Lcy08g001500 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g001500
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING-type domain-containing protein
Location	Chr08: 2071737 .. 2074260 (+)
RNA-Seq Expression	Lcy08g001500
Synteny	Lcy08g001500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAAATAATCTGTCTTATCTAAAAAAGAAAATCTATTCACCTGTTGAGTTCCAATCCAAGCTCGAGTTTTTCCTTTCTCTTCGTCTTCGTTCAATCTGTCTCGTAGCGAAAGTAACCCAGAATTCCTCCTCAACATCCTGCAACTTCCGTCGACATTTCTTCGAAATTTCAGCTCTGCTGCTTCCCAGTTTAAAACCCTTTCCAATTCTCGCGCTTCCTTCTCCTTTCCTTTATTGTAAATCCTTCTTCAGTTTCAGATTATACGCAAAAATTGAGTGAAAGAGGCATCGGAGCAGCCGAGTCTGTGTATGACGAGCGCTTCGGAGCTGTTTCATAGTCGGAGGTATCGGTTGGGTCGCACCGACGCGGATTTAGGGCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGGCGTCATCATGGTCACAACGGCAGTCACCGCCGCGATTTGAACGCCTGTGGCGCTTTCCGACGCTCCTCGCTGCAAGAACGCCGTCAATCTCCCCGGTTTTTGAACCCTGTAAGGATAAACTTTACCCAATTCTGGGTTTGTGTTGCTTTATCGCGTGCGATGTTTTCCTTGTTGTATATACTTGGGAAATTGTTTTGGCTGCGACGAATTCTATATTGATGGGGGTTGATAGCAGTTGGAGTTGGAAGAACTGTTCAGATTTTGTTTTGATTAGGAATTTTAAGCGGTGGAATTTTTCTGACCTAATAGTTAACTGTATTATCGGTTGGGAATATGTTGAAAAGATCGAATTTGCCCTAATTTATCAGCTTAAGTTGTTGTGATGATTTAACAATAACTCCCAGCTGTTAATTTAGTGATGCTTTCATTCTTCAGTGTTAATGCTGTTTTCTATTATCCATGGTGACCACCTACCTTGGATTTAATATCCTAGCAACCAAATGGAGTAGGGTCGGACACTCACGGATATAAAAAAAAAAAAAGAAAGGTGGTTTTCCTATTGCTGTGAAATCCTTAGAACCAGAATAAATCAAGTAACAGAACTTGGTACTCAAAGTGATGATGGAAAAAGTTTTCCCAATTTTATTAGCTTTTTAATGCTACTTGGCTATGAAACTATGATTTAATTGGTGTATGATCATGGAGACATAACCTGTATTTTATTTTCTGGGTTGTCATCTCGGTCTGAAAGTTGAACTCAATTAGTATGGAGGCATTAACACTCTATATCTTCATTGTAGCTTGCTGTAGATCGATCGCCTGCTCAGTCCGATTCAGGTACAAGCATTGGTTCCAGGAATAACATTAATGCAAGTACTCGGAACGGCTCGAGGATTGGGCTAAGTGAGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGAGGTGCCTCTTCACCGACGAGCAGGTCAGTTGCTAGTTTCATGTGCTTGTTGTTTACACTACTATGCAGAAAAATTTTAGGCTTCAATAGGAATATTCCATGTAATTTCTCCTAGAGACAATCTTTGTAACTATTGACGCGTCTTGAATGTGTCTATGGCATTGATCCAATTCCCATAAACTCTACAATTGTTACTGGTTGGTTGGTCATCCATAAACTCCGAGCTATCCGGTTTCATCTTAATGTCGTAGACTTCAACATTCTCTAAAAATGATATATATGGATAGCAAATTGGACTCTACAATTGTTACTGGTTGATCATCTATAAGTTGAATGGAATAGATCCCTGCTCTGTGTTAATAGAACTAGTTCATTTATCAGGAATGGTCTTGTTGAAGCATTGGATTCAGAAACCTCGACAAGTCGATCACAGAGGATATCCCTTGTTGATGCTGACAGGTTGCGATTGGTTCCTGCAGTCAGCAAGAGGCCCCCTGGTCTCTCACAGGAGGCAATCGACCGCTTACAACTCGAGGTTTTTATCAATACAGAGCATATCATTGACGATGACCCGACAACGACAACAACATCAAATGACTGTAGTATATGTCTAGAGACTTTTATAGATGGAGACAAACTCATACGTTTGCCCTGTGAGCACAAATTTCACCATGCTTGCTTGGACCGATGGATTCGAACTTGTGGGGAATGTCCATATTGTCGACAACATATCGCTGTTAACTGACGTTTTCTAACTCGTTTCGCAACTTGGGATTTCTTGTAGCTAGGAAGCTTAGAGACTTGACAACCATTCCAAGTTGGGTATTAATCTTTATAGTTATTGTTGATGTATGATGTCCATACTTGTATCCTTCTAAGATCTGTGTTGAGACAAAATTGTGTGGCAATTTTAATAGCCAAGATGTGTGTAGGATCCTATATAGTGTGATGGTACAATGGAATTGACTGCTTTGTGATTCTTTTTCTTGGTTTTAGTTATTGAGAAAAGGAACACTATGATTTTTTTTTTTTTTTGGTACAAAGAGAATGAGAAAGCAGCCTTGTATATATACATTCTAATTAAAAAATATGTTCAAATACCCGTGAACTATGAGATTGGTTTCATTTATATCCCT

mRNA sequence

AAACAAATAATCTGTCTTATCTAAAAAAGAAAATCTATTCACCTGTTGAGTTCCAATCCAAGCTCGAGTTTTTCCTTTCTCTTCGTCTTCGTTCAATCTGTCTCGTAGCGAAAGTAACCCAGAATTCCTCCTCAACATCCTGCAACTTCCGTCGACATTTCTTCGAAATTTCAGCTCTGCTGCTTCCCAGTTTAAAACCCTTTCCAATTCTCGCGCTTCCTTCTCCTTTCCTTTATTGTAAATCCTTCTTCAGTTTCAGATTATACGCAAAAATTGAGTGAAAGAGGCATCGGAGCAGCCGAGTCTGTGTATGACGAGCGCTTCGGAGCTGTTTCATAGTCGGAGGTATCGGTTGGGTCGCACCGACGCGGATTTAGGGCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGGCGTCATCATGGTCACAACGGCAGTCACCGCCGCGATTTGAACGCCTGTGGCGCTTTCCGACGCTCCTCGCTGCAAGAACGCCGTCAATCTCCCCGGTTTTTGAACCCTCTTGCTGTAGATCGATCGCCTGCTCAGTCCGATTCAGGTACAAGCATTGGTTCCAGGAATAACATTAATGCAAGTACTCGGAACGGCTCGAGGATTGGGCTAAGTGAGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGAGGTGCCTCTTCACCGACGAGCAGGAATGGTCTTGTTGAAGCATTGGATTCAGAAACCTCGACAAGTCGATCACAGAGGATATCCCTTGTTGATGCTGACAGGTTGCGATTGGTTCCTGCAGTCAGCAAGAGGCCCCCTGGTCTCTCACAGGAGGCAATCGACCGCTTACAACTCGAGGTTTTTATCAATACAGAGCATATCATTGACGATGACCCGACAACGACAACAACATCAAATGACTGTAGTATATGTCTAGAGACTTTTATAGATGGAGACAAACTCATACGTTTGCCCTGTGAGCACAAATTTCACCATGCTTGCTTGGACCGATGGATTCGAACTTGTGGGGAATGTCCATATTGTCGACAACATATCGCTGTTAACTGACGTTTTCTAACTCGTTTCGCAACTTGGGATTTCTTGTAGCTAGGAAGCTTAGAGACTTGACAACCATTCCAAGTTGGGTATTAATCTTTATAGTTATTGTTGATGTATGATGTCCATACTTGTATCCTTCTAAGATCTGTGTTGAGACAAAATTGTGTGGCAATTTTAATAGCCAAGATGTGTGTAGGATCCTATATAGTGTGATGGTACAATGGAATTGACTGCTTTGTGATTCTTTTTCTTGGTTTTAGTTATTGAGAAAAGGAACACTATGATTTTTTTTTTTTTTTGGTACAAAGAGAATGAGAAAGCAGCCTTGTATATATACATTCTAATTAAAAAATATGTTCAAATACCCGTGAACTATGAGATTGGTTTCATTTATATCCCT

Coding sequence (CDS)

ATGACGAGCGCTTCGGAGCTGTTTCATAGTCGGAGGTATCGGTTGGGTCGCACCGACGCGGATTTAGGGCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGGCGTCATCATGGTCACAACGGCAGTCACCGCCGCGATTTGAACGCCTGTGGCGCTTTCCGACGCTCCTCGCTGCAAGAACGCCGTCAATCTCCCCGGTTTTTGAACCCTCTTGCTGTAGATCGATCGCCTGCTCAGTCCGATTCAGGTACAAGCATTGGTTCCAGGAATAACATTAATGCAAGTACTCGGAACGGCTCGAGGATTGGGCTAAGTGAGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGAGGTGCCTCTTCACCGACGAGCAGGAATGGTCTTGTTGAAGCATTGGATTCAGAAACCTCGACAAGTCGATCACAGAGGATATCCCTTGTTGATGCTGACAGGTTGCGATTGGTTCCTGCAGTCAGCAAGAGGCCCCCTGGTCTCTCACAGGAGGCAATCGACCGCTTACAACTCGAGGTTTTTATCAATACAGAGCATATCATTGACGATGACCCGACAACGACAACAACATCAAATGACTGTAGTATATGTCTAGAGACTTTTATAGATGGAGACAAACTCATACGTTTGCCCTGTGAGCACAAATTTCACCATGCTTGCTTGGACCGATGGATTCGAACTTGTGGGGAATGTCCATATTGTCGACAACATATCGCTGTTAACTGA

Protein sequence

MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGSHRRDLNACGAFRRSSLQERRQSPRFLNPLAVDRSPAQSDSGTSIGSRNNINASTRNGSRIGLSEDSRLPGSVLLARERLLERLRGASSPTSRNGLVEALDSETSTSRSQRISLVDADRLRLVPAVSKRPPGLSQEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLDRWIRTCGECPYCRQHIAVN

Homology

[Close]

BLAST of Lcy08g001500 vs. ExPASy Swiss-Prot
Match: Q852U6 (Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RHY1A PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.4e-37
Identity = 104/264 (39.39%), Postives = 145/264 (54.92%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHG-HNGSHRRDLNACGAFRRS 60
           MTSASELF +RR R GR+D  L  D+     H  +  R HG H+ + R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLQERRQSPRFLNPLAVDRSPAQSDSGTS-IGSRNNINASTRNGSRIGLSEDSRLPGSVL 120
           + + RR    F +P+     P +   GTS   + ++ +  T++ S + L+   RLPG+VL
Sbjct: 61  TPRLRR---FFHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLLERLRGAS-SPTSRNGLVEALDSETSTSRSQRISLVDAD------RLRLVPAVS 180
           LAR+RL ERLRG S S  SR+  V   D   S+  S     +D D       L++    +
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRVSLDDQRESSFHS-----IDGDPIFQLAGLQVTYECN 180

Query: 181 KRPPGLSQEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHK 240
           K+P GL+Q+AI+ L  + F + E          +   DCSICLE+F  GD LI LPC H 
Sbjct: 181 KKPQGLTQDAINCLHRQTFSSAE--------VKSEMRDCSICLESFTKGDMLISLPCTHS 240

Query: 241 FHHACLDRWIRTCGECPYCRQHIA 256
           FH +CL+ W+R CG+CP CR+ IA
Sbjct: 241 FHSSCLNPWLRACGDCPCCRRAIA 248

[Close]

BLAST of Lcy08g001500 vs. ExPASy Swiss-Prot
Match: A5WWA0 (E3 ubiquitin-protein ligase znrf3 OS=Danio rerio OX=7955 GN=znrf3 PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 3.5e-10
Identity = 24/55 (43.64%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 200 DPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLDRWIRTCGECPYCRQHI 255
           D  ++++++DC+ICLE +IDG++L  +PC H+FH  C+D W+     CP+CR +I
Sbjct: 257 DSVSSSSTSDCAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNI 311

[Close]

BLAST of Lcy08g001500 vs. ExPASy Swiss-Prot
Match: Q9ULT6 (E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens OX=9606 GN=ZNRF3 PE=1 SV=3)

HSP 1 Score: 67.0 bits (162), Expect = 3.5e-10
Identity = 24/55 (43.64%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 200 DPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLDRWIRTCGECPYCRQHI 255
           D  ++++++DC+ICLE +IDG++L  +PC H+FH  C+D W+     CP+CR +I
Sbjct: 283 DTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 337

[Close]

BLAST of Lcy08g001500 vs. ExPASy Swiss-Prot
Match: Q08D68 (E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis OX=8364 GN=znrf3 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.6e-10
Identity = 24/55 (43.64%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 200 DPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLDRWIRTCGECPYCRQHI 255
           D  ++++++DC+ICLE +IDG++L  +PC H+FH  C+D W+     CP+CR +I
Sbjct: 256 DTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNI 310

[Close]

BLAST of Lcy08g001500 vs. ExPASy Swiss-Prot
Match: Q641J8 (E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis OX=8355 GN=rnf12-a PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.0e-10
Identity = 30/84 (35.71%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 173 RPPGLSQEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKF 232
           +P GL++E ID L      +T +  ++D   T     CS+C+  + +G+KL +LPC H++
Sbjct: 542 QPRGLTKEQIDNL------STRNFGENDALKT-----CSVCITEYTEGNKLRKLPCSHEY 601

Query: 233 HHACLDRWIRTCGECPYCRQHIAV 257
           H  C+DRW+     CP CR+ + V
Sbjct: 602 HIHCIDRWLSENSTCPICRRAVLV 614

[Close]

BLAST of Lcy08g001500 vs. ExPASy TrEMBL
Match: A0A6J1JIJ3 (probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita maxima OX=3661 GN=LOC111486117 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.1e-118
Identity = 222/259 (85.71%), Postives = 233/259 (89.96%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGSHRRDLNACGAFRRSS 60
           MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNG+HRR LNACGAFRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFLNPLAVDRSPAQSDSGTSIGSRNNINASTRNGSRIGLSEDSRLPGSVLLA 120
           LQER QSPRFLNPLAVDRSPAQS+SG S+GSRNNINA+ +N  R GLS DSRLPGSVLLA
Sbjct: 61  LQERHQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNGLVEALD--SETSTSRSQRISLVDADRLRLVPAVSKRPPGLS 180
           RERL ERLRGASSPT RNGLVEALD   E S SRSQ ISL DADRLRLVPAVSKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLD 240
            EAI+ LQLE FI+ EHIIDDD T TTTSNDCSICL++FIDGDKLI LPC+HKFHHACL+
Sbjct: 181 LEAINCLQLERFIDIEHIIDDDLTMTTTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIAVN 258
            WIRTCGECPYCRQHI VN
Sbjct: 241 PWIRTCGECPYCRQHIVVN 259

[Close]

BLAST of Lcy08g001500 vs. ExPASy TrEMBL
Match: A0A0A0K6D2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071510 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.5e-115
Identity = 213/259 (82.24%), Postives = 231/259 (89.19%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGSHRRDLNACGAFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDRHLQYQRRHHGHNG+HRRDLN+CG FRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFLNPLAVDRSPAQSDSGTSIGSRNNINASTRNGSRIGLSEDSRLPGSVLLA 120
           LQERRQSPRF NPL+VDRSPAQSDS TS+ SRNNIN +T+N  R GLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNGLVEALDS--ETSTSRSQRISLVDADRLRLVPAVSKRPPGLS 180
           RERLLERLRGASSPT+RN LVEA +   ET+TSRSQRISLVDADR+RLV   SKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLD 240
           Q+AI+RLQLEVFINT+HII+D    T TS DCSICLE+F DGDKLI LPCEHKFHH CLD
Sbjct: 181 QDAINRLQLEVFINTDHIINDG-VMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240

Query: 241 RWIRTCGECPYCRQHIAVN 258
           RWIRTCGECPYCRQHIA+N
Sbjct: 241 RWIRTCGECPYCRQHIAIN 258

[Close]

BLAST of Lcy08g001500 vs. ExPASy TrEMBL
Match: A0A6J1EQ66 (probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita moschata OX=3662 GN=LOC111434663 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 9.3e-115
Identity = 218/260 (83.85%), Postives = 233/260 (89.62%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGSHRRDLNACGAFRRSS 60
           MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNG+HRR LNACGAFRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFLNPLAVDRSPAQSDSGTSIGSRNNINASTRNGSRIGLSEDSRLPGSVLLA 120
           LQERRQSPRFL+PLAVDRSPAQS+SG S+GSRNNI+A+ +N  R GL+ DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFLDPLAVDRSPAQSESGISVGSRNNISANIQNSLRPGLNGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNGLVEALD--SETSTSRSQRISLVDADRLRLVPAVSKRPPGLS 180
           RERL ERLRGASSPT RNGLVEALD   E S SRSQ ISL DADRLRLVPAVSKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QEAIDRLQLEVFINTE-HIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACL 240
           QEAI+ LQLE FI+ E HIIDDD T   TSNDCSICL++FIDGDKLI LPC+HKFHHACL
Sbjct: 181 QEAINCLQLERFIDIEQHIIDDDLTMIRTSNDCSICLDSFIDGDKLIHLPCKHKFHHACL 240

Query: 241 DRWIRTCGECPYCRQHIAVN 258
           ++WIRTCGECPYCRQ I VN
Sbjct: 241 EQWIRTCGECPYCRQRIVVN 260

[Close]

BLAST of Lcy08g001500 vs. ExPASy TrEMBL
Match: A0A5A7SMR0 (E3 ubiquitin-protein ligase RLIM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001110 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.3e-113
Identity = 212/257 (82.49%), Postives = 229/257 (89.11%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGSHRRDLNACGAFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDR+LQYQRRHHGHN +HRRDLN+CG FRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFLNPLAVDRSPAQSDSGTSIGSRNNINASTRNGSRIGLSEDSRLPGSVLLA 120
           LQERRQSPRF NPL+VDRSPAQSDS TS+GSRNNIN +T+N  R GLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNGLVEALDS--ETSTSRSQRISLVDADRLRLVPAVSKRPPGLS 180
           RERLLERLRGASSPTSRN LVEA +   E STSRSQRISL+DADR+RLV   SKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLD 240
           Q+AI+RLQLEVFINT+ IIDDD   T TS DCSICLE+F DGDKLI LPCEHKFHHACLD
Sbjct: 181 QDAINRLQLEVFINTDRIIDDD-VMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLD 240

Query: 241 RWIRTCGECPYCRQHIA 256
           RWIRTCGECPYCRQHI+
Sbjct: 241 RWIRTCGECPYCRQHIS 256

[Close]

BLAST of Lcy08g001500 vs. ExPASy TrEMBL
Match: A0A1S3C156 (E3 ubiquitin-protein ligase RLIM OS=Cucumis melo OX=3656 GN=LOC103495299 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.3e-113
Identity = 212/257 (82.49%), Postives = 229/257 (89.11%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGSHRRDLNACGAFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDR+LQYQRRHHGHN +HRRDLN+CG FRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFLNPLAVDRSPAQSDSGTSIGSRNNINASTRNGSRIGLSEDSRLPGSVLLA 120
           LQERRQSPRF NPL+VDRSPAQSDS TS+GSRNNIN +T+N  R GLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNGLVEALDS--ETSTSRSQRISLVDADRLRLVPAVSKRPPGLS 180
           RERLLERLRGASSPTSRN LVEA +   E STSRSQRISL+DADR+RLV   SKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLD 240
           Q+AI+RLQLEVFINT+ IIDDD   T TS DCSICLE+F DGDKLI LPCEHKFHHACLD
Sbjct: 181 QDAINRLQLEVFINTDRIIDDD-VMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLD 240

Query: 241 RWIRTCGECPYCRQHIA 256
           RWIRTCGECPYCRQHI+
Sbjct: 241 RWIRTCGECPYCRQHIS 256

[Close]

BLAST of Lcy08g001500 vs. NCBI nr
Match: XP_038888994.1 (probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida])

HSP 1 Score: 438.0 bits (1125), Expect = 5.8e-119
Identity = 219/259 (84.56%), Postives = 234/259 (90.35%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGSHRRDLNACGAFRRSS 60
           MTSASELF+SRRYRLGRTDADLGLDSEPPDR+LQYQRRHHGHN +HRRD N+CG FRRSS
Sbjct: 1   MTSASELFYSRRYRLGRTDADLGLDSEPPDRYLQYQRRHHGHNANHRRDFNSCGTFRRSS 60

Query: 61  LQERRQSPRFLNPLAVDRSPAQSDSGTSIGSRNNINASTRNGSRIGLSEDSRLPGSVLLA 120
           LQERRQSPRF NPL+VDR P QSDS TS GSRNNIN +T+N  R GLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRLPTQSDSVTSDGSRNNINPNTQNSLRTGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNGLVEALDS--ETSTSRSQRISLVDADRLRLVPAVSKRPPGLS 180
           RERLLERLRGASSP SRN LVEALD   E ST+RSQRISLVDADR++LVPA SKRPPGLS
Sbjct: 121 RERLLERLRGASSPRSRNALVEALDGSPEISTNRSQRISLVDADRMQLVPAPSKRPPGLS 180

Query: 181 QEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLD 240
           Q+AIDRLQLEVFINTEHIIDDD TTTTTSN+CSICLE+F DGD LI LPCEHKFHHACLD
Sbjct: 181 QDAIDRLQLEVFINTEHIIDDDVTTTTTSNECSICLESFTDGDVLIHLPCEHKFHHACLD 240

Query: 241 RWIRTCGECPYCRQHIAVN 258
           RWIRTCGECPYCRQH+ +N
Sbjct: 241 RWIRTCGECPYCRQHVVIN 259

[Close]

BLAST of Lcy08g001500 vs. NCBI nr
Match: XP_022988901.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita maxima])

HSP 1 Score: 434.5 bits (1116), Expect = 6.4e-118
Identity = 222/259 (85.71%), Postives = 233/259 (89.96%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGSHRRDLNACGAFRRSS 60
           MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNG+HRR LNACGAFRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFLNPLAVDRSPAQSDSGTSIGSRNNINASTRNGSRIGLSEDSRLPGSVLLA 120
           LQER QSPRFLNPLAVDRSPAQS+SG S+GSRNNINA+ +N  R GLS DSRLPGSVLLA
Sbjct: 61  LQERHQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNGLVEALD--SETSTSRSQRISLVDADRLRLVPAVSKRPPGLS 180
           RERL ERLRGASSPT RNGLVEALD   E S SRSQ ISL DADRLRLVPAVSKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLD 240
            EAI+ LQLE FI+ EHIIDDD T TTTSNDCSICL++FIDGDKLI LPC+HKFHHACL+
Sbjct: 181 LEAINCLQLERFIDIEHIIDDDLTMTTTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIAVN 258
            WIRTCGECPYCRQHI VN
Sbjct: 241 PWIRTCGECPYCRQHIVVN 259

[Close]

BLAST of Lcy08g001500 vs. NCBI nr
Match: XP_023529438.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 432.6 bits (1111), Expect = 2.4e-117
Identity = 221/259 (85.33%), Postives = 233/259 (89.96%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGSHRRDLNACGAFRRSS 60
           MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNG+HRR LNACGAFRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFLNPLAVDRSPAQSDSGTSIGSRNNINASTRNGSRIGLSEDSRLPGSVLLA 120
           LQERRQSPRFLNPLAVDRSPAQS+SG S+GSRNNINA+ +N  R GLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFLNPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNGLVEALD--SETSTSRSQRISLVDADRLRLVPAVSKRPPGLS 180
           RERL ERLRGASSPT RNGLVEALD   E S SRSQ ISL DADRLRLVPAVSKRPPGLS
Sbjct: 121 RERLFERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLD 240
           QEAI+ LQLE FI+ EHIIDDD T   TSNDCSICL++FIDGDKLI LPC+HKFHHACL+
Sbjct: 181 QEAINCLQLERFIDIEHIIDDDLTMIRTSNDCSICLDSFIDGDKLIHLPCKHKFHHACLE 240

Query: 241 RWIRTCGECPYCRQHIAVN 258
           +WIRTCGECPYCRQ I VN
Sbjct: 241 QWIRTCGECPYCRQRIVVN 259

[Close]

BLAST of Lcy08g001500 vs. NCBI nr
Match: KAG6588706.1 (putative E3 ubiquitin-protein ligase RHY1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 426.8 bits (1096), Expect = 1.3e-115
Identity = 220/260 (84.62%), Postives = 234/260 (90.00%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGSHRRDLNACGAFRRSS 60
           MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQ+QRRHHGHNG+HRR LNACGAFRRSS
Sbjct: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQFQRRHHGHNGNHRRVLNACGAFRRSS 60

Query: 61  LQERRQSPRFLNPLAVDRSPAQSDSGTSIGSRNNINASTRNGSRIGLSEDSRLPGSVLLA 120
           LQERRQSPRFL+PLAVDRSPAQS+SG S+GSRNNINA+ +N  R GLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFLDPLAVDRSPAQSESGISVGSRNNINANIQNSLRPGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNGLVEALD--SETSTSRSQRISLVDADRLRLVPAVSKRPPGLS 180
           RERLLERLRGASSPT RNGLVEALD   E S SRSQ ISL DADRLRLVPAVSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTIRNGLVEALDWSPEISASRSQMISLEDADRLRLVPAVSKRPPGLS 180

Query: 181 QEAIDRLQLEVFINTE-HIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACL 240
           QEAI+ LQLE FI+ E HIIDDD T   TSNDCSICL++FIDGDKLI LPC+HKFHHACL
Sbjct: 181 QEAINCLQLERFIDIEQHIIDDDSTMIRTSNDCSICLDSFIDGDKLIHLPCKHKFHHACL 240

Query: 241 DRWIRTCGECPYCRQHIAVN 258
           ++WIRTCGECPYCRQ I VN
Sbjct: 241 EQWIRTCGECPYCRQRIVVN 260

[Close]

BLAST of Lcy08g001500 vs. NCBI nr
Match: XP_004136947.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN43862.1 hypothetical protein Csa_017364 [Cucumis sativus])

HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114
Identity = 213/259 (82.24%), Postives = 231/259 (89.19%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHGHNGSHRRDLNACGAFRRSS 60
           MTSASELF+ RRYR GRTD+DLGLDSEPPDRHLQYQRRHHGHNG+HRRDLN+CG FRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFLNPLAVDRSPAQSDSGTSIGSRNNINASTRNGSRIGLSEDSRLPGSVLLA 120
           LQERRQSPRF NPL+VDRSPAQSDS TS+ SRNNIN +T+N  R GLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTSRNGLVEALDS--ETSTSRSQRISLVDADRLRLVPAVSKRPPGLS 180
           RERLLERLRGASSPT+RN LVEA +   ET+TSRSQRISLVDADR+RLV   SKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLD 240
           Q+AI+RLQLEVFINT+HII+D    T TS DCSICLE+F DGDKLI LPCEHKFHH CLD
Sbjct: 181 QDAINRLQLEVFINTDHIINDG-VMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLD 240

Query: 241 RWIRTCGECPYCRQHIAVN 258
           RWIRTCGECPYCRQHIA+N
Sbjct: 241 RWIRTCGECPYCRQHIAIN 258

[Close]

BLAST of Lcy08g001500 vs. TAIR 10
Match: AT1G49850.1 (RING/U-box superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.1e-38
Identity = 104/264 (39.39%), Postives = 145/264 (54.92%), Query Frame = 0


Query: 1   MTSASELFHSRRYRLGRTDADLGLDSEPPDRHLQYQRRHHG-HNGSHRRDLNACGAFRRS 60
           MTSASELF +RR R GR+D  L  D+     H  +  R HG H+ + R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLQERRQSPRFLNPLAVDRSPAQSDSGTS-IGSRNNINASTRNGSRIGLSEDSRLPGSVL 120
           + + RR    F +P+     P +   GTS   + ++ +  T++ S + L+   RLPG+VL
Sbjct: 61  TPRLRR---FFHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLLERLRGAS-SPTSRNGLVEALDSETSTSRSQRISLVDAD------RLRLVPAVS 180
           LAR+RL ERLRG S S  SR+  V   D   S+  S     +D D       L++    +
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRVSLDDQRESSFHS-----IDGDPIFQLAGLQVTYECN 180

Query: 181 KRPPGLSQEAIDRLQLEVFINTEHIIDDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHK 240
           K+P GL+Q+AI+ L  + F + E          +   DCSICLE+F  GD LI LPC H 
Sbjct: 181 KKPQGLTQDAINCLHRQTFSSAE--------VKSEMRDCSICLESFTKGDMLISLPCTHS 240

Query: 241 FHHACLDRWIRTCGECPYCRQHIA 256
           FH +CL+ W+R CG+CP CR+ IA
Sbjct: 241 FHSSCLNPWLRACGDCPCCRRAIA 248

[Close]

BLAST of Lcy08g001500 vs. TAIR 10
Match: AT5G55970.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-10
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 198 DDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLDRWIRTCGECPYCRQHI 255
           D D  T T   +C ICL  + D +++ +LPC HKFH  C+D+W+R    CP C+Q +
Sbjct: 285 DSDSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341

[Close]

BLAST of Lcy08g001500 vs. TAIR 10
Match: AT5G55970.2 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-10
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0


Query: 198 DDDPTTTTTSNDCSICLETFIDGDKLIRLPCEHKFHHACLDRWIRTCGECPYCRQHI 255
           D D  T T   +C ICL  + D +++ +LPC HKFH  C+D+W+R    CP C+Q +
Sbjct: 285 DSDSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341

[Close]

BLAST of Lcy08g001500 vs. TAIR 10
Match: AT2G15580.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 4.7e-10
Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 209 DCSICLETFIDGDKLIRLPCEHKFHHACLDRWIRTCGECPYCRQHI 255
           DC+ICL+ F  G+ L+ LPC HKFH  CL  W+ T   CPYCR  I
Sbjct: 149 DCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194

[Close]

BLAST of Lcy08g001500 vs. TAIR 10
Match: AT1G74620.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 22/52 (42.31%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 204 TTTSNDCSICLETFIDGDKLI-RLPCEHKFHHACLDRWIRTCGECPYCRQHI 255
           TT  N C+IC+E +I+G  ++ +LPC+H+FH  C+++W++    CP CR  I
Sbjct: 177 TTEENGCAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSI 228

The following BLAST results are available for this feature:

BLAST of Lcy08g001500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q852U6	4.4e-37	39.39	Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
A5WWA0	3.5e-10	43.64	E3 ubiquitin-protein ligase znrf3 OS=Danio rerio OX=7955 GN=znrf3 PE=1 SV=2	[more]
Q9ULT6	3.5e-10	43.64	E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens OX=9606 GN=ZNRF3 PE=1 SV=3	[more]
Q08D68	4.6e-10	43.64	E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis OX=8364 GN=znrf3 PE=1 SV...	[more]
Q641J8	6.0e-10	35.71	E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis OX=8355 GN=rnf12-a PE=1 SV...	[more]

BLAST of Lcy08g001500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JIJ3	3.1e-118	85.71	probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0K6D2	5.5e-115	82.24	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071510 P...	[more]
A0A6J1EQ66	9.3e-115	83.85	probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A5A7SMR0	1.3e-113	82.49	E3 ubiquitin-protein ligase RLIM OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C156	1.3e-113	82.49	E3 ubiquitin-protein ligase RLIM OS=Cucumis melo OX=3656 GN=LOC103495299 PE=4 SV...	[more]

BLAST of Lcy08g001500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888994.1	5.8e-119	84.56	probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida]	[more]
XP_022988901.1	6.4e-118	85.71	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita maxima]	[more]
XP_023529438.1	2.4e-117	85.33	probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo]	[more]
KAG6588706.1	1.3e-115	84.62	putative E3 ubiquitin-protein ligase RHY1A, partial [Cucurbita argyrosperma subs...	[more]
XP_004136947.1	1.1e-114	82.24	probable E3 ubiquitin-protein ligase RHY1A [Cucumis sativus] >KGN43862.1 hypothe...	[more]

BLAST of Lcy08g001500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49850.1	3.1e-38	39.39	RING/U-box superfamily protein	[more]
AT5G55970.1	1.2e-10	42.11	RING/U-box superfamily protein	[more]
AT5G55970.2	1.2e-10	42.11	RING/U-box superfamily protein	[more]
AT2G15580.1	4.7e-10	54.35	RING/U-box superfamily protein	[more]
AT1G74620.1	1.4e-09	42.31	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 210..250 e-value: 4.1E-6 score: 36.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 208..251 e-value: 3.7E-13 score: 49.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 210..251 score: 12.902362
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 167..256 e-value: 4.3E-20 score: 73.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..106
None	No IPR available	PANTHER	PTHR45931:SF10	E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED	coord: 146..256
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 146..256
None	No IPR available	PANTHER	PTHR45931:SF10	E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED	coord: 1..138
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 1..138
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 209..251 e-value: 2.2299E-16 score: 68.8677
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 193..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g001500.1	Lcy08g001500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0061630	ubiquitin protein ligase activity