Lcy07g015680 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAACCCGCTCATTCACTTAACCACCGTCAATCAGAACGCCGACAACTCTCCGGCAAGCAGCAGCCTTACTTTCTTCACCGTAAAATCTTCGATCAGTGTTCAATGGAGGCCAGCGGCAAGGCAAAGAAGGGCGCAGGAGGAAGAAGAGGAGGCGAGAAGAAGAAGGCGGTTTCTCGCTCCGTCAAGGCCGGCCTCCAGTTCCCCGTCGGCCGTATCGCTCGTTATCTGAAGAAAGGAAGATACGCTCAGCGTGTCGGCACCGGCGCTCCGGTCTACTTGGCCGCAGTGATGGAGTATCTAGCCGCTGAGGTAACCGAATCGTTATTTTTCTCTTCATCTTCATCCATCTCCTCAGAACCGCCATTGAATCGATCTTCTGTTTATGCAATCTGCAGGTTCTAGAGTTGGCCGGAAATGCCGCAAGAGACAACAAGAAGAACAGGATCATTCCAAGGCACGTGCTATTGGCGATCAGGAACGACGAAGAACTCGGAAAGTTGCTCGCCGGCGTGACTATTGCCAGCGGCGGTGTTCTTCCGAACATCAACCCGGTTCTGTTGCCGAAGAAGACGGATAAGGCCGTGAAAGAGCCGAAATCTCCATCGAAGGCCGGCAAATCTCCATCGAAGGCGGCTTAAACGTTCGATTGCAGAGTTAGGGTTGGATGAATCTGTAATTTATGATCGTCTTTTGAAATTGTTCTTCCCATAGTTCTTTTTTTGTAAGCGTAGACGAAGAATTTAGGGATTTGGAATGCAATACTGTATTCGATATGTCTATTTCACCAATTTACCGGCGAGGAATCGATCTGAAGACTTGTTTTTTGTTACATCCTCAGAATATTATTTCCAGCTTTATTCTTAATTTTCTCCGTAACAAGCAATACAATAAAGATTAAGATGAAGCGTAAATGGATTTGCTTGCTATGTGGATTTGAAAAT CAAACCCGCTCATTCACTTAACCACCGTCAATCAGAACGCCGACAACTCTCCGGCAAGCAGCAGCCTTACTTTCTTCACCGTAAAATCTTCGATCAGTGTTCAATGGAGGCCAGCGGCAAGGCAAAGAAGGGCGCAGGAGGAAGAAGAGGAGGCGAGAAGAAGAAGGCGGTTTCTCGCTCCGTCAAGGCCGGCCTCCAGTTCCCCGTCGGCCGTATCGCTCGTTATCTGAAGAAAGGAAGATACGCTCAGCGTGTCGGCACCGGCGCTCCGGTCTACTTGGCCGCAGTGATGGAGTATCTAGCCGCTGAGGTTCTAGAGTTGGCCGGAAATGCCGCAAGAGACAACAAGAAGAACAGGATCATTCCAAGGCACGTGCTATTGGCGATCAGGAACGACGAAGAACTCGGAAAGTTGCTCGCCGGCGTGACTATTGCCAGCGGCGGTGTTCTTCCGAACATCAACCCGGTTCTGTTGCCGAAGAAGACGGATAAGGCCGTGAAAGAGCCGAAATCTCCATCGAAGGCCGGCAAATCTCCATCGAAGGCGGCTTAAACGTTCGATTGCAGAGTTAGGGTTGGATGAATCTGTAATTTATGATCGTCTTTTGAAATTGTTCTTCCCATAGTTCTTTTTTTGTAAGCGTAGACGAAGAATTTAGGGATTTGGAATGCAATACTGTATTCGATATGTCTATTTCACCAATTTACCGGCGAGGAATCGATCTGAAGACTTGTTTTTTGTTACATCCTCAGAATATTATTTCCAGCTTTATTCTTAATTTTCTCCGTAACAAGCAATACAATAAAGATTAAGATGAAGCGTAAATGGATTTGCTTGCTATGTGGATTTGAAAAT ATGGAGGCCAGCGGCAAGGCAAAGAAGGGCGCAGGAGGAAGAAGAGGAGGCGAGAAGAAGAAGGCGGTTTCTCGCTCCGTCAAGGCCGGCCTCCAGTTCCCCGTCGGCCGTATCGCTCGTTATCTGAAGAAAGGAAGATACGCTCAGCGTGTCGGCACCGGCGCTCCGGTCTACTTGGCCGCAGTGATGGAGTATCTAGCCGCTGAGGTTCTAGAGTTGGCCGGAAATGCCGCAAGAGACAACAAGAAGAACAGGATCATTCCAAGGCACGTGCTATTGGCGATCAGGAACGACGAAGAACTCGGAAAGTTGCTCGCCGGCGTGACTATTGCCAGCGGCGGTGTTCTTCCGAACATCAACCCGGTTCTGTTGCCGAAGAAGACGGATAAGGCCGTGAAAGAGCCGAAATCTCCATCGAAGGCCGGCAAATCTCCATCGAAGGCGGCTTAA MEASGKAKKGAGGRRGGEKKKAVSRSVKAGLQFPVGRIARYLKKGRYAQRVGTGAPVYLAAVMEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIASGGVLPNINPVLLPKKTDKAVKEPKSPSKAGKSPSKAA Homology
BLAST of Lcy07g015680 vs. ExPASy Swiss-Prot
Match: P19177 (Histone H2A OS=Petroselinum crispum OX=4043 PE=2 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 2.7e-63 Identity = 130/149 (87.25%), Postives = 139/149 (93.29%), Query Frame = 0
BLAST of Lcy07g015680 vs. ExPASy Swiss-Prot
Match: Q2HU68 (Probable histone H2A.1 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 3.3e-61 Identity = 125/148 (84.46%), Postives = 135/148 (91.22%), Query Frame = 0
BLAST of Lcy07g015680 vs. ExPASy Swiss-Prot
Match: Q2HU65 (Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.1e-59 Identity = 128/153 (83.66%), Postives = 140/153 (91.50%), Query Frame = 0
BLAST of Lcy07g015680 vs. ExPASy Swiss-Prot
Match: Q9M531 (Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 9.0e-59 Identity = 127/153 (83.01%), Postives = 135/153 (88.24%), Query Frame = 0
BLAST of Lcy07g015680 vs. ExPASy Swiss-Prot
Match: P40281 (Histone H2A.2 OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.2e-58 Identity = 123/149 (82.55%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Lcy07g015680 vs. ExPASy TrEMBL
Match: A0A6J1FUE6 (Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111448508 PE=3 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lcy07g015680 vs. ExPASy TrEMBL
Match: A0A6J1J904 (Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111484538 PE=3 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 4.5e-69 Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of Lcy07g015680 vs. ExPASy TrEMBL
Match: A0A1S3BK65 (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103490586 PE=3 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68 Identity = 145/149 (97.32%), Postives = 145/149 (97.32%), Query Frame = 0
BLAST of Lcy07g015680 vs. ExPASy TrEMBL
Match: A0A6J1L1N2 (Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111499596 PE=3 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 6.5e-68 Identity = 142/149 (95.30%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of Lcy07g015680 vs. ExPASy TrEMBL
Match: A0A6J1G6M6 (Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111451351 PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67 Identity = 141/149 (94.63%), Postives = 146/149 (97.99%), Query Frame = 0
BLAST of Lcy07g015680 vs. NCBI nr
Match: XP_022943937.1 (histone H2A [Cucurbita moschata] >XP_023512023.1 histone H2A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271.9 bits (694), Expect = 3.2e-69 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lcy07g015680 vs. NCBI nr
Match: XP_022986957.1 (histone H2A [Cucurbita maxima]) HSP 1 Score: 270.4 bits (690), Expect = 9.3e-69 Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of Lcy07g015680 vs. NCBI nr
Match: XP_008448380.1 (PREDICTED: histone H2A [Cucumis melo]) HSP 1 Score: 269.2 bits (687), Expect = 2.1e-68 Identity = 145/149 (97.32%), Postives = 145/149 (97.32%), Query Frame = 0
BLAST of Lcy07g015680 vs. NCBI nr
Match: XP_023006960.1 (histone H2A-like [Cucurbita maxima]) HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67 Identity = 142/149 (95.30%), Postives = 147/149 (98.66%), Query Frame = 0
BLAST of Lcy07g015680 vs. NCBI nr
Match: XP_022947502.1 (histone H2A-like [Cucurbita moschata] >KAG6605479.1 hypothetical protein SDJN03_02796, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035421.1 hypothetical protein SDJN02_02217 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 265.0 bits (676), Expect = 3.9e-67 Identity = 141/149 (94.63%), Postives = 146/149 (97.99%), Query Frame = 0
BLAST of Lcy07g015680 vs. TAIR 10
Match: AT5G02560.1 (histone H2A 12 ) HSP 1 Score: 222.2 bits (565), Expect = 2.7e-58 Identity = 123/153 (80.39%), Postives = 134/153 (87.58%), Query Frame = 0
BLAST of Lcy07g015680 vs. TAIR 10
Match: AT5G02560.2 (histone H2A 12 ) HSP 1 Score: 208.8 bits (530), Expect = 3.1e-54 Identity = 123/177 (69.49%), Postives = 134/177 (75.71%), Query Frame = 0
BLAST of Lcy07g015680 vs. TAIR 10
Match: AT5G27670.1 (histone H2A 7 ) HSP 1 Score: 205.7 bits (522), Expect = 2.6e-53 Identity = 113/147 (76.87%), Postives = 129/147 (87.76%), Query Frame = 0
BLAST of Lcy07g015680 vs. TAIR 10
Match: AT5G59870.1 (histone H2A 6 ) HSP 1 Score: 199.5 bits (506), Expect = 1.9e-51 Identity = 111/150 (74.00%), Postives = 126/150 (84.00%), Query Frame = 0
BLAST of Lcy07g015680 vs. TAIR 10
Match: AT1G51060.1 (histone H2A 10 ) HSP 1 Score: 177.6 bits (449), Expect = 7.6e-45 Identity = 89/112 (79.46%), Postives = 101/112 (90.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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