Lcy07g018350 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g018350
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
Location	Chr07: 46962458 .. 46964397 (+)
RNA-Seq Expression	Lcy07g018350
Synteny	Lcy07g018350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGAAGAGATGAGTTCGATCAGATCGTTTGTTTCCAGAGAAGAAGCGGTTAATCGGTGGCGAGGATTTTTGTTCATCGTCATCAGCTTCGTTTTTCTTCTGCTATTTCTCTATGCCGCCCTCATTTCCAAGCTTCTTCCACCTTCCGACAACGTCTTCTTCTCTGCTATTCAGAACGACTGGTAACTTTTCTGTTGATCTTCGAGAATTTCTTTATTTGTGTTGTGGAACTCTGGTATTTGGAAAGATCTGAAATCGTTTCCAGTTGTTGGTTAGAATCGAAAAGAATCATTAAAACACGAGGTTCGAAGAAACATTAGTGTTGCTTAGATTTTGAGACAAATTTTCTCTTTCTTTACGTTATTTGGAAGCAGAAGTAGTTGGATTGGATTTCTTGGTTTGATCGAAGAAACAGACGTTCAATTTTCCTACGGAAGTACGTAGTGCTGTATTTGGAAAAGAAGTTCTAATCTCCACTTTAGCAAGTAGCTACTGGTTCGGATGCGTATTGCATTTTGTTCTCCCCTCAATGTCTTTGCATTCATCTCTACTTCCATAACTTTGTTCATTCTTCATGATTGTTGACTTGAATTTGAGTATACTCAACTAGTTAAAACATTATATTCTCAATCAAAATGTTAGAGTTTCAAACCTCCATCCACCCTCATATATTAATAAAACAAAACTATGATTCGACTTAAACTTCAAAGGTGACTTCGAAAATAGGTAGCATACTTAGTTTTCTCTCTATATTACAAATCGTGTTTAGAGAGGGAAGTAGTACCAAGAGCATTTCTGATACAGGGACTGAAAGAAAATAGAGTGGTGAAGCCGTTTATTGAATTGGAAAATGTAGGATACAAGAAAATCGTAGAACTTTGAGAATGAAAGCCAGTAAAGAAACATAGCCACACAACTTGTAGTAATTACTTTCTTTTGGATATCACTTATGACTCTACTGTTTTGATATTCAAGTAGCAACAATATTGTTGCCAAGGAAAGAATGGAGATATCTTTTACAAGTAGTTTGTGGTACGTTGAACATTTGTTACAAAACCAGTAACCCTCCCTGTGTATCTGCATTGGAAGCCTGTCTCATTCTCTCACACACAAAATAATGTATCCATACTAGGAAATGAGTATGTGTGAAACTGATTGCTAGCATGGCTTTGAAGTAAACCAGACACCTGTTAAGAGGACTAGTTTCTTTGCCTACTATTTATTAGCAATGACCTCTATTTGTAATGCCATTTCCTCTTCTTTATTAGGTACTACTGTCTCCTGGTGCCCTTGACATTACCTATCCTTTATGTTGCCATTTATTTCCATTGGCTGAGCATGAAACTATTCAAGCATGCTTGATCTTATAGTCCTAGAAAGATGAACGTCAGCTAATGAACTATTCAAGCCAGTTGGACGCCTAACTCTTGCGAAGATGCAACCACCTTCTATGTTTGATTAAATTACAATGTGACATATTTGGAAATTCAGTACTTGGGGCGATCAAGGATGTATCGATGATTTACTGGAGGCATATATAATAATCAGGCCAAGCGAATTCCACATTGGCAAGTCTCTTGGATTGTTTTTCCGTAGAGGATTTTACCATAGAATTCCATTCTGTGGTTGAATGATGAGGATATGAGGTATTCAAAGTTTCAAACTGAGCAGAAAGGCAAAAGAGTGATTCAAGCATACACTGAATGAGTTGGTGACTGCATCTAAAAGCACAATCTAGAGCAACCAACTTGGGCTTGTGGTTGGCATGGACAATCTTGTACTACTTTGGTTTCATTTATCCTTCTACCAAAATTTGTCAATTTTGTAATGAAAAATGCTCGAGTGCAGAGCTACCTATTTACTTCTGATGGTAATTTTTTAAAAATTGGATGGACAATCTTAGCTTATCTATTTATTTATTTATTAAAATATCACTACAA

mRNA sequence

TTGGAAGAGATGAGTTCGATCAGATCGTTTGTTTCCAGAGAAGAAGCGGTTAATCGGTGGCGAGGATTTTTGTTCATCGTCATCAGCTTCGTTTTTCTTCTGCTATTTCTCTATGCCGCCCTCATTTCCAAGCTTCTTCCACCTTCCGACAACGTCTTCTTCTCTGCTATTCAGAACGACTGGTACTACTGTCTCCTGGTGCCCTTGACATTACCTATCCTTTATGTTGCCATTTATTTCCATTGGCTGAGCATGAAACTATTCAAGCATGCTTGATCTTATAGTCCTAGAAAGATGAACGTCAGCTAATGAACTATTCAAGCCAGTTGGACGCCTAACTCTTGCGAAGATGCAACCACCTTCTATGTTTGATTAAATTACAATGTGACATATTTGGAAATTCAGTACTTGGGGCGATCAAGGATGTATCGATGATTTACTGGAGGCATATATAATAATCAGGCCAAGCGAATTCCACATTGGCAAGTCTCTTGGATTGTTTTTCCGTAGAGGATTTTACCATAGAATTCCATTCTGTGGTTGAATGATGAGGATATGAGGTATTCAAAGTTTCAAACTGAGCAGAAAGGCAAAAGAGTGATTCAAGCATACACTGAATGAGTTGGTGACTGCATCTAAAAGCACAATCTAGAGCAACCAACTTGGGCTTGTGGTTGGCATGGACAATCTTGTACTACTTTGGTTTCATTTATCCTTCTACCAAAATTTGTCAATTTTGTAATGAAAAATGCTCGAGTGCAGAGCTACCTATTTACTTCTGATGGTAATTTTTTAAAAATTGGATGGACAATCTTAGCTTATCTATTTATTTATTTATTAAAATATCACTACAA

Coding sequence (CDS)

ATGAGTTCGATCAGATCGTTTGTTTCCAGAGAAGAAGCGGTTAATCGGTGGCGAGGATTTTTGTTCATCGTCATCAGCTTCGTTTTTCTTCTGCTATTTCTCTATGCCGCCCTCATTTCCAAGCTTCTTCCACCTTCCGACAACGTCTTCTTCTCTGCTATTCAGAACGACTGGTACTACTGTCTCCTGGTGCCCTTGACATTACCTATCCTTTATGTTGCCATTTATTTCCATTGGCTGAGCATGAAACTATTCAAGCATGCTTGA

Protein sequence

MSSIRSFVSREEAVNRWRGFLFIVISFVFLLLFLYAALISKLLPPSDNVFFSAIQNDWYYCLLVPLTLPILYVAIYFHWLSMKLFKHA

Homology

[Close]

BLAST of Lcy07g018350 vs. ExPASy TrEMBL
Match: E5GBS7 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.9e-32
Identity = 71/88 (80.68%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 1  MSSIRSFVSREEAVNRWRGFLFIVISFVFLLLFLYAALISKLLPPSDNVFFSAIQNDWYY 60
          MSSIRS + REEAV R +GF F+V+SF  LL+FLYAA+ISKLLPPS+N F SAIQNDWYY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAIYFHWLSMKLFKHA 89
          CLLVPLTLPILYVA+YFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of Lcy07g018350 vs. ExPASy TrEMBL
Match: A0A0A0KIB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.2e-31
Identity = 70/88 (79.55%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 1  MSSIRSFVSREEAVNRWRGFLFIVISFVFLLLFLYAALISKLLPPSDNVFFSAIQNDWYY 60
          MSSIRS + REE V R +G LF+V+SF+FLL+FLYAA ISKLLPPS+N F SAIQNDW+Y
Sbjct: 1  MSSIRSLIPREETVGRRQGVLFVVVSFLFLLIFLYAAFISKLLPPSNNAFLSAIQNDWHY 60

Query: 61 CLLVPLTLPILYVAIYFHWLSMKLFKHA 89
          CLLVPLTLPILYVA+YFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of Lcy07g018350 vs. ExPASy TrEMBL
Match: A0A7N0RIH6 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.1e-22
Identity = 59/88 (67.05%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1  MSSIRSFVSREEAVNRWRGFLFIVISFVFLLLFLYAALISKLLPPSDNVFFSAIQNDWYY 60
          MS+ +S +S   A N   G + +    +FLL F+YAA+ISKLLPPSDNV  SAIQNDWYY
Sbjct: 1  MSASKS-MSISSAQNVALGLILVGFGILFLLGFIYAAIISKLLPPSDNVIISAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAIYFHWLSMKLFKHA 89
          C LVPLTLPIL VA+YFHWLSMKLFKHA
Sbjct: 61 CFLVPLTLPILVVAVYFHWLSMKLFKHA 87

[Close]

BLAST of Lcy07g018350 vs. ExPASy TrEMBL
Match: A0A2G9H8L1 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13514 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.0e-20
Identity = 58/88 (65.91%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 1  MSSIRSFVSREEAVNRWRGFLFIVISFVFLLLFLYAALISKLLPPSDNVFFSAIQNDWYY 60
          M S+R F+     V  + G+ FI+I     L FLYAA+ISKL PPSDNV   AIQNDWYY
Sbjct: 5  MLSLRDFLVSNGKV--FWGWFFIIIGSFSFLTFLYAAVISKLQPPSDNVVIRAIQNDWYY 64

Query: 61 CLLVPLTLPILYVAIYFHWLSMKLFKHA 89
          C LVPLTLPIL VA+YFHWLSMKLFKHA
Sbjct: 65 CFLVPLTLPILVVAVYFHWLSMKLFKHA 90

[Close]

BLAST of Lcy07g018350 vs. ExPASy TrEMBL
Match: A0A022PQH2 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20
Identity = 57/88 (64.77%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 1  MSSIRSFVSREEAVNRWRGFLFIVISFVFLLLFLYAALISKLLPPSDNVFFSAIQNDWYY 60
          M ++R FV     +  W  F  I  SF F + FLYAA++SKLLPPSDN    AIQNDWYY
Sbjct: 1  MLALREFVDSNGRI-FWGWFFLIFGSFSF-VFFLYAAVVSKLLPPSDNSVIQAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAIYFHWLSMKLFKHA 89
          C LVPLTLPIL+VA+YFHWLSMKLFKHA
Sbjct: 61 CFLVPLTLPILFVAVYFHWLSMKLFKHA 86

[Close]

BLAST of Lcy07g018350 vs. NCBI nr
Match: KAG6605922.1 (hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035870.1 hypothetical protein SDJN02_02669, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.1 bits (388), Expect = 5.7e-34
Identity = 76/88 (86.36%), Postives = 81/88 (92.05%), Query Frame = 0


Query: 1  MSSIRSFVSREEAVNRWRGFLFIVISFVFLLLFLYAALISKLLPPSDNVFFSAIQNDWYY 60
          MSSIRSFVSREEA  RW+GF+FIV+SFVFLLLFLYAA+ISKLL PSDN F SAIQ DWYY
Sbjct: 7  MSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWYY 66

Query: 61 CLLVPLTLPILYVAIYFHWLSMKLFKHA 89
          CLLVPLTLPILY A+YFHWLSMKLFKHA
Sbjct: 67 CLLVPLTLPILYAAVYFHWLSMKLFKHA 94

[Close]

BLAST of Lcy07g018350 vs. NCBI nr
Match: ADN33919.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 145.6 bits (366), Expect = 2.0e-31
Identity = 71/88 (80.68%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 1  MSSIRSFVSREEAVNRWRGFLFIVISFVFLLLFLYAALISKLLPPSDNVFFSAIQNDWYY 60
          MSSIRS + REEAV R +GF F+V+SF  LL+FLYAA+ISKLLPPS+N F SAIQNDWYY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAIYFHWLSMKLFKHA 89
          CLLVPLTLPILYVA+YFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of Lcy07g018350 vs. NCBI nr
Match: PIN13861.1 (hypothetical protein CDL12_13514 [Handroanthus impetiginosus])

HSP 1 Score: 109.0 bits (271), Expect = 2.1e-20
Identity = 58/88 (65.91%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 1  MSSIRSFVSREEAVNRWRGFLFIVISFVFLLLFLYAALISKLLPPSDNVFFSAIQNDWYY 60
          M S+R F+     V  + G+ FI+I     L FLYAA+ISKL PPSDNV   AIQNDWYY
Sbjct: 5  MLSLRDFLVSNGKV--FWGWFFIIIGSFSFLTFLYAAVISKLQPPSDNVVIRAIQNDWYY 64

Query: 61 CLLVPLTLPILYVAIYFHWLSMKLFKHA 89
          C LVPLTLPIL VA+YFHWLSMKLFKHA
Sbjct: 65 CFLVPLTLPILVVAVYFHWLSMKLFKHA 90

[Close]

BLAST of Lcy07g018350 vs. NCBI nr
Match: EYU17719.1 (hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata])

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-20
Identity = 57/88 (64.77%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 1  MSSIRSFVSREEAVNRWRGFLFIVISFVFLLLFLYAALISKLLPPSDNVFFSAIQNDWYY 60
          M ++R FV     +  W  F  I  SF F + FLYAA++SKLLPPSDN    AIQNDWYY
Sbjct: 1  MLALREFVDSNGRI-FWGWFFLIFGSFSF-VFFLYAAVVSKLLPPSDNSVIQAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAIYFHWLSMKLFKHA 89
          C LVPLTLPIL+VA+YFHWLSMKLFKHA
Sbjct: 61 CFLVPLTLPILFVAVYFHWLSMKLFKHA 86

[Close]

BLAST of Lcy07g018350 vs. NCBI nr
Match: KAG7947889.1 (hypothetical protein I3843_14G117500 [Carya illinoinensis])

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-19
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 19  GFLFIVISFVFLLLFLYAALISKLLPPSDNVFFSAIQNDWYYCLLVPLTLPILYVAIYFH 78
           G LFI I  +F + FL+AA++SKLLPPS+N   S IQNDWYYC LVPLTLP+L VA+YFH
Sbjct: 31  GCLFIAIGSIFFVGFLFAAVVSKLLPPSNNALISTIQNDWYYCFLVPLTLPVLVVAVYFH 90

Query: 79  WLSMKLFKHA 89
           WLSMKLFKHA
Sbjct: 91  WLSMKLFKHA 100

The following BLAST results are available for this feature:

BLAST of Lcy07g018350 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g018350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBS7	9.9e-32	80.68	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KIB0	2.2e-31	79.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1	[more]
A0A7N0RIH6	7.1e-22	67.05	Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1	[more]
A0A2G9H8L1	1.0e-20	65.91	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13514 P...	[more]
A0A022PQH2	1.3e-20	64.77	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE...	[more]

BLAST of Lcy07g018350 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605922.1	5.7e-34	86.36	hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sorori...	[more]
ADN33919.1	2.0e-31	80.68	hypothetical protein [Cucumis melo subsp. melo]	[more]
PIN13861.1	2.1e-20	65.91	hypothetical protein CDL12_13514 [Handroanthus impetiginosus]	[more]
EYU17719.1	2.8e-20	64.77	hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata]	[more]
KAG7947889.1	2.3e-19	71.43	hypothetical protein I3843_14G117500 [Carya illinoinensis]	[more]

BLAST of Lcy07g018350 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029164	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y	PFAM	PF15159	PIG-Y	coord: 19..87 e-value: 3.0E-16 score: 60.1
None	No IPR available	PANTHER	PTHR36485	OS01G0939000 PROTEIN	coord: 14..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g018350.1	Lcy07g018350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016757	glycosyltransferase activity