Lcy08g001490 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAATTAAGCTGTTTGGCTTCGGATTTTCCCGGAAAGTTTTCTGAATTTTCTTTCTCAGAAAGTGCTTCTGTGTTTCATTTTATGGCAAGGGCTTGTACGGCTGTTCAAGCAAATGCATCATTGTTTCTTAGGTAAAATTATGTTGCCTTTTTATTTTTTTATTATTATTATATATTTTTTTTGCTTTAAAGTTCAATTCTTGTGTTTTTTTAATGTTATAATTTAGTTCCTGTTTGATAACTATTTGGTTTTTGAAAATTAAGTTTATACACACGTATTTTCACCTATAAGTTTCTTGGTTTTAGTAGCAATCTTCTAACTTGTTTCCAAAAACCAAGTCCAATTTTGGAAAAAAAAAAGTAAAGTAATTTTCAAAAACTTGTTTTTGTTTTTAAAATTTGACTAAGAATTCAAATGCAACCTTAACTATGATGAAAACCATGATACGGAATTTAAGAGAAAACAAGCATAATTTTCAAAAGCTTGTTATCGAACGAGGGCTTTAGTTTCTTTGTGTTTTTATTGGCTTAGGAAAAGTCTATAAGAGAAAGTGGTTGTGGAAATTAAAAGTACTCTATGAGTAAGAGAAAGTGGTTGTGGAAATAAAAAAGGATGTAAGAAAGTGGTTGGGAAGAAAGTAGATGAGAAAGTTGTATCTTTTTTTTTTTTCTTCTTCTTTTTTTAACATTGTTTATCATTTTCTTTCACCACGTAAATATGATTAAGATATGTATGTTGGTAGTGCTTTTAGGGTTACTAGAATAACTTTTTCAATGAGAAGTAGTTTTAATTTCACCCCCCACTTGTTAGGGTTGATATTAATACAAAAAGCGCTTTTTAAAAGCGTTAGAATAGACTTTAAAGTGCTTTATCGGAAATGATTTTAAGAGCACTCTTGGTAATTCTCTCTATACACTATCACTGGAATGTTTATAACTACAAGAGGAAAAAAAAATCTCACTTTGTACATTTTTCTCTCTCTCTTAATTGTCAACATTTTAACGATGGTTTGTAGAAAGATACCTATACACTGTTATGCAACCCAAGTATTGTTCCCATCTTATACTATAGTATAATATGTCACTAGAATCACAATTATTTCTTTTTTCGTTCTTATTGTTTTTAGTTCATATGAGATGAATATTTGAATGTTTGACTTGTTGGTCGAGAATATAATACCTTAACCAGTTGATTTATGATCAGGTTGACACTATGTAACTATTTTTTTTATATTTTTCACAATAAAAGAAATGTGGTAAACTCTCTCTCTCTCCATATATATATATATATAAAGTGGCTTAAACACTACTTTGATCATCATACTTTGGGCTTTCGTTCATTTTAGCCCATACTTTCAAAACATTCATTTTGGTCCTATACTTTTGACTTTGATTCATTCTGGTCATGTATTTTTTAAAAGTAACGACTTTAGTCCCTATTTCCAAAATTTAAGCCTAAATTTGATACACAATGAAAAACCTTTAATACAAATTACATGATTCCATTCATTAAGTGAAATGTCAAGTTAAAATTATGATCGAAAAGGTGAGACAAAAATGAAAATAAATAGACCAAGTTGATCCATTTTTAAAAGTAAGAGACCAAAATGAACCAAAGTCAAAAGTATAGAGATCAAATTGGACGTTTCGAAAGAAAACTACCAGACCAAAATATATTTAAACCTAAAAGAAATCCATTTACACATTGAAGTTGAAGGCTTAAAAATGAGTTGTTTTGTTGCAGGAAAGTGAAGCAATTGAGGCGCCAATTGAGCAGCTTTGCAATGGAGTCCACAGCCAAAGAAGCCCCACATGATCAAAAAGATGAGACAGAAACAGAGCCACTGCCCTACAACTCATCCACTTGGGTGCCCCATCCTCGCACTGGAATCTACTTCCCTCAGGGCCATGAGTGGGTCATGAAGGACGTCCCTGAAAATGCAGCTTCCTTCTCTCGGCTTTGCTGGTTCCGGGACTCCGATGGCGTCGACGACCTCCACCCCGACTCCGACCCCTCTCCCGGGCCTCGGTTCGCCGCTGTTTTCGGCGCCCGGGATTGACCATGGCCAATGGATGAAGATGGAGAGAACAGAGTGTTGTTTAAGAGTACTTGAGAGTTGAGATTTGTAGATAATTAAAGAGGAAGTTTGGAGTTGGAAGGGAGGTTTGGCCAATGACCAAATTGGCCTTACTTGGAATAATGTAATGATCACCCACATCTGGGTTGATTGTAAATATTGGCTTATAATAAAGTGAGGAGAAATAGTAATTTAGAAATTAAATATAAATACTAAGAATCTATCAAAATACTCAAATTAATTCAAGACAATATTAGAATGACAAAGTCATGAGTGTATAACGTTATATAATGTTTATTTTCTCTCTGTTAAAGTCATGTGAGTTCGATACGTCTTCATTTAATATGGTATGTATATG AGAATTAAGCTGTTTGGCTTCGGATTTTCCCGGAAAGTTTTCTGAATTTTCTTTCTCAGAAAGTGCTTCTGTGTTTCATTTTATGGCAAGGGCTTGTACGGCTGTTCAAGCAAATGCATCATTGTTTCTTAGGAAAGTGAAGCAATTGAGGCGCCAATTGAGCAGCTTTGCAATGGAGTCCACAGCCAAAGAAGCCCCACATGATCAAAAAGATGAGACAGAAACAGAGCCACTGCCCTACAACTCATCCACTTGGGTGCCCCATCCTCGCACTGGAATCTACTTCCCTCAGGGCCATGAGTGGGTCATGAAGGACGTCCCTGAAAATGCAGCTTCCTTCTCTCGGCTTTGCTGGTTCCGGGACTCCGATGGCGTCGACGACCTCCACCCCGACTCCGACCCCTCTCCCGGGCCTCGGTTCGCCGCTGTTTTCGGCGCCCGGGATTGACCATGGCCAATGGATGAAGATGGAGAGAACAGAGTGTTGTTTAAGAGTACTTGAGAGTTGAGATTTGTAGATAATTAAAGAGGAAGTTTGGAGTTGGAAGGGAGGTTTGGCCAATGACCAAATTGGCCTTACTTGGAATAATGTAATGATCACCCACATCTGGGTTGATTGTAAATATTGGCTTATAATAAAGTGAGGAGAAATAGTAATTTAGAAATTAAATATAAATACTAAGAATCTATCAAAATACTCAAATTAATTCAAGACAATATTAGAATGACAAAGTCATGAGTGTATAACGTTATATAATGTTTATTTTCTCTCTGTTAAAGTCATGTGAGTTCGATACGTCTTCATTTAATATGGTATGTATATG ATGGCAAGGGCTTGTACGGCTGTTCAAGCAAATGCATCATTGTTTCTTAGGAAAGTGAAGCAATTGAGGCGCCAATTGAGCAGCTTTGCAATGGAGTCCACAGCCAAAGAAGCCCCACATGATCAAAAAGATGAGACAGAAACAGAGCCACTGCCCTACAACTCATCCACTTGGGTGCCCCATCCTCGCACTGGAATCTACTTCCCTCAGGGCCATGAGTGGGTCATGAAGGACGTCCCTGAAAATGCAGCTTCCTTCTCTCGGCTTTGCTGGTTCCGGGACTCCGATGGCGTCGACGACCTCCACCCCGACTCCGACCCCTCTCCCGGGCCTCGGTTCGCCGCTGTTTTCGGCGCCCGGGATTGA MARACTAVQANASLFLRKVKQLRRQLSSFAMESTAKEAPHDQKDETETEPLPYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDGVDDLHPDSDPSPGPRFAAVFGARD Homology
BLAST of Lcy08g001490 vs. ExPASy TrEMBL
Match: A0A6J1D3R9 (uncharacterized protein LOC111017332 OS=Momordica charantia OX=3673 GN=LOC111017332 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 5.9e-43 Identity = 89/115 (77.39%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of Lcy08g001490 vs. ExPASy TrEMBL
Match: A0A6J1JN70 (uncharacterized protein LOC111486209 OS=Cucurbita maxima OX=3661 GN=LOC111486209 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 3.0e-39 Identity = 88/116 (75.86%), Postives = 93/116 (80.17%), Query Frame = 0
BLAST of Lcy08g001490 vs. ExPASy TrEMBL
Match: A0A6J1EIT6 (uncharacterized protein LOC111434665 OS=Cucurbita moschata OX=3662 GN=LOC111434665 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.1e-38 Identity = 87/116 (75.00%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of Lcy08g001490 vs. ExPASy TrEMBL
Match: A0A0A0K7S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071500 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.3e-34 Identity = 73/101 (72.28%), Postives = 85/101 (84.16%), Query Frame = 0
BLAST of Lcy08g001490 vs. ExPASy TrEMBL
Match: A0A1S3C0N8 (uncharacterized protein LOC103495298 OS=Cucumis melo OX=3656 GN=LOC103495298 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.8e-34 Identity = 73/108 (67.59%), Postives = 90/108 (83.33%), Query Frame = 0
BLAST of Lcy08g001490 vs. NCBI nr
Match: XP_038887565.1 (uncharacterized protein LOC120077680 [Benincasa hispida]) HSP 1 Score: 195.3 bits (495), Expect = 3.1e-46 Identity = 92/121 (76.03%), Postives = 105/121 (86.78%), Query Frame = 0
BLAST of Lcy08g001490 vs. NCBI nr
Match: XP_022148740.1 (uncharacterized protein LOC111017332 [Momordica charantia]) HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42 Identity = 89/115 (77.39%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of Lcy08g001490 vs. NCBI nr
Match: XP_022989019.1 (uncharacterized protein LOC111486209 [Cucurbita maxima]) HSP 1 Score: 171.0 bits (432), Expect = 6.2e-39 Identity = 88/116 (75.86%), Postives = 93/116 (80.17%), Query Frame = 0
BLAST of Lcy08g001490 vs. NCBI nr
Match: KAG6588707.1 (hypothetical protein SDJN03_17272, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 171.0 bits (432), Expect = 6.2e-39 Identity = 88/116 (75.86%), Postives = 93/116 (80.17%), Query Frame = 0
BLAST of Lcy08g001490 vs. NCBI nr
Match: XP_023531513.1 (uncharacterized protein LOC111793725 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.5 bits (428), Expect = 1.8e-38 Identity = 87/115 (75.65%), Postives = 92/115 (80.00%), Query Frame = 0
BLAST of Lcy08g001490 vs. TAIR 10
Match: AT3G19550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12 Identity = 41/101 (40.59%), Postives = 50/101 (49.50%), Query Frame = 0
BLAST of Lcy08g001490 vs. TAIR 10
Match: AT1G73120.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; EXPRESSED IN: root, cultured cell; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 8.2e-05 Identity = 17/26 (65.38%), Postives = 22/26 (84.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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