Lcy08g000080 (gene) Sponge gourd (P93075) v1

Overview
NameLcy08g000080
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionGYF domain-containing protein
LocationChr08: 287071 .. 290079 (+)
RNA-Seq ExpressionLcy08g000080
SyntenyLcy08g000080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGGGTTGGCGCAAGGAATATCCTTTTGTGATTTCTTTTTATTGTGGACTCTCATAACAAACATATGCACAGATGCCCATCATACATTTTACTATAAGTCAAATTCACTTTAGCTAGCATATTCATCATATTTACTGTATTCAGTATTCCAAGTGTTGTTTTTGTTGCATTGCTGCTATAGTTAGATAATTATTATTCATTATCGATAAAGGATGCATCTGAAGTCTATAGTTCACGATTGATGTTAATGTCTATTTCCTCTCTAATCCTCTAATAATAGATTTTTCTCTACTTTGCATCTATTTGGTATTAGAGCTTGATCCTTGTTTCTCTTATCTCTCAATGGTTTTTCCAGTCTTTTTTTTTTAACAAGATACGAAACTTTTCATTGATAAATGAAAAGAGACTAATGCTCAAGGATACAAAGCCCACAAAGGAGTGGAATAAGAACAAAGGGACAAAAAAGCAACCCAACAAACAATAATAAACTAAAAGAAAACTCCAATAAATAACAAGAAAAAACTAACGAGCAAGCAAATGCAAAGGAAAAATTTGCAACAAAACAGATTTAGAAGCCAAAAATAACTCAGAAGGCAGCCCCCTATCCCACATGGTACAGAGAAGAGAACAAAAGAAGCTTCTAATCCAACGATTCCTGCAACTCTTTTAACCCTCCACACAAAGTACTCTTTAACCAACCAGAGAACATGCTTTTTGGCCCACGAAAAAAGAACCTTCAGGAAGAGGAACTCTGCTCAAAGACTGAATTAAGAAAAGAAGCCCATCTTCGGGCCTCAACCTCCCAATTTGACTGGAAATAAATCTCCCCTGCATAATAACTGAATTTAATTCTTATTGCTCACCAACCAAAATTTGATTGGAGATGAATTCTCCCCATGCACAACTACCGAAATTAATCCTTTTGCTCACCAACTGAAATCTGACTGGAAATAAATGCTTTCCATGCACAACTACCAAAATTAATTCCTTTTGCTCACCAACCAAAGCAATAAATCAATCCCCATGCATGAAAAATGAAACAACTTCCTCATGCAAAAGGTTACTGGAAATAAATTGTTTTTTCAGTCATGTTAAACGGCAGTGTTTCACTGTTTCTTTGTGCTCAAACGATCCGTCAATTCAAAGTCAATCATTTCAAAATTCAAGAGTAAATTTTATTACATGAAGTTTCTTCAGAAATCAAGCTTAAATATAATTTAATATTATCGTAAATTATATGTCTAAAATAATTTTATATGGTTCTTATGGTGGTTATAAGTATAACATAAGCAGTTCCTTCCCATTGCATCTCTCTGTAGACAACATTTTTATATAATGAGAGCATGTCTCTTCTTATTATGTAATAGTCTCAACCTATTTTCTAATTTGCTGATTACAAAAATATGCCTGTCAGCTATAGTACGTTGCTTCTTGATGGCTATATTTTTGCTTCGATTTTGACCAACTTGATTGACTCAAAACATGGTTGACTGAGTATATGCAGTGGTTTAAACAACGAAGCATAATGTTTTTATATTTTAATTTATCCTGTTGGACTTCTTTACTGAAATTGGGCAACTGCTTAAGAAATTTGAGAAATAACTGCAAGGATTATTAGCAACTGCTTCTGGGAACTATAGGCTATACATCTTTAAGAGAAGTGATTGGGTGAATGGAATGATTTTAGGAGTTCAGTACAATGGTTTATTATGTTTAGAACGTGTACTTTGGAAATTTGATTGATTACGATTTTGGAGCTGTTCTTCTCTTTTTTTGTTTTTTACCTCTTCTGGTTTTGGCATATCAACATCATACCATATTATGCTTATCATGACTATAGCTTCTGATCTTAGTGACACTTGGAAATAAGATTGCCGAAAAGGCTAAAAGAATACAAATGAGCCTTAACTGATTTGATGTACGCTTGACCAATATCTGGAGAAAAAGCAGCTCCTTCAGACTGCCGAAGAACAGTCTCGCATATTGCGTGAAATTCCACGAGTGATTGCAGATGAAACAGAATTTAAAGGCATTTATGTTGGTGGAAATCAAGGAGATCGTGTCACTAACGAAGGAGATGAAACAAGATTGCAGATGAGAAATGAGGTTTCAGATGATACAAGTCATGGAGAAACTGTACCTAGTTCAAACCCAAATGTTGTTATTTATGTTGCACAAAACAGAACTGCAGCTTTGATGTCCAACATGAAAGAATTTGCAGGTTTGCATCTTTATTTATAATCTCGGCCTTAATTTCTGTGTGAAGATTTTGATATAGCATCTAGCTGTTTGAGCCTACCCTTGGACTAAGGTATTTTTATCTAATCTCGGGGATTGAAGGGCAAGGGTTTTTGACTAATTTCTGTGTGAATGTTTTAATCCAATCTTCAATGACTAGTACACCTACGGTTATTAGCTTTCGTATTATCCATTTCCATGTGAAATATTGTTTGAAAAAGAATGAATTTCTAGACCAGAGTTCGTTTTATTGATCATCAACCCCGGGCTTTCAGGTTACAGAAAATGTCGGTAGAGATCCTAAGACCAAATAGCTTATTGGAAGAAAACAAGCTAGATGGCATGTGAACTGATTACTTTCTATCATGATCTTGTTGCAGAATCTAGACAGAGTGTTCTTGATGAAGAACAGCCCCCACATCCGGTAGAATCTACGTATAATAGCTTTAATGAGACAGAACTTATAAATCAGGTGGAGAAAGGCTGTCAAGCGAATGAGCAGATTAAAGAATCTAGAGTGATAAATTTGAGCGATGATGATGAACCACCTAGGGCTGAAGAGCATGATGGGAATAACAAACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGATGTTCAAGGGCCCTTTTGTCTTGCGTCGTTGAAAAATTGGAAGGATGCTGACTATTTTCCTTCAGATTTCAAAGTCTGGAAGACGGGTCAGACTCGAGATCAAGCTGTTTTATTGAGCGACATTCTTTCCCCCTTCTTTTCATGA

mRNA sequence

ATGAAAAGGACTGCCGAAGAACAGTCTCGCATATTGCGTGAAATTCCACGAGTGATTGCAGATGAAACAGAATTTAAAGGCATTTATGTTGGTGGAAATCAAGGAGATCGTGTCACTAACGAAGGAGATGAAACAAGATTGCAGATGAGAAATGAGGTTTCAGATGATACAAGTCATGGAGAAACTGTACCTAGTTCAAACCCAAATGTTGTTATTTATGTTGCACAAAACAGAACTGCAGCTTTGATGTCCAACATGAAAGAATTTGCAGAATCTAGACAGAGTGTTCTTGATGAAGAACAGCCCCCACATCCGGTAGAATCTACGTATAATAGCTTTAATGAGACAGAACTTATAAATCAGGTGGAGAAAGGCTGTCAAGCGAATGAGCAGATTAAAGAATCTAGAGTGATAAATTTGAGCGATGATGATGAACCACCTAGGGCTGAAGAGCATGATGGGAATAACAAACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGATGTTCAAGGGCCCTTTTGTCTTGCGTCGTTGAAAAATTGGAAGGATGCTGACTATTTTCCTTCAGATTTCAAAGTCTGGAAGACGGGTCAGACTCGAGATCAAGCTGTTTTATTGAGCGACATTCTTTCCCCCTTCTTTTCATGA

Coding sequence (CDS)

ATGAAAAGGACTGCCGAAGAACAGTCTCGCATATTGCGTGAAATTCCACGAGTGATTGCAGATGAAACAGAATTTAAAGGCATTTATGTTGGTGGAAATCAAGGAGATCGTGTCACTAACGAAGGAGATGAAACAAGATTGCAGATGAGAAATGAGGTTTCAGATGATACAAGTCATGGAGAAACTGTACCTAGTTCAAACCCAAATGTTGTTATTTATGTTGCACAAAACAGAACTGCAGCTTTGATGTCCAACATGAAAGAATTTGCAGAATCTAGACAGAGTGTTCTTGATGAAGAACAGCCCCCACATCCGGTAGAATCTACGTATAATAGCTTTAATGAGACAGAACTTATAAATCAGGTGGAGAAAGGCTGTCAAGCGAATGAGCAGATTAAAGAATCTAGAGTGATAAATTTGAGCGATGATGATGAACCACCTAGGGCTGAAGAGCATGATGGGAATAACAAACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGATGTTCAAGGGCCCTTTTGTCTTGCGTCGTTGAAAAATTGGAAGGATGCTGACTATTTTCCTTCAGATTTCAAAGTCTGGAAGACGGGTCAGACTCGAGATCAAGCTGTTTTATTGAGCGACATTCTTTCCCCCTTCTTTTCATGA

Protein sequence

MKRTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGETVPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYNSFNETELINQVEKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFFS
Homology
BLAST of Lcy08g000080 vs. ExPASy Swiss-Prot
Match: Q9FT92 (Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 75/238 (31.51%), Postives = 104/238 (43.70%), Query Frame = 0

Query: 6   EEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEG--DETRLQMRNEV--------SD 65
           +EQ+R+LRE+P VI +E   +   V   +  +  NE    E+ L   +E          +
Sbjct: 316 DEQARLLREVPEVIGEEL-VQNPEVSSPEAHKSDNEQRLSESPLSCIHETPEARNLFGGE 375

Query: 66  DTSHGETVPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVL--DEEQPPHPV------- 125
           D         SNP     +    T          A +    L  D EQP + +       
Sbjct: 376 DQQFNNGYVMSNPITTPGITSCATEINKGLPTWIASAGAEYLHVDVEQPANGIIGGETPT 435

Query: 126 -ESTYNSFNETELINQVEKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKL------- 185
            ES  +    +  +N V+ G Q   Q   S VI LSDDDE    +    + K+       
Sbjct: 436 EESKVSQLQSSIPVNNVDNGSQV--QPNPSEVIELSDDDEDDNGDGETLDPKVEDVRVLS 495

Query: 186 ---RSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPSDFKVWKTGQTRDQAVLLSDIL 214
                L W Y DPQG VQGPF L  LK W DA+YF   F+VW TG++ + AVLL+D+L
Sbjct: 496 YDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVWMTGESMESAVLLTDVL 550

BLAST of Lcy08g000080 vs. ExPASy Swiss-Prot
Match: Q9SIV5 (Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NERD PE=1 SV=3)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 162  IWYYLDPQGDVQGPFCLASLKNWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFF 218
            IW+Y DP G VQGPF +A L+ W +  YFP+  ++WK  ++   +VLL+D L+  F
Sbjct: 1309 IWHYKDPSGKVQGPFSMAQLRKWNNTGYFPAKLEIWKANESPLDSVLLTDALAGLF 1364

BLAST of Lcy08g000080 vs. ExPASy Swiss-Prot
Match: Q9SD34 (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN=At3g51120 PE=2 SV=3)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 0

Query: 151 EHDGNNKLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPSDFKVWKTGQTRDQAVLLS 210
           +  G +   S IW+Y DP G  QGPF +  L+ WK + +FP   ++W+  + +D++VLL+
Sbjct: 707 QETGKDDEESEIWHYRDPTGKTQGPFSMVQLRRWKSSGHFPPYLRIWRAHENQDESVLLT 766

Query: 211 DILSPFF 218
           D L+  F
Sbjct: 767 DALAGRF 773

BLAST of Lcy08g000080 vs. ExPASy Swiss-Prot
Match: Q5U236 (GRB10-interacting GYF protein 2 OS=Xenopus laevis OX=8355 GN=gigyf2 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.5e-04
Identity = 29/76 (38.16%), Postives = 36/76 (47.37%), Query Frame = 0

Query: 123 EKGCQANEQIKESRVINLSD---DDEPPRAEEHDGNNKLRSL----IWYYLDPQGDVQGP 182
           E G +  EQ  +  V  L D   DD+    +  D   K  SL     WYY DPQG++QGP
Sbjct: 444 EDGLEHLEQQAQQMVAYLQDGTLDDDHLLTKVLDQRVKGPSLDNQQKWYYKDPQGEIQGP 503

Query: 183 FCLASLKNWKDADYFP 192
           F    +  W  A YFP
Sbjct: 504 FSNREMAEWYQAGYFP 519

BLAST of Lcy08g000080 vs. ExPASy TrEMBL
Match: A0A6J1D1W3 (uncharacterized protein At5g08430 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91
Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0

Query: 3   RTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGET 62
           +TAEEQSRILREIP+VIADETE K IYV  +QGD VTNEGDET+LQMR E  DDT+ G+T
Sbjct: 226 QTAEEQSRILREIPQVIADETELKSIYVSADQGDNVTNEGDETKLQMRGEALDDTNQGDT 285

Query: 63  VPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYNSFNETELINQV 122
           VP+S+  +  YVA+N TAALMSN+KE AESRQ VLDEEQPP PVESTYN  NETE++N+V
Sbjct: 286 VPNSSQKIAFYVAENGTAALMSNIKEVAESRQGVLDEEQPPKPVESTYNCNNETEIMNEV 345

Query: 123 EKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASLK 182
           EKGCQA+E+IKES VINLSDDDE PR EEHD   KLRSLIWYYLDPQGDVQGPF LASLK
Sbjct: 346 EKGCQASERIKESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLK 405

Query: 183 NWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 219
           NWKDADYFPSDFKVWKTGQ +D+AVLLSDILSPFFS
Sbjct: 406 NWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFFS 441

BLAST of Lcy08g000080 vs. ExPASy TrEMBL
Match: A0A6J1D418 (uncharacterized protein At5g08430 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91
Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0

Query: 3   RTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGET 62
           +TAEEQSRILREIP+VIADETE K IYV  +QGD VTNEGDET+LQMR E  DDT+ G+T
Sbjct: 329 QTAEEQSRILREIPQVIADETELKSIYVSADQGDNVTNEGDETKLQMRGEALDDTNQGDT 388

Query: 63  VPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYNSFNETELINQV 122
           VP+S+  +  YVA+N TAALMSN+KE AESRQ VLDEEQPP PVESTYN  NETE++N+V
Sbjct: 389 VPNSSQKIAFYVAENGTAALMSNIKEVAESRQGVLDEEQPPKPVESTYNCNNETEIMNEV 448

Query: 123 EKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASLK 182
           EKGCQA+E+IKES VINLSDDDE PR EEHD   KLRSLIWYYLDPQGDVQGPF LASLK
Sbjct: 449 EKGCQASERIKESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLK 508

Query: 183 NWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 219
           NWKDADYFPSDFKVWKTGQ +D+AVLLSDILSPFFS
Sbjct: 509 NWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFFS 544

BLAST of Lcy08g000080 vs. ExPASy TrEMBL
Match: A0A6J1D2W8 (uncharacterized protein At5g08430 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91
Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0

Query: 3   RTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGET 62
           +TAEEQSRILREIP+VIADETE K IYV  +QGD VTNEGDET+LQMR E  DDT+ G+T
Sbjct: 271 QTAEEQSRILREIPQVIADETELKSIYVSADQGDNVTNEGDETKLQMRGEALDDTNQGDT 330

Query: 63  VPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYNSFNETELINQV 122
           VP+S+  +  YVA+N TAALMSN+KE AESRQ VLDEEQPP PVESTYN  NETE++N+V
Sbjct: 331 VPNSSQKIAFYVAENGTAALMSNIKEVAESRQGVLDEEQPPKPVESTYNCNNETEIMNEV 390

Query: 123 EKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASLK 182
           EKGCQA+E+IKES VINLSDDDE PR EEHD   KLRSLIWYYLDPQGDVQGPF LASLK
Sbjct: 391 EKGCQASERIKESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLK 450

Query: 183 NWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 219
           NWKDADYFPSDFKVWKTGQ +D+AVLLSDILSPFFS
Sbjct: 451 NWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFFS 486

BLAST of Lcy08g000080 vs. ExPASy TrEMBL
Match: A0A6J1D317 (uncharacterized protein At5g08430 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91
Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0

Query: 3   RTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGET 62
           +TAEEQSRILREIP+VIADETE K IYV  +QGD VTNEGDET+LQMR E  DDT+ G+T
Sbjct: 312 QTAEEQSRILREIPQVIADETELKSIYVSADQGDNVTNEGDETKLQMRGEALDDTNQGDT 371

Query: 63  VPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYNSFNETELINQV 122
           VP+S+  +  YVA+N TAALMSN+KE AESRQ VLDEEQPP PVESTYN  NETE++N+V
Sbjct: 372 VPNSSQKIAFYVAENGTAALMSNIKEVAESRQGVLDEEQPPKPVESTYNCNNETEIMNEV 431

Query: 123 EKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASLK 182
           EKGCQA+E+IKES VINLSDDDE PR EEHD   KLRSLIWYYLDPQGDVQGPF LASLK
Sbjct: 432 EKGCQASERIKESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLK 491

Query: 183 NWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 219
           NWKDADYFPSDFKVWKTGQ +D+AVLLSDILSPFFS
Sbjct: 492 NWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFFS 527

BLAST of Lcy08g000080 vs. ExPASy TrEMBL
Match: A0A6J1HZR7 (uncharacterized protein At5g08430 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468398 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.4e-90
Identity = 175/215 (81.40%), Postives = 189/215 (87.91%), Query Frame = 0

Query: 3   RTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGET 62
           +TAEEQSRI REIP+VIADE EF+GIY   NQGD VTNEGDET+LQ+R EVSDDT+ GET
Sbjct: 329 QTAEEQSRIFREIPQVIADEPEFQGIYGSANQGDNVTNEGDETKLQVRREVSDDTNQGET 388

Query: 63  VPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYN-SFNETELINQ 122
           V  SNPNV IYVA+NRTAA MSN++EFAE R+SVLDEEQPP PVESTYN S NETELIN+
Sbjct: 389 VFGSNPNVDIYVAENRTAASMSNVEEFAECRRSVLDEEQPPQPVESTYNSSLNETELINE 448

Query: 123 VEKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASL 182
           V+KG  ANEQIKESRVINLSDDDE PR EE D N+ LRSLIWYYLDPQGDVQGPFCLASL
Sbjct: 449 VDKGWLANEQIKESRVINLSDDDELPRGEELDWNSTLRSLIWYYLDPQGDVQGPFCLASL 508

Query: 183 KNWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPF 217
           KNWKDADYFP DFKVWK GQT+DQAVLLSDILS F
Sbjct: 509 KNWKDADYFPPDFKVWKMGQTQDQAVLLSDILSHF 543

BLAST of Lcy08g000080 vs. NCBI nr
Match: XP_022148065.1 (uncharacterized protein At5g08430 isoform X4 [Momordica charantia])

HSP 1 Score: 345.9 bits (886), Expect = 2.5e-91
Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0

Query: 3   RTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGET 62
           +TAEEQSRILREIP+VIADETE K IYV  +QGD VTNEGDET+LQMR E  DDT+ G+T
Sbjct: 226 QTAEEQSRILREIPQVIADETELKSIYVSADQGDNVTNEGDETKLQMRGEALDDTNQGDT 285

Query: 63  VPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYNSFNETELINQV 122
           VP+S+  +  YVA+N TAALMSN+KE AESRQ VLDEEQPP PVESTYN  NETE++N+V
Sbjct: 286 VPNSSQKIAFYVAENGTAALMSNIKEVAESRQGVLDEEQPPKPVESTYNCNNETEIMNEV 345

Query: 123 EKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASLK 182
           EKGCQA+E+IKES VINLSDDDE PR EEHD   KLRSLIWYYLDPQGDVQGPF LASLK
Sbjct: 346 EKGCQASERIKESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLK 405

Query: 183 NWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 219
           NWKDADYFPSDFKVWKTGQ +D+AVLLSDILSPFFS
Sbjct: 406 NWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFFS 441

BLAST of Lcy08g000080 vs. NCBI nr
Match: XP_022148062.1 (uncharacterized protein At5g08430 isoform X1 [Momordica charantia])

HSP 1 Score: 345.9 bits (886), Expect = 2.5e-91
Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0

Query: 3   RTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGET 62
           +TAEEQSRILREIP+VIADETE K IYV  +QGD VTNEGDET+LQMR E  DDT+ G+T
Sbjct: 329 QTAEEQSRILREIPQVIADETELKSIYVSADQGDNVTNEGDETKLQMRGEALDDTNQGDT 388

Query: 63  VPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYNSFNETELINQV 122
           VP+S+  +  YVA+N TAALMSN+KE AESRQ VLDEEQPP PVESTYN  NETE++N+V
Sbjct: 389 VPNSSQKIAFYVAENGTAALMSNIKEVAESRQGVLDEEQPPKPVESTYNCNNETEIMNEV 448

Query: 123 EKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASLK 182
           EKGCQA+E+IKES VINLSDDDE PR EEHD   KLRSLIWYYLDPQGDVQGPF LASLK
Sbjct: 449 EKGCQASERIKESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLK 508

Query: 183 NWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 219
           NWKDADYFPSDFKVWKTGQ +D+AVLLSDILSPFFS
Sbjct: 509 NWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFFS 544

BLAST of Lcy08g000080 vs. NCBI nr
Match: XP_022148063.1 (uncharacterized protein At5g08430 isoform X2 [Momordica charantia])

HSP 1 Score: 345.9 bits (886), Expect = 2.5e-91
Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0

Query: 3   RTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGET 62
           +TAEEQSRILREIP+VIADETE K IYV  +QGD VTNEGDET+LQMR E  DDT+ G+T
Sbjct: 312 QTAEEQSRILREIPQVIADETELKSIYVSADQGDNVTNEGDETKLQMRGEALDDTNQGDT 371

Query: 63  VPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYNSFNETELINQV 122
           VP+S+  +  YVA+N TAALMSN+KE AESRQ VLDEEQPP PVESTYN  NETE++N+V
Sbjct: 372 VPNSSQKIAFYVAENGTAALMSNIKEVAESRQGVLDEEQPPKPVESTYNCNNETEIMNEV 431

Query: 123 EKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASLK 182
           EKGCQA+E+IKES VINLSDDDE PR EEHD   KLRSLIWYYLDPQGDVQGPF LASLK
Sbjct: 432 EKGCQASERIKESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLK 491

Query: 183 NWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 219
           NWKDADYFPSDFKVWKTGQ +D+AVLLSDILSPFFS
Sbjct: 492 NWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFFS 527

BLAST of Lcy08g000080 vs. NCBI nr
Match: XP_022148064.1 (uncharacterized protein At5g08430 isoform X3 [Momordica charantia])

HSP 1 Score: 345.9 bits (886), Expect = 2.5e-91
Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0

Query: 3   RTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGET 62
           +TAEEQSRILREIP+VIADETE K IYV  +QGD VTNEGDET+LQMR E  DDT+ G+T
Sbjct: 271 QTAEEQSRILREIPQVIADETELKSIYVSADQGDNVTNEGDETKLQMRGEALDDTNQGDT 330

Query: 63  VPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYNSFNETELINQV 122
           VP+S+  +  YVA+N TAALMSN+KE AESRQ VLDEEQPP PVESTYN  NETE++N+V
Sbjct: 331 VPNSSQKIAFYVAENGTAALMSNIKEVAESRQGVLDEEQPPKPVESTYNCNNETEIMNEV 390

Query: 123 EKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASLK 182
           EKGCQA+E+IKES VINLSDDDE PR EEHD   KLRSLIWYYLDPQGDVQGPF LASLK
Sbjct: 391 EKGCQASERIKESGVINLSDDDEQPRFEEHDWGIKLRSLIWYYLDPQGDVQGPFSLASLK 450

Query: 183 NWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFFS 219
           NWKDADYFPSDFKVWKTGQ +D+AVLLSDILSPFFS
Sbjct: 451 NWKDADYFPSDFKVWKTGQNQDEAVLLSDILSPFFS 486

BLAST of Lcy08g000080 vs. NCBI nr
Match: XP_022969376.1 (uncharacterized protein At5g08430 isoform X2 [Cucurbita maxima])

HSP 1 Score: 342.4 bits (877), Expect = 2.8e-90
Identity = 175/215 (81.40%), Postives = 189/215 (87.91%), Query Frame = 0

Query: 3   RTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGET 62
           +TAEEQSRI REIP+VIADE EF+GIY   NQGD VTNEGDET+LQ+R EVSDDT+ GET
Sbjct: 226 QTAEEQSRIFREIPQVIADEPEFQGIYGSANQGDNVTNEGDETKLQVRREVSDDTNQGET 285

Query: 63  VPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYN-SFNETELINQ 122
           V  SNPNV IYVA+NRTAA MSN++EFAE R+SVLDEEQPP PVESTYN S NETELIN+
Sbjct: 286 VFGSNPNVDIYVAENRTAASMSNVEEFAECRRSVLDEEQPPQPVESTYNSSLNETELINE 345

Query: 123 VEKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASL 182
           V+KG  ANEQIKESRVINLSDDDE PR EE D N+ LRSLIWYYLDPQGDVQGPFCLASL
Sbjct: 346 VDKGWLANEQIKESRVINLSDDDELPRGEELDWNSTLRSLIWYYLDPQGDVQGPFCLASL 405

Query: 183 KNWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPF 217
           KNWKDADYFP DFKVWK GQT+DQAVLLSDILS F
Sbjct: 406 KNWKDADYFPPDFKVWKMGQTQDQAVLLSDILSHF 440

BLAST of Lcy08g000080 vs. TAIR 10
Match: AT5G08430.1 (SWIB/MDM2 domain;Plus-3;GYF )

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18
Identity = 75/238 (31.51%), Postives = 104/238 (43.70%), Query Frame = 0

Query: 6   EEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEG--DETRLQMRNEV--------SD 65
           +EQ+R+LRE+P VI +E   +   V   +  +  NE    E+ L   +E          +
Sbjct: 316 DEQARLLREVPEVIGEEL-VQNPEVSSPEAHKSDNEQRLSESPLSCIHETPEARNLFGGE 375

Query: 66  DTSHGETVPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVL--DEEQPPHPV------- 125
           D         SNP     +    T          A +    L  D EQP + +       
Sbjct: 376 DQQFNNGYVMSNPITTPGITSCATEINKGLPTWIASAGAEYLHVDVEQPANGIIGGETPT 435

Query: 126 -ESTYNSFNETELINQVEKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKL------- 185
            ES  +    +  +N V+ G Q   Q   S VI LSDDDE    +    + K+       
Sbjct: 436 EESKVSQLQSSIPVNNVDNGSQV--QPNPSEVIELSDDDEDDNGDGETLDPKVEDVRVLS 495

Query: 186 ---RSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPSDFKVWKTGQTRDQAVLLSDIL 214
                L W Y DPQG VQGPF L  LK W DA+YF   F+VW TG++ + AVLL+D+L
Sbjct: 496 YDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVWMTGESMESAVLLTDVL 550

BLAST of Lcy08g000080 vs. TAIR 10
Match: AT5G23480.1 (SWIB/MDM2 domain;Plus-3;GYF )

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-12
Identity = 63/227 (27.75%), Postives = 104/227 (45.81%), Query Frame = 0

Query: 3   RTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGET 62
           +  EEQ R+L ++P V+A++ E + +   G   +  T    E   +     SD+      
Sbjct: 352 KNPEEQLRLLCDVPDVVAEKLEPEFVDDDGKLVNDATVPNPEAFTEAHQ--SDEEIQPSD 411

Query: 63  VPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYNSFNETELINQV 122
           +P S+    +      TA+  +  K+  E        E P + +    +S  E E+  +V
Sbjct: 412 LPDSSIQKTLEDQPIWTAS--AGNKDLHEDVY-----EPPANGITLNTDSITEGEMNTKV 471

Query: 123 EKGCQANEQIKES----------RVINLSDDDEPPRAEEHD---GNNKLRSLIWYYLDPQ 182
            +   +   I  S           +I LSDDD+    +++D    +   + ++W+Y  P+
Sbjct: 472 SQHQSSTPVIDLSNKTQAHSNPIEIIELSDDDDDDEKDKNDQAYQSYDPKKVMWFYEYPK 531

Query: 183 GDVQGPFCLASLKNWKDADYFPS--DFKVWKTGQTRDQAVLLSDILS 215
           G   GPF L  LK W D +YF    DFKVWKTG++   AVLL+ +LS
Sbjct: 532 GKTHGPFSLTDLKTWSDEEYFVGVPDFKVWKTGES---AVLLTKLLS 566

BLAST of Lcy08g000080 vs. TAIR 10
Match: AT2G16485.1 (nucleic acid binding;zinc ion binding;DNA binding )

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-11
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0

Query: 162  IWYYLDPQGDVQGPFCLASLKNWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFF 218
            IW+Y DP G VQGPF +A L+ W +  YFP+  ++WK  ++   +VLL+D L+  F
Sbjct: 1309 IWHYKDPSGKVQGPFSMAQLRKWNNTGYFPAKLEIWKANESPLDSVLLTDALAGLF 1364

BLAST of Lcy08g000080 vs. TAIR 10
Match: AT3G51120.1 (DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding )

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 0

Query: 151 EHDGNNKLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPSDFKVWKTGQTRDQAVLLS 210
           +  G +   S IW+Y DP G  QGPF +  L+ WK + +FP   ++W+  + +D++VLL+
Sbjct: 707 QETGKDDEESEIWHYRDPTGKTQGPFSMVQLRRWKSSGHFPPYLRIWRAHENQDESVLLT 766

Query: 211 DILSPFF 218
           D L+  F
Sbjct: 767 DALAGRF 773

BLAST of Lcy08g000080 vs. TAIR 10
Match: AT2G18090.1 (PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-10
Identity = 20/58 (34.48%), Postives = 38/58 (65.52%), Query Frame = 0

Query: 160 SLIWYYLDPQGDVQGPFCLASLKNWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFF 218
           +++W Y DP G + GPF L +L+ W  + +FP + ++W+ G+ +  ++LL+D L+  F
Sbjct: 456 NMVWLYGDPDGKIHGPFSLYNLRQWNSSGHFPPELRIWRLGEQQHSSILLTDALNGQF 513

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FT921.5e-1731.51Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 P... [more]
Q9SIV51.8e-1044.64Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q9SD342.3e-1037.31Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q5U2365.5e-0438.16GRB10-interacting GYF protein 2 OS=Xenopus laevis OX=8355 GN=gigyf2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1D1W31.2e-9179.17uncharacterized protein At5g08430 isoform X4 OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1D4181.2e-9179.17uncharacterized protein At5g08430 isoform X1 OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1D2W81.2e-9179.17uncharacterized protein At5g08430 isoform X3 OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1D3171.2e-9179.17uncharacterized protein At5g08430 isoform X2 OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1HZR71.4e-9081.40uncharacterized protein At5g08430 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
Match NameE-valueIdentityDescription
XP_022148065.12.5e-9179.17uncharacterized protein At5g08430 isoform X4 [Momordica charantia][more]
XP_022148062.12.5e-9179.17uncharacterized protein At5g08430 isoform X1 [Momordica charantia][more]
XP_022148063.12.5e-9179.17uncharacterized protein At5g08430 isoform X2 [Momordica charantia][more]
XP_022148064.12.5e-9179.17uncharacterized protein At5g08430 isoform X3 [Momordica charantia][more]
XP_022969376.12.8e-9081.40uncharacterized protein At5g08430 isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G08430.11.1e-1831.51SWIB/MDM2 domain;Plus-3;GYF [more]
AT5G23480.12.5e-1227.75SWIB/MDM2 domain;Plus-3;GYF [more]
AT2G16485.11.2e-1144.64nucleic acid binding;zinc ion binding;DNA binding [more]
AT3G51120.11.6e-1137.31DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding [more]
AT2G18090.13.1e-1034.48PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF ... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003169GYF domainSMARTSM00444gyf_5coord: 161..216
e-value: 4.2E-5
score: 33.0
IPR003169GYF domainPFAMPF02213GYFcoord: 163..203
e-value: 9.7E-13
score: 47.6
IPR003169GYF domainPROSITEPS50829GYFcoord: 160..214
score: 14.099756
IPR035445GYF-like domain superfamilyGENE3D3.30.1490.40coord: 162..218
e-value: 3.1E-23
score: 83.2
IPR035445GYF-like domain superfamilySUPERFAMILY55277GYF domaincoord: 159..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..57
NoneNo IPR availablePANTHERPTHR46851OS01G0884500 PROTEINcoord: 3..214
NoneNo IPR availablePANTHERPTHR46851:SF11OS01G0884500 PROTEINcoord: 3..214

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy08g000080.1Lcy08g000080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding