Lcy08g000080 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGGGTTGGCGCAAGGAATATCCTTTTGTGATTTCTTTTTATTGTGGACTCTCATAACAAACATATGCACAGATGCCCATCATACATTTTACTATAAGTCAAATTCACTTTAGCTAGCATATTCATCATATTTACTGTATTCAGTATTCCAAGTGTTGTTTTTGTTGCATTGCTGCTATAGTTAGATAATTATTATTCATTATCGATAAAGGATGCATCTGAAGTCTATAGTTCACGATTGATGTTAATGTCTATTTCCTCTCTAATCCTCTAATAATAGATTTTTCTCTACTTTGCATCTATTTGGTATTAGAGCTTGATCCTTGTTTCTCTTATCTCTCAATGGTTTTTCCAGTCTTTTTTTTTTAACAAGATACGAAACTTTTCATTGATAAATGAAAAGAGACTAATGCTCAAGGATACAAAGCCCACAAAGGAGTGGAATAAGAACAAAGGGACAAAAAAGCAACCCAACAAACAATAATAAACTAAAAGAAAACTCCAATAAATAACAAGAAAAAACTAACGAGCAAGCAAATGCAAAGGAAAAATTTGCAACAAAACAGATTTAGAAGCCAAAAATAACTCAGAAGGCAGCCCCCTATCCCACATGGTACAGAGAAGAGAACAAAAGAAGCTTCTAATCCAACGATTCCTGCAACTCTTTTAACCCTCCACACAAAGTACTCTTTAACCAACCAGAGAACATGCTTTTTGGCCCACGAAAAAAGAACCTTCAGGAAGAGGAACTCTGCTCAAAGACTGAATTAAGAAAAGAAGCCCATCTTCGGGCCTCAACCTCCCAATTTGACTGGAAATAAATCTCCCCTGCATAATAACTGAATTTAATTCTTATTGCTCACCAACCAAAATTTGATTGGAGATGAATTCTCCCCATGCACAACTACCGAAATTAATCCTTTTGCTCACCAACTGAAATCTGACTGGAAATAAATGCTTTCCATGCACAACTACCAAAATTAATTCCTTTTGCTCACCAACCAAAGCAATAAATCAATCCCCATGCATGAAAAATGAAACAACTTCCTCATGCAAAAGGTTACTGGAAATAAATTGTTTTTTCAGTCATGTTAAACGGCAGTGTTTCACTGTTTCTTTGTGCTCAAACGATCCGTCAATTCAAAGTCAATCATTTCAAAATTCAAGAGTAAATTTTATTACATGAAGTTTCTTCAGAAATCAAGCTTAAATATAATTTAATATTATCGTAAATTATATGTCTAAAATAATTTTATATGGTTCTTATGGTGGTTATAAGTATAACATAAGCAGTTCCTTCCCATTGCATCTCTCTGTAGACAACATTTTTATATAATGAGAGCATGTCTCTTCTTATTATGTAATAGTCTCAACCTATTTTCTAATTTGCTGATTACAAAAATATGCCTGTCAGCTATAGTACGTTGCTTCTTGATGGCTATATTTTTGCTTCGATTTTGACCAACTTGATTGACTCAAAACATGGTTGACTGAGTATATGCAGTGGTTTAAACAACGAAGCATAATGTTTTTATATTTTAATTTATCCTGTTGGACTTCTTTACTGAAATTGGGCAACTGCTTAAGAAATTTGAGAAATAACTGCAAGGATTATTAGCAACTGCTTCTGGGAACTATAGGCTATACATCTTTAAGAGAAGTGATTGGGTGAATGGAATGATTTTAGGAGTTCAGTACAATGGTTTATTATGTTTAGAACGTGTACTTTGGAAATTTGATTGATTACGATTTTGGAGCTGTTCTTCTCTTTTTTTGTTTTTTACCTCTTCTGGTTTTGGCATATCAACATCATACCATATTATGCTTATCATGACTATAGCTTCTGATCTTAGTGACACTTGGAAATAAGATTGCCGAAAAGGCTAAAAGAATACAAATGAGCCTTAACTGATTTGATGTACGCTTGACCAATATCTGGAGAAAAAGCAGCTCCTTCAGACTGCCGAAGAACAGTCTCGCATATTGCGTGAAATTCCACGAGTGATTGCAGATGAAACAGAATTTAAAGGCATTTATGTTGGTGGAAATCAAGGAGATCGTGTCACTAACGAAGGAGATGAAACAAGATTGCAGATGAGAAATGAGGTTTCAGATGATACAAGTCATGGAGAAACTGTACCTAGTTCAAACCCAAATGTTGTTATTTATGTTGCACAAAACAGAACTGCAGCTTTGATGTCCAACATGAAAGAATTTGCAGGTTTGCATCTTTATTTATAATCTCGGCCTTAATTTCTGTGTGAAGATTTTGATATAGCATCTAGCTGTTTGAGCCTACCCTTGGACTAAGGTATTTTTATCTAATCTCGGGGATTGAAGGGCAAGGGTTTTTGACTAATTTCTGTGTGAATGTTTTAATCCAATCTTCAATGACTAGTACACCTACGGTTATTAGCTTTCGTATTATCCATTTCCATGTGAAATATTGTTTGAAAAAGAATGAATTTCTAGACCAGAGTTCGTTTTATTGATCATCAACCCCGGGCTTTCAGGTTACAGAAAATGTCGGTAGAGATCCTAAGACCAAATAGCTTATTGGAAGAAAACAAGCTAGATGGCATGTGAACTGATTACTTTCTATCATGATCTTGTTGCAGAATCTAGACAGAGTGTTCTTGATGAAGAACAGCCCCCACATCCGGTAGAATCTACGTATAATAGCTTTAATGAGACAGAACTTATAAATCAGGTGGAGAAAGGCTGTCAAGCGAATGAGCAGATTAAAGAATCTAGAGTGATAAATTTGAGCGATGATGATGAACCACCTAGGGCTGAAGAGCATGATGGGAATAACAAACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGATGTTCAAGGGCCCTTTTGTCTTGCGTCGTTGAAAAATTGGAAGGATGCTGACTATTTTCCTTCAGATTTCAAAGTCTGGAAGACGGGTCAGACTCGAGATCAAGCTGTTTTATTGAGCGACATTCTTTCCCCCTTCTTTTCATGA ATGAAAAGGACTGCCGAAGAACAGTCTCGCATATTGCGTGAAATTCCACGAGTGATTGCAGATGAAACAGAATTTAAAGGCATTTATGTTGGTGGAAATCAAGGAGATCGTGTCACTAACGAAGGAGATGAAACAAGATTGCAGATGAGAAATGAGGTTTCAGATGATACAAGTCATGGAGAAACTGTACCTAGTTCAAACCCAAATGTTGTTATTTATGTTGCACAAAACAGAACTGCAGCTTTGATGTCCAACATGAAAGAATTTGCAGAATCTAGACAGAGTGTTCTTGATGAAGAACAGCCCCCACATCCGGTAGAATCTACGTATAATAGCTTTAATGAGACAGAACTTATAAATCAGGTGGAGAAAGGCTGTCAAGCGAATGAGCAGATTAAAGAATCTAGAGTGATAAATTTGAGCGATGATGATGAACCACCTAGGGCTGAAGAGCATGATGGGAATAACAAACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGATGTTCAAGGGCCCTTTTGTCTTGCGTCGTTGAAAAATTGGAAGGATGCTGACTATTTTCCTTCAGATTTCAAAGTCTGGAAGACGGGTCAGACTCGAGATCAAGCTGTTTTATTGAGCGACATTCTTTCCCCCTTCTTTTCATGA ATGAAAAGGACTGCCGAAGAACAGTCTCGCATATTGCGTGAAATTCCACGAGTGATTGCAGATGAAACAGAATTTAAAGGCATTTATGTTGGTGGAAATCAAGGAGATCGTGTCACTAACGAAGGAGATGAAACAAGATTGCAGATGAGAAATGAGGTTTCAGATGATACAAGTCATGGAGAAACTGTACCTAGTTCAAACCCAAATGTTGTTATTTATGTTGCACAAAACAGAACTGCAGCTTTGATGTCCAACATGAAAGAATTTGCAGAATCTAGACAGAGTGTTCTTGATGAAGAACAGCCCCCACATCCGGTAGAATCTACGTATAATAGCTTTAATGAGACAGAACTTATAAATCAGGTGGAGAAAGGCTGTCAAGCGAATGAGCAGATTAAAGAATCTAGAGTGATAAATTTGAGCGATGATGATGAACCACCTAGGGCTGAAGAGCATGATGGGAATAACAAACTAAGAAGCTTGATTTGGTATTATTTAGATCCTCAGGGGGATGTTCAAGGGCCCTTTTGTCTTGCGTCGTTGAAAAATTGGAAGGATGCTGACTATTTTCCTTCAGATTTCAAAGTCTGGAAGACGGGTCAGACTCGAGATCAAGCTGTTTTATTGAGCGACATTCTTTCCCCCTTCTTTTCATGA MKRTAEEQSRILREIPRVIADETEFKGIYVGGNQGDRVTNEGDETRLQMRNEVSDDTSHGETVPSSNPNVVIYVAQNRTAALMSNMKEFAESRQSVLDEEQPPHPVESTYNSFNETELINQVEKGCQANEQIKESRVINLSDDDEPPRAEEHDGNNKLRSLIWYYLDPQGDVQGPFCLASLKNWKDADYFPSDFKVWKTGQTRDQAVLLSDILSPFFS Homology
BLAST of Lcy08g000080 vs. ExPASy Swiss-Prot
Match: Q9FT92 (Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 PE=1 SV=2) HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17 Identity = 75/238 (31.51%), Postives = 104/238 (43.70%), Query Frame = 0
BLAST of Lcy08g000080 vs. ExPASy Swiss-Prot
Match: Q9SIV5 (Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NERD PE=1 SV=3) HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10 Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0
BLAST of Lcy08g000080 vs. ExPASy Swiss-Prot
Match: Q9SD34 (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN=At3g51120 PE=2 SV=3) HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10 Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of Lcy08g000080 vs. ExPASy Swiss-Prot
Match: Q5U236 (GRB10-interacting GYF protein 2 OS=Xenopus laevis OX=8355 GN=gigyf2 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 5.5e-04 Identity = 29/76 (38.16%), Postives = 36/76 (47.37%), Query Frame = 0
BLAST of Lcy08g000080 vs. ExPASy TrEMBL
Match: A0A6J1D1W3 (uncharacterized protein At5g08430 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91 Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0
BLAST of Lcy08g000080 vs. ExPASy TrEMBL
Match: A0A6J1D418 (uncharacterized protein At5g08430 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91 Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0
BLAST of Lcy08g000080 vs. ExPASy TrEMBL
Match: A0A6J1D2W8 (uncharacterized protein At5g08430 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91 Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0
BLAST of Lcy08g000080 vs. ExPASy TrEMBL
Match: A0A6J1D317 (uncharacterized protein At5g08430 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016836 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 1.2e-91 Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0
BLAST of Lcy08g000080 vs. ExPASy TrEMBL
Match: A0A6J1HZR7 (uncharacterized protein At5g08430 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468398 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.4e-90 Identity = 175/215 (81.40%), Postives = 189/215 (87.91%), Query Frame = 0
BLAST of Lcy08g000080 vs. NCBI nr
Match: XP_022148065.1 (uncharacterized protein At5g08430 isoform X4 [Momordica charantia]) HSP 1 Score: 345.9 bits (886), Expect = 2.5e-91 Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0
BLAST of Lcy08g000080 vs. NCBI nr
Match: XP_022148062.1 (uncharacterized protein At5g08430 isoform X1 [Momordica charantia]) HSP 1 Score: 345.9 bits (886), Expect = 2.5e-91 Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0
BLAST of Lcy08g000080 vs. NCBI nr
Match: XP_022148063.1 (uncharacterized protein At5g08430 isoform X2 [Momordica charantia]) HSP 1 Score: 345.9 bits (886), Expect = 2.5e-91 Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0
BLAST of Lcy08g000080 vs. NCBI nr
Match: XP_022148064.1 (uncharacterized protein At5g08430 isoform X3 [Momordica charantia]) HSP 1 Score: 345.9 bits (886), Expect = 2.5e-91 Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0
BLAST of Lcy08g000080 vs. NCBI nr
Match: XP_022969376.1 (uncharacterized protein At5g08430 isoform X2 [Cucurbita maxima]) HSP 1 Score: 342.4 bits (877), Expect = 2.8e-90 Identity = 175/215 (81.40%), Postives = 189/215 (87.91%), Query Frame = 0
BLAST of Lcy08g000080 vs. TAIR 10
Match: AT5G08430.1 (SWIB/MDM2 domain;Plus-3;GYF ) HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18 Identity = 75/238 (31.51%), Postives = 104/238 (43.70%), Query Frame = 0
BLAST of Lcy08g000080 vs. TAIR 10
Match: AT5G23480.1 (SWIB/MDM2 domain;Plus-3;GYF ) HSP 1 Score: 70.1 bits (170), Expect = 2.5e-12 Identity = 63/227 (27.75%), Postives = 104/227 (45.81%), Query Frame = 0
BLAST of Lcy08g000080 vs. TAIR 10
Match: AT2G16485.1 (nucleic acid binding;zinc ion binding;DNA binding ) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-11 Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0
BLAST of Lcy08g000080 vs. TAIR 10
Match: AT3G51120.1 (DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding ) HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11 Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of Lcy08g000080 vs. TAIR 10
Match: AT2G18090.1 (PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein ) HSP 1 Score: 63.2 bits (152), Expect = 3.1e-10 Identity = 20/58 (34.48%), Postives = 38/58 (65.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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