Lcy08g000450 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g000450
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr08: 750472 .. 755385 (+)
RNA-Seq ExpressionLcy08g000450
SyntenyLcy08g000450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAGTACCAGTTTTTTTTCCGACCGAGTGCTGTGTTAAGTGTCAACACGTCCAGAAAGTCGTCGGCGATTAAAGAAACAAGCAAAACGGAAATCAGATCACCGACTGAACGATCCATTTCCATGGCTTCTCGCACTCTCTTCCTCACCTTAAGCCGGTAAGTATCGCTGTTTCTATATTCTATGCAATTTCATTTCTTCTCCATTTCTCCTTTTGGCTGCTGGGAAGATCGACGAGTGTTTGATCCCAAATTTCCGCTTTGAATTGAACTTAATCTTGTGTTCCATGAGGAACGGCTTACTGCATTCCTTTTAATCTCTAGCGTCTCCCAGCAGTCAAATCGGGTGGGGGTTGGGGACGTTCTACCTCTTTCATTATTTGATGATTTGTGTGAATCGATCTGAACCCTAGAAAATTCAGGAACAGAGGCTTCTTAAATCGAAGTTTCAAAGCGACCCCGGTCTTCAATGAGGCTAGTGTTTCGAATTATTGCTCTCATGGAGCTCTGAGGAGTGAATCTTTTGAAGAATCAGTGAATTCTGAAGAATCCAATGACTTGAAGAGCAGAATATTCCGGCTCAGATTGCCCAAGCGGAGCGCTACCAACGTTCTTCAGAGATGGATGAGTGAGGGCAATCAAGTTTCGATCACTGAGCTCCGGCATATCTCCAAAGAGCTCAGAAGGGTTCAGCGGTATAAGCACGCGCTCGAGGTACTATTTTATTTGTTTTCTTCATCTTCTTGCTAAAGTCTTGTGCTTTCAGATGATAAGTGGCAATAACAAAATTGAAGTGAAATTTACTGTGGCTCTTAAGAGTCGTTGGGACAACTCTCAAGAAATCAAATGTGCACTTCTCTGTAATTAAACATGATTATAGGGGAAAGCGAACAAGTACTTCGAAAATTTTCAGCTAAATAAGAAATGGCTAGCTTCTAAAATCTAATTCTAAGGAAATGTGAAATTTAACTCATGTACTCGTGATCTGCATAAATATTGTTGAGGGAGGTTTGTATTTCTAATTCTTAGATATATGGTTAGTCTAGTTAGTTTAGTCTTCTAGAGTGAAGGAAGTATACTCTTCAACCTTATTTTTGGTATTAGAACAAGAAGATTTATATGTCCGCGAACCAGAACGTTTTAGCCTGTTGAATCAAACATGTGGAGAGACTGGTGTTTGATGCAAGCCATATGAAATAAGCATGAAAAGTACCATTTTTAGGAACTAGAAAACCCACGGGTCATTTCATGTAATATTTGCTGAGTTCATTTAGATTAACATTCTAAAATGCATACCAATGTCTGGTTGTTGTGTCTCTCAAGTAAAAGTAGGACAAAGAGAATAAAATACTATTTGCTGAGGGCTAAAATTGCCAAAATAATTGAGCTCAAGAGTTTTTCAAAACCCATGTGCAACAAGACAGGCCTCAAGTCTACTGTCACTACCATCGTCATTAACCTTTCCTTTTAAAGCAAATACACCTATTATTAACATTGTAATCCCATAGAAAATAGAATACGTCAAAGAAACCATGTATTATTACACAAGAGAACGTTATACCCTGTTCCAGGGTAGACTTCCAAGTAGAATTAGCAATTTGTGGGTTCACTTGGTAATAGTGAAGAGGCATTGGCATCAAAGTAAGAATTAGATATTATTTTTCCTGCTTTGAATTGTTTTATCATGGTATGGTGGGATTAGGGAAGGATAGGTTATGAATAGAAATAGACAATTCAGTAGATAACAAAGGAAGAGAAGCAAACAACAGAGCCATTGATTGGTGAGGAAGTGTAAGAATCAGTAACTGGTAAAGGTGAATGGTTTGTGACATCGCTAGGAGGAGGGCTAAAATTATCATCACTAGTGACTTGGGATGCTTTGGAGCACATATCTAAATCAATTGACCACGATTGAAGTAATACAAAATCTTATTTTTAAAGCCTCCGGGGAAGAAGAGGAAACTTTATGTTTGAAAGGAAATTCAGGCAGAAACGTATATGACCAGACCACTTTTTGCGGACTTATTAGACACAAATTGAAAGCTCTAGAACTTATTAGACACAAAATCAAAAGTTTAGAGACTTATTTGACACTTTTTAATGGCCAGAGACCTATTAGACACAAAATTGAAAGTTCAAGGAGTTGTTTGACACAAACATCCAAGTTCATGGACTGAACTTGTAATCTAACATTTCTTAAATCATCTGTTGATGTTTCCTTTCAACACAAAAGTTTGTTGATGAACATGAAGATAAGGACAGGATGGTGGAAGAAAACACTTAGTTGATTGAGTGCAGCCATGATGCTTCTAAACTTACTTTCTAGGTAATTTGAGTTTTTCATCAAATTGTCTATCAATAAATGCATGAAATTGAAGGCAGAAAGATTTGGTCTCAGATATGTCTTAGAGGGATAATCTGAGTAAATGTATTTATAAAAAAAACTTGAATAGTATCAAAAACTTGATAAAGATAAAATAGGAGCCGGTCCCTAATGTCTGCATGAATAACTTTAAATGATTTAGCAGCTATATGACTGATAGGAACTGTATTAGGATAAAATTAGGAATATAAATATTATTAGCGTATTAAGGGTACTTTGGTAATTGGTTATAGAAGTTTATGGTAAATTATTATAAATAGAGAGTGTGGGGAAGGAGAAAGGTAGGCAATTGTTTAGTTGGACTAGAGCTTGAGTGATCTCTAGGGAGGGAGGGTTAGATAAGGTTCAAGTACCTCGAATTACTCGGTTTATCTTGTAGTTCTTGTATTTTTTATGTTGCAATGTATTTGGGGTTCTATCAATGACGAGATGAAGGAAAAGAGATTTATGCAATTTGCTTAATCGACATGCTTGGACAAAGTTTTTAACTCTTTCCCTGGAATGTCCAGAACTGAGAGAAAGGATTCCAGTACAAAAAGGGATGGTCAATACACTGTTGCGATAGATTTGCTGAGCTGGCACTGGTAACATGGGGCAAAATTAGTAGTTGGGACACTATTGCAAGACAAATTACTGGGACCAGAGTTTCTAAATTTAGCAGAGAATAGACACTCCTGTGTTGTTAGCCCTGGATTTTGCAGCAGAAGTTTTAGTCTCAAAGTGATATGGCCCGTCCTTCACCCTGCAATAGTACTACTGTCTCAGTCTTGTCCTTTACTGCAAAACAAATTACTGGCTGCCATAGTTTCTAAATTTAGGAGGGAGTAGACACTATTGTGTTGTTAATCTTGGATTTTGCAGAAGTCATTTTAGTCTCAAAGTGATATGGCCCATCCTTTGCTCTGCAACAGTACCACTGTCTCAGTCTTTGTCCTTTATGGAACATAAGAGGAGGGAATTCCACAACTGATGTACTCGGTAAATGTTTTGTAATGAGATGAATGCAAGAAGTATATTTATGGGCAAATGAAACAATGGGAAGAAGATTTGAGGGACTGTTGGGCTATACGAGAAATTGATAGTTGTGATCCATTAAAATGTTTTGCTGAAAAGAAAAGGAGGAATTATCCTGTTTGGAGTCTTCCTTAATCCTTGGAGAATAATCCACATATTTTGAGAGTCCAATTAAATGGTTGAAGAATTGTATTTAAATGTTCCTTCAAAGGATACTCTGCTGCATAAATTATTAAAAATGTAATTGTATGCTAATATTCAGGAAAAATGGGTCAAGTTGCATTGTATTACAAGTGAAAATGAATTTTTCGTTTGCTGAAATATTTCTTATTTCTCATTTCTCATTTGAGAAAAGGATAAGGAACTGGTTAAAGGATCACCGTCGTTTTCTTTGGCTCATAATCTGTAGAACACTGATCAGGGGGCTTGTACGTCATCTACATTATTTACAATGAACGGACAATCTGTCTACATTACACTTTTGCACATCATTAACTGTCAACACTGTTTTCTTGCTTGCAGATTTTAGAATGGATGGTGACTCATAATAAATTTGAGTTATCTGATTCTGACTTTGCAGTCCGTATTGACTTGATGACAAAAGTATTTGGCATCGATGCTGCTGAACGTTACTTTGAAGGTCTGCCTATTCATGCCAAAACCTGTGAGACGTATACTGCTCTCCTTCACTCTTTTGCTGGGTCCAAATTGACTGAAAAGGCTGAAATTATTTATGAAAGAATAAAGGAGACAGAAGTACCTCTCACTGCTCTTCCGTTCAACGAGATGATGACTTTGTACATGTCGGTCGGGCTAGTAGAAAAGGTATCTTCGATTGTGGATGACCTGAAACAAAGGAAGGTTCATACTGACATTTTCACTTATAATCTTTGGATCAGCTCCTTGGCTGCAGCTTTAAATATCGATGGCGTTAGACGGGTTCTTGATGAGATGAAATGCGACCCCAATTCGAATGTAGATTGGGTGCGATATATTGATCTTGTGAACATCTATGTTACGTCAGCTCATCTATTGCATTCGGGGTCGAACTCCGTAGTCGAGTCTGAGAGTGGCATTACGCAGCGAGAATGGATTACATATGACCTCCTCGTTATCTTGTATGCTGGTCTTGGAAACAAAGACAAAATCGATCAGATTTGGAGATCATTAAGGATGACGAAGCAAAAGATGACAAGCAGAAACTACATTTGCATTCTTTCTTGTTACCTGATGCTTGATCATTTGAAGGAAATTGGAGAAGTTATTGATCAGTGGAAACAATCAACCACTACAGATTTTGATGTTTCTGCCTGTAACAGGCTTGTAAATGCGTTTGTTGAAGCTGGATTGAATGAGAAAGCCAGCAGTTTTGTTAACCTTTTGATTCAGAAGAACTGTAAACCCATAGAAGCAGAGTTGTAGAAAGTAGGTTTAATTCTTAATTTTATCTATCTTGTTTTGATTCAACAAGTTTCAAATGTTTTGTTTTAGTTTTCAATTTTCAAACGTTGCCCTTA

mRNA sequence

AAAAAAGTACCAGTTTTTTTTCCGACCGAGTGCTGTGTTAAGTGTCAACACGTCCAGAAAGTCGTCGGCGATTAAAGAAACAAGCAAAACGGAAATCAGATCACCGACTGAACGATCCATTTCCATGGCTTCTCGCACTCTCTTCCTCACCTTAAGCCGAAAATTCAGGAACAGAGGCTTCTTAAATCGAAGTTTCAAAGCGACCCCGGTCTTCAATGAGGCTAGTGTTTCGAATTATTGCTCTCATGGAGCTCTGAGGAGTGAATCTTTTGAAGAATCAGTGAATTCTGAAGAATCCAATGACTTGAAGAGCAGAATATTCCGGCTCAGATTGCCCAAGCGGAGCGCTACCAACGTTCTTCAGAGATGGATGAGTGAGGGCAATCAAGTTTCGATCACTGAGCTCCGGCATATCTCCAAAGAGCTCAGAAGGGTTCAGCGGTATAAGCACGCGCTCGAGATTTTAGAATGGATGGTGACTCATAATAAATTTGAGTTATCTGATTCTGACTTTGCAGTCCGTATTGACTTGATGACAAAAGTATTTGGCATCGATGCTGCTGAACGTTACTTTGAAGGTCTGCCTATTCATGCCAAAACCTGTGAGACGTATACTGCTCTCCTTCACTCTTTTGCTGGGTCCAAATTGACTGAAAAGGCTGAAATTATTTATGAAAGAATAAAGGAGACAGAAGTACCTCTCACTGCTCTTCCGTTCAACGAGATGATGACTTTGTACATGTCGGTCGGGCTAGTAGAAAAGGTATCTTCGATTGTGGATGACCTGAAACAAAGGAAGGTTCATACTGACATTTTCACTTATAATCTTTGGATCAGCTCCTTGGCTGCAGCTTTAAATATCGATGGCGTTAGACGGGTTCTTGATGAGATGAAATGCGACCCCAATTCGAATGTAGATTGGGTGCGATATATTGATCTTGTGAACATCTATGTTACGTCAGCTCATCTATTGCATTCGGGGTCGAACTCCGTAGTCGAGTCTGAGAGTGGCATTACGCAGCGAGAATGGATTACATATGACCTCCTCGTTATCTTGTATGCTGGTCTTGGAAACAAAGACAAAATCGATCAGATTTGGAGATCATTAAGGATGACGAAGCAAAAGATGACAAGCAGAAACTACATTTGCATTCTTTCTTGTTACCTGATGCTTGATCATTTGAAGGAAATTGGAGAAGTTATTGATCAGTGGAAACAATCAACCACTACAGATTTTGATGTTTCTGCCTGTAACAGGCTTGTAAATGCGTTTGTTGAAGCTGGATTGAATGAGAAAGCCAGCAGTTTTGTTAACCTTTTGATTCAGAAGAACTGTAAACCCATAGAAGCAGAGTTGTAGAAAGTAGGTTTAATTCTTAATTTTATCTATCTTGTTTTGATTCAACAAGTTTCAAATGTTTTGTTTTAGTTTTCAATTTTCAAACGTTGCCCTTA

Coding sequence (CDS)

ATGGCTTCTCGCACTCTCTTCCTCACCTTAAGCCGAAAATTCAGGAACAGAGGCTTCTTAAATCGAAGTTTCAAAGCGACCCCGGTCTTCAATGAGGCTAGTGTTTCGAATTATTGCTCTCATGGAGCTCTGAGGAGTGAATCTTTTGAAGAATCAGTGAATTCTGAAGAATCCAATGACTTGAAGAGCAGAATATTCCGGCTCAGATTGCCCAAGCGGAGCGCTACCAACGTTCTTCAGAGATGGATGAGTGAGGGCAATCAAGTTTCGATCACTGAGCTCCGGCATATCTCCAAAGAGCTCAGAAGGGTTCAGCGGTATAAGCACGCGCTCGAGATTTTAGAATGGATGGTGACTCATAATAAATTTGAGTTATCTGATTCTGACTTTGCAGTCCGTATTGACTTGATGACAAAAGTATTTGGCATCGATGCTGCTGAACGTTACTTTGAAGGTCTGCCTATTCATGCCAAAACCTGTGAGACGTATACTGCTCTCCTTCACTCTTTTGCTGGGTCCAAATTGACTGAAAAGGCTGAAATTATTTATGAAAGAATAAAGGAGACAGAAGTACCTCTCACTGCTCTTCCGTTCAACGAGATGATGACTTTGTACATGTCGGTCGGGCTAGTAGAAAAGGTATCTTCGATTGTGGATGACCTGAAACAAAGGAAGGTTCATACTGACATTTTCACTTATAATCTTTGGATCAGCTCCTTGGCTGCAGCTTTAAATATCGATGGCGTTAGACGGGTTCTTGATGAGATGAAATGCGACCCCAATTCGAATGTAGATTGGGTGCGATATATTGATCTTGTGAACATCTATGTTACGTCAGCTCATCTATTGCATTCGGGGTCGAACTCCGTAGTCGAGTCTGAGAGTGGCATTACGCAGCGAGAATGGATTACATATGACCTCCTCGTTATCTTGTATGCTGGTCTTGGAAACAAAGACAAAATCGATCAGATTTGGAGATCATTAAGGATGACGAAGCAAAAGATGACAAGCAGAAACTACATTTGCATTCTTTCTTGTTACCTGATGCTTGATCATTTGAAGGAAATTGGAGAAGTTATTGATCAGTGGAAACAATCAACCACTACAGATTTTGATGTTTCTGCCTGTAACAGGCTTGTAAATGCGTTTGTTGAAGCTGGATTGAATGAGAAAGCCAGCAGTTTTGTTAACCTTTTGATTCAGAAGAACTGTAAACCCATAGAAGCAGAGTTGTAG

Protein sequence

MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESNDLKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKPIEAEL
Homology
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BLAST of Lcy08g000450 vs. ExPASy Swiss-Prot
Match: Q94B59 (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09450 PE=1 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.1e-125
Identity = 231/405 (57.04%), Postives = 303/405 (74.81%), Query Frame = 0 

Query: 1   MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESND 60
           MA+R+LF +L  +  N G L  +F      +  S S Y +  A+ +   EE   SEE +D
Sbjct: 1   MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRFSKS-YNADAAIGNSLVEE---SEEKDD 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           LKSRIFRLRLPKRSAT VL++W+ EGNQ++I ELR ISKELRR +RYKHALE+ EWMV H
Sbjct: 61  LKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH 120

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
            + ++SD+D+A RIDL++KVFGIDAAERYFEGL I +KT ETYT+LLH++A SK TE+AE
Sbjct: 121 EESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAE 180

Query: 181 IIYERIKETE-VPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISS 240
            +++RI E++ +   A+ +NEMMTLYMSVG VEKV  +++ LKQ+KV  DIFTYNLW+SS
Sbjct: 181 ALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSS 240

Query: 241 LAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQ 300
            AA  NID +R++L+EM+ D +SN  WVRYIDL +IY+ S+ + ++ S   VE+E  I+Q
Sbjct: 241 CAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQ 300

Query: 301 REWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEV 360
           REWITYD L+IL+ GLGNK  IDQIW+SLR T Q ++SR+YIC+LS YLML HL+E  E+
Sbjct: 301 REWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEI 360

Query: 361 IDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNC 405
           I QWK+S TT+FD SAC R++NAF + GL   AS F  +L+   C
Sbjct: 361 IHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKC 401

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BLAST of Lcy08g000450 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.9e-53
Identity = 114/361 (31.58%), Postives = 205/361 (56.79%), Query Frame = 0 

Query: 51  ESVNSEES-----NDLKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQ 110
           ES N +E+     + L  R+  L   KRSA   +++W  EG+ V   EL  I +ELR+++
Sbjct: 48  ESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIK 107

Query: 111 RYKHALEILEWMVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTA 170
           RYKHALEI EWMV     +L   D+AV +DL++K+ G+++AE++FE +P   +     T+
Sbjct: 108 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 167

Query: 171 LLHSFAGSKLTEKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRK 230
           LLHS+  +KL++KAE ++E++ E     + LP+N M+++Y+S G  EKV  ++ +LK R 
Sbjct: 168 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR- 227

Query: 231 VHTDIFTYNLWISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHS 290
              DI TYNLW+++ A+  +++G  +V  + K +   N DWV Y  L N+Y  + + +  
Sbjct: 228 TSPDIVTYNLWLTAFASGNDVEGAEKVYLKAK-EEKLNPDWVTYSVLTNLYAKTDN-VEK 287

Query: 291 GSNSVVESESGITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILS 350
              ++ E E  ++++  + Y  L+ L+A LG+KD ++  W+ ++ + +KM    Y+ ++S
Sbjct: 288 ARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMIS 347

Query: 351 CYLMLDHLKEIGEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCK 407
             + L   ++   + D+W+  + T  D    N ++  ++          F   +++K   
Sbjct: 348 AVVKLGEFEQAKGLYDEWESVSGTG-DARIPNLILAEYMNRDEVLLGEKFYERIVEKGIN 404

[Close]
BLAST of Lcy08g000450 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.1e-50
Identity = 106/343 (30.90%), Postives = 187/343 (54.52%), Query Frame = 0 

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           L+ R+ R   P  S   VL  W+ +GN V  +EL  I K LR+  R+ HAL+I +WM  H
Sbjct: 40  LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEH 99

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
              E+S+ D A+R+DL+ KV G+  AE++FE +P+  +    Y ALL+ +A  K+  KAE
Sbjct: 100 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 159

Query: 181 IIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSL 240
            +++ +KE       LP+N M+ LY+  G    V  ++ +++   V  DIFT N  + + 
Sbjct: 160 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAY 219

Query: 241 AAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGI-TQ 300
           +   +++G+ + L   + D   ++DW  Y D  N Y+  A L       + +SE  +  Q
Sbjct: 220 SVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYI-KAGLTEKALEMLRKSEQMVNAQ 279

Query: 301 REWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEV 360
           +    Y++L+  Y   G K+++ ++W SL        +  YI ++S  L +D ++E+ ++
Sbjct: 280 KRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKI 339

Query: 361 IDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQK 403
           +++W+   +  FD+   + L+  + + G+ EKA   VN+L+QK
Sbjct: 340 MEEWEAGHSL-FDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379

[Close]
BLAST of Lcy08g000450 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.0e-47
Identity = 116/354 (32.77%), Postives = 185/354 (52.26%), Query Frame = 0 

Query: 59  NDLKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMV 118
           N LK  I R   P+RS T++LQ  +  G+ VS++ELR ISK L R  RY  AL+++EWM 
Sbjct: 39  NSLK-EILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWME 98

Query: 119 THNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTC-----ETYTALLHSFAGS 178
                E S  D A+R+DL+ K  G+   E YFE L +H+          Y  LL ++  +
Sbjct: 99  NQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKL-LHSSVSMRVAKSAYLPLLRAYVKN 158

Query: 179 KLTEKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTY 238
           K+ ++AE + E++      +T  PFNEMM LY + G  EKV  +V  +K  K+  ++ +Y
Sbjct: 159 KMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSY 218

Query: 239 NLWISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVE- 298
           NLW+++      +  V  V  EM  D +  V W     L N+Y+ S       +  V+E 
Sbjct: 219 NLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSG--FDEKARLVLED 278

Query: 299 SESGITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDH 358
           +E  + +   + Y  L+ LYA LGNK+ + ++W   +    +++  NYIC+LS  +    
Sbjct: 279 AEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGD 338

Query: 359 LKEIGEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKP 407
           L+E   V  +W ++   ++DV   N L+ A+V  G   KA S    ++++   P
Sbjct: 339 LEEAERVFSEW-EAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTP 387

[Close]
BLAST of Lcy08g000450 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 2.4e-45
Identity = 103/349 (29.51%), Postives = 189/349 (54.15%), Query Frame = 0 

Query: 59  NDLKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMV 118
           N +  +I  +  P+  A +VL +W   G +++  EL  + KELR+ +R   ALE+ +WM 
Sbjct: 67  NAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMN 126

Query: 119 TH-NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTE 178
               +F LS SD A+++DL+ KV GI  AE +F  LP + K    Y +LL+++  +K  E
Sbjct: 127 NRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSRE 186

Query: 179 KAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWI 238
           KAE +   +++    L  LPFN MMTLYM++   +KV ++V ++KQ+ +  DI++YN+W+
Sbjct: 187 KAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWL 246

Query: 239 SSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGI 298
           SS  +  +++ +  V  +MK D +   +W  +  +  +Y+          +++ + E+ I
Sbjct: 247 SSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGE-TEKAEDALRKVEARI 306

Query: 299 TQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIG 358
           T R  I Y  L+ LY  LGNK ++ ++W   +     + +  Y  ++S  + +  ++   
Sbjct: 307 TGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAE 366

Query: 359 EVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKP 407
           +V ++W     + +D    N L+NA+V+    E A    + +++   KP
Sbjct: 367 KVYEEW-LPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKP 413

[Close]
BLAST of Lcy08g000450 vs. ExPASy TrEMBL
Match: A0A1S3C0B7 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495377 PE=4 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 4.0e-200
Identity = 346/409 (84.60%), Postives = 386/409 (94.38%), Query Frame = 0 

Query: 1   MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESND 60
           MASRTLFL  SRKFRNRGFLN+SFK+ PVFNEA++SNYCSHGALRSESF++SVNSEE ND
Sbjct: 1   MASRTLFLAFSRKFRNRGFLNQSFKSIPVFNEANISNYCSHGALRSESFDDSVNSEEFND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           LKSRIF+LRLPKRSA  VL+RW SEGNQV+ITELR+ISKELR++QRYKHALEILEWMVTH
Sbjct: 61  LKSRIFQLRLPKRSAIRVLERWTSEGNQVTITELRNISKELRKIQRYKHALEILEWMVTH 120

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
           NK +LSDSDFA+RIDLMTKVFG+DAAERYFEGLPI AKTCETYTALLHSFAGSKLT+KAE
Sbjct: 121 NKSDLSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 180

Query: 181 IIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSL 240
            +YE+IKE+++PLTALPFNEMMTLY S+G VEKVSSIVDDLKQ+ VH DIFTYNLWISSL
Sbjct: 181 TLYEKIKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLWISSL 240

Query: 241 AAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQR 300
           AAALNIDGV+++L+EM  +PNSN +WVRYI+LVNIY+ SA+LLHSGSNSVVES SGI+QR
Sbjct: 241 AAALNIDGVKQILNEMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASGISQR 300

Query: 301 EWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLL+ILYAGLGNKD+IDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 360

Query: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKPIEA 410
           DQWKQSTTTDFD+S+CNRLVNAFVEAGLNEKA+SFVN+LIQKNC P  A
Sbjct: 361 DQWKQSTTTDFDISSCNRLVNAFVEAGLNEKANSFVNVLIQKNCDPTVA 409

[Close]
BLAST of Lcy08g000450 vs. ExPASy TrEMBL
Match: A0A6J1I8J2 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470636 PE=4 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 5.7e-199
Identity = 350/409 (85.57%), Postives = 385/409 (94.13%), Query Frame = 0 

Query: 1   MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESND 60
           MASR+LFL+L+RKFRNRGFLN+SFKA PVFNEASVSNYCSHGALRSES +ESVNSEE+ND
Sbjct: 1   MASRSLFLSLNRKFRNRGFLNQSFKAIPVFNEASVSNYCSHGALRSESLDESVNSEETND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           LKSRIFRLRLPKRSA NV+QRW SEGNQV+ITELR+ISKELRR+QRYKHALEILEWMV+H
Sbjct: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
           N+ ELSDSDFA+RIDLMTKVFGIDAAERYFEGLPI AKTCETYT+LLHSF+GSKLTEKAE
Sbjct: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTSLLHSFSGSKLTEKAE 180

Query: 181 IIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSL 240
            +YE++KE+ +PLTALPFNEMMTLY SVG VEKVSSIV+DLKQ KVH+DIFTYNLWISSL
Sbjct: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVNDLKQSKVHSDIFTYNLWISSL 240

Query: 241 AAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQR 300
           AA LNIDGVR++LDEM  +PNSN  WVRYI+LVNIY+TSAHLLHS SNSVVESESGITQR
Sbjct: 241 AATLNIDGVRQILDEMTRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300

Query: 301 EWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLL+ILYAG+GNKDK+D+IWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI
Sbjct: 301 EWITYDLLIILYAGMGNKDKVDEIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360

Query: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKPIEA 410
           DQWKQS+T DFDVSACNRLVNAFVEAG  EKA+SFV +L  KNC+P EA
Sbjct: 361 DQWKQSSTGDFDVSACNRLVNAFVEAGFKEKANSFVTIL--KNCEPTEA 407

[Close]
BLAST of Lcy08g000450 vs. ExPASy TrEMBL
Match: A0A6J1GLW9 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455447 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 7.5e-199
Identity = 352/409 (86.06%), Postives = 383/409 (93.64%), Query Frame = 0 

Query: 1   MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESND 60
           MASR+LFL+L+RKFRNRGFLN+SFKA  VFNEASVSNYCSHGALRSES +ESVNSEE+ND
Sbjct: 1   MASRSLFLSLNRKFRNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           LKSRIFRLRLPKRSA NV+QRW SEGNQV+ITELR+ISKELRR+QRYKHALEILEWMV+H
Sbjct: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
           N+ ELSDSDFA+RIDLMTKVFGIDAAERYFEGLPI+AKTCETYTALLHSFAGSKLTEKAE
Sbjct: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180

Query: 181 IIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSL 240
            +YE++KE+ +PLTALPFNEMMTLY SVG VEKVSSIVDDLKQ KVH DIFTYNLWISSL
Sbjct: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 240

Query: 241 AAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQR 300
           AA LNIDGVRR+LDEM  +PNSN  WVRYI+LVNIY+TSAHLLHS SNSVVESESGITQR
Sbjct: 241 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300

Query: 301 EWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLL+ILYAG+GNKDKIDQIWRSLRMT+QKMTSRNYICILSCYLMLDHLKEIGEVI
Sbjct: 301 EWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVI 360

Query: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKPIEA 410
           DQWKQS++ DFDVSACNRLVNAFVEAG  EK +SFV +L  KNC+P EA
Sbjct: 361 DQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 407

[Close]
BLAST of Lcy08g000450 vs. ExPASy TrEMBL
Match: A0A0A0K649 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066290 PE=4 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 1.3e-198
Identity = 345/409 (84.35%), Postives = 385/409 (94.13%), Query Frame = 0 

Query: 1   MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESND 60
           MASR LFL  SRKFRNRGFLN+SFK+TPVFNEA+VSNYCSHGALRSESF+ESVN EE ND
Sbjct: 1   MASRALFLAFSRKFRNRGFLNQSFKSTPVFNEANVSNYCSHGALRSESFDESVNYEEFND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           LKSRIF+LRLPKRSA  VL+RW SEGNQV+I ELR+ISKELR++QRYKHALEILEWMV+H
Sbjct: 61  LKSRIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSH 120

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
           N+ ELSDSDFA+RIDLMTKVFG+DAAERYFEGLPI AKTCETYTALLHSFAGSKLT+KAE
Sbjct: 121 NQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 180

Query: 181 IIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSL 240
            +YE++KE+++PLTALPFNEMMTLY S+G VEKVSSIVDDLKQR VH DIFTYNLWISSL
Sbjct: 181 TLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240

Query: 241 AAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQR 300
           AAALNIDGV+++L+EM  +PNSN +WVRYI+LVNIYV SA+LLHS SNSVVES SGI+QR
Sbjct: 241 AAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQR 300

Query: 301 EWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLL+ILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 360

Query: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKPIEA 410
           DQWKQSTTTDFD+S+CNRLVNAF+EAGL+EKA+SFVN+LIQKNC+P EA
Sbjct: 361 DQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 409

[Close]
BLAST of Lcy08g000450 vs. ExPASy TrEMBL
Match: A0A5D3C6J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001890 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 9.1e-197
Identity = 343/409 (83.86%), Postives = 383/409 (93.64%), Query Frame = 0 

Query: 1   MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESND 60
           MASRTLFL  S   RNRGFLN+SFK+ PVFNEA++SNYCSHGALRSESF++SVNSEE ND
Sbjct: 1   MASRTLFLAFS---RNRGFLNQSFKSIPVFNEANISNYCSHGALRSESFDDSVNSEEFND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           LKSRIF+LRLPKRSA  VL+RW SEGNQV+ITELR+ISKELR++QRYKHALEILEWMVTH
Sbjct: 61  LKSRIFQLRLPKRSAIRVLERWTSEGNQVTITELRNISKELRKIQRYKHALEILEWMVTH 120

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
           NK +LSDSDFA+RIDLMTKVFG+DAAERYFEGLPI AKTCETYTALLHSFAGSKLT+KAE
Sbjct: 121 NKSDLSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 180

Query: 181 IIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSL 240
            +YE+IKE+++PLTALPFNEMMTLY S+G VEKVSSIVDDLKQ+ VH DIFTYNLWISSL
Sbjct: 181 TLYEKIKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLWISSL 240

Query: 241 AAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQR 300
           AAALNIDGV+++L+EM  +PNSN +WVRYI+LVNIY+ SA+LLHSGSNSVVES SGI+QR
Sbjct: 241 AAALNIDGVKQILNEMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASGISQR 300

Query: 301 EWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLL+ILYAGLGNKD+IDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 360

Query: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKPIEA 410
           DQWKQSTTTDFD+S+CNRLVNAFVEAGLNEKA+SFVN+LIQKNC P  A
Sbjct: 361 DQWKQSTTTDFDISSCNRLVNAFVEAGLNEKANSFVNVLIQKNCDPTVA 406

[Close]
BLAST of Lcy08g000450 vs. NCBI nr
Match: XP_038888933.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 727.2 bits (1876), Expect = 7.6e-206
Identity = 360/409 (88.02%), Postives = 386/409 (94.38%), Query Frame = 0 

Query: 1   MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESND 60
           MASRT FLT SR FRNRGFLN++FKA PVF+E SVSNYCSHGALRSESF+ESVNSEE+ND
Sbjct: 1   MASRTFFLTFSRNFRNRGFLNQNFKAIPVFSEVSVSNYCSHGALRSESFDESVNSEETND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           LKSRIFRLRLPKRSATNVLQRWMSEGNQV+ITELR+ISKELRR+QRYKHALEILEWMVTH
Sbjct: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVTITELRNISKELRRIQRYKHALEILEWMVTH 120

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
           N+FELSDSDFA+RIDLMTKVFGIDAAERYFEGLP  +KTCETYTALLHSFAGSKLTEKAE
Sbjct: 121 NEFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLTEKAE 180

Query: 181 IIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSL 240
            +Y +I E ++PLTALPFNEMMTLYMSVG VEKVSSI+DDLKQR VH DIFTYNLWISSL
Sbjct: 181 SLYAKIMELDIPLTALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLWISSL 240

Query: 241 AAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQR 300
           A ALNIDGVR++L+EM   PNSN DWVRYIDLVNIYV SAHLLHSG NS+VESESGI+QR
Sbjct: 241 AGALNIDGVRQILNEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESGISQR 300

Query: 301 EWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLL+ILYAGLGNKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360

Query: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKPIEA 410
           DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKA++FV LLIQKNC+P EA
Sbjct: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 409

[Close]
BLAST of Lcy08g000450 vs. NCBI nr
Match: XP_038888934.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 718.0 bits (1852), Expect = 4.6e-203
Identity = 358/409 (87.53%), Postives = 384/409 (93.89%), Query Frame = 0 

Query: 1   MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESND 60
           MASRT FLT S   RNRGFLN++FKA PVF+E SVSNYCSHGALRSESF+ESVNSEE+ND
Sbjct: 1   MASRTFFLTFS---RNRGFLNQNFKAIPVFSEVSVSNYCSHGALRSESFDESVNSEETND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           LKSRIFRLRLPKRSATNVLQRWMSEGNQV+ITELR+ISKELRR+QRYKHALEILEWMVTH
Sbjct: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVTITELRNISKELRRIQRYKHALEILEWMVTH 120

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
           N+FELSDSDFA+RIDLMTKVFGIDAAERYFEGLP  +KTCETYTALLHSFAGSKLTEKAE
Sbjct: 121 NEFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLTEKAE 180

Query: 181 IIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSL 240
            +Y +I E ++PLTALPFNEMMTLYMSVG VEKVSSI+DDLKQR VH DIFTYNLWISSL
Sbjct: 181 SLYAKIMELDIPLTALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLWISSL 240

Query: 241 AAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQR 300
           A ALNIDGVR++L+EM   PNSN DWVRYIDLVNIYV SAHLLHSG NS+VESESGI+QR
Sbjct: 241 AGALNIDGVRQILNEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESGISQR 300

Query: 301 EWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLL+ILYAGLGNKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360

Query: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKPIEA 410
           DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKA++FV LLIQKNC+P EA
Sbjct: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 406

[Close]
BLAST of Lcy08g000450 vs. NCBI nr
Match: XP_038888935.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X3 [Benincasa hispida])

HSP 1 Score: 713.4 bits (1840), Expect = 1.1e-201
Identity = 356/409 (87.04%), Postives = 382/409 (93.40%), Query Frame = 0 

Query: 1   MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESND 60
           MASRT FLT S     RGFLN++FKA PVF+E SVSNYCSHGALRSESF+ESVNSEE+ND
Sbjct: 1   MASRTFFLTFS-----RGFLNQNFKAIPVFSEVSVSNYCSHGALRSESFDESVNSEETND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           LKSRIFRLRLPKRSATNVLQRWMSEGNQV+ITELR+ISKELRR+QRYKHALEILEWMVTH
Sbjct: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVTITELRNISKELRRIQRYKHALEILEWMVTH 120

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
           N+FELSDSDFA+RIDLMTKVFGIDAAERYFEGLP  +KTCETYTALLHSFAGSKLTEKAE
Sbjct: 121 NEFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLTEKAE 180

Query: 181 IIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSL 240
            +Y +I E ++PLTALPFNEMMTLYMSVG VEKVSSI+DDLKQR VH DIFTYNLWISSL
Sbjct: 181 SLYAKIMELDIPLTALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLWISSL 240

Query: 241 AAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQR 300
           A ALNIDGVR++L+EM   PNSN DWVRYIDLVNIYV SAHLLHSG NS+VESESGI+QR
Sbjct: 241 AGALNIDGVRQILNEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESGISQR 300

Query: 301 EWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLL+ILYAGLGNKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360

Query: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKPIEA 410
           DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKA++FV LLIQKNC+P EA
Sbjct: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 404

[Close]
BLAST of Lcy08g000450 vs. NCBI nr
Match: XP_038888936.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X4 [Benincasa hispida])

HSP 1 Score: 709.9 bits (1831), Expect = 1.3e-200
Identity = 350/396 (88.38%), Postives = 376/396 (94.95%), Query Frame = 0 

Query: 14  FRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESNDLKSRIFRLRLPKR 73
           FRNRGFLN++FKA PVF+E SVSNYCSHGALRSESF+ESVNSEE+NDLKSRIFRLRLPKR
Sbjct: 4   FRNRGFLNQNFKAIPVFSEVSVSNYCSHGALRSESFDESVNSEETNDLKSRIFRLRLPKR 63

Query: 74  SATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTHNKFELSDSDFAVR 133
           SATNVLQRWMSEGNQV+ITELR+ISKELRR+QRYKHALEILEWMVTHN+FELSDSDFA+R
Sbjct: 64  SATNVLQRWMSEGNQVTITELRNISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIR 123

Query: 134 IDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAEIIYERIKETEVPL 193
           IDLMTKVFGIDAAERYFEGLP  +KTCETYTALLHSFAGSKLTEKAE +Y +I E ++PL
Sbjct: 124 IDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLTEKAESLYAKIMELDIPL 183

Query: 194 TALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSLAAALNIDGVRRVL 253
           TALPFNEMMTLYMSVG VEKVSSI+DDLKQR VH DIFTYNLWISSLA ALNIDGVR++L
Sbjct: 184 TALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLWISSLAGALNIDGVRQIL 243

Query: 254 DEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQREWITYDLLVILYA 313
           +EM   PNSN DWVRYIDLVNIYV SAHLLHSG NS+VESESGI+QREWITYDLL+ILYA
Sbjct: 244 NEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESGISQREWITYDLLIILYA 303

Query: 314 GLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDV 373
           GLGNKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDV
Sbjct: 304 GLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDV 363

Query: 374 SACNRLVNAFVEAGLNEKASSFVNLLIQKNCKPIEA 410
           SACNRLVNAFVEAGLNEKA++FV LLIQKNC+P EA
Sbjct: 364 SACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 399

[Close]
BLAST of Lcy08g000450 vs. NCBI nr
Match: XP_008455132.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 707.2 bits (1824), Expect = 8.2e-200
Identity = 346/409 (84.60%), Postives = 386/409 (94.38%), Query Frame = 0 

Query: 1   MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESND 60
           MASRTLFL  SRKFRNRGFLN+SFK+ PVFNEA++SNYCSHGALRSESF++SVNSEE ND
Sbjct: 1   MASRTLFLAFSRKFRNRGFLNQSFKSIPVFNEANISNYCSHGALRSESFDDSVNSEEFND 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           LKSRIF+LRLPKRSA  VL+RW SEGNQV+ITELR+ISKELR++QRYKHALEILEWMVTH
Sbjct: 61  LKSRIFQLRLPKRSAIRVLERWTSEGNQVTITELRNISKELRKIQRYKHALEILEWMVTH 120

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
           NK +LSDSDFA+RIDLMTKVFG+DAAERYFEGLPI AKTCETYTALLHSFAGSKLT+KAE
Sbjct: 121 NKSDLSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 180

Query: 181 IIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSL 240
            +YE+IKE+++PLTALPFNEMMTLY S+G VEKVSSIVDDLKQ+ VH DIFTYNLWISSL
Sbjct: 181 TLYEKIKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLWISSL 240

Query: 241 AAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQR 300
           AAALNIDGV+++L+EM  +PNSN +WVRYI+LVNIY+ SA+LLHSGSNSVVES SGI+QR
Sbjct: 241 AAALNIDGVKQILNEMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASGISQR 300

Query: 301 EWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLL+ILYAGLGNKD+IDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 360

Query: 361 DQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKPIEA 410
           DQWKQSTTTDFD+S+CNRLVNAFVEAGLNEKA+SFVN+LIQKNC P  A
Sbjct: 361 DQWKQSTTTDFDISSCNRLVNAFVEAGLNEKANSFVNVLIQKNCDPTVA 409

[Close]
BLAST of Lcy08g000450 vs. TAIR 10
Match: AT5G09450.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 451.4 bits (1160), Expect = 7.5e-127
Identity = 231/405 (57.04%), Postives = 303/405 (74.81%), Query Frame = 0 

Query: 1   MASRTLFLTLSRKFRNRGFLNRSFKATPVFNEASVSNYCSHGALRSESFEESVNSEESND 60
           MA+R+LF +L  +  N G L  +F      +  S S Y +  A+ +   EE   SEE +D
Sbjct: 1   MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRFSKS-YNADAAIGNSLVEE---SEEKDD 60

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           LKSRIFRLRLPKRSAT VL++W+ EGNQ++I ELR ISKELRR +RYKHALE+ EWMV H
Sbjct: 61  LKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH 120

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
            + ++SD+D+A RIDL++KVFGIDAAERYFEGL I +KT ETYT+LLH++A SK TE+AE
Sbjct: 121 EESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAE 180

Query: 181 IIYERIKETE-VPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISS 240
            +++RI E++ +   A+ +NEMMTLYMSVG VEKV  +++ LKQ+KV  DIFTYNLW+SS
Sbjct: 181 ALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSS 240

Query: 241 LAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGITQ 300
            AA  NID +R++L+EM+ D +SN  WVRYIDL +IY+ S+ + ++ S   VE+E  I+Q
Sbjct: 241 CAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQ 300

Query: 301 REWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEV 360
           REWITYD L+IL+ GLGNK  IDQIW+SLR T Q ++SR+YIC+LS YLML HL+E  E+
Sbjct: 301 REWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEI 360

Query: 361 IDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNC 405
           I QWK+S TT+FD SAC R++NAF + GL   AS F  +L+   C
Sbjct: 361 IHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKC 401

[Close]
BLAST of Lcy08g000450 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-54
Identity = 114/361 (31.58%), Postives = 205/361 (56.79%), Query Frame = 0 

Query: 51  ESVNSEES-----NDLKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQ 110
           ES N +E+     + L  R+  L   KRSA   +++W  EG+ V   EL  I +ELR+++
Sbjct: 48  ESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIK 107

Query: 111 RYKHALEILEWMVTHNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTA 170
           RYKHALEI EWMV     +L   D+AV +DL++K+ G+++AE++FE +P   +     T+
Sbjct: 108 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 167

Query: 171 LLHSFAGSKLTEKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRK 230
           LLHS+  +KL++KAE ++E++ E     + LP+N M+++Y+S G  EKV  ++ +LK R 
Sbjct: 168 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR- 227

Query: 231 VHTDIFTYNLWISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHS 290
              DI TYNLW+++ A+  +++G  +V  + K +   N DWV Y  L N+Y  + + +  
Sbjct: 228 TSPDIVTYNLWLTAFASGNDVEGAEKVYLKAK-EEKLNPDWVTYSVLTNLYAKTDN-VEK 287

Query: 291 GSNSVVESESGITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILS 350
              ++ E E  ++++  + Y  L+ L+A LG+KD ++  W+ ++ + +KM    Y+ ++S
Sbjct: 288 ARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMIS 347

Query: 351 CYLMLDHLKEIGEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCK 407
             + L   ++   + D+W+  + T  D    N ++  ++          F   +++K   
Sbjct: 348 AVVKLGEFEQAKGLYDEWESVSGTG-DARIPNLILAEYMNRDEVLLGEKFYERIVEKGIN 404

[Close]
BLAST of Lcy08g000450 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 8.0e-52
Identity = 106/343 (30.90%), Postives = 187/343 (54.52%), Query Frame = 0 

Query: 61  LKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMVTH 120
           L+ R+ R   P  S   VL  W+ +GN V  +EL  I K LR+  R+ HAL+I +WM  H
Sbjct: 40  LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEH 99

Query: 121 NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTEKAE 180
              E+S+ D A+R+DL+ KV G+  AE++FE +P+  +    Y ALL+ +A  K+  KAE
Sbjct: 100 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 159

Query: 181 IIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWISSL 240
            +++ +KE       LP+N M+ LY+  G    V  ++ +++   V  DIFT N  + + 
Sbjct: 160 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAY 219

Query: 241 AAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGI-TQ 300
           +   +++G+ + L   + D   ++DW  Y D  N Y+  A L       + +SE  +  Q
Sbjct: 220 SVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYI-KAGLTEKALEMLRKSEQMVNAQ 279

Query: 301 REWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEV 360
           +    Y++L+  Y   G K+++ ++W SL        +  YI ++S  L +D ++E+ ++
Sbjct: 280 KRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKI 339

Query: 361 IDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQK 403
           +++W+   +  FD+   + L+  + + G+ EKA   VN+L+QK
Sbjct: 340 MEEWEAGHSL-FDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379

[Close]
BLAST of Lcy08g000450 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 191.4 bits (485), Expect = 1.4e-48
Identity = 116/354 (32.77%), Postives = 185/354 (52.26%), Query Frame = 0 

Query: 59  NDLKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMV 118
           N LK  I R   P+RS T++LQ  +  G+ VS++ELR ISK L R  RY  AL+++EWM 
Sbjct: 39  NSLK-EILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWME 98

Query: 119 THNKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTC-----ETYTALLHSFAGS 178
                E S  D A+R+DL+ K  G+   E YFE L +H+          Y  LL ++  +
Sbjct: 99  NQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKL-LHSSVSMRVAKSAYLPLLRAYVKN 158

Query: 179 KLTEKAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTY 238
           K+ ++AE + E++      +T  PFNEMM LY + G  EKV  +V  +K  K+  ++ +Y
Sbjct: 159 KMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSY 218

Query: 239 NLWISSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVE- 298
           NLW+++      +  V  V  EM  D +  V W     L N+Y+ S       +  V+E 
Sbjct: 219 NLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSG--FDEKARLVLED 278

Query: 299 SESGITQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDH 358
           +E  + +   + Y  L+ LYA LGNK+ + ++W   +    +++  NYIC+LS  +    
Sbjct: 279 AEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGD 338

Query: 359 LKEIGEVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKP 407
           L+E   V  +W ++   ++DV   N L+ A+V  G   KA S    ++++   P
Sbjct: 339 LEEAERVFSEW-EAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTP 387

[Close]
BLAST of Lcy08g000450 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 184.5 bits (467), Expect = 1.7e-46
Identity = 103/349 (29.51%), Postives = 189/349 (54.15%), Query Frame = 0 

Query: 59  NDLKSRIFRLRLPKRSATNVLQRWMSEGNQVSITELRHISKELRRVQRYKHALEILEWMV 118
           N +  +I  +  P+  A +VL +W   G +++  EL  + KELR+ +R   ALE+ +WM 
Sbjct: 67  NAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMN 126

Query: 119 TH-NKFELSDSDFAVRIDLMTKVFGIDAAERYFEGLPIHAKTCETYTALLHSFAGSKLTE 178
               +F LS SD A+++DL+ KV GI  AE +F  LP + K    Y +LL+++  +K  E
Sbjct: 127 NRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSRE 186

Query: 179 KAEIIYERIKETEVPLTALPFNEMMTLYMSVGLVEKVSSIVDDLKQRKVHTDIFTYNLWI 238
           KAE +   +++    L  LPFN MMTLYM++   +KV ++V ++KQ+ +  DI++YN+W+
Sbjct: 187 KAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWL 246

Query: 239 SSLAAALNIDGVRRVLDEMKCDPNSNVDWVRYIDLVNIYVTSAHLLHSGSNSVVESESGI 298
           SS  +  +++ +  V  +MK D +   +W  +  +  +Y+          +++ + E+ I
Sbjct: 247 SSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGE-TEKAEDALRKVEARI 306

Query: 299 TQREWITYDLLVILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIG 358
           T R  I Y  L+ LY  LGNK ++ ++W   +     + +  Y  ++S  + +  ++   
Sbjct: 307 TGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAE 366

Query: 359 EVIDQWKQSTTTDFDVSACNRLVNAFVEAGLNEKASSFVNLLIQKNCKP 407
           +V ++W     + +D    N L+NA+V+    E A    + +++   KP
Sbjct: 367 KVYEEW-LPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKP 413

The following BLAST results are available for this feature:
BLAST of Lcy08g000450 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94B591.1e-12557.04Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidop... [more]
Q9SY071.9e-5331.58Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
Q9SKU61.1e-5030.90Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
Q3E9112.0e-4732.77Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX... [more]
Q8LPS62.4e-4529.51Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX... [more]
BLAST of Lcy08g000450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C0B74.0e-20084.60pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ... [more]
A0A6J1I8J25.7e-19985.57pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ... [more]
A0A6J1GLW97.5e-19986.06pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ... [more]
A0A0A0K6491.3e-19884.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066290 PE=4 SV=1[more]
A0A5D3C6J09.1e-19783.86Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Lcy08g000450 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038888933.17.6e-20688.02pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ... [more]
XP_038888934.14.6e-20387.53pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 ... [more]
XP_038888935.11.1e-20187.04pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X3 ... [more]
XP_038888936.11.3e-20088.38pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X4 ... [more]
XP_008455132.18.2e-20084.60PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial ... [more]
BLAST of Lcy08g000450 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G09450.17.5e-12757.04Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G02820.11.3e-5431.58Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G20710.18.0e-5230.90Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G27460.11.4e-4832.77Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G02150.11.7e-4629.51Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 231..258
e-value: 0.023
score: 14.9
coord: 162..188
e-value: 0.16
score: 12.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 372..406
score: 9.086975
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 294..411
e-value: 4.7E-6
score: 28.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 202..292
e-value: 3.3E-8
score: 35.1
coord: 55..201
e-value: 8.0E-10
score: 40.3
NoneNo IPR availablePANTHERPTHR45717OS12G0527900 PROTEINcoord: 1..407
NoneNo IPR availablePANTHERPTHR45717:SF4BNAC02G00860D PROTEINcoord: 1..407

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g000450.1Lcy08g000450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding