +S +Q+H VLK+ D
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 154 SFISSALLGVYARGLKDMDSAHKVFDEMSDREM--------------------------- 213
++ ++L+ +Y + + ++ AHKVFD+ R++
Sbjct: 169 LYVHTSLISMYVQNGR-LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 228
Query: 214 ---ACCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSACSKFQISEIEKW 273
W ++I+GYA+ G ++AL+LF M++ N++P + TMV+V+SAC++ E+ +
Sbjct: 229 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR- 288
Query: 274 VAELRQLVNKFDLKSSCCDSINTVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINA 333
++ ++ S+ I LI LY K G++E + F E + + V+ WN++I
Sbjct: 289 --QVHLWIDDHGFGSNL--KIVNALIDLYSKCGELETACGLF-ERLPYKDVISWNTLIGG 348
Query: 334 YFQNGFPVEALTLFRQMVENSHCKPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTG 393
Y EAL LF++M+ + PN VTM+++L ACA +G + +G +H ++ R
Sbjct: 349 YTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK--RLK 408
Query: 394 IVASNKMLATALIDMYCKSGSLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLF 453
V + L T+LIDMY K G +E A +VF+ ++ K S+NAMI G A++G + + LF
Sbjct: 409 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 468
Query: 454 TQMQEFNIRPTAGTFISLLCACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLAR 513
++M++ I+P TF+ LL ACSHSG L+ GR IF MT Y + P LEHY C IDLL
Sbjct: 469 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 528
Query: 514 AGLFEDALEVVSTMPFEPNNFVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQ 573
+GLF++A E+++ M EP+ +W SLL C +H EL + ++ L++++PEN YV+
Sbjct: 529 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 588
Query: 574 ANSLATDFQWDDVSALRWFMREKGVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTL 601
+N A+ +W++V+ R + +KG+ K PG S I +D +VHEF + +P +Y L
Sbjct: 589 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 642
BLAST of Lcy08g001580 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 337.4 bits (864), Expect = 2.3e-92
Identity = 191/580 (32.93%), Postives = 327/580 (56.38%), Query Frame = 0
Query: 30 NDSHLRQIHARVFRLLKHQDNLIVTRLIGHY----PPSVGVRVFNQLLRPNIFPCNAIIR 89
N + ++Q+HA++ R H+D I +LI ++ VRVFNQ+ PN+ CN++IR
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 90 VLAEDSCSFHAFSIFKSLKQLSLSPNDFTFSFLLKAFHRSSHAPNVKQVHTQVLKMAHLG 149
A++S + AF +F +++ L ++FT+ FLLKA S P VK +H + K+
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150
Query: 150 DSFISSALLGVYAR-GLKDMDSAHKVFDEMSDREMACCWTSLIAGYAQMGLAEKALQLFV 209
D ++ +AL+ Y+R G + A K+F++MS+R+ W S++ G + G A +LF
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD-TVSWNSMLGGLVKAGELRDARRLFD 210
Query: 210 MMIEENMQPKDDTMVSVLSACSKFQISEIEKWVAELRQLVNKFDLKSSCCDSINTV---- 269
M + ++ +TM+ + C R++ F+L + NTV
Sbjct: 211 EMPQRDL-ISWNTMLDGYARC---------------REMSKAFELFEKMPER-NTVSWST 270
Query: 270 LIYLYGKWGKIEKSKEKFNEI-IDKRSVLVWNSMINAYFQNGFPVEALTLFRQMVENSHC 329
++ Y K G +E ++ F+++ + ++V+ W +I Y + G EA L QMV S
Sbjct: 271 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA-SGL 330
Query: 330 KPNHVTMVTVLSACAQIGDLQLGCRVHEVLEHGGRTGIVASNKMLATALIDMYCKSGSLE 389
K + ++++L+AC + G L LG R+H +L+ + SN + AL+DMY K G+L+
Sbjct: 331 KFDAAAVISILAACTESGLLSLGMRIHSILKRSN----LGSNAYVLNALLDMYAKCGNLK 390
Query: 390 KAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQEFNIRPTAGTFISLLCACS 449
KA +VF+ + KD +S+N M+ GL V+G G+EA++LF++M+ IRP TFI++LC+C+
Sbjct: 391 KAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN 450
Query: 450 HSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLFEDALEVVSTMPFEPNNFVW 509
H+G +++G F M Y ++P +EHY C +DLL R G ++A++VV TMP EPN +W
Sbjct: 451 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 510
Query: 510 SSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSLATDFQWDDVSALRWFMREK 569
+LL C +H+ ++A+ V LV++DP + Y + +N A W+ V+ +R M+
Sbjct: 511 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSM 570
Query: 570 GVHKQPGQSWISVDGIVHEFFSATRANPCVNRLYSTLNEL 600
GV K G S + ++ +HEF +++P +++Y L L
Sbjct: 571 GVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
BLAST of Lcy08g001580 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 336.3 bits (861), Expect = 5.2e-92
Identity = 209/648 (32.25%), Postives = 345/648 (53.24%), Query Frame = 0
Query: 21 LSDLLQGRINDSHLRQIHARVFRLLKHQDNLIVTRLIGHYPP----SVGVRVFNQLLRPN 80
L ++ +++ ++R +HA V + + I RLI Y G +VF+++ + N
Sbjct: 26 LDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRN 85
Query: 81 IFPCNAIIRVLAE-----------------DSCSFH--------------AFSIFKSLKQ 140
I+ N+++ L + D C+++ A F + +
Sbjct: 86 IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145
Query: 141 LSLSPNDFTFSFLLKAFHRSSHAPNVKQVHTQVLKMAHLGDSFISSALLGVYARGLKDMD 200
N+++F+ +L A + QVH+ + K L D +I SAL+ +Y++ +++
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK-CGNVN 205
Query: 201 SAHKVFDEMSDREMACCWTSLIAGYAQMGLAEKALQLFVMMIEENMQPKDDTMVSVLSAC 260
A +VFDEM DR + W SLI + Q G A +AL +F MM+E ++P + T+ SV+SAC
Sbjct: 206 DAQRVFDEMGDRNVV-SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISAC 265
Query: 261 SKFQISEIEKWV-------AELRQ---LVNKF-DLKSSCC---------DSI-------N 320
+ ++ + V +LR L N F D+ + C DS+
Sbjct: 266 ASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAE 325
Query: 321 TVLIYLYGKWGKIEKSKEKFNEIIDKRSVLVWNSMINAYFQNGFPVEALTLFRQMVENSH 380
T +I Y + ++ F ++ + R+V+ WN++I Y QNG EAL+LF + S
Sbjct: 326 TSMISGYAMAASTKAARLMFTKMAE-RNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 385
Query: 381 CKPNHVTMVTVLSACAQIGDLQLGCRVH-EVLEHGGRTGIVASNKM-LATALIDMYCKSG 440
C P H + +L ACA + +L LG + H VL+HG + + + + +LIDMY K G
Sbjct: 386 C-PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 445
Query: 441 SLEKAKEVFHQLISKDAISFNAMIMGLAVNGEGEEALKLFTQMQEFNIRPTAGTFISLLC 500
+E+ VF +++ +D +S+NAMI+G A NG G EAL+LF +M E +P T I +L
Sbjct: 446 CVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLS 505
Query: 501 ACSHSGFLEQGRQIFNEMTAHYLILPSLEHYACYIDLLARAGLFEDALEVVSTMPFEPNN 560
AC H+GF+E+GR F+ MT + + P +HY C +DLL RAG E+A ++ MP +P++
Sbjct: 506 ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDS 565
Query: 561 FVWSSLLSGCLLHSRFELAQYVSKKLVEVDPENSAGYVMQANSLATDFQWDDVSALRWFM 605
+W SLL+ C +H L +YV++KL+EV+P NS YV+ +N A +W+DV +R M
Sbjct: 566 VIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 625
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9SR82 | 5.3e-97 | 33.33 | Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... | [more] |
| O82380 | 1.2e-96 | 33.17 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
| Q9LN01 | 9.9e-96 | 33.11 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
| Q9LS72 | 3.3e-91 | 32.93 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
| Q9SIT7 | 7.4e-91 | 32.25 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1GKT0 | 3.7e-303 | 85.03 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
| A0A5D3C6A4 | 2.4e-302 | 85.36 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3BZG8 | 2.4e-302 | 85.36 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
| A0A5A7SP64 | 5.3e-302 | 85.20 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A0A0K4I3 | 1.0e-300 | 84.83 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071580 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038888799.1 | 1.8e-307 | 86.84 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benin... | [more] |
| XP_022952095.1 | 7.6e-303 | 85.03 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
| TYK06804.1 | 4.9e-302 | 85.36 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
| XP_008455016.1 | 4.9e-302 | 85.36 | PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-... | [more] |
| KAG6571934.1 | 6.5e-302 | 84.54 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G08820.1 | 3.7e-98 | 33.33 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT2G29760.1 | 8.3e-98 | 33.17 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G08070.1 | 7.1e-97 | 33.11 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G29230.1 | 2.3e-92 | 32.93 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G13600.1 | 5.2e-92 | 32.25 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
