Lcy07g012850 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g012850
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RNA polymerase II subunit 5-mediating protein homolog
Location	Chr07: 42029422 .. 42033438 (-)
RNA-Seq Expression	Lcy07g012850
Synteny	Lcy07g012850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGCTTTTCCCTACACTTCTCTTTCTTCTCCCTCTATTTTCTTTCTTCTTCCTATCTCCCTCTTTACAGCAACCGTCCGCCGGTGCAACCTCTGCCGCAGTGGCACGCCGCGACTGTACACTGTATGCCTCCATCGCCCTTTTCTTTCTTCTCTTCCCATTTCTCTTCGCTGCAACTGCCCCTGCACGCCGCCCTTATTTTGCATCCGCCGCACGACTCACTGCATTCTTCTGCTGCTTCTAGTTGCCAGGTCCACTTTCAATCTTCCACACATCCCACTATCAATCGCGTTCTCACAGATAATTTTTCTTTTATTCTTTGTTCATTGTGTCTTTTTAAATTCAACCAATCTTAAAAGCAGCGTAAATTGGGGTCTAAAATTGAGTATTAGAGAGTGTGACTATGGAAGGAGGAGGAGCAAAGGGAACAGTGACGTCGCTGTCCTCTCTGTTTCCTGCTGAGGAGGCCCACAAGGCAGCGACGCGCGTTCAAGGTGCGATTTCTGAGAAGCAGAGGGAGCTCGAGCATCTCCGAGGCTTCATCTCTGATAATGCCAGCCTGATCAACCTCGTTCAAAAGTTACCTGAAGAGCTCCACCACGAAGTCATGGTACTTTTACTTCTTCCTTTGTATTGGGTGTTGAGCGTTTTTAGCGTTTTTTGTGATAGAAAAAGAAAATTATGTTTGATTGTGATATCTTTGATCACTTGATGAATTTATTTGTGCTTCGTTGTGATTTTTGTTTGGAAGGTTCCATTTGGGAAGGCAGCGTTTTTTCCGGGGCGGTTGATTCATACCAACGAGTTTCTGGTAATGTATCGTGCTCTCTGATACCTAATTTATTGGAAAATTGTGATCTATTTGATTGGTAAGAAGGGACAAGGATATTATACGCAATGGGTTCATAAAGTAGATATTCCTGTTGGTTTTCAAGTAATAAGAGCTTATTTCAGTGGAGCACATGGGACTGGTTTCTATCGTTCTTCTTTCCACTATCTTAACGACTCATATTACTCTCTGAGTACATCATCAAAGCCCCTTGTATAGCTTTGAATTGTGTTGCAAAATTAAGGGGAAAGGAGATTATTTATGGGTTAAAGAAAATCACTCTTTAGGTTTTGATCACTAAATTGGAAATGTTTCTGGCTGAGTTCTGGACAGAATATGTGAGGAGGTTTTCTTTTGAAGACATCGAGTTGAGAGCCAGACTTAAATCCAAGTGCAGGTTCTTCTCGGAGAAGGTTACTATGCTGAGAGAACATCCAAACAAACAGTGGAGATCTTGAAAAGGAGAGGTAAAGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGAGGATCTTAAAGCTCAGGCCTCATTTTTTGATGCTACGGCTTCTGAAGCTGCTGTAAGTTTAGCAATCAATTGGTAAACTATGCCTGGGCGTGAAGTTGATACCAGTATCCTATTTTACTCTCTGGCACTGAAATTTTGATACGTGCTGTTAAAAGCCTTACTGATAGTTTGTATATTCTACTTGTTGGGATGAGGCCTTTTCTCCCGTTGTTTCTTGTTATGTTTCTTTAATGCAAGTTTTGTGTCATGTATATTAATGAAAAAGGAAGTATATATATGGGAGAGAGAGAGAGAGGCCAAATAGTTTAGATGGGACAAGGGTTACGAACTTACGAGGTATGCTTGAGAATTACATAATTTACCTTTACAGAAAATTTTCTTGTTTAATATGTTTGAATTTCGTTTCTGTTTTACAATGACTAGGATATTGTCTAAGTTGAAGTTTTGAGAGAAATAAAGGGAAGAGTTGGATCAAAATATTCTGTCCATCTTAACCAATAACCAGAGAGCAAAAATAAATGTTGGCCGTTTAAAAAATAGATGAACAGTCTGAACTAGTACTTAAAGATCTCTCCTAGACATTTTTTATGATTGACACGGAAATAATTTAATGGAACTTGCTATTATGGTTGCTGTTTCTTATTCAACAAATACTAGTTTCTAAAGGTCATGCATGATAACATTATTGACATGGGAAAGAAAGCTTAAAATAAATTAACTCTGGTTGGCTAGAATTAAAAGGGAAACAAAGGAATTATTATTGTAAAAAAGTCTCTTGGCAATGAGCTTTACATAGAAGCTAGTAAATGTACTTTAGCTATGTTGACCAGATTATCATACAATACTAAATTACTAATGTTGATGTTCATTTTACATTTCCATCAGGAGGGTCTGGTTGAGATAAAAGAGGAGTATGTGGAGGAAAACTCTAGTGAGCAGGAATCTGAATCAGGTAGGTTGTTATACCTTTCCCTCCTTTTGTTGCTATAGGATGTTTTTGTAGAGTTTTTGTTGGTACAGAGCTTATGACTTCCTGATGGTACAAGTTTTTGTTCTAGTTAATCCTGGGTCAATTGTGAGAGTTAAGCTGTCATTTTTCTTTCCACAACTTGATTCTTCTCCTCTCTATTGTATTGTTTATGAAGTATCTAAGGATTGACAATTTGGCATTGTAAGTATGTGAGGCCTTGTCTACTACACATATGAATAAATGTACTTAACTCTTGGAGTTCCCTCTATTGTATGCATCATAAGCATGTTCGGATGTTTATATGAACTACTTGTAAGCTCAGGTAAAAACGGATGAATTACAATGATGTCTTGGTAATATGAACTCTATGACACATGTCAGCCATTGTTTGTCTCTTTTCAGGAGTACACAAGCAAGATGATCCTAATGATCCTGGAATCGATAAGGAAAAAATTGCAGAAGAAGATGAAGAGTATGCCCGTATAATGTCCAGATTGGATGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGCGACCAAAGTGAAGAAGATGAGGGAGAGAAAGAAACTTCAAATCTATCTTTAGAGAAGTTTCACGATGATAAGCACAGCTATTCAAAGGTAGTGTTAGTGTTAGGATTAAATGCCTTAGAGGTTTAAAGCTCGCAGAGACACATGGTCATCGACAAACTTACTAGATCGATTGGTGATATATCATTACCCATTTCTGATGATTGATTTCTCTGTAAATTTTTCAGGCAAGTACATCTGCTTGGCTGAGGGAAGAAAATATAGGGAGTAAAGAGCTACCGGACAAGTATCAGCAGCACCAAGAGGCTTCTACCAAACCATCAAATGTGACCAAGCTCTTATTTGCTCATTTTTTGCTTTCCTGTCTATGTATCTTTGTTATTTAGTGAATATAATTGTTTTATTAAAACAGCATTCAGTCTTATATTATATTTTATTATGCAGTGTTCAGGTTTGTCAGTACAATCTTCACCCAGAGGTTAGTCTTCACCTCTTTATTCCCCCTCATTTGTGCATTATCAAATGTAATTTGCCATTTATGTGTGGCATTATTTCGTGTTTCATAGTCATAATGGTTAATTCTATCGGATTGATAAACTGTTTTTACCACCATATTTATCCATTCCAACTATAGCTGTTAGAATGATTTCTGTCATAACTTTTCCAGAAGGCACGTCACGAGTGAGAAACCCTAATTCTGCTGCAAAGTCTGTAACTTTTGCTGAAGTAAACGAAAAGAATCAAACATTGCCTCCATCTACCAGTGAGGTACTTTTGAAGCTTTATCATGCAGATTTTTAGATGCTCTGTTGGTCTTAGAATATGGATTTTCCCTAAATTTTGAGGTTGTTAATAGTTATCAGATAACTTTGAGGCAAGTTATAATTTTTGGCCTCCTTAATCCATGTTATGTCCTTTCTATCGGGTGTAGGCTTTCACAGGATCCATTGTTGAGCGACCTCCTATTATACCAAAAACTTCTAAACAAGAAACAGAAACTCCATTGCAGGTGGTAGATTTGCTTTGTTTACACCATTCTTAATATCATCATTTTACTCGTTCATATCACCATTCTTAATATCAAAAAGTTAATTTACTTTTTGATTTGGCAGCCTTCTGGTTCTCAACCTTCAAAACCGGTATCCAGATTCAAGATGCAAAGAAGATAA

mRNA sequence

CATGCTTTTCCCTACACTTCTCTTTCTTCTCCCTCTATTTTCTTTCTTCTTCCTATCTCCCTCTTTACAGCAACCGTCCGCCGGTGCAACCTCTGCCGCAGTGGCACGCCGCGACTGTACACTGTATGCCTCCATCGCCCTTTTCTTTCTTCTCTTCCCATTTCTCTTCGCTGCAACTGCCCCTGCACGCCGCCCTTATTTTGCATCCGCCGCACGACTCACTGCATTCTTCTGCTGCTTCTAGTTGCCAGGAGGAGGAGCAAAGGGAACAGTGACGTCGCTGTCCTCTCTGTTTCCTGCTGAGGAGGCCCACAAGGCAGCGACGCGCGTTCAAGGTGCGATTTCTGAGAAGCAGAGGGAGCTCGAGCATCTCCGAGGCTTCATCTCTGATAATGCCAGCCTGATCAACCTCGTTCAAAAGTTACCTGAAGAGCTCCACCACGAAGTCATGGTTCCATTTGGGAAGGCAGCGTTTTTTCCGGGGCGGTTGATTCATACCAACGAGTTTCTGGTTCTTCTCGGAGAAGGTTACTATGCTGAGAGAACATCCAAACAAACAGTGGAGATCTTGAAAAGGAGAGGTAAAGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGAGGATCTTAAAGCTCAGGCCTCATTTTTTGATGCTACGGCTTCTGAAGCTGCTGAGGGTCTGGTTGAGATAAAAGAGGAGTATGTGGAGGAAAACTCTAGTGAGCAGGAATCTGAATCAGGAGTACACAAGCAAGATGATCCTAATGATCCTGGAATCGATAAGGAAAAAATTGCAGAAGAAGATGAAGAGTATGCCCGTATAATGTCCAGATTGGATGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGCGACCAAAGTGAAGAAGATGAGGGAGAGAAAGAAACTTCAAATCTATCTTTAGAGAAGTTTCACGATGATAAGCACAGCTATTCAAAGGCAAGTACATCTGCTTGGCTGAGGGAAGAAAATATAGGGAGTAAAGAGCTACCGGACAAGTATCAGCAGCACCAAGAGGCTTCTACCAAACCATCAAATTGTTCAGGTTTGTCAGTACAATCTTCACCCAGAGAAGGCACGTCACGAGTGAGAAACCCTAATTCTGCTGCAAAGTCTGTAACTTTTGCTGAAGTAAACGAAAAGAATCAAACATTGCCTCCATCTACCAGTGAGGCTTTCACAGGATCCATTGTTGAGCGACCTCCTATTATACCAAAAACTTCTAAACAAGAAACAGAAACTCCATTGCAGCCTTCTGGTTCTCAACCTTCAAAACCGGTATCCAGATTCAAGATGCAAAGAAGATAA

Coding sequence (CDS)

ATGGTTCCATTTGGGAAGGCAGCGTTTTTTCCGGGGCGGTTGATTCATACCAACGAGTTTCTGGTTCTTCTCGGAGAAGGTTACTATGCTGAGAGAACATCCAAACAAACAGTGGAGATCTTGAAAAGGAGAGGTAAAGCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGAGGATCTTAAAGCTCAGGCCTCATTTTTTGATGCTACGGCTTCTGAAGCTGCTGAGGGTCTGGTTGAGATAAAAGAGGAGTATGTGGAGGAAAACTCTAGTGAGCAGGAATCTGAATCAGGAGTACACAAGCAAGATGATCCTAATGATCCTGGAATCGATAAGGAAAAAATTGCAGAAGAAGATGAAGAGTATGCCCGTATAATGTCCAGATTGGATGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGCGACCAAAGTGAAGAAGATGAGGGAGAGAAAGAAACTTCAAATCTATCTTTAGAGAAGTTTCACGATGATAAGCACAGCTATTCAAAGGCAAGTACATCTGCTTGGCTGAGGGAAGAAAATATAGGGAGTAAAGAGCTACCGGACAAGTATCAGCAGCACCAAGAGGCTTCTACCAAACCATCAAATTGTTCAGGTTTGTCAGTACAATCTTCACCCAGAGAAGGCACGTCACGAGTGAGAAACCCTAATTCTGCTGCAAAGTCTGTAACTTTTGCTGAAGTAAACGAAAAGAATCAAACATTGCCTCCATCTACCAGTGAGGCTTTCACAGGATCCATTGTTGAGCGACCTCCTATTATACCAAAAACTTCTAAACAAGAAACAGAAACTCCATTGCAGCCTTCTGGTTCTCAACCTTCAAAACCGGTATCCAGATTCAAGATGCAAAGAAGATAA

Protein sequence

MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMEDLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEEDEEYARIMSRLDELEKEEELAAANGDQSEEDEGEKETSNLSLEKFHDDKHSYSKASTSAWLREENIGSKELPDKYQQHQEASTKPSNCSGLSVQSSPREGTSRVRNPNSAAKSVTFAEVNEKNQTLPPSTSEAFTGSIVERPPIIPKTSKQETETPLQPSGSQPSKPVSRFKMQRR

Homology

[Close]

BLAST of Lcy07g012850 vs. ExPASy Swiss-Prot
Match: Q54HG4 (RNA polymerase II subunit 5-mediating protein homolog OS=Dictyostelium discoideum OX=44689 GN=rmp PE=3 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 3.9e-13
Identity = 69/227 (30.40%), Postives = 115/227 (50.66%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVP GK AFF G L +TNE L+LLG+ Y+A+R+SKQT++I++RR K +D+ ++ L+  ++
Sbjct: 50  MVPMGKLAFFEGNLKNTNEILILLGDNYFAKRSSKQTIDIIQRRDKDIDTSINDLREQIK 109

Query: 61  DLKAQAS----FFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQ------------ 120
            LK + S       A   +  + +VEIKEEY  +   E+E +     Q            
Sbjct: 110 GLKQRVSMTTDLSKALHEKEYDNIVEIKEEYNSDEEREKEKKRKQKPQKSTTTTTTTTTS 169

Query: 121 DDPNDPGIDKEKIAEEDEEYARIMSRLDELEKEEELAAANGDQSEEDEGEKETSNLSL-- 180
            D      +K+K  E DEE+ +++ RL  LE++E       D  EE+  +K    L +  
Sbjct: 170 KDKPKTEEEKKKSKEMDEEFDKMLKRLSILEEKEN--KMGDDYDEEEFNKKFNKKLDITG 229

Query: 181 --EKFHDDKHSYSKASTSAWLREENIGSKELPDKYQQHQEASTKPSN 208
             E++ DD ++ +         +++    +  + YQ+      KP N
Sbjct: 230 SDEEYDDDNYNNNNDD------DDDNDEDDDREYYQEEGFEDEKPEN 268

[Close]

BLAST of Lcy07g012850 vs. ExPASy Swiss-Prot
Match: O94763 (Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens OX=9606 GN=URI1 PE=1 SV=3)

HSP 1 Score: 69.7 bits (169), Expect = 6.3e-11
Identity = 62/196 (31.63%), Postives = 102/196 (52.04%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFG  AF PG+L+HTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D LK +M+
Sbjct: 77  MVPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMK 136

Query: 61  DLKAQASFFD--ATASEAAEGLVEIKEEY-----------VEENSSEQESESGVHKQDDP 120
           + +++  F +     S+AA  +V+I+EE            +      +   S + + D  
Sbjct: 137 NFESRVEFTEDLQKMSDAAGDIVDIREEIKCDFEFKAKHRIAHKPHSKPKTSDIFEADIA 196

Query: 121 NDPGIDKEKIAEEDEEYARIMSRLDELEKEEEL----------AAANGDQSEEDEGEKET 172
           ND    K K    D+E   + +RL+ELE++EEL            ANG+ +   E EKE 
Sbjct: 197 NDV---KSKDLLADKE---LWARLEELERQEELLGELDSKPDTVIANGEDTTSSEEEKED 256

[Close]

BLAST of Lcy07g012850 vs. ExPASy Swiss-Prot
Match: Q3B7M7 (Unconventional prefoldin RPB5 interactor OS=Bos taurus OX=9913 GN=URI1 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.6e-09
Identity = 59/198 (29.80%), Postives = 102/198 (51.52%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFG  AF PG+L+HTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D LK +M+
Sbjct: 69  MVPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMK 128

Query: 61  DLKAQASFFD--ATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIA 120
           + +++  F +     S+AA  +V+I+EE   +   + +          P    I + + A
Sbjct: 129 NFESRVEFTEDLQKMSDAAGDIVDIREEIKTDFEFKAKHRIAHKPHSKPKTSDIFEAEFA 188

Query: 121 EE--------DEEYARIMSRLDELEKEEEL------------AAANGDQSEEDEGEKETS 177
            +        D+E   +  RL+ELE++EEL              ANG+    +E EKE  
Sbjct: 189 NDLKSKDLLADKE---LWDRLEELERQEELLGEIDIDSKPDTVIANGEDVSSEE-EKEDQ 248

[Close]

BLAST of Lcy07g012850 vs. ExPASy Swiss-Prot
Match: Q3TLD5 (Unconventional prefoldin RPB5 interactor OS=Mus musculus OX=10090 GN=Uri1 PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-08
Identity = 56/177 (31.64%), Postives = 92/177 (51.98%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFG  AF PG+L+HTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D  K +++
Sbjct: 75  MVPFGPLAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDFKKVLK 134

Query: 61  DLKAQASFFD--ATASEAAEGLVEIKEEYVE--ENSSEQESESGVHKQDDPND------- 120
           + +++  F +     S+AA   V+I+EE     E   +Q      H +   +D       
Sbjct: 135 NFESRVEFTEDLQKMSDAAGDFVDIREEIKSDFEFKGKQRIAHKPHSKPKTSDIFEADFE 194

Query: 121 PGIDKEKIAEEDEEYARIMSRLDELEKEEEL----------AAANGDQSEEDEGEKE 157
            G+  +   + DE +A    RL+ELE++EEL            ANG+     E EKE
Sbjct: 195 NGVKPKNTFDADELWA----RLEELERQEELLGELESKPDTVIANGEDRVSSEEEKE 247

[Close]

BLAST of Lcy07g012850 vs. ExPASy TrEMBL
Match: A0A5D3BZL3 (RNA polymerase II subunit 5-mediating protein-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002120 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 6.1e-118
Identity = 246/307 (80.13%), Postives = 266/307 (86.64%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKA M+
Sbjct: 142 MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMD 201

Query: 61  DLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEE 120
           +LKA+ASFFDATASEA EGLVEIKEEYVEEN  EQE  SGV+KQD     G+D+ KIAE 
Sbjct: 202 NLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEI 261

Query: 121 DEEYARIMSRLDELEKEEELAAANGDQS-EEDEGEKETSNLSLEKFHDDKHSYSKASTSA 180
           D EYAR+M+R DELEKEEELAAANG++S +EDE EKET N SLEKF+DDK SYS+ STSA
Sbjct: 262 DAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSA 321

Query: 181 WLREENIGSKELPDKYQQHQEASTKPSNCSGLSVQSSPREG----------TSRVRNPNS 240
           WLR+EN+ SKEL DKYQ+ QEAST PSNCSGLSVQSSP+E           + RVRNPN 
Sbjct: 322 WLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQRVRNPNP 381

Query: 241 AAKSVTFAEVNEKNQTLPPSTSEAFTGSIVERPPIIPKTSKQETETPLQPSGSQPSKPVS 297
           AAKSV FAEV EK QTLPPSTS+AFTGSI+ERPPIIPKTSKQETETPLQPSGSQPSKPVS
Sbjct: 382 AAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVS 441

[Close]

BLAST of Lcy07g012850 vs. ExPASy TrEMBL
Match: A0A1S4DX32 (RNA polymerase II subunit 5-mediating protein homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490540 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 6.1e-118
Identity = 246/307 (80.13%), Postives = 266/307 (86.64%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKA M+
Sbjct: 69  MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMD 128

Query: 61  DLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEE 120
           +LKA+ASFFDATASEA EGLVEIKEEYVEEN  EQE  SGV+KQD     G+D+ KIAE 
Sbjct: 129 NLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEI 188

Query: 121 DEEYARIMSRLDELEKEEELAAANGDQS-EEDEGEKETSNLSLEKFHDDKHSYSKASTSA 180
           D EYAR+M+R DELEKEEELAAANG++S +EDE EKET N SLEKF+DDK SYS+ STSA
Sbjct: 189 DAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSA 248

Query: 181 WLREENIGSKELPDKYQQHQEASTKPSNCSGLSVQSSPREG----------TSRVRNPNS 240
           WLR+EN+ SKEL DKYQ+ QEAST PSNCSGLSVQSSP+E           + RVRNPN 
Sbjct: 249 WLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQRVRNPNP 308

Query: 241 AAKSVTFAEVNEKNQTLPPSTSEAFTGSIVERPPIIPKTSKQETETPLQPSGSQPSKPVS 297
           AAKSV FAEV EK QTLPPSTS+AFTGSI+ERPPIIPKTSKQETETPLQPSGSQPSKPVS
Sbjct: 309 AAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVS 368

[Close]

BLAST of Lcy07g012850 vs. ExPASy TrEMBL
Match: A0A5A7V404 (RNA polymerase II subunit 5-mediating protein-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003700 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 5.2e-117
Identity = 245/307 (79.80%), Postives = 265/307 (86.32%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKA M+
Sbjct: 69  MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMD 128

Query: 61  DLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEE 120
           +LKA+ASFFDATASEA EGLVEIKEEYVEEN  EQE  S V+KQD     G+D+ KIAE 
Sbjct: 129 NLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGVDEAKIAEI 188

Query: 121 DEEYARIMSRLDELEKEEELAAANGDQS-EEDEGEKETSNLSLEKFHDDKHSYSKASTSA 180
           D EYAR+M+R DELEKEEELAAANG++S +EDE EKET N SLEKF+DDK SYS+ STSA
Sbjct: 189 DAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSA 248

Query: 181 WLREENIGSKELPDKYQQHQEASTKPSNCSGLSVQSSPREG----------TSRVRNPNS 240
           WLR+EN+ SKEL DKYQ+ QEAST PSNCSGLSVQSSP+E           + RVRNPN 
Sbjct: 249 WLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQRVRNPNP 308

Query: 241 AAKSVTFAEVNEKNQTLPPSTSEAFTGSIVERPPIIPKTSKQETETPLQPSGSQPSKPVS 297
           AAKSV FAEV EK QTLPPSTS+AFTGSI+ERPPIIPKTSKQETETPLQPSGSQPSKPVS
Sbjct: 309 AAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVS 368

[Close]

BLAST of Lcy07g012850 vs. ExPASy TrEMBL
Match: A0A1S3BK98 (RNA polymerase II subunit 5-mediating protein homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490540 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 7.5e-116
Identity = 245/307 (79.80%), Postives = 265/307 (86.32%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKA M+
Sbjct: 69  MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMD 128

Query: 61  DLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEE 120
           +LKA+ASFFDATASEA EGLVEIKEEYVEEN  EQE  S V+KQD     G+D+ KIAE 
Sbjct: 129 NLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS-VNKQDVTRVSGVDEAKIAEI 188

Query: 121 DEEYARIMSRLDELEKEEELAAANGDQS-EEDEGEKETSNLSLEKFHDDKHSYSKASTSA 180
           D EYAR+M+R DELEKEEELAAANG++S +EDE EKET N SLEKF+DDK SYS+ STSA
Sbjct: 189 DAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSA 248

Query: 181 WLREENIGSKELPDKYQQHQEASTKPSNCSGLSVQSSPREG----------TSRVRNPNS 240
           WLR+EN+ SKEL DKYQ+ QEAST PSNCSGLSVQSSP+E           + RVRNPN 
Sbjct: 249 WLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQRVRNPNP 308

Query: 241 AAKSVTFAEVNEKNQTLPPSTSEAFTGSIVERPPIIPKTSKQETETPLQPSGSQPSKPVS 297
           AAKSV FAEV EK QTLPPSTS+AFTGSI+ERPPIIPKTSKQETETPLQPSGSQPSKPVS
Sbjct: 309 AAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVS 368

[Close]

BLAST of Lcy07g012850 vs. ExPASy TrEMBL
Match: A0A6J1J6D1 (RNA polymerase II subunit 5-mediating protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111483860 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 1.1e-114
Identity = 247/307 (80.46%), Postives = 264/307 (85.99%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFGKAAFFPGRL+HTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMM+
Sbjct: 72  MVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMD 131

Query: 61  DLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEE 120
           DLKA+ASFFDATASEAAEGLVEI EEYVEEN+SEQES SGV+KQD P+  G+D+ +I EE
Sbjct: 132 DLKAEASFFDATASEAAEGLVEITEEYVEENNSEQESGSGVNKQDAPSVSGVDEARITEE 191

Query: 121 DEEYARIMSRLDELEKEEELAAANGDQS-EEDEGEKETSNLSLEKFHDDKHSYSKASTSA 180
           DEEYARIMSRLDELE+EEELAAAN +Q+ EE E EKETSN SLEK HD KHSYSKAST  
Sbjct: 192 DEEYARIMSRLDELEEEEELAAANDNQNDEEGEEEKETSNQSLEKLHDAKHSYSKASTFP 251

Query: 181 WLREENIGSKELPDKY-QQHQEASTKPSNCSGLSVQSSPREG---------TSRVRNPNS 240
             R+E+IGSKEL DKY QQ QEAST PSNCS  S QSS +           T  +RN NS
Sbjct: 252 CQRDEDIGSKELLDKYQQQQQEASTNPSNCSNFSEQSSSKGSLHGNNSSTQTRGMRNTNS 311

Query: 241 AAKSVTFAEVNEKNQTLPPSTSEAFTGSIVERPPIIPKTSKQETETPLQPSGSQPSKPVS 297
           AAKSVTFAEV EKNQTLP STSEAFTGSIVERPPI+PK SKQETETPLQPSGSQPSKPVS
Sbjct: 312 AAKSVTFAEVKEKNQTLPASTSEAFTGSIVERPPIMPKISKQETETPLQPSGSQPSKPVS 371

[Close]

BLAST of Lcy07g012850 vs. NCBI nr
Match: XP_038901192.1 (RNA polymerase II subunit 5-mediating protein homolog [Benincasa hispida] >XP_038901193.1 RNA polymerase II subunit 5-mediating protein homolog [Benincasa hispida])

HSP 1 Score: 444.1 bits (1141), Expect = 9.3e-121
Identity = 253/307 (82.41%), Postives = 271/307 (88.27%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMM+
Sbjct: 69  MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMMD 128

Query: 61  DLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEE 120
           +LKA+ASFF ATA+E+ EGLVEIKEEYVEEN SEQ+S SGV+KQD P+  G+DK KIAEE
Sbjct: 129 NLKAEASFFGATAAESEEGLVEIKEEYVEENFSEQDSGSGVNKQDVPSVSGVDKAKIAEE 188

Query: 121 DEEYARIMSRLDELEKEEELAAANGDQS-EEDEGEKETSNLSLEKFHDDKHSYSKASTSA 180
           D EYARIM+RLDELEKEEELAAANGDQS EEDE EKETS+ SLEKF+DDK SYSK STSA
Sbjct: 189 DAEYARIMARLDELEKEEELAAANGDQSDEEDEEEKETSDQSLEKFYDDKQSYSKGSTSA 248

Query: 181 WLREENIGSKELPDKYQQHQEASTKPSNCSGLSVQSSPREG----------TSRVRNPNS 240
           WL +EN+GSKEL DKYQQ +EAST  SN SGLS QSS +E           T RVRNPN 
Sbjct: 249 WLMDENVGSKELLDKYQQQREASTNSSNYSGLSEQSSSKEDVSSGKNSLSQTQRVRNPNP 308

Query: 241 AAKSVTFAEVNEKNQTLPPSTSEAFTGSIVERPPIIPKTSKQETETPLQPSGSQPSKPVS 297
           AAKSVTFAEV EKNQTLPPST+EAFTGSI+ERPPIIPKTSKQETETPLQPSGSQPSKPVS
Sbjct: 309 AAKSVTFAEVKEKNQTLPPSTTEAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVS 368

[Close]

BLAST of Lcy07g012850 vs. NCBI nr
Match: XP_016900539.1 (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cucumis melo])

HSP 1 Score: 433.7 bits (1114), Expect = 1.3e-117
Identity = 246/307 (80.13%), Postives = 266/307 (86.64%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKA M+
Sbjct: 69  MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMD 128

Query: 61  DLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEE 120
           +LKA+ASFFDATASEA EGLVEIKEEYVEEN  EQE  SGV+KQD     G+D+ KIAE 
Sbjct: 129 NLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEI 188

Query: 121 DEEYARIMSRLDELEKEEELAAANGDQS-EEDEGEKETSNLSLEKFHDDKHSYSKASTSA 180
           D EYAR+M+R DELEKEEELAAANG++S +EDE EKET N SLEKF+DDK SYS+ STSA
Sbjct: 189 DAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSA 248

Query: 181 WLREENIGSKELPDKYQQHQEASTKPSNCSGLSVQSSPREG----------TSRVRNPNS 240
           WLR+EN+ SKEL DKYQ+ QEAST PSNCSGLSVQSSP+E           + RVRNPN 
Sbjct: 249 WLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQRVRNPNP 308

Query: 241 AAKSVTFAEVNEKNQTLPPSTSEAFTGSIVERPPIIPKTSKQETETPLQPSGSQPSKPVS 297
           AAKSV FAEV EK QTLPPSTS+AFTGSI+ERPPIIPKTSKQETETPLQPSGSQPSKPVS
Sbjct: 309 AAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVS 368

[Close]

BLAST of Lcy07g012850 vs. NCBI nr
Match: TYK04987.1 (RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 433.7 bits (1114), Expect = 1.3e-117
Identity = 246/307 (80.13%), Postives = 266/307 (86.64%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKA M+
Sbjct: 142 MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMD 201

Query: 61  DLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEE 120
           +LKA+ASFFDATASEA EGLVEIKEEYVEEN  EQE  SGV+KQD     G+D+ KIAE 
Sbjct: 202 NLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGVDEAKIAEI 261

Query: 121 DEEYARIMSRLDELEKEEELAAANGDQS-EEDEGEKETSNLSLEKFHDDKHSYSKASTSA 180
           D EYAR+M+R DELEKEEELAAANG++S +EDE EKET N SLEKF+DDK SYS+ STSA
Sbjct: 262 DAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSA 321

Query: 181 WLREENIGSKELPDKYQQHQEASTKPSNCSGLSVQSSPREG----------TSRVRNPNS 240
           WLR+EN+ SKEL DKYQ+ QEAST PSNCSGLSVQSSP+E           + RVRNPN 
Sbjct: 322 WLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQRVRNPNP 381

Query: 241 AAKSVTFAEVNEKNQTLPPSTSEAFTGSIVERPPIIPKTSKQETETPLQPSGSQPSKPVS 297
           AAKSV FAEV EK QTLPPSTS+AFTGSI+ERPPIIPKTSKQETETPLQPSGSQPSKPVS
Sbjct: 382 AAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVS 441

[Close]

BLAST of Lcy07g012850 vs. NCBI nr
Match: KAA0062034.1 (RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 430.6 bits (1106), Expect = 1.1e-116
Identity = 245/307 (79.80%), Postives = 265/307 (86.32%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKA M+
Sbjct: 69  MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMD 128

Query: 61  DLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEE 120
           +LKA+ASFFDATASEA EGLVEIKEEYVEEN  EQE  S V+KQD     G+D+ KIAE 
Sbjct: 129 NLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSEVNKQDVTRVSGVDEAKIAEI 188

Query: 121 DEEYARIMSRLDELEKEEELAAANGDQS-EEDEGEKETSNLSLEKFHDDKHSYSKASTSA 180
           D EYAR+M+R DELEKEEELAAANG++S +EDE EKET N SLEKF+DDK SYS+ STSA
Sbjct: 189 DAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSA 248

Query: 181 WLREENIGSKELPDKYQQHQEASTKPSNCSGLSVQSSPREG----------TSRVRNPNS 240
           WLR+EN+ SKEL DKYQ+ QEAST PSNCSGLSVQSSP+E           + RVRNPN 
Sbjct: 249 WLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQRVRNPNP 308

Query: 241 AAKSVTFAEVNEKNQTLPPSTSEAFTGSIVERPPIIPKTSKQETETPLQPSGSQPSKPVS 297
           AAKSV FAEV EK QTLPPSTS+AFTGSI+ERPPIIPKTSKQETETPLQPSGSQPSKPVS
Sbjct: 309 AAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVS 368

[Close]

BLAST of Lcy07g012850 vs. NCBI nr
Match: XP_008448308.1 (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cucumis melo])

HSP 1 Score: 426.8 bits (1096), Expect = 1.5e-115
Identity = 245/307 (79.80%), Postives = 265/307 (86.32%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKA M+
Sbjct: 69  MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKATMD 128

Query: 61  DLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEE 120
           +LKA+ASFFDATASEA EGLVEIKEEYVEEN  EQE  S V+KQD     G+D+ KIAE 
Sbjct: 129 NLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS-VNKQDVTRVSGVDEAKIAEI 188

Query: 121 DEEYARIMSRLDELEKEEELAAANGDQS-EEDEGEKETSNLSLEKFHDDKHSYSKASTSA 180
           D EYAR+M+R DELEKEEELAAANG++S +EDE EKET N SLEKF+DDK SYS+ STSA
Sbjct: 189 DAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQSYSEGSTSA 248

Query: 181 WLREENIGSKELPDKYQQHQEASTKPSNCSGLSVQSSPREG----------TSRVRNPNS 240
           WLR+EN+ SKEL DKYQ+ QEAST PSNCSGLSVQSSP+E           + RVRNPN 
Sbjct: 249 WLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQSQRVRNPNP 308

Query: 241 AAKSVTFAEVNEKNQTLPPSTSEAFTGSIVERPPIIPKTSKQETETPLQPSGSQPSKPVS 297
           AAKSV FAEV EK QTLPPSTS+AFTGSI+ERPPIIPKTSKQETETPLQPSGSQPSKPVS
Sbjct: 309 AAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSGSQPSKPVS 368

[Close]

BLAST of Lcy07g012850 vs. TAIR 10
Match: AT1G03760.1 (Prefoldin chaperone subunit family protein )

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-41
Identity = 139/334 (41.62%), Postives = 179/334 (53.59%), Query Frame = 0


Query: 1   MVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQVDSLKAMME 60
           MVPFGK AFFPGRLIHTNE LVLLGE YY +R+SKQTV+ LKRR K L SQ+ SLKA +E
Sbjct: 66  MVPFGKMAFFPGRLIHTNECLVLLGENYYTDRSSKQTVDFLKRRDKTLQSQIHSLKAEIE 125

Query: 61  DLKAQASFFDATASEAAEGLVEIKEEYVEENSSEQESESGVHKQDDPNDPGIDKEKIAEE 120
           DL+ +ASFF  TASE A+GLVEI+EEYVEE+SS         K+      G + E+   E
Sbjct: 126 DLQTEASFFTTTASEVADGLVEIREEYVEEDSSAPVVIHSSEKEPCNLSEG-ETEEGELE 185

Query: 121 DEEYARIMSRLDELEKEEELAAANGDQSEEDEGEKETSNLSLEKFHDD------------ 180
           D+++ARIM+RL+ELE EEEL   +GD   ED    ++S  S+E+   D            
Sbjct: 186 DDDFARIMARLNELEIEEELEGEDGDSRGED---PDSSVESVEQIQHDLVKGSRGETDRG 245

Query: 181 KHSYSKASTSAWLREENIGSKELPDKYQQHQEAS--------------TKPSNCSGLSVQ 240
           +  Y K  T+  +  +  G    P   +   EA                 P N      Q
Sbjct: 246 RVEYGKQETTISVPNKASGHSSSPRVSEPRVEAKIIQVLPETHPHKDLDDPLNRIRPMAQ 305

Query: 241 SSPREGTSRVRNPNSAAKSVTFAEVNEKNQTLPP------------STSEAFTGSIVERP 297
              +EG SR   P   A++      N K   L P             +++AFTGSIVE  
Sbjct: 306 YLSKEGQSRGGTPQQNAETWKDFRTNAKTNVLGPQKIEPQKPEPEFDSTKAFTGSIVEHA 365

The following BLAST results are available for this feature:

BLAST of Lcy07g012850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54HG4	3.9e-13	30.40	RNA polymerase II subunit 5-mediating protein homolog OS=Dictyostelium discoideu...	[more]
O94763	6.3e-11	31.63	Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens OX=9606 GN=URI1 PE=1 ...	[more]
Q3B7M7	2.6e-09	29.80	Unconventional prefoldin RPB5 interactor OS=Bos taurus OX=9913 GN=URI1 PE=2 SV=1	[more]
Q3TLD5	1.0e-08	31.64	Unconventional prefoldin RPB5 interactor OS=Mus musculus OX=10090 GN=Uri1 PE=1 S...	[more]

BLAST of Lcy07g012850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BZL3	6.1e-118	80.13	RNA polymerase II subunit 5-mediating protein-like protein isoform X1 OS=Cucumis...	[more]
A0A1S4DX32	6.1e-118	80.13	RNA polymerase II subunit 5-mediating protein homolog isoform X1 OS=Cucumis melo...	[more]
A0A5A7V404	5.2e-117	79.80	RNA polymerase II subunit 5-mediating protein-like protein isoform X1 OS=Cucumis...	[more]
A0A1S3BK98	7.5e-116	79.80	RNA polymerase II subunit 5-mediating protein homolog isoform X2 OS=Cucumis melo...	[more]
A0A6J1J6D1	1.1e-114	80.46	RNA polymerase II subunit 5-mediating protein homolog OS=Cucurbita maxima OX=366...	[more]

BLAST of Lcy07g012850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901192.1	9.3e-121	82.41	RNA polymerase II subunit 5-mediating protein homolog [Benincasa hispida] >XP_03...	[more]
XP_016900539.1	1.3e-117	80.13	PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cuc...	[more]
TYK04987.1	1.3e-117	80.13	RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis m...	[more]
KAA0062034.1	1.1e-116	79.80	RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis m...	[more]
XP_008448308.1	1.5e-115	79.80	PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cuc...	[more]

BLAST of Lcy07g012850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03760.1	1.2e-41	41.62	Prefoldin chaperone subunit family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 117..151
None	No IPR available	COILS	Coil	Coil	coord: 45..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..143
None	No IPR available	PANTHER	PTHR15111	RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3	coord: 1..296
None	No IPR available	PANTHER	PTHR15111:SF0	UNCONVENTIONAL PREFOLDIN RPB5 INTERACTOR 1	coord: 1..296
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 1..70
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 1..79 e-value: 8.2E-17 score: 63.4
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 1..76 e-value: 1.9E-16 score: 60.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g012850.1	Lcy07g012850.1	mRNA