Lcy08g000830 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g000830
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CYSTM domain-containing protein
Location	Chr08: 1275662 .. 1276931 (-)
RNA-Seq Expression	Lcy08g000830
Synteny	Lcy08g000830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACCATTTATTTCTTGAGCTTTCTCATAAAGTTTAGTGATTTAAATACACCCTTTGTTCTTCTTCTTCTTTCTTCTCTTGCATTGTTCAAGCTTGTGTTGGAAGAAGATATGAGTGACCCCAAATATGCCTATCCCTACCCAGCTCCTCAAGGTATTTTTTGCGTATCATCTATCGTTAATGTCTTAACCGTTGAGTTATGTTCAAATTGATTTCTCTATTTGAGTTTTCGTTTGATTTGGTCTTCTGGGTGTTGTGACTTTTTTTCACAGGAGGTTATTATCAAGGACCGCCGGTGATGGCACCGCCGCAGTACGCCGCGCCGCCGCCCAAAAGACAGCCAGGCTTCTTGGAGGGATGGTATGTCAAAGCTTATTCTTTTATGTTGATAAGAATGGAACTTATATCAAAAGTGAAGGCTAGAATTGAGGGTGTTGGGAAAATAAAACATGGAACAATTAGGAGTAGATGAAATAATCTAAGGTATATCAAAAGAAAAACGACACCGATATTTATACTGGTTCATCAATTGTAAAACCATGTCTAATTTATGCTAACATTCTAGATTTATAGACACTCTCTTCACACTTCTCCCCTCTATCTCTTTCTCACACACAAGCCCTTAGAAAATAGGTCGTTATTATAAAGAATATCACGTGCGGGCGTCTAGGCGCTACGAATAGAGCATTCTGCCATCAAATTGGCGCCTCGACACCCTCCTCTCGAGCTCTTAAACATTTCAAAGCAACAGCGCGGGGCGCCTAGGGGCTTCGAAATTTGAATCACACACCTTTTTTCTTTTGTCATCTCTGTTTTTGCCTTCATATGCCTAACAAAAGGTTTAAATTTTTGTGTTGCAGCCTTGCAGCCCTGTGCTGCTGCTGTCTCCTTGATGAGTGTTGCTGTGACCCTTCCATTATCTTTGTTGCTTGATCTGAGCTTTGATTTTGCCTTACACTTCTCTTTTTCTTTGGGAGTGGTTTGATTTTGTGTAAACTTGGCAAGAAGATTAAATGGTTGTATAGAATAATAAAGCTTTGTTTTCTGTTGTAAAGTATAGAGTTTACACATTTGATGGTAACTTTATGGGTTAGCGGAGTTACAAATTTAGTCCATAAACTTTTGATTATATTGTTGCGTTTATTTAGGTTTTAAATTCGAATTATGATTCTATATGTATCTGTTGTTAACCTCTTGTTGTAAGCTAAATGATAATATAATGTTATAGTTTGATTGTACAATTCTGGTTGATTTGTGATCATATGG

mRNA sequence

AAAAAAACCATTTATTTCTTGAGCTTTCTCATAAAGTTTAGTGATTTAAATACACCCTTTGTTCTTCTTCTTCTTTCTTCTCTTGCATTGTTCAAGCTTGTGTTGGAAGAAGATATGAGTGACCCCAAATATGCCTATCCCTACCCAGCTCCTCAAGGAGGTTATTATCAAGGACCGCCGGTGATGGCACCGCCGCAGTACGCCGCGCCGCCGCCCAAAAGACAGCCAGGCTTCTTGGAGGGATGCCTTGCAGCCCTGTGCTGCTGCTGTCTCCTTGATGAGTGTTGCTGTGACCCTTCCATTATCTTTGTTGCTTGATCTGAGCTTTGATTTTGCCTTACACTTCTCTTTTTCTTTGGGAGTGGTTTGATTTTGTGTAAACTTGGCAAGAAGATTAAATGGTTGTATAGAATAATAAAGCTTTGTTTTCTGTTGTAAAGTATAGAGTTTACACATTTGATGGTAACTTTATGGGTTAGCGGAGTTACAAATTTAGTCCATAAACTTTTGATTATATTGTTGCGTTTATTTAGGTTTTAAATTCGAATTATGATTCTATATGTATCTGTTGTTAACCTCTTGTTGTAAGCTAAATGATAATATAATGTTATAGTTTGATTGTACAATTCTGGTTGATTTGTGATCATATGG

Coding sequence (CDS)

ATGAGTGACCCCAAATATGCCTATCCCTACCCAGCTCCTCAAGGAGGTTATTATCAAGGACCGCCGGTGATGGCACCGCCGCAGTACGCCGCGCCGCCGCCCAAAAGACAGCCAGGCTTCTTGGAGGGATGCCTTGCAGCCCTGTGCTGCTGCTGTCTCCTTGATGAGTGTTGCTGTGACCCTTCCATTATCTTTGTTGCTTGA

Protein sequence

MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCDPSIIFVA

Homology

[Close]

BLAST of Lcy08g000830 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-07
Identity = 35/60 (58.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 4  PKYAYPYPA-PQGGY-YQGPPVMAPPQYAAPPPKRQ----PGFLEGCLAALCCCCLLDEC 58
          P+  YP    PQ GY  QG P    PQY  PP  +Q    PGFLEGCLAALCCCCLLD C
Sbjct: 38 PQQGYPPQGYPQQGYPQQGYPPPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDAC 97

[Close]

BLAST of Lcy08g000830 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-07
Identity = 36/63 (57.14%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 4  PKYAYP---YPA---PQGGYYQGPPVMA--PPQYA-APPPKRQPGFLEGCLAALCCCCLL 58
          PK  YP   YP    P  GY QG P     PPQY+ AP  K+  G LEGCLAALCCCCLL
Sbjct: 19 PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQYSQAPQQKQNAGMLEGCLAALCCCCLL 78

[Close]

BLAST of Lcy08g000830 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 1.3e-04
Identity = 31/62 (50.00%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 4   PKYAYP---YPAPQGGYYQGPPVMAPPQYAAPPPKRQ-----PGFLEGCLAALCCCCLLD 58
           P   YP   YP PQG   QG P    PQ   PP ++Q     PG LEGC+AALCC C+LD
Sbjct: 40  PPQGYPQQGYP-PQGYPPQGYPEQGYPQQGYPPQQQQQQKHSPGMLEGCIAALCCYCVLD 99

[Close]

BLAST of Lcy08g000830 vs. ExPASy TrEMBL
Match: B9SMJ5 (CYSTM domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0230320 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-27
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+RQPGFLEGCLAALCCCCL+DECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLIDECCCD 60

Query: 61 PSIIFVA 68
          PSIIFV+
Sbjct: 61 PSIIFVS 65

[Close]

BLAST of Lcy08g000830 vs. ExPASy TrEMBL
Match: A0A1U8A0R0 (uncharacterized protein LOC104595564 OS=Nelumbo nucifera OX=4432 GN=LOC104595564 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.5e-27
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1   MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
           MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCD
Sbjct: 92  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLLDECCCD 151

Query: 61  PSIIFVA 68
           PSIIFV+
Sbjct: 152 PSIIFVS 156

[Close]

BLAST of Lcy08g000830 vs. ExPASy TrEMBL
Match: A0A314Y8T5 (CYSTM domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_05607 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.3e-27
Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MSDPKYAYPYPAP-QGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCC 60
          MSDPKY YPYPA  QGGYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCL+DECCC
Sbjct: 1  MSDPKYGYPYPAQGQGGYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLIDECCC 60

Query: 61 DPSIIF 66
          DPS++F
Sbjct: 61 DPSVLF 66

[Close]

BLAST of Lcy08g000830 vs. ExPASy TrEMBL
Match: A0A2P5FH35 (Cysteine-rich transmembrane CYSTM domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_071570 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.3e-27
Identity = 60/67 (89.55%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLLDECCCD 60

Query: 61 PSIIFVA 68
          PSIIF++
Sbjct: 61 PSIIFIS 65

[Close]

BLAST of Lcy08g000830 vs. ExPASy TrEMBL
Match: A0A2C9UQL9 (CYSTM domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G104200 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.3e-27
Identity = 60/67 (89.55%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCL+DECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLIDECCCD 60

Query: 61 PSIIFVA 68
          PSIIFV+
Sbjct: 61 PSIIFVS 65

[Close]

BLAST of Lcy08g000830 vs. NCBI nr
Match: KAG6571885.1 (hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011569.1 hypothetical protein SDJN02_26475 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.5 bits (345), Expect = 4.2e-29
Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYP P GGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD
Sbjct: 1  MSDPKYAYPYPPPPGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60

Query: 61 PSIIFV 67
          PSI+ V
Sbjct: 61 PSILLV 66

[Close]

BLAST of Lcy08g000830 vs. NCBI nr
Match: KAF9609677.1 (hypothetical protein IFM89_017856 [Coptis chinensis])

HSP 1 Score: 134.8 bits (338), Expect = 2.7e-28
Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          M+DPKYAYPYP P  GYYQGPPVMAPPQYAAPPP+RQPGFLEGCLAALCCCCLLDECCCD
Sbjct: 1  MNDPKYAYPYPYPAQGYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLLDECCCD 60

Query: 61 PSIIFV 67
          PSIIFV
Sbjct: 61 PSIIFV 66

[Close]

BLAST of Lcy08g000830 vs. NCBI nr
Match: EEF35140.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 131.0 bits (328), Expect = 4.0e-27
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+RQPGFLEGCLAALCCCCL+DECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLIDECCCD 60

Query: 61 PSIIFVA 68
          PSIIFV+
Sbjct: 61 PSIIFVS 65

[Close]

BLAST of Lcy08g000830 vs. NCBI nr
Match: XP_010254642.1 (PREDICTED: uncharacterized protein LOC104595564 [Nelumbo nucifera])

HSP 1 Score: 130.6 bits (327), Expect = 5.2e-27
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1   MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
           MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCD
Sbjct: 92  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLLDECCCD 151

Query: 61  PSIIFVA 68
           PSIIFV+
Sbjct: 152 PSIIFVS 156

[Close]

BLAST of Lcy08g000830 vs. NCBI nr
Match: DAD40851.1 (TPA_asm: hypothetical protein HUJ06_015174 [Nelumbo nucifera])

HSP 1 Score: 130.6 bits (327), Expect = 5.2e-27
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MSDPKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYPA   GYYQGPPVMAPPQYAAPPP+R+PGFLEGCLAALCCCCLLDECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLLDECCCD 60

Query: 61 PSIIFVA 68
          PSIIFV+
Sbjct: 61 PSIIFVS 65

[Close]

BLAST of Lcy08g000830 vs. TAIR 10
Match: AT4G33660.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 94.4 bits (233), Expect = 3.8e-20
Identity = 51/74 (68.92%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 1  MSDPKYAYPYPAPQGGYYQG--PPVMAPPQY--------AAPPPKRQPGFLEGCLAALCC 60
          MSDPKYAYPYPAP G Y QG  PPV  PPQY          PPP R+ GFLEG LAALCC
Sbjct: 1  MSDPKYAYPYPAP-GNYPQGPPPPVGVPPQYYPPPPPPPPPPPPPRKVGFLEGLLAALCC 60

Query: 61 CCLLDECCCDPSII 65
          CCL+DECCCDP+II
Sbjct: 61 CCLVDECCCDPTII 73

[Close]

BLAST of Lcy08g000830 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 56.6 bits (135), Expect = 8.8e-09
Identity = 35/60 (58.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 4  PKYAYPYPA-PQGGY-YQGPPVMAPPQYAAPPPKRQ----PGFLEGCLAALCCCCLLDEC 58
          P+  YP    PQ GY  QG P    PQY  PP  +Q    PGFLEGCLAALCCCCLLD C
Sbjct: 38 PQQGYPPQGYPQQGYPQQGYPPPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDAC 97

[Close]

BLAST of Lcy08g000830 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-08
Identity = 36/63 (57.14%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 4  PKYAYP---YPA---PQGGYYQGPPVMA--PPQYA-APPPKRQPGFLEGCLAALCCCCLL 58
          PK  YP   YP    P  GY QG P     PPQY+ AP  K+  G LEGCLAALCCCCLL
Sbjct: 19 PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQYSQAPQQKQNAGMLEGCLAALCCCCLL 78

[Close]

BLAST of Lcy08g000830 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 5.4e-06
Identity = 29/60 (48.33%), Postives = 32/60 (53.33%), Query Frame = 0


Query: 4   PKYAYPYPAPQGGYYQGPPVMAPPQYAAPPPKRQP------GFLEGCLAALCCCCLLDEC 58
           P   YP   P    YQGPP   PP Y   PPK +       GF+EGCLA LCCC LL+ C
Sbjct: 67  PPPQYPQGHPPQYPYQGPP---PPHYGQAPPKNKKDKKDSGGFMEGCLAMLCCCVLLEAC 123

[Close]

BLAST of Lcy08g000830 vs. TAIR 10
Match: AT1G12810.1 (proline-rich family protein )

HSP 1 Score: 42.7 bits (99), Expect = 1.3e-04
Identity = 32/85 (37.65%), Postives = 35/85 (41.18%), Query Frame = 0


Query: 8   YPYPAPQGGY-----------YQGPPVMA--PPQYAAPPPKRQP---------------- 59
           YP P P GGY           YQG       P Q+  PPP   P                
Sbjct: 44  YPPPQPYGGYPPPSSRPYEGGYQGYFAGGGYPHQHHGPPPPPPPQNYDHCHHDHHHYQDS 103

The following BLAST results are available for this feature:

BLAST of Lcy08g000830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	1.2e-07	58.33	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q9FJW3	2.1e-07	57.14	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
Q8LCL8	1.3e-04	50.00	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]

BLAST of Lcy08g000830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B9SMJ5	1.9e-27	91.04	CYSTM domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0230320 PE=3...	[more]
A0A1U8A0R0	2.5e-27	91.04	uncharacterized protein LOC104595564 OS=Nelumbo nucifera OX=4432 GN=LOC104595564...	[more]
A0A314Y8T5	3.3e-27	87.88	CYSTM domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN...	[more]
A0A2P5FH35	3.3e-27	89.55	Cysteine-rich transmembrane CYSTM domain containing protein OS=Trema orientale O...	[more]
A0A2C9UQL9	4.3e-27	89.55	CYSTM domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G104200 ...	[more]

BLAST of Lcy08g000830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571885.1	4.2e-29	93.94	hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAF9609677.1	2.7e-28	92.42	hypothetical protein IFM89_017856 [Coptis chinensis]	[more]
EEF35140.1	4.0e-27	91.04	conserved hypothetical protein [Ricinus communis]	[more]
XP_010254642.1	5.2e-27	91.04	PREDICTED: uncharacterized protein LOC104595564 [Nelumbo nucifera]	[more]
DAD40851.1	5.2e-27	91.04	TPA_asm: hypothetical protein HUJ06_015174 [Nelumbo nucifera]	[more]

BLAST of Lcy08g000830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33660.1	3.8e-20	68.92	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT2G41420.1	8.8e-09	58.33	proline-rich family protein	[more]
AT5G67600.1	1.5e-08	57.14	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT3G49845.1	5.4e-06	48.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G12810.1	1.3e-04	37.65	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028144	Cysteine-rich transmembrane CYSTM domain	PFAM	PF12734	CYSTM	coord: 12..58 e-value: 4.2E-15 score: 55.8
None	No IPR available	PANTHER	PTHR31568:SF105	CYSTEINE-RICH AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN A-LIKE	coord: 1..66
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 1..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g000830.1	Lcy08g000830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane