Lcy07g015150 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g015150
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Mitochondrial 28S Ribosomal protein
Location	Chr07: 44132429 .. 44134608 (+)
RNA-Seq Expression	Lcy07g015150
Synteny	Lcy07g015150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCGAAAATTCCCCATTTTCACACGGCAAAGTGTAGAGCAGCGAAATAGCGATACCAGAGAGAAGGGCAACCAAACCTAGAGAGACAGAGAGACGCCAATGTCTGTCGCCAACAGAGCTGCGATCAGTCGAGCCCTAGATTTCTCCAGGTTTTCTTCTAGCTTTCTCAGAAGCTTCAGCACTTCTTCGCCGTCAACCTCTTCTTCGAACCCCAATGCCTCGGCTGCTTCGAGTAAAAACAAGCGGAGGAAGAAGAAGAAGAACTTGTTCGAAGTAGTTCAGTTTTTGCCCAATTGGGGAGTAGGATACCATGTCGCCAAGGCTCACTGGGATGAAATATCATATCAGATCACCAAAATCAATCTGTACAAGGTTTGTCTCCATCTGGTTTTGTTTCTTAGACTTGGATGGTGGTTCGTTTGAGATTCTTCTCCCTCTATAATCTGCAGAAAATTTGGAAATAAATGATATGCCGTTTCTGCTGGTGGTTACCATTTCTCGTCTGCATTCGTGTGAATAAACTGATTGAGAGGATTTAAAGGTTTTGTTTCGGGTAAAAACTCAGTGGGATTTCGTAATTTCTCTAATCGTATACGAAGATTTATAGAATTTTAGACTTTGGAGACGTTTGACATTTTTCCTATGACTATTGATGATCAAACAGGAAGTTTCACATTCTGTTTACTTTCGGGACATTAGGATTCAGGATTTAAGCTTTTCTCTTGATTTTCTTTACAGAGTGGCACGCACGGAAAGGCATGGGGCATCGCTCATAAAGATGGTTAGTGATTCTATATCACGAAATCTAGTTCCTTAATCGTTGTTGGACTTTCATTTTAGTTTTTATCATGTTGCTGGAATTTTGTTCGAATATCTATTTAGAAGAATGGGAATTCAGACATACTTGAAACTCTTGTATCATGATCTTTTTACTTGGGCTAAATTCTATGACATCAAGAGTTAATGCTTTATAGTTGATTTAGATGCGTGATTAGGGAAGATGAAAGTTAGAATATTATTGTACCATTTACTTCGTACCTGGTATATAGGATTATGTGTCATGACAATGTACTTCGTACCTGATATATAGGATTATGTGTCATGATAATTTAGATTCACCCGATAACCATTTGGTTTTTTGAAAATTAAGCTTATAAACATTACTTCTACCTATGAATTTCTTTGTTTTGAATGTTTTCCAAATCCAAGCCAAGTTTGAAAACTAAAAAAAAGTAGTTTTTAAAAACTTGTTTTTGGTTTTGGATTTCGACTAAGAATTCAAATGTTTTTTAAGAAAAATGAAAATCATTGTAAAGAAACTGGGAGAAAACAAATACAATTTTCAAAAACCAAATCGTTATCCAATGGAGCCTTAGTTACTTTGTTCTATTACAAGTAGTCTGCAAGTATTCAGGATTTATGGCATGAGCTCCCAGCAACTTAAGCTGGAGGTAGGTTGAGTAAATTAGCCCTTTAGATTGTTTCCTTTTGAAGTCTCTACTGAGGCGACTCCGGACTTGCTAATCAATATAACCTACCATTTTTGTGTTGCTTACAAATGAATGTTAAAATTTGAGTTTGTATAGACTTGTGTTTCTGTATGTTATTGTTGCTTTTTGCAAACTACTTTCATCAAAGACAGGTTGAATAACGTTACAAAAATTTGTTTCAGGCACTCCCATTGCAGAAGCTCCAAAGAAAATCAGCGGAGTTCACAAGCGCTGTTGGAAGTATATTGCAAGTTTGCCAAAATCATCAGAGCACAACGAGGACGAAATTGATAGAAAGCAACCCATCAGCTGAAGTTCATAGTTCATGGCTGCAGAGAAATTTTAGTTGCTGATTCTTTTTGGCCAACCTTATTTTCTGGTTCACAGACAGTTTCAGTCTCTCCAGATTAGCAGTCTTTAAAAATGTAGTTGGGTTTCTTATCTCCATTAGTTGAGGGGAATTCTGTGCTTAACTTGTTACCGAGATAAAAGAAAGATCAATCATCCGAACTAAGTGTAAGTTGAATCTGTTTTTTGAGTTTATTTTCTCAGTTATTAGTGGATTTCTATGTTTAATAGAGGTTGAAGAATCTAGTTGATCTTGTGGATCCGTGTTCAGTCATGCTGTGAAAAAATGTTATTTTTTCTTTATTTGAAAAACATGGAAGTTATTAGAACTTTATGTGGG

mRNA sequence

ATGCGCGAAAATTCCCCATTTTCACACGGCAAAGTGTAGAGCAGCGAAATAGCGATACCAGAGAGAAGGGCAACCAAACCTAGAGAGACAGAGAGACGCCAATGTCTGTCGCCAACAGAGCTGCGATCAGTCGAGCCCTAGATTTCTCCAGGTTTTCTTCTAGCTTTCTCAGAAGCTTCAGCACTTCTTCGCCGTCAACCTCTTCTTCGAACCCCAATGCCTCGGCTGCTTCGAGTAAAAACAAGCGGAGGAAGAAGAAGAAGAACTTGTTCGAAGTAGTTCAGTTTTTGCCCAATTGGGGAGTAGGATACCATGTCGCCAAGGCTCACTGGGATGAAATATCATATCAGATCACCAAAATCAATCTGTACAAGAGTGGCACGCACGGAAAGGCATGGGGCATCGCTCATAAAGATGGCACTCCCATTGCAGAAGCTCCAAAGAAAATCAGCGGAGTTCACAAGCGCTGTTGGAAGTATATTGCAAGTTTGCCAAAATCATCAGAGCACAACGAGGACGAAATTGATAGAAAGCAACCCATCAGCTGAAGTTCATAGTTCATGGCTGCAGAGAAATTTTAGTTGCTGATTCTTTTTGGCCAACCTTATTTTCTGGTTCACAGACAGTTTCAGTCTCTCCAGATTAGCAGTCTTTAAAAATGTAGTTGGGTTTCTTATCTCCATTAGTTGAGGGGAATTCTGTGCTTAACTTGTTACCGAGATAAAAGAAAGATCAATCATCCGAACTAAGTGTAAGTTGAATCTGTTTTTTGAGTTTATTTTCTCAGTTATTAGTGGATTTCTATGTTTAATAGAGGTTGAAGAATCTAGTTGATCTTGTGGATCCGTGTTCAGTCATGCTGTGAAAAAATGTTATTTTTTCTTTATTTGAAAAACATGGAAGTTATTAGAACTTTATGTGGG

Coding sequence (CDS)

ATGTCTGTCGCCAACAGAGCTGCGATCAGTCGAGCCCTAGATTTCTCCAGGTTTTCTTCTAGCTTTCTCAGAAGCTTCAGCACTTCTTCGCCGTCAACCTCTTCTTCGAACCCCAATGCCTCGGCTGCTTCGAGTAAAAACAAGCGGAGGAAGAAGAAGAAGAACTTGTTCGAAGTAGTTCAGTTTTTGCCCAATTGGGGAGTAGGATACCATGTCGCCAAGGCTCACTGGGATGAAATATCATATCAGATCACCAAAATCAATCTGTACAAGAGTGGCACGCACGGAAAGGCATGGGGCATCGCTCATAAAGATGGCACTCCCATTGCAGAAGCTCCAAAGAAAATCAGCGGAGTTCACAAGCGCTGTTGGAAGTATATTGCAAGTTTGCCAAAATCATCAGAGCACAACGAGGACGAAATTGATAGAAAGCAACCCATCAGCTGA

Protein sequence

MSVANRAAISRALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFEVVQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSEHNEDEIDRKQPIS

Homology

[Close]

BLAST of Lcy07g015150 vs. ExPASy TrEMBL
Match: A0A0A0KH76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188090 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60
Identity = 120/135 (88.89%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MSVANRAAISRALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFEVV 60
           M+VANR AISRALDFSR SSSF+R+FS+SSPSTSSSNPNAS  SS+ KRRKKKKNLFEVV
Sbjct: 1   MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVV 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+GTPI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGTPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSE 136
           KRCWKYIASLP S E
Sbjct: 121 KRCWKYIASLPHSGE 135

[Close]

BLAST of Lcy07g015150 vs. ExPASy TrEMBL
Match: A0A5A7V0Y6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00360 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.2e-59
Identity = 116/135 (85.93%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MSVANRAAISRALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFEVV 60
           M+VANR AISRALDFSR SSSF+R+F++SSPSTSSSNPNAS +SS+ KRRKKKKNLFEV+
Sbjct: 1   MAVANRTAISRALDFSRLSSSFIRTFTSSSPSTSSSNPNASPSSSQTKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+G PI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGMPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSE 136
           KRCWKYIASLP+  E
Sbjct: 121 KRCWKYIASLPRLGE 135

[Close]

BLAST of Lcy07g015150 vs. ExPASy TrEMBL
Match: A0A1S3CKN2 (uncharacterized protein LOC103502049 OS=Cucumis melo OX=3656 GN=LOC103502049 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.2e-59
Identity = 116/135 (85.93%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MSVANRAAISRALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFEVV 60
           M+VANR AISRALDFSR SSSF+R+F++SSPSTSSSNPNAS +SS+ KRRKKKKNLFEV+
Sbjct: 1   MAVANRTAISRALDFSRLSSSFIRTFTSSSPSTSSSNPNASPSSSQTKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+G PI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGMPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSE 136
           KRCWKYIASLP+  E
Sbjct: 121 KRCWKYIASLPRLGE 135

[Close]

BLAST of Lcy07g015150 vs. ExPASy TrEMBL
Match: A0A6J1KZ28 (uncharacterized protein LOC111500023 OS=Cucurbita maxima OX=3661 GN=LOC111500023 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 116/136 (85.29%), Postives = 129/136 (94.85%), Query Frame = 0


Query: 1   MSVANRAAISRALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFEVV 60
           M+VANR  ISRALDFSR +SSF+R+FSTS+ STSSS+P+ASAA+SKNKRRKKKKNLFEV+
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAKAHWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSEH 137
           KRCWKYI SL +SSE+
Sbjct: 121 KRCWKYIPSLSRSSEN 136

[Close]

BLAST of Lcy07g015150 vs. ExPASy TrEMBL
Match: A0A6J1G714 (uncharacterized protein LOC111451448 OS=Cucurbita moschata OX=3662 GN=LOC111451448 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.1e-58
Identity = 115/136 (84.56%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 1   MSVANRAAISRALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFEVV 60
           M+VANR  ISRALDFSR +SSF+R+FSTS+ STSSS+P+ASAA+SKNKRRKKKKNLFEV+
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKGHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSEH 137
           KRCWKYI SLP+S E+
Sbjct: 121 KRCWKYIPSLPRSLEN 136

[Close]

BLAST of Lcy07g015150 vs. NCBI nr
Match: XP_038900676.1 (uncharacterized protein LOC120087826 [Benincasa hispida])

HSP 1 Score: 251.5 bits (641), Expect = 4.4e-63
Identity = 124/135 (91.85%), Postives = 130/135 (96.30%), Query Frame = 0


Query: 3   VANRAAISRALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFEVVQF 62
           VANR AISRALDFSR SS+F+R+FSTSSPSTSSSNPNAS AS+KNKRRKKKKNLFEVVQF
Sbjct: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63

Query: 63  LPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 122
           LPNWGVGYHVAKAHWDEISYQITKINLYK+GTHGKAWGIAHKDGTPIAEAPKKISGVHKR
Sbjct: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123

Query: 123 CWKYIASLPKSSEHN 138
           CWKYIASLP+S E N
Sbjct: 124 CWKYIASLPRSGESN 138

[Close]

BLAST of Lcy07g015150 vs. NCBI nr
Match: XP_004143137.1 (uncharacterized protein LOC101207989 [Cucumis sativus] >KGN47116.1 hypothetical protein Csa_020646 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 3.5e-60
Identity = 120/135 (88.89%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MSVANRAAISRALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFEVV 60
           M+VANR AISRALDFSR SSSF+R+FS+SSPSTSSSNPNAS  SS+ KRRKKKKNLFEVV
Sbjct: 1   MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVV 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+GTPI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGTPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSE 136
           KRCWKYIASLP S E
Sbjct: 121 KRCWKYIASLPHSGE 135

[Close]

BLAST of Lcy07g015150 vs. NCBI nr
Match: XP_008464074.1 (PREDICTED: uncharacterized protein LOC103502049 [Cucumis melo] >KAA0061862.1 uncharacterized protein E6C27_scaffold89G001010 [Cucumis melo var. makuwa] >TYK15394.1 uncharacterized protein E5676_scaffold571G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 6.6e-59
Identity = 116/135 (85.93%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MSVANRAAISRALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFEVV 60
           M+VANR AISRALDFSR SSSF+R+F++SSPSTSSSNPNAS +SS+ KRRKKKKNLFEV+
Sbjct: 1   MAVANRTAISRALDFSRLSSSFIRTFTSSSPSTSSSNPNASPSSSQTKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+G PI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGMPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSE 136
           KRCWKYIASLP+  E
Sbjct: 121 KRCWKYIASLPRLGE 135

[Close]

BLAST of Lcy07g015150 vs. NCBI nr
Match: XP_023532313.1 (uncharacterized protein LOC111794505 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 8.6e-59
Identity = 116/136 (85.29%), Postives = 129/136 (94.85%), Query Frame = 0


Query: 1   MSVANRAAISRALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFEVV 60
           M+VANR  ISRALDFSR +SSF+R+FSTS+ STSSS+P+ASAA+SKNKRRKKKKNLFEV+
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKGHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSEH 137
           KRCWKYI SLP+SSE+
Sbjct: 121 KRCWKYIPSLPRSSEN 136

[Close]

BLAST of Lcy07g015150 vs. NCBI nr
Match: XP_023007567.1 (uncharacterized protein LOC111500023 [Cucurbita maxima])

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 116/136 (85.29%), Postives = 129/136 (94.85%), Query Frame = 0


Query: 1   MSVANRAAISRALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFEVV 60
           M+VANR  ISRALDFSR +SSF+R+FSTS+ STSSS+P+ASAA+SKNKRRKKKKNLFEV+
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAKAHWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSEH 137
           KRCWKYI SL +SSE+
Sbjct: 121 KRCWKYIPSLSRSSEN 136

[Close]

BLAST of Lcy07g015150 vs. TAIR 10
Match: AT5G58990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-39
Identity = 86/137 (62.77%), Postives = 105/137 (76.64%), Query Frame = 0


Query: 1   MSVANRAAISRALDFSRF--SSSFLRSFSTSSPSTSSSNPNASAASSKNK-RRKKKKNLF 60
           M++ NR AISR      F  S S LR+FS ++PS +S+  + + +S  NK +R+KKKNL 
Sbjct: 3   MTLMNR-AISRTETVGAFSLSLSLLRNFS-AAPSAASTPASENPSSDSNKPKRRKKKNLI 62

Query: 61  EVVQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKIS 120
           EV QFLPNWG+GYH+AKAHW+ ISY+ITKINLYK G HGKAWGI HKDG   AEAPKKIS
Sbjct: 63  EVAQFLPNWGIGYHMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKIS 122

Query: 121 GVHKRCWKYIASLPKSS 135
           GVHKRCWKYI +L K++
Sbjct: 123 GVHKRCWKYIPNLSKTT 137

[Close]

BLAST of Lcy07g015150 vs. TAIR 10
Match: AT5G52370.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 157.9 bits (398), Expect = 6.2e-39
Identity = 87/136 (63.97%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 1   MSVANRAAISR--ALDFSRFSSSFLRSFSTSSPSTSSSNPNASAASSKNKRRKKKKNLFE 60
           M++ NR AISR   +   R S + LR+FS +  S      N S+ SSK KRR KKKNL E
Sbjct: 3   MTLINR-AISRTETVGAFRLSLNLLRNFSAAPAS-----ENPSSDSSKPKRR-KKKNLIE 62

Query: 61  VVQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISG 120
           V QFLPNWG+GYH+AKAHW+ ISY+ITKINLYK G HGKAWGI HKDG   AEAPKKISG
Sbjct: 63  VAQFLPNWGIGYHMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKISG 122

Query: 121 VHKRCWKYIASLPKSS 135
           VHKRCWKYI +L K++
Sbjct: 123 VHKRCWKYIPNLSKTA 131

The following BLAST results are available for this feature:

BLAST of Lcy07g015150 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g015150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH76	1.7e-60	88.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188090 PE=4 SV=1	[more]
A0A5A7V0Y6	3.2e-59	85.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CKN2	3.2e-59	85.93	uncharacterized protein LOC103502049 OS=Cucumis melo OX=3656 GN=LOC103502049 PE=...	[more]
A0A6J1KZ28	1.2e-58	85.29	uncharacterized protein LOC111500023 OS=Cucurbita maxima OX=3661 GN=LOC111500023...	[more]
A0A6J1G714	2.1e-58	84.56	uncharacterized protein LOC111451448 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]

BLAST of Lcy07g015150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900676.1	4.4e-63	91.85	uncharacterized protein LOC120087826 [Benincasa hispida]	[more]
XP_004143137.1	3.5e-60	88.89	uncharacterized protein LOC101207989 [Cucumis sativus] >KGN47116.1 hypothetical ...	[more]
XP_008464074.1	6.6e-59	85.93	PREDICTED: uncharacterized protein LOC103502049 [Cucumis melo] >KAA0061862.1 unc...	[more]
XP_023532313.1	8.6e-59	85.29	uncharacterized protein LOC111794505 [Cucurbita pepo subsp. pepo]	[more]
XP_023007567.1	2.5e-58	85.29	uncharacterized protein LOC111500023 [Cucurbita maxima]	[more]

BLAST of Lcy07g015150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58990.1	1.6e-39	62.77	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G52370.1	6.2e-39	63.97	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032053	Mitochondrial 28S ribosomal protein S34	PFAM	PF16053	MRP-S34	coord: 54..137 e-value: 1.2E-11 score: 44.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..44
None	No IPR available	PANTHER	PTHR35316	28S RIBOSOMAL S34 PROTEIN	coord: 4..139
None	No IPR available	PANTHER	PTHR35316:SF1	28S RIBOSOMAL S34 PROTEIN	coord: 4..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g015150.1	Lcy07g015150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0008270	zinc ion binding