Lcy07g016180 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g016180
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description40S ribosomal protein S23
LocationChr07: 44961331 .. 44965092 (-)
RNA-Seq ExpressionLcy07g016180
SyntenyLcy07g016180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCTCGTCCTCCAACTTCCTACAGCTTTTGGTGCAGGAGGTATGAGGAGGCAAATCTTTGCAAAATCTTCAGACATTGCTTGAGGAGGAGGTGAAGGAAATTGTTATTCAGACCATATAGCAAAGGTGCTGGGAAAGTGAATTTCTTTATAGCCTCGAGTACAAAAGTTTCAACACTCAAAAGACAAAATTCAAAGGAAAAATCCTCGCATGTCCCTTCTTCCTCAAGTTTGTGCAGTATGAGCAAGGAAAAAGCCATAAATCACCTCTTCTTTTGGCTGTTATTTGTCTGTGTATAGTTTCAATGGCTTGTTGTTTGCATAAAGATTTAAACGTGGTGTTCTTTTATTATTTCCGCTCGTGTGACAACTTTTTGTTTGAGCATCCCTAGAGCTATCTTTTGGTTGATTTGGATTGGCTATTAGAAGGAAACTCTAAGATGTTTAGCTCAACTGTTAAAGCATATGTCTTCGACCAAAAGGTTAGAAGTTCAAATCCTCTGATGTGTTTATAATAAATATGGTTAGTTTTTACATATGTAAGTTCATCTTTTATTTTATTAGGTACACCATTTGATTCCCTAAAGTATGTCCTTTTTTATCCGTCTATCTTCTTGACCAAAGCTGGTTTTCATATATTTTGTGTGGTTAAAGTGACATAATTTTTCTGTTGAATGTACTATGAAGTTTAACTAAAAACATTAAAAATACATATTTTTAGAAGTGTATGGATTGAAATAGAAAACTAGAGTAAGATTTTTATAGAAAAAAAATTCCTATGGTTGCATTTGACCAAATTAGTCCATTCAATTCTTTTTTTTAGTTCAACACTCGGGGAGAGAGGATTCGAACTTATAACTTTTTAATCAATGATTGAACTAGTTTTACTTTAGTCAACTTTTATAGTCGTAAATCGTAATTTCATCAAATTGAAATTTAACATGAGTGGTCAAATTAATGACTTTTAACCAAAAAAAAAAACATTATTTTTAATTTATTTTGCTATTAAGAAAACTTAACTAATTTATGATAAATTTGAGTCTACTTCAGGAGATAATGATCAATTATCATTTCAAGGAGATGGTTCAATCCCACAATTATTGAACCAAAAAAAAAAAAGTAATTTATAAGTTATTTTTTGCTTGAGTTTATGGGTGCGAGACTTTCATCCACTATTTAAATTCAGGGTCTGTTTGGAATACATTTTAATTTAAATGTTTTTCAAGAATGCATTTTTTAAAAAACATTGTGTATAAAAATTGTTTAGAATTTAAACACTCGTATGTTTGGTTGTATTTCCTCACAAATGTTTTTATAAACAAGTTATTGTTTACGTAAGAAATCTTTTTTTAAAAGTTGGTTTCAAGTATTTCTCTCAAAATGGTTTATTTATCAATCTCATTTTCTAATAAGCCATTTTTAGTGGTTGCCAAACATTATAAATTTTTTCAAAATGATTTATTTTCAAAATTAAACACTTCAAAAGTTAAACAAAAAACACCCTCAAAATTCTTTTTGATTAAAATTTTAAAGATAAAATTGATTAACTTGTAACTAGGGTAGTTCTAAAGGGGGGAAAAAATGGAAACTAGGAACAGTTATACATTGCAATTTTTTTTTTTTTTTTTTTTAATTATACGTTGCAATTTGCAAGGAAGTACTGAAAAAGAAAAAAAGAAGCTAATAAATAAATAAATAAACAAAATAAAAAGCTCTTTTAAATAGCCCGCTGCCGACGTGGCAACTTAGAAGTATTACAGTGGGGATTGGTTTAGCAAAGACCCCTACAGTATAAAAAGGGGCCAACAAGCCCTAGGGTTTCATTCACAGACGTTGCGGCGGCGTCATTCAAATCATCTTCGTCTCTACCGGTTCCGGAACTCTTCTGTTCTAATCTCGCACTCGGAGATCCTCTTCTCACACTCACCATGGGGTAAGTCCTCTTTCCATGCTTTTAGTCTGTTTCTCTCCATTGTTCATTGAGATGAATGTTCGGAAGTAGAAGATTTAGTCGAGATTTGCATAGCTTTACTGGACTACATCCATTTGAAAGATCGAACAATTAAATGCTATTCTACAAACGGGAATGGTTAATATTAGCTTATCGTAGATGATGAATATGTTGAGCTCCATGGCAATGGCGAAGAGGGATGAGTTGCACTGCCTATTTGTTGTGCTCTCAACCCGAAGTAATGTTTTTTTGTTTTTTATTGTCATTGTGATCATGTTTGTGTCTGATAATCGTCCATTCGTTTCTGGATGTGGGGATGGCAGTCGTTCTAGATGTCTAAGTTTTAGGATATGACCAAGCACCTAGTTTTAGTATGAACATGTCGGTGGCTGTGATTTTATTTCGATTTAACGAATTTTTACAGCAATAATTGGATTTTTTTTTTTGAAAAAAGCAATAATTGGATTTTACCTGTTGTTTGTCTTAAAAACAATTTACGTTGTTTCTCTATCATATTGGAAAAATTGGCGTTGCTTAGTACAAGCGTTCTTGATGGTACGAGTATCCTTATGACTTAGAGAAAGGATTGGTGTGAATCTAGTTTTTTTTTGGAAGTCAGGTTTTATTGCGATAATTGTTTCAGATGTCAATATTTCAAACTAATGATCATACTAGATGTTTTATTAGTTAGTAGAGTTAAATATAGAGGAAAGAATTGACCAGGCTTTCAGGGTGTTGGGTATTGAGAAAAATCTCCATGATTCTATGTTTTATGTTTTGATGCAAATTGGCGGTTGTATTCTCTTTGTTAAAGTAGTAGTAATATCTTACAGGAAGACACGTGGAATGGGAGCTGGTCGCAAGTTGAAGTCCCACCGTAGAAGGCAAAGGTGGGCTGACAAAGCATACAAGAAATCCCATCTTGGGAACGAGTGGAAGAAACCATTTGCCGGATCTTCCCATGCTAAAGGCATTGTTCTAGAAAAGATGTAAGAGGATTTTATTTGTGCTGTGCTTTAGAGGCTACTTATAAAAAACTTAATCTAACAAGTAATATTTTGGCACAATTTGCAGTGGTATTGAGGCCAAGCAGCCTAACTCTGCTATTAGGAAGTGTGCTAGAGTTCAGCTTATTAAGAACGGGAAGAAGATTGCTGCCTTTGTGCCCAATGATGGTTGTTTGAACTACATTGAAGAGAATGTAAGTATACTTGAGGGAAGCTTGGGATTTTGGTTACTATTACCTCTATTTATTTTTTGTTCTATTTTTGCTATAACATGTATTGTCATGAACAGGACGAGGTGCTCATTGCTGGATTTGGTAGAAAAGGACATGCTGTCGGAGATATTCCTGGAGTCAGATTTAAGGTGGTGAAGGTGTCTGGTGTATCTCTTCTGGCTCTCTTCAAGGAAAAGAAGGAGAAGCCAAGGTCTTAAGCTTCTTGGTTTTCCAAGATTGATTTTGTCTCTATTTTCTTCAATTCGTGCAAGAGGCAATTGATGAGCAATTGTGATGCTTTTCCTCTTTGTCACTAGTTGAGTTAGATTACTCGGTCCACCCTAGAAACTTTTGAGCTGCAATCCTGTTGTTGAGACTTAATTAATACAAGCATAATTTTCTTTGCAATCAGAACAGATTCTGTTATGATTAATTTGAGTGTAACATCGCCCCTTCCCTTTCCAATCAAAATCTCTGGAAGTTCTCTTGAAATTATTCCTGCTTGATTCTAGTGTGAATGTCTACTTGCATCTTCTAATTGTCAGGAAGGAATCCTGGGGCATAAAATCTATTGTACGCTGTCGATTCTGA

mRNA sequence

ATGGTCTCGTCCTCCAACTTCCTACAGCTTTTGGTGCAGGAGCAAAGACCCCTACAGTATAAAAAGGGGCCAACAAGCCCTAGGGTTTCATTCACAGACGTTGCGGCGGCGTCATTCAAATCATCTTCGTCTCTACCGGTTCCGGAACTCTTCTGTTCTAATCTCGCACTCGGAGATCCTCTTCTCACACTCACCATGGGGAAGACACGTGGAATGGGAGCTGGTCGCAAGTTGAAGTCCCACCGTAGAAGGCAAAGGTGGGCTGACAAAGCATACAAGAAATCCCATCTTGGGAACGAGTGGAAGAAACCATTTGCCGGATCTTCCCATGCTAAAGGCATTGTTCTAGAAAAGATGAAGGAATCCTGGGGCATAAAATCTATTGTACGCTGTCGATTCTGA

Coding sequence (CDS)

ATGGTCTCGTCCTCCAACTTCCTACAGCTTTTGGTGCAGGAGCAAAGACCCCTACAGTATAAAAAGGGGCCAACAAGCCCTAGGGTTTCATTCACAGACGTTGCGGCGGCGTCATTCAAATCATCTTCGTCTCTACCGGTTCCGGAACTCTTCTGTTCTAATCTCGCACTCGGAGATCCTCTTCTCACACTCACCATGGGGAAGACACGTGGAATGGGAGCTGGTCGCAAGTTGAAGTCCCACCGTAGAAGGCAAAGGTGGGCTGACAAAGCATACAAGAAATCCCATCTTGGGAACGAGTGGAAGAAACCATTTGCCGGATCTTCCCATGCTAAAGGCATTGTTCTAGAAAAGATGAAGGAATCCTGGGGCATAAAATCTATTGTACGCTGTCGATTCTGA

Protein sequence

MVSSSNFLQLLVQEQRPLQYKKGPTSPRVSFTDVAAASFKSSSSLPVPELFCSNLALGDPLLTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKMKESWGIKSIVRCRF
Homology
[Close]
BLAST of Lcy07g016180 vs. ExPASy Swiss-Prot
Match: P46297 (40S ribosomal protein S23 OS=Fragaria ananassa OX=3747 GN=RPS23 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.7e-22
Identity = 50/54 (92.59%), Postives = 53/54 (98.15%), Query Frame = 0 

Query: 66  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKM 120
           MGKTRGMGA RKLK+HRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 1   MGKTRGMGAARKLKNHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54

[Close]
BLAST of Lcy07g016180 vs. ExPASy Swiss-Prot
Match: Q9M5Z9 (40S ribosomal protein S23 OS=Euphorbia esula OX=3993 GN=RPS23 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.3e-21
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 66  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKM 120
           MGKT GMGA RKLKSHRR QRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 1   MGKTHGMGAARKLKSHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54

[Close]
BLAST of Lcy07g016180 vs. ExPASy Swiss-Prot
Match: P49201 (40S ribosomal protein S23-2 OS=Arabidopsis thaliana OX=3702 GN=RPS23B PE=2 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 9.6e-20
Identity = 48/54 (88.89%), Postives = 49/54 (90.74%), Query Frame = 0 

Query: 66  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKM 120
           MGKTRGMGAGRKLK  R  QRWADK YKKSHLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 1   MGKTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54

[Close]
BLAST of Lcy07g016180 vs. ExPASy Swiss-Prot
Match: Q9SF35 (40S ribosomal protein S23-1 OS=Arabidopsis thaliana OX=3702 GN=RPS23A PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 4.5e-17
Identity = 45/54 (83.33%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 66  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKM 120
           MGKTRGMGAGRKLK  R  QRWADK YKKS+ GNEWKKPFA SSHAKGIVLEK+
Sbjct: 1   MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKI 54

[Close]
BLAST of Lcy07g016180 vs. ExPASy Swiss-Prot
Match: Q9GRJ3 (40S ribosomal protein S23 OS=Lumbricus rubellus OX=35632 GN=RPS23 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-14
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 0 

Query: 66  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKM 120
           MGK RG+   RKLK+HRR QRW DK YKKSHLG  WK  PF G+SHAKGIVLEK+
Sbjct: 1   MGKPRGLRTARKLKNHRREQRWHDKDYKKSHLGTRWKSNPFGGASHAKGIVLEKV 55

[Close]
BLAST of Lcy07g016180 vs. ExPASy TrEMBL
Match: A0A200QHJ3 (Ribosomal protein S12/S23 OS=Macleaya cordata OX=56857 GN=BVC80_1751g75 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22
Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 56  ALGDPLLTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIV 115
           A+ + LLT+ MGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIV
Sbjct: 640 AVEEHLLTVIMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV 699

Query: 116 LEKM 120
           LEK+
Sbjct: 700 LEKI 703

[Close]
BLAST of Lcy07g016180 vs. ExPASy TrEMBL
Match: A0A5B6Z065 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_006978 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22
Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 44  SLPVPELFCSNLALGDPLLTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKK 103
           SLP  +L  S++   +P L+ TMGKTRGMGAGRKLKSHRRRQRWADKAYKKS+LGNEWKK
Sbjct: 11  SLPYSKL-TSSVTGQEPPLSATMGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKK 70

Query: 104 PFAGSSHAKGIVLEKM 120
           PFAGSSHAKGIVLEK+
Sbjct: 71  PFAGSSHAKGIVLEKI 85

[Close]
BLAST of Lcy07g016180 vs. ExPASy TrEMBL
Match: A0A5B7CBP6 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_047868 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22
Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 44  SLPVPELFCSNLALGDPLLTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKK 103
           SLP  +L  S++   +P L+ TMGKTRGMGAGRKLKSHRRRQRWADKAYKKS+LGNEWKK
Sbjct: 17  SLPYSKL-TSSVTGQEPPLSATMGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKK 76

Query: 104 PFAGSSHAKGIVLEKM 120
           PFAGSSHAKGIVLEK+
Sbjct: 77  PFAGSSHAKGIVLEKI 91

[Close]
BLAST of Lcy07g016180 vs. ExPASy TrEMBL
Match: A0A2G5D591 (Uncharacterized protein (Fragment) OS=Aquilegia coerulea OX=218851 GN=AQUCO_02700115v1 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 8.2e-22
Identity = 54/58 (93.10%), Postives = 57/58 (98.28%), Query Frame = 0 

Query: 62  LTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKM 120
           LT+ MGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 31  LTVIMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI 88

[Close]
BLAST of Lcy07g016180 vs. ExPASy TrEMBL
Match: A0A068UE32 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00023642001 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.4e-21
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 0 

Query: 62  LTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKM 120
           LT  MGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 38  LTAIMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKI 95

[Close]
BLAST of Lcy07g016180 vs. NCBI nr
Match: KAG6570758.1 (40S ribosomal protein S23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-24
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0 

Query: 57  LGDPLLTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVL 116
           L DPLL LTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVL
Sbjct: 35  LEDPLLALTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVL 94

Query: 117 EKM 120
           EK+
Sbjct: 95  EKI 97

[Close]
BLAST of Lcy07g016180 vs. NCBI nr
Match: KAG6596454.1 (Interactor of constitutive active ROPs 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-22
Identity = 55/61 (90.16%), Postives = 59/61 (96.72%), Query Frame = 0 

Query: 59  DPLLTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEK 118
           +P+L+  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEK
Sbjct: 599 EPVLSANMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEK 658

Query: 119 M 120
           +
Sbjct: 659 I 659

[Close]
BLAST of Lcy07g016180 vs. NCBI nr
Match: OVA09919.1 (Ribosomal protein S12/S23 [Macleaya cordata])

HSP 1 Score: 115.9 bits (289), Expect = 2.6e-22
Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 56  ALGDPLLTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIV 115
           A+ + LLT+ MGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIV
Sbjct: 640 AVEEHLLTVIMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV 699

Query: 116 LEKM 120
           LEK+
Sbjct: 700 LEKI 703

[Close]
BLAST of Lcy07g016180 vs. NCBI nr
Match: KAF3946178.1 (hypothetical protein CMV_027526, partial [Castanea mollissima])

HSP 1 Score: 114.8 bits (286), Expect = 5.8e-22
Identity = 54/61 (88.52%), Postives = 59/61 (96.72%), Query Frame = 0 

Query: 59  DPLLTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEK 118
           +  L++TMGKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEK
Sbjct: 17  EQFLSVTMGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEK 76

Query: 119 M 120
           +
Sbjct: 77  I 77

[Close]
BLAST of Lcy07g016180 vs. NCBI nr
Match: CBI32689.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 114.8 bits (286), Expect = 5.8e-22
Identity = 58/75 (77.33%), Postives = 64/75 (85.33%), Query Frame = 0 

Query: 45  LPVPELFCSNLALGDPLLTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKP 104
           L +P      LA  + LL++ MGKTRGMGAGRKLKSHRRRQRWADKAYKKS+LGNEWKKP
Sbjct: 27  LLLPPPSSQTLAAVEQLLSVAMGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKP 86

Query: 105 FAGSSHAKGIVLEKM 120
           FAGSSHAKGIVLEK+
Sbjct: 87  FAGSSHAKGIVLEKI 101

[Close]
BLAST of Lcy07g016180 vs. TAIR 10
Match: AT5G02960.1 (Ribosomal protein S12/S23 family protein )

HSP 1 Score: 97.8 bits (242), Expect = 6.9e-21
Identity = 48/54 (88.89%), Postives = 49/54 (90.74%), Query Frame = 0 

Query: 66  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKM 120
           MGKTRGMGAGRKLK  R  QRWADK YKKSHLGNEWKKPFAGSSHAKGIVLEK+
Sbjct: 1   MGKTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKI 54

[Close]
BLAST of Lcy07g016180 vs. TAIR 10
Match: AT3G09680.1 (Ribosomal protein S12/S23 family protein )

HSP 1 Score: 89.0 bits (219), Expect = 3.2e-18
Identity = 45/54 (83.33%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 66  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKM 120
           MGKTRGMGAGRKLK  R  QRWADK YKKS+ GNEWKKPFA SSHAKGIVLEK+
Sbjct: 1   MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKI 54

The following BLAST results are available for this feature:
BLAST of Lcy07g016180 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P462972.7e-2292.5940S ribosomal protein S23 OS=Fragaria ananassa OX=3747 GN=RPS23 PE=2 SV=1[more]
Q9M5Z92.3e-2190.7440S ribosomal protein S23 OS=Euphorbia esula OX=3993 GN=RPS23 PE=2 SV=1[more]
P492019.6e-2088.8940S ribosomal protein S23-2 OS=Arabidopsis thaliana OX=3702 GN=RPS23B PE=2 SV=2[more]
Q9SF354.5e-1783.3340S ribosomal protein S23-1 OS=Arabidopsis thaliana OX=3702 GN=RPS23A PE=2 SV=2[more]
Q9GRJ33.6e-1470.9140S ribosomal protein S23 OS=Lumbricus rubellus OX=35632 GN=RPS23 PE=2 SV=1[more]
BLAST of Lcy07g016180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A200QHJ31.3e-2287.50Ribosomal protein S12/S23 OS=Macleaya cordata OX=56857 GN=BVC80_1751g75 PE=3 SV=... [more]
A0A5B6Z0651.7e-2278.95Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_006978... [more]
A0A5B7CBP61.7e-2278.95Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_047868... [more]
A0A2G5D5918.2e-2293.10Uncharacterized protein (Fragment) OS=Aquilegia coerulea OX=218851 GN=AQUCO_0270... [more]
A0A068UE321.4e-2193.10Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00023642001 PE=3 ... [more]
BLAST of Lcy07g016180 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6570758.11.6e-2495.2440S ribosomal protein S23, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6596454.11.5e-2290.16Interactor of constitutive active ROPs 2, chloroplastic, partial [Cucurbita argy... [more]
OVA09919.12.6e-2287.50Ribosomal protein S12/S23 [Macleaya cordata][more]
KAF3946178.15.8e-2288.52hypothetical protein CMV_027526, partial [Castanea mollissima][more]
CBI32689.35.8e-2277.33unnamed protein product, partial [Vitis vinifera][more]
BLAST of Lcy07g016180 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02960.16.9e-2188.89Ribosomal protein S12/S23 family protein [more]
AT3G09680.13.2e-1883.33Ribosomal protein S12/S23 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11652:SF4340S RIBOSOMAL PROTEIN S23coord: 66..120
IPR006032Ribosomal protein S12/S23PANTHERPTHR1165230S RIBOSOMAL PROTEIN S12 FAMILY MEMBERcoord: 66..120

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g016180.1Lcy07g016180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0016301 kinase activity
molecular_function GO:0003735 structural constituent of ribosome