Lcy07g013800 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g013800
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUbiquitin, putative
LocationChr07: 42941172 .. 42944365 (+)
RNA-Seq ExpressionLcy07g013800
SyntenyLcy07g013800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTAGCCCAAATTTTTCTCGAGACTTTGTATTCTCCCTTCGTTATCTCTGTCGATTTTTCATTCGCTCTGTTACTGAGGAAGAAAAGCGATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAGGTCGAGAGCAGCGATACCATCGATAATGTCAAAGCCAAGATCCAGGTTTTTATTCTCTGATTTCCTTCTCTCACTTCCTTTTTCTATCAATTCATTTCTGCCGCAGGTTCTTGAGCTTTTAATTGATGCAAACGAGATTTCTGGCTTCGGTTTCTTTCCTCGAATTTCGGTTCTGCTTTGCCAGCGCTTATTGTTTGTGGCCTCTGATTGATGTTTAGTCTGATTATTTGTTTAATCGCCGGGTAATATCTTTGTTTTGCGACTTGGAGATTCCTTCGCCGTTCGGAAGTTTCTTTGTGCTGAATCGATTTCAGTTATTTGTTCTTTTGTTTATTCTCTTTATGATGTTATGGAAAATCTAGTTTCTTTCTTTTTTTTTTTTTTGGTCAATTCTCACTAACATGCGTTTGTTTCGATTTTGGTGTCATTACATGAACCAGTAGAAAGAAAATTAAGAAATTAAGGTTTTTAATTTCCGATTTGCTACGTTTATTGGTCAAATTAAGTTGAAGAGTAGGTTTTCTTTATTCTTTTTAAAATCATACACTGGGACATATTGGCTTTATATGTAAACCATGCAATATTTATTTATGCTGATTCTTTTTGCGTGTTTACCATATTAGCTTCTTCCATGGAGTGATTTTGTTTTCTCATGTATGTTTATATTCTTGCTATATCGCTTTCTCAACAAATTAAAAAAAAAAAAAATCTTCAAGCTGTTATGGCCCCTACAAATTGATGTGGCAATTTGATTCCAGCGTGCCTTTTTTTTTTTTTTTTTTTTAATCATATTTTGAATTCTGGATTGCACATTCTTTCTAGTTTTAACATGGGCGATTAGGCAATTTTGGTTTTATTGGGTTGTTGTTATGTGTAGGACAAGGAAGGTATTCCTCCAGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACACTTGCAGATTATAACATCCAAAAGGAGTCAACCCTTCACCTGGTCTTGAGGCTGAGGGGAGGTACTATGATTAAGGTCAAGACTCTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATCAAGGAGCGAGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAAAGGTCTGCATTTACCTTCTCCAATTTCTTTCAACTACAATGACTATGTCTTTCTATAGGCATTTGTATGTGTGGATAACTTGTTTAATCTCCCTCAAATACATCAGTATGCCCTCTCTGTTTAAGAATAGAATTTGGTGTGGAGCCTTCCTACTTAGCACAAGGTTCATTAGTTCCTCTTGGAAAGAAACAATATAGTTGGAGGATGTTAGATTCCAACATTTATTTCATACTTGAAGTTTAATTTTTAAAATGTCGTGACATAACACAACTCAAACAATTTAAGAACATGTCTATTGCTAATTTGAGCAGAGTTCAATTGATTAGATATCTAATTACCCTTTCCTAAGGATGAAGGATCGATCACCACCGCCATATTTTTTTAGCCCAGAAAATAAAAGAAAGGACATGTCTTTTAAGTATTTTATATGTAAGTAGTATTTTGACATGTTTCAGGTATTTGAAGTTTTATTCTGAACAGTGAGATTTGCATTTAGAATACAATATAAACGAAGATGTAAGATTTACATTACTCAGAAATGTAATGTCTTATGATGAAGGTTTATAAAAGAAACCGAAGAGCAATAAACATATTTACTAATTACTTCAAAGTCACTTAAGAATGGGAATTCAAATAAAAACTTTCATATAAAATAGTATTGTCCAATGAAGCTGTTGATTCAGCATCGTGATATAGATTGATAGGAAGAGTCCTGTTAGTTTCACATACTTAGAAAACTAACTCCATGGTTCACGTTCAAGTATCTGAATTTAAAATATAAATACATAATTTCAGAAGGTCTAATGCAGAAATGCTCTAGTGCCTGACGATTGATAATTTGATAGACTCAGGGTTTAGGGTTTAGGGTGCCACGTTACTTAAGTTTAAGTCTCCATGATTTCTCTAGGTTTTCTCTAGTTAGCCACTCATGCTCTTTCTTCTAATATCTATTTTATGCTATTATTTTCTGGAGTGGCATTAAATATCACACCGACATAATGAGAATTACTGGGTCAACAATTCTGAATTGCATTGAAATTCTTTCTTCTATTTCTTATGGTCATCTATGAACTTTTAAAGGAGATCCATTACTGACCAAATGGGTTAACTAGCACTTGAAATTTGAAAATGCACTCTGGTTATGTTAGATAGTAAGCACTGTCCTACTCTGCTTTTTGTAGGCTTATATATGCCGGCAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTCGCCCTGAGGGGCGGTTGCCTGTAAAAGCATTTATCACCTTCTGAAATTCTGAATTTTCAGTTTTATTTTGTTGGTGCTTGATGAATGCATGAGCGGCATCTTGCTTGTGTGGATAAATGGAAAATATTTGAGCCCAAACTTACTTTATCAAATACTCTGTAATAGAGATTTCGCCTGTGTATCTCCACATCTTTTCAAGTTCAACATTAAACCATTTGGTCTGCGTGGAAGAAGTTTGTAAAATTTAGTCCTAAAGTTTATCAATTTTTATTGGGGAATGGAGCTTAATTATCCTTATGGTTCTACTTCATTCTCATGGATCCTCTTCTGTCTAGGGCCGTATCACAGGCACAAGTGTTCGACATCCTTAATTCAGGTGCGTTTCATACTCTTTCTTTCCTCTTATTATAATGCGTTAATATGGCACGTGTTTGTTAACTTCTTAGTGCAACAACTGCGCACGTGGGAGATTAAACTATCCACTTTAGAGATGGGAATAAGTGTCTTATTTACTAAACTATGCTTTGTGGATTATAGGTAGAGTGTGTTGGCTTTAATTTGAAGTTCCACTATGCATAAGTCTATACATGATTGAAAATGTTTTAGTGACCAATATTCTTATAAAGAAATTTGATATTGTTGTTTATATTA

mRNA sequence

CTTTTAGCCCAAATTTTTCTCGAGACTTTGTATTCTCCCTTCGTTATCTCTGTCGATTTTTCATTCGCTCTGTTACTGAGGAAGAAAAGCGATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAGGTCGAGAGCAGCGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACACTTGCAGATTATAACATCCAAAAGGAGTCAACCCTTCACCTGGTCTTGAGGCTGAGGGGAGGTACTATGATTAAGGTCAAGACTCTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATCAAGGAGCGAGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAAAGGCTTATATATGCCGGCAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTCGCCCTGAGGGGCGGTTGCCTGTAAAAGCATTTATCACCTTCTGAAATTCTGAATTTTCAGTTTTATTTTGTTGGTGCTTGATGAATGCATGAGCGGCATCTTGCTTGTGTGGATAAATGGAAAATATTTGAGCCCAAACTTACTTTATCAAATACTCTGTAATAGAGATTTCGCCTGTGTATCTCCACATCTTTTCAAGTTCAACATTAAACCATTTGGTCTGCGTGGAAGAAGTTTGTAAAATTTAGTCCTAAAGTTTATCAATTTTTATTGGGGAATGGAGCTTAATTATCCTTATGGTTCTACTTCATTCTCATGGATCCTCTTCTGTCTAGGGCCGTATCACAGGCACAAGTGTTCGACATCCTTAATTCAGGTGCGTTTCATACTCTTTCTTTCCTCTTATTATAATGCGTTAATATGGCACGTGTTTGTTAACTTCTTAGTGCAACAACTGCGCACGTGGGAGATTAAACTATCCACTTTAGAGATGGGAATAAGTGTCTTATTTACTAAACTATGCTTTGTGGATTATAGGTAGAGTGTGTTGGCTTTAATTTGAAGTTCCACTATGCATAAGTCTATACATGATTGAAAATGTTTTAGTGACCAATATTCTTATAAAGAAATTTGATATTGTTGTTTATATTA

Coding sequence (CDS)

ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAGGTCGAGAGCAGCGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCAGACCAGCAGAGATTAATTTTTGCTGGTAAGCAATTGGAAGATGGTCGAACACTTGCAGATTATAACATCCAAAAGGAGTCAACCCTTCACCTGGTCTTGAGGCTGAGGGGAGGTACTATGATTAAGGTCAAGACTCTGACCGGGAAGGAAATTGAGATTGACATTGAGCCAACTGACACAATTGATCGTATCAAGGAGCGAGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAAAGGCTTATATATGCCGGCAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTCGCCCTGAGGGGCGGTTGCCTGTAA

Protein sequence

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGCL
Homology
[Close]
BLAST of Lcy07g013800 vs. ExPASy Swiss-Prot
Match: Q9SHE7 (Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 SV=3)

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-78
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152

[Close]
BLAST of Lcy07g013800 vs. ExPASy Swiss-Prot
Match: P0C030 (Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB1 PE=2 SV=2)

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-78
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152

[Close]
BLAST of Lcy07g013800 vs. ExPASy Swiss-Prot
Match: P0C031 (Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB2 PE=2 SV=2)

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-78
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152

[Close]
BLAST of Lcy07g013800 vs. ExPASy Swiss-Prot
Match: P0C073 (Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica OX=159298 GN=RUB1 PE=2 SV=2)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-78
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDR+KERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152

[Close]
BLAST of Lcy07g013800 vs. ExPASy Swiss-Prot
Match: Q8RUC6 (Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana OX=3702 GN=RUB2 PE=1 SV=3)

HSP 1 Score: 292.0 bits (746), Expect = 4.0e-78
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGCL 155
           YAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154

[Close]
BLAST of Lcy07g013800 vs. ExPASy TrEMBL
Match: A0A5B6ZI75 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_013076 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 5.5e-78
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGCL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGC+
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGCV 154

[Close]
BLAST of Lcy07g013800 vs. ExPASy TrEMBL
Match: A0A4U5R4G4 (Putative ubiquitin OS=Populus alba OX=43335 GN=D5086_0000004210 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 5.5e-78
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGCL 155
           YAGKQLGDDKTA+DYNIEGGSVLHLVLALRGGCL
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLALRGGCL 154

[Close]
BLAST of Lcy07g013800 vs. ExPASy TrEMBL
Match: A0A6I9TBY1 (ubiquitin-NEDD8-like protein RUB2 OS=Sesamum indicum OX=4182 GN=LOC105164897 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.2e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGCL 155
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGCL
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGCL 154

[Close]
BLAST of Lcy07g013800 vs. ExPASy TrEMBL
Match: B9RI09 (Ubiquitin, putative OS=Ricinus communis OX=3988 GN=RCOM_1574840 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGC 154
           YAGKQLGDDKTA+DYNIEGGSVLHLVLALRGGC
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLALRGGC 153

[Close]
BLAST of Lcy07g013800 vs. ExPASy TrEMBL
Match: A0A067JQG5 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22623 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGC 154
           YAGKQLGDDKTA+DYNIEGGSVLHLVLALRGGC
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLALRGGC 153

[Close]
BLAST of Lcy07g013800 vs. NCBI nr
Match: XP_034905355.1 (ubiquitin-NEDD8-like protein RUB2 [Populus alba] >XP_034905417.1 ubiquitin-NEDD8-like protein RUB2 [Populus alba] >TKS18752.1 putative ubiquitin [Populus alba])

HSP 1 Score: 300.1 bits (767), Expect = 1.1e-77
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGCL 155
           YAGKQLGDDKTA+DYNIEGGSVLHLVLALRGGCL
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLALRGGCL 154

[Close]
BLAST of Lcy07g013800 vs. NCBI nr
Match: XP_011082017.1 (ubiquitin-NEDD8-like protein RUB2 [Sesamum indicum])

HSP 1 Score: 298.9 bits (764), Expect = 2.5e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGCL 155
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGCL
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGCL 154

[Close]
BLAST of Lcy07g013800 vs. NCBI nr
Match: XP_012087376.1 (ubiquitin-NEDD8-like protein RUB2 [Jatropha curcas] >KDP25088.1 hypothetical protein JCGZ_22623 [Jatropha curcas])

HSP 1 Score: 298.5 bits (763), Expect = 3.3e-77
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGC 154
           YAGKQLGDDKTA+DYNIEGGSVLHLVLALRGGC
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLALRGGC 153

[Close]
BLAST of Lcy07g013800 vs. NCBI nr
Match: XP_002513378.1 (ubiquitin-NEDD8-like protein RUB2 [Ricinus communis] >EEF48781.1 ubiquitin, putative [Ricinus communis])

HSP 1 Score: 298.5 bits (763), Expect = 3.3e-77
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGC 154
           YAGKQLGDDKTA+DYNIEGGSVLHLVLALRGGC
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLALRGGC 153

[Close]
BLAST of Lcy07g013800 vs. NCBI nr
Match: XP_002302153.1 (ubiquitin-NEDD8-like protein RUB2 [Populus trichocarpa] >XP_034931237.1 ubiquitin-NEDD8-like protein RUB2 [Populus alba] >KAG6776249.1 hypothetical protein POTOM_019755 [Populus tomentosa] >ABK94447.1 unknown [Populus trichocarpa] >PNT48140.1 hypothetical protein POPTR_002G062500 [Populus trichocarpa] >TKS03614.1 hypothetical protein D5086_0000156110 [Populus alba])

HSP 1 Score: 298.1 bits (762), Expect = 4.3e-77
Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGCL 155
           YAGKQLGDDKTA+DYNIEGGSVLHLVLALRGGCL
Sbjct: 121 YAGKQLGDDKTARDYNIEGGSVLHLVLALRGGCL 154

[Close]
BLAST of Lcy07g013800 vs. TAIR 10
Match: AT1G31340.1 (related to ubiquitin 1 )

HSP 1 Score: 293.9 bits (751), Expect = 7.5e-80
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152

[Close]
BLAST of Lcy07g013800 vs. TAIR 10
Match: AT2G35635.1 (ubiquitin 7 )

HSP 1 Score: 292.0 bits (746), Expect = 2.9e-79
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGCL 155
           YAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154

[Close]
BLAST of Lcy07g013800 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 )

HSP 1 Score: 242.3 bits (617), Expect = 2.6e-64
Identity = 123/152 (80.92%), Postives = 135/152 (88.82%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           +AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152

[Close]
BLAST of Lcy07g013800 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein )

HSP 1 Score: 242.3 bits (617), Expect = 2.6e-64
Identity = 123/152 (80.92%), Postives = 135/152 (88.82%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           +AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152

[Close]
BLAST of Lcy07g013800 vs. TAIR 10
Match: AT4G05050.1 (ubiquitin 11 )

HSP 1 Score: 242.3 bits (617), Expect = 2.6e-64
Identity = 123/152 (80.92%), Postives = 135/152 (88.82%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           +AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152

The following BLAST results are available for this feature:
BLAST of Lcy07g013800 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SHE71.1e-7899.34Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 S... [more]
P0C0301.1e-7899.34Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RU... [more]
P0C0311.1e-7899.34Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RU... [more]
P0C0731.4e-7898.68Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica OX=159298 GN=RUB1 PE... [more]
Q8RUC64.0e-7898.05Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana OX=3702 GN=RUB2 PE=1 S... [more]
BLAST of Lcy07g013800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5B6ZI755.5e-7899.35Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_013076 PE=4 SV=1[more]
A0A4U5R4G45.5e-7899.35Putative ubiquitin OS=Populus alba OX=43335 GN=D5086_0000004210 PE=4 SV=1[more]
A0A6I9TBY11.2e-7799.35ubiquitin-NEDD8-like protein RUB2 OS=Sesamum indicum OX=4182 GN=LOC105164897 PE=... [more]
B9RI091.6e-7799.35Ubiquitin, putative OS=Ricinus communis OX=3988 GN=RCOM_1574840 PE=4 SV=1[more]
A0A067JQG51.6e-7799.35Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22623 PE=4 SV=1[more]
BLAST of Lcy07g013800 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_034905355.11.1e-7799.35ubiquitin-NEDD8-like protein RUB2 [Populus alba] >XP_034905417.1 ubiquitin-NEDD8... [more]
XP_011082017.12.5e-7799.35ubiquitin-NEDD8-like protein RUB2 [Sesamum indicum][more]
XP_012087376.13.3e-7799.35ubiquitin-NEDD8-like protein RUB2 [Jatropha curcas] >KDP25088.1 hypothetical pro... [more]
XP_002513378.13.3e-7799.35ubiquitin-NEDD8-like protein RUB2 [Ricinus communis] >EEF48781.1 ubiquitin, puta... [more]
XP_002302153.14.3e-7798.70ubiquitin-NEDD8-like protein RUB2 [Populus trichocarpa] >XP_034931237.1 ubiquiti... [more]
BLAST of Lcy07g013800 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G31340.17.5e-8099.34related to ubiquitin 1 [more]
AT2G35635.12.9e-7998.05ubiquitin 7 [more]
AT4G05320.22.6e-6480.92polyubiquitin 10 [more]
AT4G02890.12.6e-6480.92Ubiquitin family protein [more]
AT4G05050.12.6e-6480.92ubiquitin 11 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956Ubiquitin domainPRINTSPR00348UBIQUITINcoord: 53..74
score: 91.18
coord: 11..31
score: 85.2
coord: 32..52
score: 95.05
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 1..72
e-value: 3.0E-35
score: 133.1
coord: 77..148
e-value: 1.2E-27
score: 107.9
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 3..74
e-value: 5.8E-34
score: 115.7
coord: 79..150
e-value: 6.4E-28
score: 96.3
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 1..76
score: 30.452106
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 77..152
score: 26.423656
NoneNo IPR availableGENE3D3.10.20.90coord: 78..154
e-value: 2.2E-34
score: 119.4
coord: 1..77
e-value: 8.3E-47
score: 159.4
NoneNo IPR availablePANTHERPTHR10666:SF364SUBFAMILY NOT NAMEDcoord: 1..152
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..152
NoneNo IPR availableCDDcd01803Ubl_ubiquitincoord: 1..76
e-value: 1.62706E-51
score: 156.836
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 27..52
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 103..128
IPR038738Nedd8-like ubiquitinCDDcd01806Ubl_NEDD8coord: 79..152
e-value: 9.6459E-48
score: 147.15
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 79..153
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g013800.1Lcy07g013800.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019941 modification-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005634 nucleus
molecular_function GO:0003729 mRNA binding
molecular_function GO:0031386 protein tag
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0005515 protein binding