Lcy07g019390 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g019390
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionNon-structural maintenance of chromosomes element 1 homolog
LocationChr07: 47845218 .. 47850002 (+)
RNA-Seq ExpressionLcy07g019390
SyntenyLcy07g019390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATTTTCACGATCCTGCAACCAGCGAACGCGACTTCCAGGCGAAGCAGCGAACACAACGGCGGCGACGGCGAGTACACGGCGGTGGTGACGGCGAGTTCACAACGGCAGCGAACACGACGGCGAGTAGTTCACGATTTTAAGAACCGAACACGATTTCCAATCTTAGTGTATGAATTTTCTGCTCCATGAGTTTCTTCTTTATTATTTCTGGAGCAAGTCATTTCTCAGGGGCATGAGTATTGGTCGAAGATAGAGCTCATTTTTGTTAATCTTCTGTTAATCAGGAGCTTTGAGATAGTGGGTCAAGGTGTATGGGTGCAGATATCCTTTATGTCTCACCTTAAATGTTTCTTTTGACTTAAAATTTGTTTTTAATATAATTGTTCAACTGTTTCTATATCTCTTGCCTTGAACGTAGTGGTTGGTGTTTCTGCTTGGTTATAAGAACCTTGGGTTGTTTACTAAAATAGGACACGAAACTTCACTTCCGGGTAAGTCTCTGAAAGTTCTTCCCGCACAAACTCTTCTCTTATATGTTTTGGCTGAAATTTCTTACAGAACCAACAATGTCTGAATTTTTGAAGTATTAGTTGACCTTGTATTAGGGTTCAGAATGCCGGAGCTGAGCTGGAGACATCACACTCTCATTCAAGCGCTACTCACTCGTGGCCCACTCAGAGAGGATCGGTTCCGTTTGGTGTTTACCCGCATCACCGAAAAGAGTCCAGGTTTGAAATTCTTTCTCGTTTATCAGTTTAGTATCCAAGTTGGGAAGCAATGATTTAAGAGTACGGCGTCCTGCTCCATTTTGTCTAACAAATGATGTAGTATTTGTCCAAGGCTTTTTGTAATTATACGCTAGGTTCTATCATTTTGAGTTGGCAGCCCTTCCTTTAAGGGAGGTCTTTTTGGGGCTGGTTTTTTTTGTATGCCCTTGTATTCTTTCATTTTTCCTCAACGAAAGCTGGTATATTCATCAAAAAAAAAAAAAAAAAAATTGTAGTAAATTTATGTTCAAAGACTGCTTGAAATTTGCAATAGAATGGTGTTTGAATCTAATGTTAATGGAAGAAATTGCATCTGGGTTTACAACCCTGTACGTGTTAGAAATATGTATCCCTTTCGGAGTTTGCTCTGGAGAAAATATATTGTTTTGGTTTCTTAAAGGTTATAATCAACACTCTTGTAGACCACATACACCTTTCTACCAGCACAACCCTTTCTCCATCCATAACGATTGAAAGAGGAGTATTTTAATTGATATTTTATCTGGGAAATAATATACACATATTGGCTGATGGTTGACAACTTATGTATGTTCAATGTTTGCTTTGGTGCAGATAATGACCAGCAGCTTTTTAATAGTTACCTCCTGGCAATAAATAAAGCACTTTCATTTGCTCAGTTTGAGCTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTATTATGGCTTGGTCAATACTGTATCTGACGAACAGTCCAAACTGGGAACGAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTGAGGTTCTTCAACCTTTTCTTTTCTCTTTACTCTTCAGAGTTTGGATACCGATCCGACATCTGTAACATATAAATCTTAAGTTGTCATCGTTGCCATTCTTACTGGATTGGATATGAATGTATGTGGATGGTCTTCTCATCCCCTTCTTAACTATACCAGGACAAATATGATAAAAGGAGGAAAAGTGAGCTCCCTATTTGCCAAAGAGTTGCAAAAAACTCTATATTGACTCTCTGACTTTCAAAAGAAGAAGTTGGGAACGGTTACAAAGCTATTAAAGAGACTACACAATCTGAAAACTGGATAGATTATTCTATCGATAGTCTCATGCAGAGTATAGGAGGCTTTCTCAAAATGTTACCACTCCTTTCTAACCAAATAGCCTAGAAAATTGCACCCACCAAGAGCCTCCAAAATGTAATCATCTTGTCAAAGAGACACATTCCAAACAAGCAGTGGCAAATTGCCCTATGATCATCTTGGGGTTGCACCAACATGCATATATTGTTTGAAATATGTTATGGATGGCTGTCTCATCTCTTATAATGATGTTTTATCTTAATCTCAAGTACTAATTGTCATTGTTATATGTGCATACTCGGTTATAAGTTATAAAACATTCCTACTCAACTGACAAACTCATTTATCAGTTTAGGGATTTGCCCACTCTATCTGAGAATTCTGAGTGCAATGAGGGCTAGCTGCTTTAGAAATTTGATTGTTAACCACGTAACGTTTGGTGGCTTTAACTGCTAAGGTTTATGCTGCCTTATTTATTGAATAATCAACAATGGGAAATATTGCTGTTCTCCAATAAACTGGCCCTTCTGTTAATTTGCCTAACAATCAATGATGGGAACTAAGTGGTTATAATATATGCATCTTCTGTTTTGTTGTCGTTGAGGTATTTAATTTATTAAGAAAAAATTGCAATGTCAGGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGGTTTCTCTCGTTTTTCTTTGACCAAACTACCATTTTGTCTAGCCCATTATGATGAAGTGTGATGCCAACATACTTTTGAGTTCGCTATTGTCAAGTCAGCTGCATATTTAACTAAAGTTAGCATCTCTGATCTTTTGCCTGATAAACAAGACTAATTGCAGTCACCATGTTATAGAGCGTATTTGGACAAGAACATTCTTCAAGTTGTCACATCTCTTGAAAGAAAATAACTATTGGGAATGTGTTCCACAGGAGTATCAATTGATTTTTTATTATATCATCTATAGAAGGTTTACTAGTTCTTGAATTATGGATTGATGCGAGCGAGATTCTTCTTAAATTTAAATATTGAGAATGGAGTGGCAAGCGTTCTCTACATGGTAAAAGCCCGTATCTTATTAATCAATTTTTGATATTGGGAACTGTTAATCTGACAGTGGTATGAATGACTAGTATTTATTTATACATTCACTTCTTTGCAGCCACTTAAATTAGTTTTGCTCAAGAGTCACCCTCAAGTTTGTTTTTTTTTATTTATTTCTTTTCCAGTACCTGAACTTTTATAATTGTTAAATTTGAAACTAAGAGTTTAAGGCCACTCTTAAATTCTACACAATTTGGTTGCAAGGCTTTTGATTTGCCACCATTGAGAGTAGAGTTGAGAACTGACAAAAGTTTCCAGCTCCTTGTATTTGTAACAATGTATGCCTTTATCTGATTCTTCATATATTTAAGTTTCCTATTGTATCATATTCGTATGCATTGTTTGACTATTACTGTTTTATCACTGCCAGCTGGGGGATACAGGGTCCCAGTCTCAAGTCATACCACCTGCCTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTGTGTAAATTTGGGAGTCAGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGAAGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGTTCTCTTCTTTTATGTCATTTTATGATTTACACTGGTCGAGAAAGCTCCTGAAAAGTCTATTATCATCTTATCTCAATTTTGTATGCTGCATTATATTTCCCAATTCCCACACTAATAGGAGAACCAAAACGTTTGATGAGAGGGATTTTTTGTTGGTAACACAATTTGTTTGGATCTCAACATGATTTGAGCTCCACATGGGTTTGTACTGTAGAGAACTTTAAGAGAACTTATTTCCTTGATGATTTATATCTTTGCTGGACTTGTTATTCACAGGCAGAGTTGTGTGATAATGAAGGTTGCACTGTCCGTGTACATCGATATTGCCTTAAGAAAATGTTATCCAATAAAAAGGTAATAAGATGTGGTACCCTCCTATCTTAAATCTTTAATCAGCAAGATCTCTTGTGCCTAACAGTTCTTTAACTGACTATTATTAGAGTAAAAGGGCTTGCCCAGGTTGTGGCACTCAATGGCGAGCTACAGCGCCGAATATGGAGTCCAGGGAGGAAGAGGAGGAGCCAGATACGCGCACTCAAGACCCGTCATCATCACATAAGAGGAAGAAATCCAGATTGAACATAAATATTGATTCAGGACCGAATGGAGATAGTACGGCACAAACTTCCCAACCTCCTCCAGATACAAGGAGAGTAACACGAAGTTCTGCACGCCAGCGGTAGGTGCTTGGAATGAATATAGTTTCATGGATCCTAGTCTAGGAGTTGTAAAGTGTGCAACAACTGCACTTTTTGGTGTCCTGTGTCAAAATTGTCACCCTATTTAAAATCCGTTGAATGGATTGTTTTGAAGTAGTTGTACACAACTTGAATGTAGAGTGCATTACACAATGTAAGCAAAAAGTAAAAGTTCCTCTTGCAGACTATAGCAGTGGTTCTACGTTCTTGTCGTCCATACATGCAAGGAACGAGCTGTGCCATTGTAAAGATTGACTTTTTCTTTTTGTACCTAGAACAGTTTGATTGTTTTTAGTAGATTTATTATTGTAACTTCAGAGAATAGAGTAAATAGGTTCAGTATCCTAAAAATAACCCAAACTGTAGCCTATTTGTTACTTTTCAATGATGTTATGATGATAGTGAACAAAGTATCATGGCGTCTTTGATTGTGTAAACAGATATGCAGTTCAATGTCGTAAATGTTGTAAATTTTTCATACTACAGCAATACTAGAATTTTTC

mRNA sequence

AAAATTTTCACGATCCTGCAACCAGCGAACGCGACTTCCAGGCGAAGCAGCGAACACAACGGCGGCGACGGCGAGTACACGGCGGTGGTGACGGCGAGTTCACAACGGCAGCGAACACGACGGCGAGTAGTTCACGATTTTAAGAACCGAACACGATTTCCAATCTTAGTGAGCTTTGAGATAGTGGGTCAAGGTGTATGGGTGCAGATATCCTTTATGTCTCACCTTAAATGTTTCTTTTGACTTAAAATTTGTTTTTAATATAATTGTTCAACTGTTTCTATATCTCTTGCCTTGAACGTAGTGGTTGGTGTTTCTGCTTGGTTATAAGAACCTTGGGTTGTTTACTAAAATAGGACACGAAACTTCACTTCCGGGTAAGTCTCTGAAAGTTCTTCCCGCACAAACTCTTCTCTTATATGTTTTGGCTGAAATTTCTTACAGAACCAACAATGTCTGAATTTTTGAAGTATTAGTTGACCTTGTATTAGGGTTCAGAATGCCGGAGCTGAGCTGGAGACATCACACTCTCATTCAAGCGCTACTCACTCGTGGCCCACTCAGAGAGGATCGGTTCCGTTTGGTGTTTACCCGCATCACCGAAAAGAGTCCAGATAATGACCAGCAGCTTTTTAATAGTTACCTCCTGGCAATAAATAAAGCACTTTCATTTGCTCAGTTTGAGCTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTATTATGGCTTGGTCAATACTGTATCTGACGAACAGTCCAAACTGGGAACGAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATACAGGGTCCCAGTCTCAAGTCATACCACCTGCCTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTGTGTAAATTTGGGAGTCAGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGAAGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTGATAATGAAGGTTGCACTGTCCGTGTACATCGATATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAGGTTGTGGCACTCAATGGCGAGCTACAGCGCCGAATATGGAGTCCAGGGAGGAAGAGGAGGAGCCAGATACGCGCACTCAAGACCCGTCATCATCACATAAGAGGAAGAAATCCAGATTGAACATAAATATTGATTCAGGACCGAATGGAGATAGTACGGCACAAACTTCCCAACCTCCTCCAGATACAAGGAGAGTAACACGAAGTTCTGCACGCCAGCGGTAGGTGCTTGGAATGAATATAGTTTCATGGATCCTAGTCTAGGAGTTGTAAAGTGTGCAACAACTGCACTTTTTGGTGTCCTGTGTCAAAATTGTCACCCTATTTAAAATCCGTTGAATGGATTGTTTTGAAGTAGTTGTACACAACTTGAATGTAGAGTGCATTACACAATGTAAGCAAAAAGTAAAAGTTCCTCTTGCAGACTATAGCAGTGGTTCTACGTTCTTGTCGTCCATACATGCAAGGAACGAGCTGTGCCATTGTAAAGATTGACTTTTTCTTTTTGTACCTAGAACAGTTTGATTGTTTTTAGTAGATTTATTATTGTAACTTCAGAGAATAGAGTAAATAGGTTCAGTATCCTAAAAATAACCCAAACTGTAGCCTATTTGTTACTTTTCAATGATGTTATGATGATAGTGAACAAAGTATCATGGCGTCTTTGATTGTGTAAACAGATATGCAGTTCAATGTCGTAAATGTTGTAAATTTTTCATACTACAGCAATACTAGAATTTTTC

Coding sequence (CDS)

ATGCCGGAGCTGAGCTGGAGACATCACACTCTCATTCAAGCGCTACTCACTCGTGGCCCACTCAGAGAGGATCGGTTCCGTTTGGTGTTTACCCGCATCACCGAAAAGAGTCCAGATAATGACCAGCAGCTTTTTAATAGTTACCTCCTGGCAATAAATAAAGCACTTTCATTTGCTCAGTTTGAGCTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTATTATGGCTTGGTCAATACTGTATCTGACGAACAGTCCAAACTGGGAACGAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATACAGGGTCCCAGTCTCAAGTCATACCACCTGCCTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTGTGTAAATTTGGGAGTCAGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGAAGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTGATAATGAAGGTTGCACTGTCCGTGTACATCGATATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAGGTTGTGGCACTCAATGGCGAGCTACAGCGCCGAATATGGAGTCCAGGGAGGAAGAGGAGGAGCCAGATACGCGCACTCAAGACCCGTCATCATCACATAAGAGGAAGAAATCCAGATTGAACATAAATATTGATTCAGGACCGAATGGAGATAGTACGGCACAAACTTCCCAACCTCCTCCAGATACAAGGAGAGTAACACGAAGTTCTGCACGCCAGCGGTAG

Protein sequence

MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVRSFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGCGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDSTAQTSQPPPDTRRVTRSSARQR
Homology
[Close]
BLAST of Lcy07g019390 vs. ExPASy Swiss-Prot
Match: Q6PAF4 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX=8355 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-10
Identity = 59/277 (21.30%), Postives = 116/277 (41.88%), Query Frame = 0 

Query: 8   HHTLIQALLTRGPLREDRFRLVFTRITE-KSPDNDQQLFNSYLLAINKALSFAQFELRGC 67
           H   +QAL++ G +     R +     E           + ++  +N+ L      +   
Sbjct: 9   HQRFLQALMSHGIMEGSAVRALHRHCCELHKVHYMHDKLDDFVGVLNRHLQPLFMTIEKG 68

Query: 68  RNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHL 127
             + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G  ++I+ L+L
Sbjct: 69  VGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELIIL--SDNGFATSISILNL 128

Query: 128 QLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGCVNLGVRSF 187
             E Q                  S  +K+K + +L     Q++WL    +G   L  R  
Sbjct: 129 ADELQ------------------SKKMKKKEVEQLLQSFVQEKWL-IGRNGEYTLHTRCI 188

Query: 188 LDLRSWFRT---NEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPG 247
           ++L  + R    +    C VC +  ++++LC+N  C + +H  C  K   + K+   CP 
Sbjct: 189 MELEHYIRNTYQDVAKICNVCRKVAIQSQLCEN--CGIPLHLQCAGKYF-HGKANPTCPN 248

Query: 248 CGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKS 277
           C   W    P++     +    ++T+     ++R K+
Sbjct: 249 CNESWPHEIPDLNQVSSQGPSHSQTETVRGRNQRSKN 261

[Close]
BLAST of Lcy07g019390 vs. ExPASy Swiss-Prot
Match: Q6P881 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicalis OX=8364 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.8e-08
Identity = 55/257 (21.40%), Postives = 105/257 (40.86%), Query Frame = 0 

Query: 3   ELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDN-DQQLFNSYLLAINKALSFAQF 62
           +++  H   +Q L++ G +     R +     E    N      + ++  +NK L     
Sbjct: 4   QINESHQRFLQVLMSHGIMESSLVRALHRHCCEVHKVNYMHDNLDDFVGVLNKHLQPLFM 63

Query: 63  ELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNI 122
           ++     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G    I
Sbjct: 64  KIEKGVGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELII--ISENGFAPPI 123

Query: 123 AALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGCVNL 182
           + L+L  E Q                  S  +K+K + +L     QD+WL    +G   L
Sbjct: 124 SILNLADELQ------------------SKKMKKKEVEQLLQSFVQDKWL-IGRNGEYTL 183

Query: 183 GVRSFLDLRSWFRT---NEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSK 242
             R  ++L  +      +    C VC++  ++ +LC+N  C + +H  C   +     + 
Sbjct: 184 HTRCIMELEHYILNTYQDVAKICNVCHKIAIQCQLCEN--CGIPLHLQC-AGIYFRGIAN 236

Query: 243 RACPGCGTQWRATAPNM 252
             CP C   W    P++
Sbjct: 244 PLCPNCKESWPHEIPDL 236

[Close]
BLAST of Lcy07g019390 vs. ExPASy TrEMBL
Match: A0A6J1JYV1 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.4e-157
Identity = 279/314 (88.85%), Postives = 292/314 (92.99%), Query Frame = 0 

Query: 1   MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQ 60
           M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVR 180
           IAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGC 240
           SFLDLRSWFRTN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS--TAQTSQPP 300
           GTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS   AQ SQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRVTRSSARQR 313
           PDTRR+TRSSA QR
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]
BLAST of Lcy07g019390 vs. ExPASy TrEMBL
Match: A0A6J1K5P2 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.4e-157
Identity = 279/314 (88.85%), Postives = 292/314 (92.99%), Query Frame = 0 

Query: 1   MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQ 60
           M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVR 180
           IAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGC 240
           SFLDLRSWFRTN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS--TAQTSQPP 300
           GTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS   AQ SQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRVTRSSARQR 313
           PDTRR+TRSSA QR
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]
BLAST of Lcy07g019390 vs. ExPASy TrEMBL
Match: A0A6J1GZN9 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111459112 PE=3 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.0e-155
Identity = 276/314 (87.90%), Postives = 291/314 (92.68%), Query Frame = 0 

Query: 1   MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQ 60
           M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSP+ND+QLFN+YLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120

Query: 121 IAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVR 180
           IAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGC 240
           SFLDLRSWFRTN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS--TAQTSQPP 300
           GTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS   AQ SQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300

Query: 301 PDTRRVTRSSARQR 313
           PDTRR+TRSSA  R
Sbjct: 301 PDTRRITRSSAHPR 314

[Close]
BLAST of Lcy07g019390 vs. ExPASy TrEMBL
Match: A0A6J1DI86 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.3e-154
Identity = 278/313 (88.82%), Postives = 292/313 (93.29%), Query Frame = 0 

Query: 1   MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQ 60
           M ELSWRHHTLIQALL RGPLRED+F L+FTRIT KSPDNDQQLFN+YLLAINKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDTGSQ-SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGV 180
           IAALHLQLENQLGD GSQ SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPG 240
           RSFLDLRSWFRTN++PSCEVCNEAGVKAELCDNEGCTVRVH+YCLKKMLSNKKSKRACPG
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDSTAQTSQPPP 300
           CGT+WR+T  NMES+EEE+EPD RTQ  SSS +RKKSRLNI++DS  NG   A  SQPPP
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG---ASASQPPP 300

Query: 301 DTRRVTRSSARQR 313
           +TRRVTRSSARQR
Sbjct: 301 ETRRVTRSSARQR 310

[Close]
BLAST of Lcy07g019390 vs. ExPASy TrEMBL
Match: A0A6J1DJY3 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.3e-154
Identity = 278/313 (88.82%), Postives = 292/313 (93.29%), Query Frame = 0 

Query: 1   MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQ 60
           M ELSWRHHTLIQALL RGPLRED+F L+FTRIT KSPDNDQQLFN+YLLAINKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDTGSQ-SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGV 180
           IAALHLQLENQLGD GSQ SQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPG 240
           RSFLDLRSWFRTN++PSCEVCNEAGVKAELCDNEGCTVRVH+YCLKKMLSNKKSKRACPG
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDSTAQTSQPPP 300
           CGT+WR+T  NMES+EEE+EPD RTQ  SSS +RKKSRLNI++DS  NG   A  SQPPP
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG---ASASQPPP 300

Query: 301 DTRRVTRSSARQR 313
           +TRRVTRSSARQR
Sbjct: 301 ETRRVTRSSARQR 310

[Close]
BLAST of Lcy07g019390 vs. NCBI nr
Match: XP_022995422.1 (non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 564.7 bits (1454), Expect = 5.0e-157
Identity = 279/314 (88.85%), Postives = 292/314 (92.99%), Query Frame = 0 

Query: 1   MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQ 60
           M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVR 180
           IAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGC 240
           SFLDLRSWFRTN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS--TAQTSQPP 300
           GTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS   AQ SQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRVTRSSARQR 313
           PDTRR+TRSSA QR
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]
BLAST of Lcy07g019390 vs. NCBI nr
Match: XP_022995424.1 (non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 564.7 bits (1454), Expect = 5.0e-157
Identity = 279/314 (88.85%), Postives = 292/314 (92.99%), Query Frame = 0 

Query: 1   MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQ 60
           M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVR 180
           IAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGC 240
           SFLDLRSWFRTN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS--TAQTSQPP 300
           GTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS   AQ SQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRVTRSSARQR 313
           PDTRR+TRSSA QR
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]
BLAST of Lcy07g019390 vs. NCBI nr
Match: XP_023533198.1 (non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-156
Identity = 278/314 (88.54%), Postives = 292/314 (92.99%), Query Frame = 0 

Query: 1   MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQ 60
           M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVR 180
           IAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGC 240
           SFLDLRSWFRTN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS--TAQTSQPP 300
           GTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS   AQ SQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRVTRSSARQR 313
           PDTRR+TRS+A QR
Sbjct: 301 PDTRRITRSTAHQR 314

[Close]
BLAST of Lcy07g019390 vs. NCBI nr
Match: KAG7035803.1 (Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 559.7 bits (1441), Expect = 1.6e-155
Identity = 277/314 (88.22%), Postives = 290/314 (92.36%), Query Frame = 0 

Query: 1   MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQ 60
           M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSPDND+QLFN+YLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVR 180
           IAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGC 240
           SFLDLRSWFRTN++PSCEVCNEAGVKAELC NEGCTVRVH YCLKKMLSNKKSKRACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS--TAQTSQPP 300
           GTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS   AQ SQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300

Query: 301 PDTRRVTRSSARQR 313
           PDTRR+TRSSA  R
Sbjct: 301 PDTRRITRSSAHPR 314

[Close]
BLAST of Lcy07g019390 vs. NCBI nr
Match: XP_022957637.1 (non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata])

HSP 1 Score: 559.3 bits (1440), Expect = 2.1e-155
Identity = 276/314 (87.90%), Postives = 291/314 (92.68%), Query Frame = 0 

Query: 1   MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQ 60
           M ELSWRHHTLIQALL RGPLRED F L+FTRITEKSP+ND+QLFN+YLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVN VSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120

Query: 121 IAALHLQLENQLGDTGSQSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGVR 180
           IAALHLQLENQLGD GSQS VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDG VNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPGC 240
           SFLDLRSWFRTN++PSCEVCNEAGVKAELC NEGCTVRVHRYCLKKMLSNKKSKRACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDS--TAQTSQPP 300
           GTQWR+TAPN+E +EEE+EPD R Q  SSSHKRKK+RLN +IDSGPNGDS   AQ SQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300

Query: 301 PDTRRVTRSSARQR 313
           PDTRR+TRSSA  R
Sbjct: 301 PDTRRITRSSAHPR 314

[Close]
BLAST of Lcy07g019390 vs. TAIR 10
Match: AT5G21140.1 (embryo defective 1379 )

HSP 1 Score: 334.3 bits (856), Expect = 1.0e-91
Identity = 174/319 (54.55%), Postives = 225/319 (70.53%), Query Frame = 0 

Query: 1   MPELSWRHHTLIQALLTRGPLREDRFRLVFTRITEKSPDNDQQLFNSYLLAINKALSFAQ 60
           M  LSW+HHTLIQAL++RGPL+E  F  +FT +T ++P   +++F+ YLL INK LS+  
Sbjct: 1   MASLSWKHHTLIQALISRGPLKEKEFHSIFTAVTGRNPVTVKKIFDKYLLEINKELSYVH 60

Query: 61  FELRGCRNQYDGRVYYGLVNTVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FEL+ CR+QYDG+V YG+VN V+D+QSKLGTKYSVPQIAF+K I+EAIAQD +AQG IS+
Sbjct: 61  FELKACRDQYDGQVCYGVVNNVADDQSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISS 120

Query: 121 IAALHLQLENQLGDTGSQS-QVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGCVNLGV 180
             AL+++LENQ+    S S Q +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+
Sbjct: 121 FDALNIRLENQISSEASSSQQQVPPAFKNFSMTQKEKTLDELVRDKWLCRTRERNIGLGI 180

Query: 181 RSFLDLRSWFRTNEVPSCEVCNEAGVKAELCDNEGCTVRVHRYCLKKMLSNKKSKRACPG 240
           RS LDLRSWFR N+VPSCEVCNEAGVKA+LC  EGC VR+H+YCLKK+LS +  KR C G
Sbjct: 181 RSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPTEGCPVRIHKYCLKKLLSQRDDKR-CSG 240

Query: 241 CGTQW-----RATAPNMESREEEEEPDTRTQDPSSSHKRKKSRLNINIDSGPNGDSTAQ- 300
           CG  W       T    E+  +EEE +T+   P +  +R++       DS  NG S A  
Sbjct: 241 CGKPWPLSKITKTEAAEEAMNDEEESETQATAPKAKRRRQQR------DSTENGSSQASL 300

Query: 301 TSQPPPDTRRVTRSSARQR 313
            S    +TRRVTRS    R
Sbjct: 301 ASTSGANTRRVTRSVGHSR 312

The following BLAST results are available for this feature:
BLAST of Lcy07g019390 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6PAF42.5e-1021.30Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX... [more]
Q6P8811.8e-0821.40Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicali... [more]
BLAST of Lcy07g019390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JYV12.4e-15788.85Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ... [more]
A0A6J1K5P22.4e-15788.85Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ... [more]
A0A6J1GZN91.0e-15587.90Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita moschat... [more]
A0A6J1DI864.3e-15488.82Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant... [more]
A0A6J1DJY34.3e-15488.82Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant... [more]
BLAST of Lcy07g019390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022995422.15.0e-15788.85non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbit... [more]
XP_022995424.15.0e-15788.85non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbit... [more]
XP_023533198.11.1e-15688.54non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subs... [more]
KAG7035803.11.6e-15588.22Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argy... [more]
XP_022957637.12.1e-15587.90non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata][more]
BLAST of Lcy07g019390 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G21140.11.0e-9154.55embryo defective 1379 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014857Zinc finger, RING-likePFAMPF08746zf-RING-likecoord: 197..240
e-value: 1.2E-8
score: 35.2
IPR014857Zinc finger, RING-likeCDDcd16493RING-CH-C4HC3_NSE1coord: 196..242
e-value: 2.23262E-13
score: 61.6769
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 84..193
e-value: 1.2E-16
score: 62.6
NoneNo IPR availableGENE3D3.90.1150.220coord: 5..82
e-value: 1.5E-14
score: 55.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..279
NoneNo IPR availablePANTHERPTHR20973:SF1BNAANNG27900D PROTEINcoord: 1..310
IPR011513Non-structural maintenance of chromosomes element 1PFAMPF07574SMC_Nse1coord: 8..185
e-value: 1.5E-42
score: 145.7
IPR011513Non-structural maintenance of chromosomes element 1PANTHERPTHR20973NON-SMC ELEMENT 1-RELATEDcoord: 1..310
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 195..255
e-value: 2.9E-11
score: 44.7

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g019390.1Lcy07g019390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0006301 postreplication repair
biological_process GO:0006281 DNA repair
cellular_component GO:0005634 nucleus
cellular_component GO:0030915 Smc5-Smc6 complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004842 ubiquitin-protein transferase activity