Lcy07g018430 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g018430
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	cyclin-dependent protein kinase inhibitor SMR13
Location	Chr07: 47006819 .. 47007656 (-)
RNA-Seq Expression	Lcy07g018430
Synteny	Lcy07g018430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGCCTCGGGCAGCGGGCAGCCTGCCCTGATTATCTCTGCTTATAATCAGCTCGAGATGGGCACGAACACACACTTGTGAATGTGAACCCTCTTTGTCTCTCCTCTTTCTCTCTCTAGGGTTTTGTGGGTTTTTGAACTTCAATCCTTCTCTTTAATGGGTATCTTCCCAAATTCTCTGAAACCCTTCTCCTTTTAGACGAAATCCCTTCTAAAGCTCCAGTCTTTGCACAAACCCATCAACAAAACCCTGTTCCTTTACCAAAAAAAAGGTTCAATTTGTTTCCAAACGTTGTTGTTGGCTGTTGGCTGTTGGCTGTTCTTGTTTTTGTTTTGTTCCATTTGGCTTTTGCCTCTTTTTTTTTCCCCCTTTTTTGAGTCAAATTCCTTTTAGCAAATTCAAAAACCCCCCTTCAAAATGGCGCCTTCAGGAGGAAAAATCGCGACAAGAACCAGAAGAAATTTACCCAACTTGAAGCTGAATAAGAAAATGAAGAAGACGAAGAAACAGCCGCAACAACAACAACAACAGCAACAGAAGCAGATTCCGGCGACACAGAACGACCCCGCCTTTCAATTTTCCGACGACGACGACGACGACGGCGGCTGCAGCACTCCAAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACGTGTCCACCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGATTGCTCATTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCGTCGCTCTGCCGAACATTTCAGTCTGAAGCTCAAAGCTAATCAAGGCTCGTGTGTTTATACAAATTTTACAGACACATCAA

mRNA sequence

ATTTGCCTCGGGCAGCGGGCAGCCTGCCCTGATTATCTCTGCTTATAATCAGCTCGAGATGGGCACGAACACACACTTGTGAATGTGAACCCTCTTTGTCTCTCCTCTTTCTCTCTCTAGGGTTTTGTGGGTTTTTGAACTTCAATCCTTCTCTTTAATGGGTATCTTCCCAAATTCTCTGAAACCCTTCTCCTTTTAGACGAAATCCCTTCTAAAGCTCCAGTCTTTGCACAAACCCATCAACAAAACCCTGTTCCTTTACCAAAAAAAAGGTTCAATTTGTTTCCAAACGTTGTTGTTGGCTGTTGGCTGTTGGCTGTTCTTGTTTTTGTTTTGTTCCATTTGGCTTTTGCCTCTTTTTTTTTCCCCCTTTTTTGAGTCAAATTCCTTTTAGCAAATTCAAAAACCCCCCTTCAAAATGGCGCCTTCAGGAGGAAAAATCGCGACAAGAACCAGAAGAAATTTACCCAACTTGAAGCTGAATAAGAAAATGAAGAAGACGAAGAAACAGCCGCAACAACAACAACAACAGCAACAGAAGCAGATTCCGGCGACACAGAACGACCCCGCCTTTCAATTTTCCGACGACGACGACGACGACGGCGGCTGCAGCACTCCAAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACGTGTCCACCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGATTGCTCATTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCGTCGCTCTGCCGAACATTTCAGTCTGAAGCTCAAAGCTAATCAAGGCTCGTGTGTTTATACAAATTTTACAGACACATCAA

Coding sequence (CDS)

ATGGCGCCTTCAGGAGGAAAAATCGCGACAAGAACCAGAAGAAATTTACCCAACTTGAAGCTGAATAAGAAAATGAAGAAGACGAAGAAACAGCCGCAACAACAACAACAACAGCAACAGAAGCAGATTCCGGCGACACAGAACGACCCCGCCTTTCAATTTTCCGACGACGACGACGACGACGGCGGCTGCAGCACTCCAAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACGTGTCCACCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGATTGCTCATTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCGTCGCTCTGCCGAACATTTCAGTCTGA

Protein sequence

MAPSGGKIATRTRRNLPNLKLNKKMKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVALPNISV

Homology

[Close]

BLAST of Lcy07g018430 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-15
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 62  GGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF 113
           GGC TPKA++ RIPE+LTCPPAPKKQR   +C  RR  I FFAPPE+ELFF
Sbjct: 52  GGCCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of Lcy07g018430 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-13
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 61  DGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVAL 117
           + GC TP  E+ RIPE+LTCPPAPKKQ+   +C+ RR  IAFFAPP++ELFF  AL
Sbjct: 57  ESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]

BLAST of Lcy07g018430 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-05
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 55  SDDDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF 113
           S+ +D+D   +TP A+  RIP ++ CPPAPKK++     S+   P  FF+PP+LE  F
Sbjct: 46  SNTEDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY--GPREFFSPPDLETVF 101

[Close]

BLAST of Lcy07g018430 vs. ExPASy Swiss-Prot
Match: Q9LNX4 (Cyclin-dependent protein kinase inhibitor SMR5 OS=Arabidopsis thaliana OX=3702 GN=SMR5 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.8e-04
Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 57  DDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSP--IAFFAPPELELFFFV 115
           DDD   GC+TP  +  RIP    CPP  +++R++     +R P    +F PP+L+LFF V
Sbjct: 15  DDDYQMGCTTPTRDDCRIPAYPPCPPPVRRKRSLLGFGKKREPPKKGYFQPPDLDLFFSV 74

[Close]

BLAST of Lcy07g018430 vs. ExPASy Swiss-Prot
Match: Q9SAD3 (Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 GN=SMR8 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 6.8e-04
Identity = 22/63 (34.92%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 50  PAFQFSDDDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELE 109
           P    ++ ++ D   +TP A   RIP +  CP APKK++    CS+      +F+PP+LE
Sbjct: 42  PGVTVTETEEQDQCPTTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLE 101

Query: 110 LFF 113
             F
Sbjct: 102 TVF 104

[Close]

BLAST of Lcy07g018430 vs. ExPASy TrEMBL
Match: A0A6J1JET4 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=LOC111484378 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.4e-38
Identity = 96/123 (78.05%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MAPSGGKIATRTRRNLPNLKLNKKMKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDD-DD 60
           MAPSGGK+ATRTR NLPNLKLNKK+KKTKKQ QQQQQQ+ KQIPA   + A  F+DD  D
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQ-QQQQQQKLKQIPAVIPNDAVHFTDDCSD 60

Query: 61  DDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF-FVALPN 120
            DGGCSTPKAERFRIPEILTCPPAPKK R  SDCS RRSPIAFFAPPELELFF  + +P+
Sbjct: 61  IDGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPD 120

Query: 121 ISV 122
           ISV
Sbjct: 121 ISV 122

[Close]

BLAST of Lcy07g018430 vs. ExPASy TrEMBL
Match: A0A6J1FTJ6 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN=LOC111448665 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 9.7e-38
Identity = 95/123 (77.24%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MAPSGGKIATRTRRNLPNLKLNKKMKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDD 60
           MAPSGGK+ATRTR NLPNLKLNKK+KKTKKQ QQQQQQ+ KQIPA   + A  F+DD  D
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQ-QQQQQQKLKQIPAAIPNDAVHFTDDSTD 60

Query: 61  -DGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF-FVALPN 120
            DGGCSTPKAERFRIP+ILTCPPAPKK R  SDCS RRSPIAFFAPPELELFF  + +P+
Sbjct: 61  IDGGCSTPKAERFRIPDILTCPPAPKKPRPSSDCSLRRSPIAFFAPPELELFFCALPVPD 120

Query: 121 ISV 122
           ISV
Sbjct: 121 ISV 122

[Close]

BLAST of Lcy07g018430 vs. ExPASy TrEMBL
Match: A0A6J1D3Z6 (cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3673 GN=LOC111017372 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.8e-34
Identity = 90/121 (74.38%), Postives = 99/121 (81.82%), Query Frame = 0


Query: 1   MAPSGGKIATRTRRNLPNLKLNKKMKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDD 60
           MAPSGG++A RTR N  +LKL KKMKKTKK     QQQQ+   PAT+ND   Q S +DD 
Sbjct: 1   MAPSGGRMAARTRGNSQSLKL-KKMKKTKK-----QQQQKLPAPATEND-VVQCS-NDDI 60

Query: 61  DGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVALPNIS 120
           DGGCSTP+AERFRIPEI+TCPPAPKKQR VSDCSFRRSPIAFFAPPELELFFF ALP+I 
Sbjct: 61  DGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDIP 113

Query: 121 V 122
           V
Sbjct: 121 V 113

[Close]

BLAST of Lcy07g018430 vs. ExPASy TrEMBL
Match: A0A6J1K7R4 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Cucurbita maxima OX=3661 GN=LOC111491400 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.7e-32
Identity = 85/118 (72.03%), Postives = 93/118 (78.81%), Query Frame = 0


Query: 8   IATRTRRNLPNLKLNKKMKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDDD----GG 67
           +ATR RRN+PN KLNKKMKKT     ++ QQ Q QIP  QND   QF DDD D+    GG
Sbjct: 1   MATRPRRNIPNSKLNKKMKKT---TTKKPQQPQNQIPPPQND-VVQFPDDDFDNDDVGGG 60

Query: 68  CSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVALPNISV 122
            STPKAERFRIPEILTCPP PKKQR VSDCSFRRSPIAFFAPPELELFFF++ P+ISV
Sbjct: 61  YSTPKAERFRIPEILTCPPGPKKQRPVSDCSFRRSPIAFFAPPELELFFFISRPDISV 114

[Close]

BLAST of Lcy07g018430 vs. ExPASy TrEMBL
Match: A0A6J1H2X7 (cyclin-dependent protein kinase inhibitor SMR13-like OS=Cucurbita moschata OX=3662 GN=LOC111459621 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.6e-32
Identity = 84/121 (69.42%), Postives = 93/121 (76.86%), Query Frame = 0


Query: 1   MAPSGGKIATRTRRNLPNLKLNKKMKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDD 60
           MAPSG K+ATR RRN+   K+NKK+KKT        ++ Q QIP  QND   QF  DDD 
Sbjct: 1   MAPSGAKMATRPRRNIRTSKVNKKIKKT------TTKKPQNQIPPPQND-VVQF-PDDDG 60

Query: 61  DGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVALPNIS 120
            GG STPKAERFRIPEILTCPP PKKQR +SDCSFRRSPIAFFAPPELELFFF+A P+IS
Sbjct: 61  GGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIARPDIS 113

Query: 121 V 122
           V
Sbjct: 121 V 113

[Close]

BLAST of Lcy07g018430 vs. NCBI nr
Match: KAG6570398.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167.9 bits (424), Expect = 5.3e-38
Identity = 97/125 (77.60%), Postives = 104/125 (83.20%), Query Frame = 0


Query: 1   MAPSGGKIATRTRRNLPNLKLNKKMKKTKKQPQQQQQQQQ--KQIPATQNDPAFQFSDDD 60
           MAPSGGK+ATRTR NLPNLKLNKK+KKTKKQ QQQQQQQQ  KQIPA   + A  F+DD 
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQQQQKLKQIPAAIPNDAVHFTDDS 60

Query: 61  DD-DGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF-FVAL 120
            D D GCSTPKAERFRIPEILTCPPAPKK R  SDCS RRSPIAFFAPPELELFF  + +
Sbjct: 61  TDIDCGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPV 120

Query: 121 PNISV 122
           P+ISV
Sbjct: 121 PDISV 125

[Close]

BLAST of Lcy07g018430 vs. NCBI nr
Match: XP_022986710.1 (cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima])

HSP 1 Score: 167.2 bits (422), Expect = 9.0e-38
Identity = 96/123 (78.05%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MAPSGGKIATRTRRNLPNLKLNKKMKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDD-DD 60
           MAPSGGK+ATRTR NLPNLKLNKK+KKTKKQ QQQQQQ+ KQIPA   + A  F+DD  D
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQ-QQQQQQKLKQIPAVIPNDAVHFTDDCSD 60

Query: 61  DDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF-FVALPN 120
            DGGCSTPKAERFRIPEILTCPPAPKK R  SDCS RRSPIAFFAPPELELFF  + +P+
Sbjct: 61  IDGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPD 120

Query: 121 ISV 122
           ISV
Sbjct: 121 ISV 122

[Close]

BLAST of Lcy07g018430 vs. NCBI nr
Match: XP_022944116.1 (cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita moschata])

HSP 1 Score: 166.0 bits (419), Expect = 2.0e-37
Identity = 95/123 (77.24%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MAPSGGKIATRTRRNLPNLKLNKKMKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDD 60
           MAPSGGK+ATRTR NLPNLKLNKK+KKTKKQ QQQQQQ+ KQIPA   + A  F+DD  D
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQ-QQQQQQKLKQIPAAIPNDAVHFTDDSTD 60

Query: 61  -DGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF-FVALPN 120
            DGGCSTPKAERFRIP+ILTCPPAPKK R  SDCS RRSPIAFFAPPELELFF  + +P+
Sbjct: 61  IDGGCSTPKAERFRIPDILTCPPAPKKPRPSSDCSLRRSPIAFFAPPELELFFCALPVPD 120

Query: 121 ISV 122
           ISV
Sbjct: 121 ISV 122

[Close]

BLAST of Lcy07g018430 vs. NCBI nr
Match: XP_023522908.1 (cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.5 bits (415), Expect = 5.8e-37
Identity = 94/123 (76.42%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 1   MAPSGGKIATRTRRNLPNLKLNKKMKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDD 60
           MAPSGGK+ATRTR NLPNLKLNKK+KKTKK   QQQQQ+ KQIPA   + A  F+DD  D
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKK---QQQQQKLKQIPAVILNDAVHFTDDSTD 60

Query: 61  -DGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF-FVALPN 120
            DGGCSTPKAERFRIPEILTCPPAPKK R  SDCS RRSPIAFFAPPELELFF  + +P+
Sbjct: 61  IDGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPD 120

Query: 121 ISV 122
           ISV
Sbjct: 121 ISV 120

[Close]

BLAST of Lcy07g018430 vs. NCBI nr
Match: KAG7010272.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.9 bits (411), Expect = 1.7e-36
Identity = 93/123 (75.61%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 1   MAPSGGKIATRTRRNLPNLKLNKKMKKTKKQPQQQQQQQQKQIPATQNDPAFQFSDDDDD 60
           MAPSGGK+ATRTR NLPNLKLNKK+KKTKK    QQQQ+ KQIPA   + A  F+DD  D
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKK----QQQQKLKQIPAAIPNDAVHFTDDSTD 60

Query: 61  -DGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF-FVALPN 120
            DGGCSTPKAERFRIPEILTCPPAPKK R  SDCS RRSPIAFFAPPELELFF  + +P+
Sbjct: 61  IDGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPD 119

Query: 121 ISV 122
           ISV
Sbjct: 121 ISV 119

[Close]

BLAST of Lcy07g018430 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-16
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 62  GGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF 113
           GGC TPKA++ RIPE+LTCPPAPKKQR   +C  RR  I FFAPPE+ELFF
Sbjct: 52  GGCCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of Lcy07g018430 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 61  DGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFFFVAL 117
           + GC TP  E+ RIPE+LTCPPAPKKQ+   +C+ RR  IAFFAPP++ELFF  AL
Sbjct: 57  ESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]

BLAST of Lcy07g018430 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 55  SDDDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELELFF 113
           S+ +D+D   +TP A+  RIP ++ CPPAPKK++     S+   P  FF+PP+LE  F
Sbjct: 46  SNTEDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY--GPREFFSPPDLETVF 101

[Close]

BLAST of Lcy07g018430 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 4.8e-05
Identity = 22/63 (34.92%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 50  PAFQFSDDDDDDGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSPIAFFAPPELE 109
           P    ++ ++ D   +TP A   RIP +  CP APKK++    CS+      +F+PP+LE
Sbjct: 42  PGVTVTETEEQDQCPTTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLE 101

Query: 110 LFF 113
             F
Sbjct: 102 TVF 104

[Close]

BLAST of Lcy07g018430 vs. TAIR 10
Match: AT5G02220.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.4e-04
Identity = 21/53 (39.62%), Postives = 31/53 (58.49%), Query Frame = 0


Query: 63  GCSTPKAERFRIPEILTCPPAPKKQRAVSDCSFRRSP--IAFFAPPELELFFF 114
           GC+TP++  +RIP    CPP P+K+  V     +R P    +F PP+LE  F+
Sbjct: 14  GCTTPRSTMYRIPVASVCPPPPRKKLMVVR---KRDPPRNGYFQPPDLETLFY 63

The following BLAST results are available for this feature:

BLAST of Lcy07g018430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IWB3	2.9e-15	70.59	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q3ECS5	2.1e-13	62.50	Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q1G3Y4	1.6e-05	43.10	Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LNX4	1.8e-04	40.00	Cyclin-dependent protein kinase inhibitor SMR5 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SAD3	6.8e-04	34.92	Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Lcy07g018430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JET4	4.4e-38	78.05	cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FTJ6	9.7e-38	77.24	cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1D3Z6	3.8e-34	74.38	cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3...	[more]
A0A6J1K7R4	2.7e-32	72.03	cyclin-dependent protein kinase inhibitor SMR9-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1H2X7	3.6e-32	69.42	cyclin-dependent protein kinase inhibitor SMR13-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Lcy07g018430 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570398.1	5.3e-38	77.60	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
XP_022986710.1	9.0e-38	78.05	cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima]	[more]
XP_022944116.1	2.0e-37	77.24	cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita moschata]	[more]
XP_023522908.1	5.8e-37	76.42	cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo...	[more]
KAG7010272.1	1.7e-36	75.61	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]

BLAST of Lcy07g018430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20898.1	2.1e-16	70.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G51355.1	1.5e-14	62.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G60783.1	1.1e-06	43.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10690.1	4.8e-05	34.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G02220.1	1.4e-04	39.62	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	PANTHER	PTHR33142:SF8	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 10..116
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 10..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g018430.1	Lcy07g018430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus