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Lcy07g015630 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCAGCCCTCAATTTTCTCCCAAACCCTTCAGCCTCGACGAAACTGCGAAACCCTAATTTTCTCAGTCTCTCTTTCGACTTCTGCTTCATCGTTTCTGTTCAATTTCTCTTCGAAGATGGCCGCTCCTTTGGATATGAGTCTTGACGATATCATAAAGAACAACAGAAAATCCAGATCCGGAAATTCTAGAGGTCGCGGAAGAGGTTCCGGACCTGGTCCCGTCCGTCGATTTCCCAATCGCGCCGCCAATCGTACACCTTATTCTGCTCCCAAGGTATTGTTTCGAGTTTCCGTTCGCTTCTTTTCTATTTTAGGTAGCTTCGGGGTTTGGTTCGGTTTATCCCGATTTTCCCATTCCGAATTATCGATTGAAGTTTTGTTTTGATGGTTTTGATTTGTGAAATTTGTTGTTAGGCGCCGGAGACGACTTGGCAGCATGATATGTTTGTCGATCAGGGTTCGGGGTTCCCTATGCAAGCTGGGCGAGCCCCTGCCATTCAGACTGGGACTAAGCTTTACATATCTAATTTGGATTACGGTGTTTCTAACGAAGATATTAAGGTATTTATACTTCTTGTGATTGTGTGAAAAGAGAAGAGACGATACCTTTTTGCCTTGCTGAAAGTGGTGATGTTTGCAGGAACTTTTTTCTGAGGTTGGTGATATGAAACGCTACGGAATCCACTATGACAAAAGTGGAAGATCCAAGGTATTCTACGAGGCCTGGCGTAATACTGGTTCTAGTGAATTGTTTATGTTGGTCGAAGTTTAGAAATCCTCTTTTCCATAGGGAACGGCAGAAGTAGTTTTCTCACGAAGAACAGATGCTGTGGCGGCTGTCAAGAAGTACAACAACGTGCAACTTGATGGAAAACCAATGAAGATAGAGATCGTTGGGACTAATATTGCCACACCTGCTGTTGGTCCTCCCGCTGCTGTCAACCCCTTTGAAAATTTAAATGGGGCTCCTCCTAGAAGGTATTGATCGTATTTTATATTTATGCTCAGTTCCTTGGTACAGGGGGTTCATATGCTAACGGGGTGTATTGATCATGTTTGGATTTCATGTGATGTGATATTAGCTGTTTTCTTTTTCTTGTACTGGTGAGTTTCTAATACAGCCTGCTCATCGCAGTTGGAGTAGTGAACAACTTATGTATATGGTTTATTTTAGGTTGTAGTATAGTATGTCTACTCCGGGAAATCTGCTCTTTGCTCGTTGTTTAGATTAATGAACTTTATTCAGTGTATTTTTCTTTACTTGAATCACATTTTTAAAGCTTTTTATAATGATATGGACTATGGGAACCATTTTTTTTTCTTTAATATGCACTTGTATCCAAAGCTCTTTATTATTTTCAGCCGAGTTTGTCTGGGTTTGGTGACATTCATTTTATAATAGGGGTACCATCCTCTCAGTCATCCTATTTTATATTGACATTCTTTTTAATGTGAAACAGGCAACAAGGTAGGGGTGGAATGCCATCACGTCAACGTGGTGGGGGTGGTGGTCGTGGTTTTGGAAGGGGGCGTGGGCGGGGAAGAGGCCCAAGTGAAAAGGTGTCTGCTGAAGATCTCGATGCCGACTTGGAAAAGTATCATGCTGAGTCTATGCAAATAAATTAATGGATTCGTATATGCTTTGGTTCAATCACCATCATCTGTTCTCTGTATCACCACCATTGTCTAGACTTCGCAGAAAGGGGCTATAGTTTTCCTTAGATTTTGTTTGAATTTCTTTACAGCATTTGGGCTTTCTATTGTTTAGCTTTCATATGACTTCAGCATGGTAATGTAATTGACGAACAGTAGTCAGTGTGTACTCTTTCATTCATTAAGTCCTTTCTGTTTCCTTTAATGAGTTGGGAATCAAAGTGGATCTACTATTACCCCTTTGCCTGATCACATCTGCAAGGATGACATTGGTTGGATTAAAATGCTACCCACAGCTGAAAATTTATAACAAATGAGTTGCGGTTCCCTATCGAGGTAAATATCTTTTTTCTTGTGTAGTTGAATTCCGTAAAATTTTCCTCATAATTTCTAACAAATTCGTTATTTCTCTTTAAATGTGTTTTTGCAGGGAACTTCGACTCTATAAAACCAATATGTAGGCATGAAGTATTGAACTTGTTGAGAGTTGGCTAACGTGCTAAAAGATGAACAGTCTTCATAGCTATGGCATCCGACTCAAGTCAAATTATTTTAAGAAAGTACCAAGAAGAATTTGTTGCCTTCTTGGTCTATGGAATCTTCATCTTTGCCTGCGTTTTATCGAAAAAAATGCCTGCTAACTGGTGATATCCTTATTTTAAAGTAATTGTTGGTCAAACATACAACGTGGTGGTATTCTACTGCTGTGCTTGTGGAGAAATTCCACAGAGCAATTCGCCGCAACATGAAGGCGGGCGCATTTCAGGTACCATACCATCACTGTTGAGGACTCTTACAAGTTTTTGATTTCTGCTCGAGTGGTGCTAGCACATGGTATCTCCCTCCTTAGATGATGGATGGCATCATGAGATTTTGGCCATTGAATGAGCGGTAAAAACTTGGTCTCTCAGGAATCATTTAAATACACACATTTGCATTTGTTTGAATAGTTAAAAACAACCTGACTGTGGATTCTGTGCCTATATTATTGTAGTGTAGTGGAGTAATGTCATTGGATTTTTATATGATTGTTTTTAGAACGCATAGCAGCAATTGCGCAATTGGCCGATGCAAGTGTGTTGATTTCAACTTCTTCATACTTATCCCCATTGATTTAAGCGACAGGAGTTGCCTTATCTCAAAGCTTCGGCCAGTTATGATGGCTTAATGTTTAGTAATATATATCTGGATTTGTTTCTGTATTGGTACATGCTGTAATGTGTGTTGGTTGATTTATGGGTGATAAATGTTCCTTAATTGTGGAGCTGGTTTTAAACAATCCGGTTGACTATATCTAATTTTGTTAGAAAATTTTCTGGATTGCACAATTTTGGTTTGTAATTTGCAAGTGTTTTTAAGTTTATTCATTGTCCTTTATATTATAGTACTTGGACAAGAGTTGGATTTTTGTTTTGTTCAGGAAATTTTTTGTGATAAATTCCTTTTTACAATCTTTTGATTTTGATGTCAAATCACTGAAATAAAATATGAGATTGAAATTCTAAGACTCCATACCTGAAAGTGATATTGCAATTAAATATGGTCATAAATGCTTTATCTACTTAGAACAGCAAAGCATGTCGAGAATCCCACTTTATGAATGTACATGTGATTGCATGGTGGACCCAGATTGTCATTGCTTGGAAGACAGCGACAATCAAAGACATTCAATACATGTTGGATTGTGAAGTGTAATCATTCAGGCAATAGTGCTATGCCTAATCCCCAACTTTTATCTTGTCTATTTTATTTCTGCGCTATAAGTCTGGAAAATTTCTAGTACTATGGCATACTACCTTCATTCATTGT CTTCAGCCCTCAATTTTCTCCCAAACCCTTCAGCCTCGACGAAACTGCGAAACCCTAATTTTCTCAGTCTCTCTTTCGACTTCTGCTTCATCGTTTCTGTTCAATTTCTCTTCGAAGATGGCCGCTCCTTTGGATATGAGTCTTGACGATATCATAAAGAACAACAGAAAATCCAGATCCGGAAATTCTAGAGGTCGCGGAAGAGGTTCCGGACCTGGTCCCGTCCGTCGATTTCCCAATCGCGCCGCCAATCGTACACCTTATTCTGCTCCCAAGGCGCCGGAGACGACTTGGCAGCATGATATGTTTGTCGATCAGGGTTCGGGGTTCCCTATGCAAGCTGGGCGAGCCCCTGCCATTCAGACTGGGACTAAGCTTTACATATCTAATTTGGATTACGGTGTTTCTAACGAAGATATTAAGGAACTTTTTTCTGAGGTTGGTGATATGAAACGCTACGGAATCCACTATGACAAAAGTGGAAGATCCAAGGGAACGGCAGAAGTAGTTTTCTCACGAAGAACAGATGCTGTGGCGGCTGTCAAGAAGTACAACAACGTGCAACTTGATGGAAAACCAATGAAGATAGAGATCGTTGGGACTAATATTGCCACACCTGCTGTTGGTCCTCCCGCTGCTGTCAACCCCTTTGAAAATTTAAATGGGGCTCCTCCTAGAAGGCAACAAGGTAGGGGTGGAATGCCATCACGTCAACGTGGTGGGGGTGGTGGTCGTGGTTTTGGAAGGGGGCGTGGGCGGGGAAGAGGCCCAAGTGAAAAGGTGTCTGCTGAAGATCTCGATGCCGACTTGGAAAAGTATCATGCTGAGTCTATGCAAATAAATTAATGGATTCGTATATGCTTTGGTTCAATCACCATCATCTGTTCTCTGTATCACCACCATTGTCTAGACTTCGCAGAAAGGGGCTATAGTTTTCCTTAGATTTTGTTTGAATTTCTTTACAGCATTTGGGCTTTCTATTGTTTAGCTTTCATATGACTTCAGCATGGTAATGTAATTGACGAACAGTAGTCAGTGTGTACTCTTTCATTCATTAAGTCCTTTCTGTTTCCTTTAATGAGTTGGGAATCAAAGTGGATCTACTATTACCCCTTTGCCTGATCACATCTGCAAGGATGACATTGGTTGGATTAAAATGCTACCCACAGCTGAAAATTTATAACAAATGAGTTGCGGTTCCCTATCGAGGGAACTTCGACTCTATAAAACCAATATGTAGGCATGAAGTATTGAACTTGTTGAGAGTTGGCTAACGTGCTAAAAGATGAACAGTCTTCATAGCTATGGCATCCGACTCAAGTCAAATTATTTTAAGAAAGTACCAAGAAGAATTTGTTGCCTTCTTGGTCTATGGAATCTTCATCTTTGCCTGCGTTTTATCGAAAAAAATGCCTGCTAACTGGTGATATCCTTATTTTAAAGTAATTGTTGGTCAAACATACAACGTGGTGGTATTCTACTGCTGTGCTTGTGGAGAAATTCCACAGAGCAATTCGCCGCAACATGAAGGCGGGCGCATTTCAGGTACCATACCATCACTGTTGAGGACTCTTACAAGTTTTTGATTTCTGCTCGAGTGGTGCTAGCACATGGTATCTCCCTCCTTAGATGATGGATGGCATCATGAGATTTTGGCCATTGAATGAGCGAACGCATAGCAGCAATTGCGCAATTGGCCGATGCAAGTGTGTTGATTTCAACTTCTTCATACTTATCCCCATTGATTTAAGCGACAGGAGTTGCCTTATCTCAAAGCTTCGGCCAGTTATGATGGCTTAATGTTTAGTAATATATATCTGGATTTGTTTCTGTATTGGTACATGCTGTAATGTGTGTTGGTTGATTTATGGGTGATAAATGTTCCTTAATTGTGGAGCTGGTTTTAAACAATCCGGTTGACTATATCTAATTTTGTTAGAAAATTTTCTGGATTGCACAATTTTGGTTTGTAATTTGCAAGTGTTTTTAAGTTTATTCATTGTCCTTTATATTATAGTACTTGGACAAGAGTTGGATTTTTGTTTTGTTCAGGAAATTTTTTGTGATAAATTCCTTTTTACAATCTTTTGATTTTGATGTCAAATCACTGAAATAAAATATGAGATTGAAATTCTAAGACTCCATACCTGAAAGTGATATTGCAATTAAATATGGTCATAAATGCTTTATCTACTTAGAACAGCAAAGCATGTCGAGAATCCCACTTTATGAATGTACATGTGATTGCATGGTGGACCCAGATTGTCATTGCTTGGAAGACAGCGACAATCAAAGACATTCAATACATGTTGGATTGTGAAGTGTAATCATTCAGGCAATAGTGCTATGCCTAATCCCCAACTTTTATCTTGTCTATTTTATTTCTGCGCTATAAGTCTGGAAAATTTCTAGTACTATGGCATACTACCTTCATTCATTGT ATGGCCGCTCCTTTGGATATGAGTCTTGACGATATCATAAAGAACAACAGAAAATCCAGATCCGGAAATTCTAGAGGTCGCGGAAGAGGTTCCGGACCTGGTCCCGTCCGTCGATTTCCCAATCGCGCCGCCAATCGTACACCTTATTCTGCTCCCAAGGCGCCGGAGACGACTTGGCAGCATGATATGTTTGTCGATCAGGGTTCGGGGTTCCCTATGCAAGCTGGGCGAGCCCCTGCCATTCAGACTGGGACTAAGCTTTACATATCTAATTTGGATTACGGTGTTTCTAACGAAGATATTAAGGAACTTTTTTCTGAGGTTGGTGATATGAAACGCTACGGAATCCACTATGACAAAAGTGGAAGATCCAAGGGAACGGCAGAAGTAGTTTTCTCACGAAGAACAGATGCTGTGGCGGCTGTCAAGAAGTACAACAACGTGCAACTTGATGGAAAACCAATGAAGATAGAGATCGTTGGGACTAATATTGCCACACCTGCTGTTGGTCCTCCCGCTGCTGTCAACCCCTTTGAAAATTTAAATGGGGCTCCTCCTAGAAGGCAACAAGGTAGGGGTGGAATGCCATCACGTCAACGTGGTGGGGGTGGTGGTCGTGGTTTTGGAAGGGGGCGTGGGCGGGGAAGAGGCCCAAGTGAAAAGGTGTCTGCTGAAGATCTCGATGCCGACTTGGAAAAGTATCATGCTGAGTCTATGCAAATAAATTAA MAAPLDMSLDDIIKNNRKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQHDMFVDQGSGFPMQAGRAPAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRYGIHYDKSGRSKGTAEVVFSRRTDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAVGPPAAVNPFENLNGAPPRRQQGRGGMPSRQRGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN Homology
BLAST of Lcy07g015630 vs. ExPASy Swiss-Prot
Match: Q8L773 (THO complex subunit 4A OS=Arabidopsis thaliana OX=3702 GN=ALY1 PE=1 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 2.3e-72 Identity = 159/248 (64.11%), Postives = 189/248 (76.21%), Query Frame = 0
BLAST of Lcy07g015630 vs. ExPASy Swiss-Prot
Match: Q8L719 (THO complex subunit 4B OS=Arabidopsis thaliana OX=3702 GN=ALY2 PE=1 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 1.9e-61 Identity = 162/291 (55.67%), Postives = 182/291 (62.54%), Query Frame = 0
BLAST of Lcy07g015630 vs. ExPASy Swiss-Prot
Match: Q6NQ72 (THO complex subunit 4D OS=Arabidopsis thaliana OX=3702 GN=ALY4 PE=1 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 5.1e-43 Identity = 125/295 (42.37%), Postives = 163/295 (55.25%), Query Frame = 0
BLAST of Lcy07g015630 vs. ExPASy Swiss-Prot
Match: Q3T0I4 (THO complex subunit 4 OS=Bos taurus OX=9913 GN=ALYREF PE=2 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 4.3e-42 Identity = 121/271 (44.65%), Postives = 152/271 (56.09%), Query Frame = 0
BLAST of Lcy07g015630 vs. ExPASy Swiss-Prot
Match: Q86V81 (THO complex subunit 4 OS=Homo sapiens OX=9606 GN=ALYREF PE=1 SV=3) HSP 1 Score: 171.0 bits (432), Expect = 1.6e-41 Identity = 120/271 (44.28%), Postives = 152/271 (56.09%), Query Frame = 0
BLAST of Lcy07g015630 vs. ExPASy TrEMBL
Match: A0A6J1G721 (THO complex subunit 4A-like OS=Cucurbita moschata OX=3662 GN=LOC111451345 PE=4 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 1.5e-117 Identity = 225/242 (92.98%), Postives = 230/242 (95.04%), Query Frame = 0
BLAST of Lcy07g015630 vs. ExPASy TrEMBL
Match: A0A6J1L1M6 (THO complex subunit 4A-like OS=Cucurbita maxima OX=3661 GN=LOC111499593 PE=4 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 4.2e-117 Identity = 224/242 (92.56%), Postives = 229/242 (94.63%), Query Frame = 0
BLAST of Lcy07g015630 vs. ExPASy TrEMBL
Match: A0A0A0KBU2 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G193610 PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.8e-115 Identity = 222/242 (91.74%), Postives = 226/242 (93.39%), Query Frame = 0
BLAST of Lcy07g015630 vs. ExPASy TrEMBL
Match: A0A1S3BK70 (THO complex subunit 4A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490589 PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 5.2e-115 Identity = 222/242 (91.74%), Postives = 226/242 (93.39%), Query Frame = 0
BLAST of Lcy07g015630 vs. ExPASy TrEMBL
Match: A0A6J1D4W8 (THO complex subunit 4A-like OS=Momordica charantia OX=3673 GN=LOC111017043 PE=4 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 4.4e-114 Identity = 223/244 (91.39%), Postives = 228/244 (93.44%), Query Frame = 0
BLAST of Lcy07g015630 vs. NCBI nr
Match: XP_038901991.1 (THO complex subunit 4A-like [Benincasa hispida]) HSP 1 Score: 433.0 bits (1112), Expect = 1.8e-117 Identity = 226/242 (93.39%), Postives = 228/242 (94.21%), Query Frame = 0
BLAST of Lcy07g015630 vs. NCBI nr
Match: KAG7035419.1 (THO complex subunit 4A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 432.2 bits (1110), Expect = 3.0e-117 Identity = 225/242 (92.98%), Postives = 230/242 (95.04%), Query Frame = 0
BLAST of Lcy07g015630 vs. NCBI nr
Match: XP_022947495.1 (THO complex subunit 4A-like [Cucurbita moschata]) HSP 1 Score: 432.2 bits (1110), Expect = 3.0e-117 Identity = 225/242 (92.98%), Postives = 230/242 (95.04%), Query Frame = 0
BLAST of Lcy07g015630 vs. NCBI nr
Match: XP_023006955.1 (THO complex subunit 4A-like [Cucurbita maxima]) HSP 1 Score: 430.6 bits (1106), Expect = 8.7e-117 Identity = 224/242 (92.56%), Postives = 229/242 (94.63%), Query Frame = 0
BLAST of Lcy07g015630 vs. NCBI nr
Match: XP_023532287.1 (THO complex subunit 4A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116 Identity = 224/242 (92.56%), Postives = 229/242 (94.63%), Query Frame = 0
BLAST of Lcy07g015630 vs. TAIR 10
Match: AT5G59950.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 273.5 bits (698), Expect = 1.7e-73 Identity = 159/248 (64.11%), Postives = 189/248 (76.21%), Query Frame = 0
BLAST of Lcy07g015630 vs. TAIR 10
Match: AT5G59950.5 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 270.0 bits (689), Expect = 1.8e-72 Identity = 159/249 (63.86%), Postives = 189/249 (75.90%), Query Frame = 0
BLAST of Lcy07g015630 vs. TAIR 10
Match: AT5G59950.3 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 266.9 bits (681), Expect = 1.6e-71 Identity = 158/248 (63.71%), Postives = 188/248 (75.81%), Query Frame = 0
BLAST of Lcy07g015630 vs. TAIR 10
Match: AT5G02530.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 237.3 bits (604), Expect = 1.3e-62 Identity = 162/291 (55.67%), Postives = 182/291 (62.54%), Query Frame = 0
BLAST of Lcy07g015630 vs. TAIR 10
Match: AT5G02530.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 237.3 bits (604), Expect = 1.3e-62 Identity = 160/289 (55.36%), Postives = 180/289 (62.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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