Lcy07g013730 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g013730
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCT domain-containing protein
Location	Chr07: 42869699 .. 42871187 (-)
RNA-Seq Expression	Lcy07g013730
Synteny	Lcy07g013730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCATATTTTTTAAGCCCCAAAAGAATCCTTTCTCCTCTCTCTTTCTCTCTTTCTTTGAGATATCTTCTAATTTCTATGGCTTCTTCATTTCCTCATAATTTCCACTCTGACCAGCTTCTTCATCCCAACAATTTCTCTGATGTTCATCACACCTTATTAATGGCAGCTGGAGACACTGGAATCTGTGCTATTAGAAACAATAATAATCATCATCATCATCATCATAACATTCACTTGGCTGCTACTGGAGAAGAAACCTTCATCCCTTCCTTCGATCGGCCGACCGTCTCGCCCGACGCCCTATCGCCGCTTCTAACAATGCCGTATCCCGACCTCTACGGCCCCGTCTCCGATATGACCGTCCCGTCGTTGCCCGAGTTCAACGTGGGTTTGTATGGTATTCATAGCTTAATTGGCAGCCAGCTCCCACCAGTGGCCGGCGCATGTGACTACGGCGAGGAGCTCTTCGGCTTCGTGCCTGATTTGAAGCCCTTCCACCGCGACACATGGGTAATTTAATGAGTTTGGAAATTCAAAAGCTTAAACTGATAAGTTACACTGTCTTCTTCATTCGTATTTAATTTCTTAGCACCAGACTTTAACAAACGAGACGGTTAGTTAGGGATTCGGACACACGACTTCCTACTCTGTTGTTGAATTAAACGGGATCGAAAATTTTTGTGATGCAGGGAAGTCAAAGTAATTATGAAATGCATGGAGTGGAAGAGACAAATATGAAGGTGGCAAGCCGCTACTCAGAAGAAGAAAGGAAAGAAAGGATTATGAGATATTTGAAAAAGAGAAACCAGAGAAATTTCAACAAAACCATCAAGGTCCTAATAATTCTCCTTTCAAAAAAAAAAAAAAAATCTTCTTCTCTCTTCCTAATTTATACATAAATATATATACATATATATTCTTTTTGTAATTAAACTCTTGTTCTTCAAATCCTCATGGTTTTTTTTTGGAATTATTTTATAGTATGCATGTCGCAAAACCCTAGCAGACAGAAGAACTCGAGTACGAGGAAGATTTGCTCGCAACAACAACGAACTTTGTGACAATGAAATTCCTCTCAAAACCAGCCAATTAACCACCCCCACTCACAACCTAATTCAACAAAGAGATCAAACGGTAAAAAAAATACAAATTTTACTTCAATTATTTCCATTTTCTTCTATATGTTTTAGTTCATAAAAATAAGATCTTTCCATTTTTTTCTATGTTTTTGTTCATAAAGGCAAGAACTTTTCAGATGGGTCGGCCAATTTCCTTATCTTTTTTTTTTGGTTGATTTTTTTGGACAGAACAAGGAAGAAGAAGAAGAGAGCTGGCTGCAAGAATTGGCAGAAAGTTTGATGTATTTACCTTATGTGACAAATTACAGTGGGCTTGGTGTGTAATTTGACAAGTAAAAAAAAATTGATGATTGTCACCCTTGTACCTTAAAACTAAGTTAACTAACTGTTAAAAATGACTTTTTTTTG

mRNA sequence

TTTCATATTTTTTAAGCCCCAAAAGAATCCTTTCTCCTCTCTCTTTCTCTCTTTCTTTGAGATATCTTCTAATTTCTATGGCTTCTTCATTTCCTCATAATTTCCACTCTGACCAGCTTCTTCATCCCAACAATTTCTCTGATGTTCATCACACCTTATTAATGGCAGCTGGAGACACTGGAATCTGTGCTATTAGAAACAATAATAATCATCATCATCATCATCATAACATTCACTTGGCTGCTACTGGAGAAGAAACCTTCATCCCTTCCTTCGATCGGCCGACCGTCTCGCCCGACGCCCTATCGCCGCTTCTAACAATGCCGTATCCCGACCTCTACGGCCCCGTCTCCGATATGACCGTCCCGTCGTTGCCCGAGTTCAACGTGGGTTTGTATGGTATTCATAGCTTAATTGGCAGCCAGCTCCCACCAGTGGCCGGCGCATGTGACTACGGCGAGGAGCTCTTCGGCTTCGTGCCTGATTTGAAGCCCTTCCACCGCGACACATGGGGAAGTCAAAGTAATTATGAAATGCATGGAGTGGAAGAGACAAATATGAAGGTGGCAAGCCGCTACTCAGAAGAAGAAAGGAAAGAAAGGATTATGAGATATTTGAAAAAGAGAAACCAGAGAAATTTCAACAAAACCATCAAGTATGCATGTCGCAAAACCCTAGCAGACAGAAGAACTCGAGTACGAGGAAGATTTGCTCGCAACAACAACGAACTTTGTGACAATGAAATTCCTCTCAAAACCAGCCAATTAACCACCCCCACTCACAACCTAATTCAACAAAGAGATCAAACGAACAAGGAAGAAGAAGAAGAGAGCTGGCTGCAAGAATTGGCAGAAAGTTTGATGTATTTACCTTATGTGACAAATTACAGTGGGCTTGGTGTGTAATTTGACAAGTAAAAAAAAATTGATGATTGTCACCCTTGTACCTTAAAACTAAGTTAACTAACTGTTAAAAATGACTTTTTTTTG

Coding sequence (CDS)

ATGGCTTCTTCATTTCCTCATAATTTCCACTCTGACCAGCTTCTTCATCCCAACAATTTCTCTGATGTTCATCACACCTTATTAATGGCAGCTGGAGACACTGGAATCTGTGCTATTAGAAACAATAATAATCATCATCATCATCATCATAACATTCACTTGGCTGCTACTGGAGAAGAAACCTTCATCCCTTCCTTCGATCGGCCGACCGTCTCGCCCGACGCCCTATCGCCGCTTCTAACAATGCCGTATCCCGACCTCTACGGCCCCGTCTCCGATATGACCGTCCCGTCGTTGCCCGAGTTCAACGTGGGTTTGTATGGTATTCATAGCTTAATTGGCAGCCAGCTCCCACCAGTGGCCGGCGCATGTGACTACGGCGAGGAGCTCTTCGGCTTCGTGCCTGATTTGAAGCCCTTCCACCGCGACACATGGGGAAGTCAAAGTAATTATGAAATGCATGGAGTGGAAGAGACAAATATGAAGGTGGCAAGCCGCTACTCAGAAGAAGAAAGGAAAGAAAGGATTATGAGATATTTGAAAAAGAGAAACCAGAGAAATTTCAACAAAACCATCAAGTATGCATGTCGCAAAACCCTAGCAGACAGAAGAACTCGAGTACGAGGAAGATTTGCTCGCAACAACAACGAACTTTGTGACAATGAAATTCCTCTCAAAACCAGCCAATTAACCACCCCCACTCACAACCTAATTCAACAAAGAGATCAAACGAACAAGGAAGAAGAAGAAGAGAGCTGGCTGCAAGAATTGGCAGAAAGTTTGATGTATTTACCTTATGTGACAAATTACAGTGGGCTTGGTGTGTAA

Protein sequence

MASSFPHNFHSDQLLHPNNFSDVHHTLLMAAGDTGICAIRNNNNHHHHHHNIHLAATGEETFIPSFDRPTVSPDALSPLLTMPYPDLYGPVSDMTVPSLPEFNVGLYGIHSLIGSQLPPVAGACDYGEELFGFVPDLKPFHRDTWGSQSNYEMHGVEETNMKVASRYSEEERKERIMRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNEIPLKTSQLTTPTHNLIQQRDQTNKEEEEESWLQELAESLMYLPYVTNYSGLGV

Homology

[Close]

BLAST of Lcy07g013730 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 4.8e-05
Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 171 ERKERIMRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNEI 224
           ER+ R+MRY +KR  R F KTI+YA RK  A+ R R++GRFA+  +    N++
Sbjct: 294 EREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDV 346

[Close]

BLAST of Lcy07g013730 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.4e-04
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 157 EETNMKV-ASRYSEEERKERIMRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNN 216
           E TN +  A + S  ER+ R++RY +KR  R F KTI+YA RK  A+ R R++GRFA+  
Sbjct: 213 EMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 272

[Close]

BLAST of Lcy07g013730 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.1e-04
Identity = 23/53 (43.40%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 164 ASRYSEEERKERIMRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNN 217
           A   S  +R+ R++RY +K+  R F KTI+YA RK  A++R R++GRFA+  +
Sbjct: 278 AQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKD 330

[Close]

BLAST of Lcy07g013730 vs. ExPASy Swiss-Prot
Match: Q96502 (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-04
Identity = 26/77 (33.77%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 162 KVASRYSEEERKERIMRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDN 221
           +V  + +  ER+ R++RY +K+  R F+KTI+YA RK  A+ R R++GRFA+      + 
Sbjct: 268 QVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEA 327

Query: 222 EIPLKTSQLTTPTHNLI 239
           E    TS ++   + ++
Sbjct: 328 EEIFSTSLMSETGYGIV 344

[Close]

BLAST of Lcy07g013730 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 4.0e-04
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 168 SEEERKERIMRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFAR 214
           S  +R+ R++RY +KR  R F KTI+YA RK  A+ R R++GRFA+
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAK 326

[Close]

BLAST of Lcy07g013730 vs. ExPASy TrEMBL
Match: A0A0A0KGC0 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G138620 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 2.0e-102
Identity = 205/276 (74.28%), Postives = 230/276 (83.33%), Query Frame = 0


Query: 3   SSFPHNFHSDQLLHPNNFSDVHHTLLMAAGDTGICAIRNNNNHHHHHHNIHLAATGEETF 62
           +SFPHNF+ D L +PNNFSD+  TLLMAAGDTG+C IRNN    H++ NI L  + EETF
Sbjct: 2   ASFPHNFYPD-LPYPNNFSDL-QTLLMAAGDTGMCGIRNN----HNNDNIDLFVSREETF 61

Query: 63  IPSFDRPTVSPD------ALSPLLTMPYPDLYGPVSDMTVPSLPEFNVGLYGIHSLIGSQ 122
           + SFD+ TVSPD      +LSP LTM +PDLYGPVSDMTVPSLPEFN+  Y IHSLI  Q
Sbjct: 62  VSSFDQ-TVSPDQSSSDTSLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLINCQ 121

Query: 123 LPPVAGACDYGEELFGFVPDLKPFHRDTWGSQSNYEMHGVEETNMKVASRYSEEERKERI 182
            P V G C+YG++L GFVP+LKP +RDTWG+QS YE+H VEETN+KVASRYSEEERKERI
Sbjct: 122 -PQVPGTCNYGDQLIGFVPELKPLYRDTWGNQSRYEIHAVEETNIKVASRYSEEERKERI 181

Query: 183 MRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDN--EIPLKTSQLTTPT 242
           +RYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDN  EIPLKT+Q +TP 
Sbjct: 182 VRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPN 241

Query: 243 HNLIQQRDQTNKEEEEESWLQELAESLMYLPYVTNY 271
           HNLI+Q DQTNK EEEESWLQELA SLMYLPYV NY
Sbjct: 242 HNLIKQIDQTNK-EEEESWLQELATSLMYLPYVANY 268

[Close]

BLAST of Lcy07g013730 vs. ExPASy TrEMBL
Match: A0A1S4E134 (uncharacterized protein LOC103496299 OS=Cucumis melo OX=3656 GN=LOC103496299 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 2.4e-92
Identity = 186/257 (72.37%), Postives = 213/257 (82.88%), Query Frame = 0


Query: 3   SSFPHNFHSDQLLHPNNFSDVHHTLLMAAGDTGICAIRNNNNHHHHHHNIHLAATGEETF 62
           +SFPHNF+SD  L+PNNFSD+  TLLMAAGD+G+C IRNNNN  ++++NI L  + EETF
Sbjct: 2   ASFPHNFYSD--LYPNNFSDL-QTLLMAAGDSGMCGIRNNNN--NNNNNIDLFVSREETF 61

Query: 63  IPSFDRPTVSPD------ALSPLLTMPYPDLYGPVSDMTVPSLPEFNVGLYGIHSLIGSQ 122
           IP FD+ TVSP+       LSP LTM +PDLYGPVSDMTVPSLPEFN+  Y IHSLI  Q
Sbjct: 62  IPFFDQ-TVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLISCQ 121

Query: 123 LPPVAGACDYGEELFGFVPDLKPFHRDTWGSQSNYEMHGVEETNMKVASRYSEEERKERI 182
            P V G C+YG+EL GFVP+LKP +RDTWG+QS YE H VEETN+KVASRYSEEERKERI
Sbjct: 122 -PQVPGTCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERI 181

Query: 183 MRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDN--EIPLKTSQLTTPT 242
           +RYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDN  EIPLKT+Q +TP 
Sbjct: 182 VRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPN 241

Query: 243 HNLIQQRDQTNKEEEEE 252
           HNLI+QRDQT K  + +
Sbjct: 242 HNLIKQRDQTGKAVDSQ 251

[Close]

BLAST of Lcy07g013730 vs. ExPASy TrEMBL
Match: A0A6J1FX75 (zinc finger protein CONSTANS-LIKE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448335 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.3e-90
Identity = 189/269 (70.26%), Postives = 220/269 (81.78%), Query Frame = 0


Query: 3   SSFPHNFHSDQLLHPNNFSDVHHTLLMAAGDTGICAIRNNNNHHHHHHNIHLAATGEETF 62
           +SFPH F+SD  L+PNNFSD+  +LLMAAGD GI  IRN+++   +++NI+L   GEETF
Sbjct: 2   ASFPH-FYSDH-LYPNNFSDL-QSLLMAAGDPGIGGIRNDDD---NNNNINL-PHGEETF 61

Query: 63  IPSFDR-PTVSPDALSPLLTMPYPDLYGPVSDMTVPSLPEFNVGLYGIHSLIGSQLPPVA 122
           + + D+  +   D  SPLLTMPYPDL       TVPS PEFN G+YGIHS+IG+Q P V 
Sbjct: 62  VSTLDQMASFESDTQSPLLTMPYPDL-------TVPSSPEFNKGMYGIHSVIGNQ-PRVP 121

Query: 123 GACDYGEELFGFVPDLKPFHRDTWGSQSNYEMHGVEETNMKVASRYSEEERKERIMRYLK 182
           G+C+Y +EL GFVPDLKPF+R+ WG+QS+YE+HGVEETN+KVASRYSEEERKERI+RYLK
Sbjct: 122 GSCNYDDELLGFVPDLKPFYRNIWGTQSSYELHGVEETNIKVASRYSEEERKERIVRYLK 181

Query: 183 KRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNEIPLKTSQLTTPTHNLIQQR 242
           KRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCD EI LKT+ LT P+HN     
Sbjct: 182 KRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDTEIHLKTNHLTAPSHN----- 241

Query: 243 DQTNKEEEEESWLQELAESLMYLPYVTNY 271
            QTNKEEEEESWLQELA SLMYLPYVTNY
Sbjct: 242 -QTNKEEEEESWLQELAASLMYLPYVTNY 249

[Close]

BLAST of Lcy07g013730 vs. ExPASy TrEMBL
Match: A0A6J1JCW3 (uncharacterized protein LOC111483882 OS=Cucurbita maxima OX=3661 GN=LOC111483882 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.9e-90
Identity = 190/269 (70.63%), Postives = 216/269 (80.30%), Query Frame = 0


Query: 3   SSFPHNFHSDQLLHPNNFSDVHHTLLMAAGDTGICAIRNNNNHHHHHHNIHLAATGEETF 62
           +SFPH F+SD LL+PNNFSD+  +LLMAAGD  +  IRN+NN    ++NI L   GEETF
Sbjct: 2   ASFPH-FYSD-LLYPNNFSDL-QSLLMAAGDPRVGGIRNDNN----NNNIDL-PRGEETF 61

Query: 63  IPSFDR-PTVSPDALSPLLTMPYPDLYGPVSDMTVPSLPEFNVGLYGIHSLIGSQLPPVA 122
           +PSFD+  +   D  SPLLTMPYPDL       TVPS PEFN G+YGIHS+  SQ P   
Sbjct: 62  VPSFDQMASFESDTQSPLLTMPYPDL-------TVPSSPEFNKGMYGIHSVSDSQPP--- 121

Query: 123 GACDYGEELFGFVPDLKPFHRDTWGSQSNYEMHGVEETNMKVASRYSEEERKERIMRYLK 182
            +C+Y +EL  FVP+LKPF+R+ WG+QS+YEMHGVEETN+KVASRYSEEERKERI+RYLK
Sbjct: 122 ASCNYDDELLHFVPNLKPFYRNIWGTQSSYEMHGVEETNIKVASRYSEEERKERIVRYLK 181

Query: 183 KRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNEIPLKTSQLTTPTHNLIQQR 242
           KRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCD EIPLKT+ LT P+HN     
Sbjct: 182 KRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDTEIPLKTNHLTAPSHN----- 241

Query: 243 DQTNKEEEEESWLQELAESLMYLPYVTNY 271
            QTNKEEEEESWLQELA SLMYLPYVTNY
Sbjct: 242 -QTNKEEEEESWLQELAASLMYLPYVTNY 246

[Close]

BLAST of Lcy07g013730 vs. ExPASy TrEMBL
Match: A0A6J1FUW6 (zinc finger protein CONSTANS-LIKE 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448335 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 3.1e-84
Identity = 173/243 (71.19%), Postives = 199/243 (81.89%), Query Frame = 0


Query: 29  MAAGDTGICAIRNNNNHHHHHHNIHLAATGEETFIPSFDR-PTVSPDALSPLLTMPYPDL 88
           MAAGD GI  IRN+++   +++NI+L   GEETF+ + D+  +   D  SPLLTMPYPDL
Sbjct: 1   MAAGDPGIGGIRNDDD---NNNNINL-PHGEETFVSTLDQMASFESDTQSPLLTMPYPDL 60

Query: 89  YGPVSDMTVPSLPEFNVGLYGIHSLIGSQLPPVAGACDYGEELFGFVPDLKPFHRDTWGS 148
                  TVPS PEFN G+YGIHS+IG+Q P V G+C+Y +EL GFVPDLKPF+R+ WG+
Sbjct: 61  -------TVPSSPEFNKGMYGIHSVIGNQ-PRVPGSCNYDDELLGFVPDLKPFYRNIWGT 120

Query: 149 QSNYEMHGVEETNMKVASRYSEEERKERIMRYLKKRNQRNFNKTIKYACRKTLADRRTRV 208
           QS+YE+HGVEETN+KVASRYSEEERKERI+RYLKKRNQRNFNKTIKYACRKTLADRRTRV
Sbjct: 121 QSSYELHGVEETNIKVASRYSEEERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRTRV 180

Query: 209 RGRFARNNNELCDNEIPLKTSQLTTPTHNLIQQRDQTNKEEEEESWLQELAESLMYLPYV 268
           RGRFARNNNELCD EI LKT+ LT P+HN      QTNKEEEEESWLQELA SLMYLPYV
Sbjct: 181 RGRFARNNNELCDTEIHLKTNHLTAPSHN------QTNKEEEEESWLQELAASLMYLPYV 225

Query: 269 TNY 271
           TNY
Sbjct: 241 TNY 225

[Close]

BLAST of Lcy07g013730 vs. NCBI nr
Match: XP_004150045.2 (uncharacterized protein LOC101221095 [Cucumis sativus])

HSP 1 Score: 382.1 bits (980), Expect = 4.0e-102
Identity = 205/276 (74.28%), Postives = 230/276 (83.33%), Query Frame = 0


Query: 3   SSFPHNFHSDQLLHPNNFSDVHHTLLMAAGDTGICAIRNNNNHHHHHHNIHLAATGEETF 62
           +SFPHNF+ D L +PNNFSD+  TLLMAAGDTG+C IRNN    H++ NI L  + EETF
Sbjct: 2   ASFPHNFYPD-LPYPNNFSDL-QTLLMAAGDTGMCGIRNN----HNNDNIDLFVSREETF 61

Query: 63  IPSFDRPTVSPD------ALSPLLTMPYPDLYGPVSDMTVPSLPEFNVGLYGIHSLIGSQ 122
           + SFD+ TVSPD      +LSP LTM +PDLYGPVSDMTVPSLPEFN+  Y IHSLI  Q
Sbjct: 62  VSSFDQ-TVSPDQSSSDTSLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLINCQ 121

Query: 123 LPPVAGACDYGEELFGFVPDLKPFHRDTWGSQSNYEMHGVEETNMKVASRYSEEERKERI 182
            P V G C+YG++L GFVP+LKP +RDTWG+QS YE+H VEETN+KVASRYSEEERKERI
Sbjct: 122 -PQVPGTCNYGDQLIGFVPELKPLYRDTWGNQSRYEIHAVEETNIKVASRYSEEERKERI 181

Query: 183 MRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDN--EIPLKTSQLTTPT 242
           +RYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDN  EIPLKT+Q +TP 
Sbjct: 182 VRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPN 241

Query: 243 HNLIQQRDQTNKEEEEESWLQELAESLMYLPYVTNY 271
           HNLI+Q DQTNK EEEESWLQELA SLMYLPYV NY
Sbjct: 242 HNLIKQIDQTNK-EEEESWLQELATSLMYLPYVANY 268

[Close]

BLAST of Lcy07g013730 vs. NCBI nr
Match: XP_038902616.1 (zinc finger protein CONSTANS-LIKE 1-like [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 8.4e-100
Identity = 206/275 (74.91%), Postives = 228/275 (82.91%), Query Frame = 0


Query: 3   SSFPHNFHSDQLLHPNNFSDVHHTLLMAAGDTGICAIRNNNNHHHHHHNIHLAATGEETF 62
           +SFPH F+SD LL+PNN SD+  +LLMA GDTG+C +RNNNN     +NI  +   EETF
Sbjct: 2   ASFPH-FYSD-LLYPNNLSDL-QSLLMAVGDTGMCDLRNNNN-----NNIDFSLR-EETF 61

Query: 63  IPSFDRPTVSP-----DALSPLLTMPYPDLYGPVSDMTVPSLPEFN-VGLYGIHSLIGSQ 122
           +PSFD+ TVSP     D LSPLLTM YPDLYG VSDM VPSLPEFN +  Y IHSLI + 
Sbjct: 62  VPSFDQ-TVSPEQSSSDTLSPLLTMQYPDLYGSVSDMAVPSLPEFNTMSTYDIHSLISNN 121

Query: 123 LPPVAGACDYGEELFGFVPDLKPFHRDTWGSQSNYEMHGVEETNMKVASRYSEEERKERI 182
            P V G C+Y EE  GFVP+LKP +RDTWGSQS YEM GVEETN+KVASRYSEEERKERI
Sbjct: 122 QPQVPGTCNYSEEFLGFVPELKPLYRDTWGSQSRYEMQGVEETNIKVASRYSEEERKERI 181

Query: 183 MRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCD-NEIPLKTSQLTTPTH 242
           +RYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCD +EIPLKT++LTTPTH
Sbjct: 182 VRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDTDEIPLKTNKLTTPTH 241

Query: 243 NLIQQRDQTNKEEEEESWLQELAESLMYLPYVTNY 271
           NLI+QRDQ NK EEEESWLQELA SLMYLPYVTNY
Sbjct: 242 NLIKQRDQMNK-EEEESWLQELAASLMYLPYVTNY 265

[Close]

BLAST of Lcy07g013730 vs. NCBI nr
Match: KAE8646876.1 (hypothetical protein Csa_021098 [Cucumis sativus])

HSP 1 Score: 365.9 bits (938), Expect = 3.0e-97
Identity = 198/268 (73.88%), Postives = 223/268 (83.21%), Query Frame = 0


Query: 3   SSFPHNFHSDQLLHPNNFSDVHHTLLMAAGDTGICAIRNNNNHHHHHHNIHLAATGEETF 62
           +SFPHNF+ D L +PNNFSD+  TLLMAAGDTG+C IRNN    H++ NI L  + EETF
Sbjct: 2   ASFPHNFYPD-LPYPNNFSDL-QTLLMAAGDTGMCGIRNN----HNNDNIDLFVSREETF 61

Query: 63  IPSFDRPTVSPD------ALSPLLTMPYPDLYGPVSDMTVPSLPEFNVGLYGIHSLIGSQ 122
           + SFD+ TVSPD      +LSP LTM +PDLYGPVSDMTVPSLPEFN+  Y IHSLI  Q
Sbjct: 62  VSSFDQ-TVSPDQSSSDTSLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLINCQ 121

Query: 123 LPPVAGACDYGEELFGFVPDLKPFHRDTWGSQSNYEMHGVEETNMKVASRYSEEERKERI 182
            P V G C+YG++L GFVP+LKP +RDTWG+QS YE+H VEETN+KVASRYSEEERKERI
Sbjct: 122 -PQVPGTCNYGDQLIGFVPELKPLYRDTWGNQSRYEIHAVEETNIKVASRYSEEERKERI 181

Query: 183 MRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDN--EIPLKTSQLTTPT 242
           +RYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDN  EIPLKT+Q +TP 
Sbjct: 182 VRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPN 241

Query: 243 HNLIQQRDQTNKEEEEESWLQELAESLM 263
           HNLI+Q DQTNK EEEESWLQELA SLM
Sbjct: 242 HNLIKQIDQTNK-EEEESWLQELATSLM 260

[Close]

BLAST of Lcy07g013730 vs. NCBI nr
Match: XP_023511907.1 (zinc finger protein CONSTANS-LIKE 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.1 bits (915), Expect = 1.4e-94
Identity = 196/269 (72.86%), Postives = 222/269 (82.53%), Query Frame = 0


Query: 3   SSFPHNFHSDQLLHPNNFSDVHHTLLMAAGDTGICAIRNNNNHHHHHHNIHLAATGEETF 62
           +SFPH F+SD LL+PNNFSD+  TLLMAAGD GI  IRNNN+  ++++NI L   GEETF
Sbjct: 2   ASFPH-FYSD-LLYPNNFSDL-QTLLMAAGDPGIGGIRNNND-DNNNNNIDL-PRGEETF 61

Query: 63  IPSFDR-PTVSPDALSPLLTMPYPDLYGPVSDMTVPSLPEFNVGLYGIHSLIGSQLPPVA 122
           +P+FDR  +   D  SPLLTMPYPDL       T+PS PEFN G+YGIHS+IG+Q P V 
Sbjct: 62  VPAFDRMASFESDTQSPLLTMPYPDL-------TLPSSPEFNKGMYGIHSVIGNQ-PQVP 121

Query: 123 GACDYGEELFGFVPDLKPFHRDTWGSQSNYEMHGVEETNMKVASRYSEEERKERIMRYLK 182
           G+C+Y +EL GFVPDLKPF+R+ WG QS+YEMHGVEETN+KVASRYSEEERKERI+RYLK
Sbjct: 122 GSCNYDDELLGFVPDLKPFYRNIWGPQSSYEMHGVEETNIKVASRYSEEERKERIVRYLK 181

Query: 183 KRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNEIPLKTSQLTTPTHNLIQQR 242
           KRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCD EIPLK + LT P+HN     
Sbjct: 182 KRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDTEIPLKINHLTAPSHN----- 241

Query: 243 DQTNKEEEEESWLQELAESLMYLPYVTNY 271
            QTNKEEEEESWLQELA SLMYLPYVTNY
Sbjct: 242 -QTNKEEEEESWLQELAASLMYLPYVTNY 251

[Close]

BLAST of Lcy07g013730 vs. NCBI nr
Match: XP_016901933.1 (PREDICTED: uncharacterized protein LOC103496299 [Cucumis melo])

HSP 1 Score: 348.6 bits (893), Expect = 4.9e-92
Identity = 186/257 (72.37%), Postives = 213/257 (82.88%), Query Frame = 0


Query: 3   SSFPHNFHSDQLLHPNNFSDVHHTLLMAAGDTGICAIRNNNNHHHHHHNIHLAATGEETF 62
           +SFPHNF+SD  L+PNNFSD+  TLLMAAGD+G+C IRNNNN  ++++NI L  + EETF
Sbjct: 2   ASFPHNFYSD--LYPNNFSDL-QTLLMAAGDSGMCGIRNNNN--NNNNNIDLFVSREETF 61

Query: 63  IPSFDRPTVSPD------ALSPLLTMPYPDLYGPVSDMTVPSLPEFNVGLYGIHSLIGSQ 122
           IP FD+ TVSP+       LSP LTM +PDLYGPVSDMTVPSLPEFN+  Y IHSLI  Q
Sbjct: 62  IPFFDQ-TVSPEQSSSDTGLSPFLTMQHPDLYGPVSDMTVPSLPEFNMSTYDIHSLISCQ 121

Query: 123 LPPVAGACDYGEELFGFVPDLKPFHRDTWGSQSNYEMHGVEETNMKVASRYSEEERKERI 182
            P V G C+YG+EL GFVP+LKP +RDTWG+QS YE H VEETN+KVASRYSEEERKERI
Sbjct: 122 -PQVPGTCNYGDELLGFVPELKPLYRDTWGNQSRYETHAVEETNIKVASRYSEEERKERI 181

Query: 183 MRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDN--EIPLKTSQLTTPT 242
           +RYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDN  EIPLKT+Q +TP 
Sbjct: 182 VRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNDHEIPLKTNQFSTPN 241

Query: 243 HNLIQQRDQTNKEEEEE 252
           HNLI+QRDQT K  + +
Sbjct: 242 HNLIKQRDQTGKAVDSQ 251

[Close]

BLAST of Lcy07g013730 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 108.6 bits (270), Expect = 8.0e-24
Identity = 71/149 (47.65%), Postives = 89/149 (59.73%), Query Frame = 0


Query: 128 EELFGFVPDLKPFHRDTWGSQS--NYEMHGVEETNMKVASRYSEEERKERIMRYLKKRNQ 187
           +E +GF P++KP  R   G QS  N E     E N KV  RYS EERK+RIMRYLKK+NQ
Sbjct: 94  QEYYGFSPEIKPLFRPATGEQSWGNSEGGIQAEPNTKV-GRYSVEERKDRIMRYLKKKNQ 153

Query: 188 RNFNKTIKYACRKTLADRRTRVRGRFARNNNELCDNEIPLKTSQLTTPTHNLIQQR---- 247
           RNFNKTIKY CRKTLADRR RVRGRFAR NN+ C+ +  +      +  HN   ++    
Sbjct: 154 RNFNKTIKYVCRKTLADRRVRVRGRFAR-NNDTCEEQPHM------SKNHNNHSEKEEDM 213

Query: 248 -----DQTNKEEEEESWLQELAESLMYLP 266
                D   + E ++ WL E   +L+  P
Sbjct: 214 FSGSDDYLIQMEHDDGWLHEAMSNLIPFP 234

[Close]

BLAST of Lcy07g013730 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 82.4 bits (202), Expect = 6.2e-16
Identity = 50/78 (64.10%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 147 SQSNYEMHGVEETNMKVASRYSEEERKERIMRYLKKRNQRNFNKTIKYACRKTLADRRTR 206
           S  N  M   EE N KV  RYS EERKE+I +Y  KRNQRNF KTIKYACRKTLAD R R
Sbjct: 191 SSENSTMPFSEEQNFKV-GRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPR 250

Query: 207 VRGRFARNNNELCDNEIP 225
           +RGRFARN+  +   EIP
Sbjct: 251 IRGRFARNDEVV---EIP 264

[Close]

BLAST of Lcy07g013730 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 79.0 bits (193), Expect = 6.8e-15
Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 152 EMHGVEETNMKVASRYSEEERKERIMRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRF 211
           +++G+E++ +    + S E+RKE+I RY+KKRN+RNFNK IKYACRKTLAD R RVRGRF
Sbjct: 291 DINGLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRF 350

Query: 212 ARNNNELCDNEIPLKTSQLTTPTHNLIQQRDQTNKEEEE 251
           A+N      +E      Q  +  H+   + D   K+EE+
Sbjct: 351 AKN------DEFGEPNRQAFSSHHDDEDEDDMGVKDEEQ 383

[Close]

BLAST of Lcy07g013730 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein )

HSP 1 Score: 79.0 bits (193), Expect = 6.8e-15
Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 152 EMHGVEETNMKVASRYSEEERKERIMRYLKKRNQRNFNKTIKYACRKTLADRRTRVRGRF 211
           +++G+E++ +    + S E+RKE+I RY+KKRN+RNFNK IKYACRKTLAD R RVRGRF
Sbjct: 290 DINGLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRF 349

Query: 212 ARNNNELCDNEIPLKTSQLTTPTHNLIQQRDQTNKEEEE 251
           A+N      +E      Q  +  H+   + D   K+EE+
Sbjct: 350 AKN------DEFGEPNRQAFSSHHDDEDEDDMGVKDEEQ 382

[Close]

BLAST of Lcy07g013730 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein )

HSP 1 Score: 76.3 bits (186), Expect = 4.4e-14
Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 0


Query: 148 QSNYEMHGVEETNMKVASRYSEEERKERIMRYLKKRNQRNFNKTIKYACRKTLADRRTRV 207
           Q   E+ G+++ +     + S E+RKE+I RY+KKRN+RNF+K IKYACRKTLAD R RV
Sbjct: 264 QLGTEITGLDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRV 323

Query: 208 RGRFARNN 216
           RGRFA+N+
Sbjct: 324 RGRFAKND 331

The following BLAST results are available for this feature:

BLAST of Lcy07g013730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940T9	4.8e-05	47.17	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9SK53	1.4e-04	45.90	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
O50055	3.1e-04	43.40	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q96502	4.0e-04	33.77	Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1...	[more]
Q9FHH8	4.0e-04	50.00	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]

BLAST of Lcy07g013730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGC0	2.0e-102	74.28	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G138620 PE=4 SV...	[more]
A0A1S4E134	2.4e-92	72.37	uncharacterized protein LOC103496299 OS=Cucumis melo OX=3656 GN=LOC103496299 PE=...	[more]
A0A6J1FX75	1.3e-90	70.26	zinc finger protein CONSTANS-LIKE 1-like isoform X1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1JCW3	2.9e-90	70.63	uncharacterized protein LOC111483882 OS=Cucurbita maxima OX=3661 GN=LOC111483882...	[more]
A0A6J1FUW6	3.1e-84	71.19	zinc finger protein CONSTANS-LIKE 1-like isoform X2 OS=Cucurbita moschata OX=366...	[more]

BLAST of Lcy07g013730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150045.2	4.0e-102	74.28	uncharacterized protein LOC101221095 [Cucumis sativus]	[more]
XP_038902616.1	8.4e-100	74.91	zinc finger protein CONSTANS-LIKE 1-like [Benincasa hispida]	[more]
KAE8646876.1	3.0e-97	73.88	hypothetical protein Csa_021098 [Cucumis sativus]	[more]
XP_023511907.1	1.4e-94	72.86	zinc finger protein CONSTANS-LIKE 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_016901933.1	4.9e-92	72.37	PREDICTED: uncharacterized protein LOC103496299 [Cucumis melo]	[more]

BLAST of Lcy07g013730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12890.1	8.0e-24	47.65	activator of spomin::LUC2	[more]
AT5G41380.1	6.2e-16	64.10	CCT motif family protein	[more]
AT2G33350.1	6.8e-15	46.46	CCT motif family protein	[more]
AT2G33350.2	6.8e-15	46.46	CCT motif family protein	[more]
AT1G04500.1	4.4e-14	57.35	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 172..214 e-value: 3.2E-17 score: 62.4
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 172..214 score: 15.060639
None	No IPR available	PANTHER	PTHR31717:SF56	ACTIVATOR OF SPOMIN::LUC2	coord: 1..268
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g013730.1	Lcy07g013730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding