Lcy07g012670 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g012670
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	tetraspanin-19
Location	Chr07: 41811117 .. 41813298 (-)
RNA-Seq Expression	Lcy07g012670
Synteny	Lcy07g012670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTCGTCGGGCCAATTGTGTAATTGGCAACAAATGTTTAGGGTGTTAAGGGCCTGCACGCAATCTTTGTTGAAGTTCGTCAATTCTGGAAATGGGATGGTCGGAATCGCCATGATTTTGTATGGAATTTGGTTGATGAGGGCTTGGCAGAGGCATTTGGGCCATTTGCCCTTTGAAAGACCCGATGACCCAATTCCATGGTATTGCTTTCTGGCTCTTATGCAGACTTGTATAATTTGGGATCTCCTTACCTTTTCTGGGTCTCTTTTTGTTTGTTAATATAATCTTGGAGGGATGAGGCTGAGTATTGAGATCTGAAACGGTTCTCCTAGAAGATAACTTCAGCTCGAACAATGTAGAGCATCATGAAATTGTAGTTTGATGATTTCTATATATCCTCCTGCAGGGTTTTGGTCCCTAAAATCTTTCCGGACTAGAAATGCTGCTGTTTCTTTTGTTTGGGGTAGGGACTTGGAGGGGTAGACTTTAAGTTTATTGTGCAAATTTGGAAGTCTGAATTTGCTCTCTTATTTCTGCTTGCCCTTAGTAATTTCTCTCTAAATGGGCCTGTGTCTGTCTGAGTATAAAAGACATTCCTTACATTATGGTAACTGTGCTCTCTTTAGGGAGCACAATCTCCAACAATGTAATGAAGTAGAGCATGTCTTTTGTATTCCATATTTCCTTCCTAAGAAAAAGGAAGAAGGAAATTCATGACCTTCAAATCTAAGTAGTGTTCATGGCTTTCACTATTGATCAGGCAAAATGTAGGAATTATCTTAATATTCCTTATTCTTTCTGCATTATGATTCTTTGTAGGGTAGCTTCTAAACCTCCATTTTTTTCCCTCAATAAAGGGGGGTAGGTTGAGATGCAAAGTTGTAAGGAGTATTATCGCAGTTAATATGGTTAAGATTTGGGTTCTGTGGCAGTTGGTTGATGTGAAGCAGTTAATATGATTCTTTGATCTTTGTTTAAATTTCAGGTTCATGTACAGTTTTTTTGGCCTGGGCATTTTTTTATGTGTGATCACATGCTTGGGTCATATTGCTGCTGAAACTGCTAATGGTTGTTGCCTTCATATGGTACTGCCTTCTTAATTGATTAAATGATATGTATCTCCCCTTCCCCATTTTTTCCCCTTTCTCAATAGATTACTTGACATATGAGTCTGTTTGTCCTTCAATGGATACAGTATATGGTGCTTGTCTTTGTGGTTCTGATGGTGGAGGCTGGGCTGGCGACTGATGTATTTCTGAATCGTGACTGGGAGGAGGTGAAGATTTTTATATATTCAAGCGCTCGTGTATCTTTAAAGTTAAAATGATATCATCAATGCAATTGGCTGCTAACAGATATTCATACCTCTAGTTGATTTCTTTTAACTTTACACCAGGACTTTCCAGAGGATCCAAGTGGAAGTTTTGATCAGTTCATACATTTCATCAGATTGAACTTCAATATCTGCAAATGGATAGGGATCTCAGTGGTGTCTGTTCAGGTCTCTCTCTATATTCTATGTTGACCTGTCTTAAGGCGTAGGGATTCCTTCTGACGAACTTGTAATGTTGATTCGCTTGTCTCAGAGCTTGTCTCTCTTCTTGGCAATGGTATTAAAAGCAACTGGATCGCGTCGATATTATGACAGCGATGATGAGTATGGTCCTGAGAGGCTTCCACTTCTTAAGAATGCTCTTCATCCACCACCTACATTTGTTGTTGGGGACCCTGTCTTTCCATCTAAAAATGATGCATGGAACAAACAAACTGACGACGGGGTATAAATACACAATCATTTACATTCATTTGCTCTCATTTCTGCTATGATATTTTGTCATTAGAACAACTTTTACTGCTGATTTCCCATTCTGGAAGTGATTTTCATTTTGTCTAAACTGATCAGAGCTGTTCGTTCATCCATCTTGAGTGTGTTGTTAGATGCTAGTACATTCAAGATATCAATTTCCACCATTTTCTTATTTCAGCCCAAGTTGAGTGTGTTGATCAGAGCTGTTCATTCATCCATCTTGAGTGTGTTGTTAGATGCTAGTACATTCAAGATATCAATTTCCACCATTTTCTTATTTCAGCCCAAGTTGTTGAGCATATTGATTACCCTGTTCGTGCCATAAAAACTATATCTACAAAATTGATCCGATTTCTTTGACCTTTGCAGTAA

mRNA sequence

ATGTATTCGTCGGGCCAATTGTGTAATTGGCAACAAATGTTTAGGGTGTTAAGGGCCTGCACGCAATCTTTGTTGAAGTTCGTCAATTCTGGAAATGGGATGGTCGGAATCGCCATGATTTTGTATGGAATTTGGTTGATGAGGGCTTGGCAGAGGCATTTGGGCCATTTGCCCTTTGAAAGACCCGATGACCCAATTCCATGGTTCATGTACAGTTTTTTTGGCCTGGGCATTTTTTTATGTGTGATCACATGCTTGGGTCATATTGCTGCTGAAACTGCTAATGGTTGTTGCCTTCATATGTATATGGTGCTTGTCTTTGTGGTTCTGATGGTGGAGGCTGGGCTGGCGACTGATGTATTTCTGAATCGTGACTGGGAGGAGGACTTTCCAGAGGATCCAAGTGGAAGTTTTGATCAGTTCATACATTTCATCAGATTGAACTTCAATATCTGCAAATGGATAGGGATCTCAGTGGTGTCTGTTCAGAGCTTGTCTCTCTTCTTGGCAATGGTATTAAAAGCAACTGGATCGCGTCGATATTATGACAGCGATGATGAGTATGGTCCTGAGAGGCTTCCACTTCTTAAGAATGCTCTTCATCCACCACCTACATTTGTTGTTGGGGACCCTGTCTTTCCATCTAAAAATGATGCATGGAACAAACAAACTGACGACGGGTAA

Coding sequence (CDS)

ATGTATTCGTCGGGCCAATTGTGTAATTGGCAACAAATGTTTAGGGTGTTAAGGGCCTGCACGCAATCTTTGTTGAAGTTCGTCAATTCTGGAAATGGGATGGTCGGAATCGCCATGATTTTGTATGGAATTTGGTTGATGAGGGCTTGGCAGAGGCATTTGGGCCATTTGCCCTTTGAAAGACCCGATGACCCAATTCCATGGTTCATGTACAGTTTTTTTGGCCTGGGCATTTTTTTATGTGTGATCACATGCTTGGGTCATATTGCTGCTGAAACTGCTAATGGTTGTTGCCTTCATATGTATATGGTGCTTGTCTTTGTGGTTCTGATGGTGGAGGCTGGGCTGGCGACTGATGTATTTCTGAATCGTGACTGGGAGGAGGACTTTCCAGAGGATCCAAGTGGAAGTTTTGATCAGTTCATACATTTCATCAGATTGAACTTCAATATCTGCAAATGGATAGGGATCTCAGTGGTGTCTGTTCAGAGCTTGTCTCTCTTCTTGGCAATGGTATTAAAAGCAACTGGATCGCGTCGATATTATGACAGCGATGATGAGTATGGTCCTGAGAGGCTTCCACTTCTTAAGAATGCTCTTCATCCACCACCTACATTTGTTGTTGGGGACCCTGTCTTTCCATCTAAAAATGATGCATGGAACAAACAAACTGACGACGGGTAA

Protein sequence

MYSSGQLCNWQQMFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYSFFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPEDPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATGSRRYYDSDDEYGPERLPLLKNALHPPPTFVVGDPVFPSKNDAWNKQTDDG

Homology

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BLAST of Lcy07g012670 vs. ExPASy Swiss-Prot
Match: Q940P5 (Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.8e-73
Identity = 125/210 (59.52%), Postives = 160/210 (76.19%), Query Frame = 0


Query: 13  MFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYS 72
           M R++R+C QS+LK VNS  GMVGIAMILY +WL+R WQ  +G+LPF   D P+PWF+YS
Sbjct: 1   MVRIVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFADSDHPVPWFIYS 60

Query: 73  FFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPE 132
           F GLG  LCV+TC GHIAAET NGCCL++YM  + ++ MVE G+  D+FLNRDW++DFPE
Sbjct: 61  FLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPE 120

Query: 133 DPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATG--SRRYYDSDDEYGP 192
           DPSG+F QF  FI  NF ICKWIG+S+V VQ LS+ +AM+LKA G    R+YDSDDEY  
Sbjct: 121 DPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNV 180

Query: 193 ERLPLLKNALHPPPTFVVGDPVFPSKNDAW 221
             + LL++A  PPP +VVG+P++ +K  AW
Sbjct: 181 STVALLQDARQPPP-YVVGEPMYGAKPGAW 209

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BLAST of Lcy07g012670 vs. ExPASy Swiss-Prot
Match: Q93XY5 (Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.2e-32
Identity = 75/211 (35.55%), Postives = 109/211 (51.66%), Query Frame = 0


Query: 23  SLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLG-------------------HLPFERPD 82
           S LK +N     +G+++I+Y IW++  + RHL                      P + P 
Sbjct: 12  STLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSEPLKNPI 71

Query: 83  D-----------------------PIPWFMYSFFGLGIFLCVITCLGHIAAETANGCCLH 142
           D                       P PWF+YSF  +GI +C++T +G IAAE  NGCCL 
Sbjct: 72  DFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAINGCCLC 131

Query: 143 MYMVLVFVVLMVEAGLATDVFLNRDWEEDFPEDPSGSFDQFIHFIRLNFNICKWIGISVV 192
            Y +L  +++++EA L   + ++R WE+D P DP+G       FI  N +ICKW+GI+VV
Sbjct: 132 FYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVV 191

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BLAST of Lcy07g012670 vs. ExPASy Swiss-Prot
Match: Q9SVU4 (Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-30
Identity = 72/221 (32.58%), Postives = 108/221 (48.87%), Query Frame = 0


Query: 23  SLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERP-------------------- 82
           S+LK +N     +GI++I+Y IW++  +     H+P + P                    
Sbjct: 12  SILKILNFLQAFIGISIIIYSIWMLDQYNH---HVPVDPPPSQPPAASSPDSSYSFSNSI 71

Query: 83  ------------------------------------DDPIPWFMYSFFGLGIFLCVITCL 142
                                               D P PWF+Y F  +GI +C++T +
Sbjct: 72  IEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIVTII 131

Query: 143 GHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPEDPSGSFDQFIHFIR 188
           G IAAE  NGCCL  Y +L  +++++EA L   + ++R WE+D P DP+G  +    FI 
Sbjct: 132 GFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIE 191

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BLAST of Lcy07g012670 vs. ExPASy Swiss-Prot
Match: Q9C5W7 (Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.7e-29
Identity = 71/236 (30.08%), Postives = 120/236 (50.85%), Query Frame = 0


Query: 18  RACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQR-------------HLGHLPFERP-- 77
           R C + LLK +N    + G+ MI YGI+L   ++R                ++ F RP  
Sbjct: 4   RGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGRPIL 63

Query: 78  -----------DDPIPWFMYSFFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLM 137
                      + P  WF+Y F G+G+ L VI+C G +   + + CCL  Y +L+ ++++
Sbjct: 64  MAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLIL 123

Query: 138 VEAGLATDVFLNRDWEEDFPEDPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAM 197
           VE G A  +F +  W ++ P D +G+FD   +F+R N+ I +W+ +  V  ++L   LA+
Sbjct: 124 VELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLAL 183

Query: 198 VLKATGSRRYYDSDDEYGPERLPLLKNALHPPPTFVVGDPVF------PSKNDAWN 222
           +++A  +   YDSDDEY   R  + +  ++     V G PV       PS++D W+
Sbjct: 184 MVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWS 239

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BLAST of Lcy07g012670 vs. ExPASy TrEMBL
Match: A0A6J1HZX7 (tetraspanin-19 OS=Cucurbita maxima OX=3661 GN=LOC111469621 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.8e-107
Identity = 183/214 (85.51%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 13  MFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYS 72
           M R++RAC QSLLKFVNSGNG+VGIAMILYGIWLMRAWQRHLGH PFERPDDPIPWFMYS
Sbjct: 1   MVRMIRACMQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYS 60

Query: 73  FFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPE 132
           FFGLGI LCVITC+GHIAAETA GCCLH+Y++LVFVVLMVEAGLATDVFLNRDWEEDFP 
Sbjct: 61  FFGLGILLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPV 120

Query: 133 DPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATGSRRYYDSDDEYGPER 192
           DPSGSFDQF  FIRLNF+IC+WIGIS++S+Q LSL LAM+LKA GSRRYYDSDD+Y PER
Sbjct: 121 DPSGSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPER 180

Query: 193 LPLLKNALHPPPTFVVGDPVFPSKNDAWNKQTDD 227
           LPLLKNALH P T V+GDPVFPSKNDAWNK+TDD
Sbjct: 181 LPLLKNALHSPSTCVIGDPVFPSKNDAWNKRTDD 214

[Close]

BLAST of Lcy07g012670 vs. ExPASy TrEMBL
Match: A0A6J1G704 (tetraspanin-19 OS=Cucurbita moschata OX=3662 GN=LOC111451441 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.8e-107
Identity = 183/214 (85.51%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 13  MFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYS 72
           M R++RAC QSLLKFVNSGNG+VGIAMILYGIWLMRAWQRHLGH PFERPDDPIPWFMYS
Sbjct: 1   MVRMIRACIQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYS 60

Query: 73  FFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPE 132
           FFGLGI LCVITC+GHIAAETA GCCLH+Y++LVFVVLMVEAGLATDVFLNRDWEEDFP 
Sbjct: 61  FFGLGILLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPM 120

Query: 133 DPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATGSRRYYDSDDEYGPER 192
           DPSGSFDQF  FIRLNF+IC+WIGIS++S+Q LSL LAM+LKA GSRRYYDSDD+Y PER
Sbjct: 121 DPSGSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPER 180

Query: 193 LPLLKNALHPPPTFVVGDPVFPSKNDAWNKQTDD 227
           LPLLKNALH P T V+GDPVFPSKNDAWNK+TDD
Sbjct: 181 LPLLKNALHSPSTCVIGDPVFPSKNDAWNKRTDD 214

[Close]

BLAST of Lcy07g012670 vs. ExPASy TrEMBL
Match: A0A5D3C188 (Tetraspanin-19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001560 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.5e-105
Identity = 179/214 (83.64%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 13  MFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYS 72
           M R+LRAC QSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLP+E P DPIPWFMYS
Sbjct: 1   MVRILRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPYEGPSDPIPWFMYS 60

Query: 73  FFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPE 132
           F GLGI LCVITCLGHIAAETANGCCLH+YM+L+F+V+MVEAG+ TDVFLNRDW EDFP+
Sbjct: 61  FLGLGILLCVITCLGHIAAETANGCCLHLYMLLLFMVIMVEAGVTTDVFLNRDWAEDFPK 120

Query: 133 DPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATGSRRYYDSDDEYGPER 192
           DPSG FDQF HFI+ NFNICKWIGIS VS+Q LSL LAMVLKA GSRRYY+SDDEY PER
Sbjct: 121 DPSGCFDQFKHFIKSNFNICKWIGISTVSIQGLSLLLAMVLKAIGSRRYYESDDEYAPER 180

Query: 193 LPLLKNALHPPPTFVVGDPVFPSKNDAWNKQTDD 227
           LP LKNALH P T V+GDPVFPSKND WNK+TDD
Sbjct: 181 LPFLKNALHSPTTCVIGDPVFPSKNDTWNKRTDD 214

[Close]

BLAST of Lcy07g012670 vs. ExPASy TrEMBL
Match: A0A1S3BK78 (tetraspanin-19 OS=Cucumis melo OX=3656 GN=LOC103490521 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.5e-105
Identity = 179/214 (83.64%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 13  MFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYS 72
           M R+LRAC QSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLP+E P DPIPWFMYS
Sbjct: 1   MVRILRACMQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPYEGPSDPIPWFMYS 60

Query: 73  FFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPE 132
           F GLGI LCVITCLGHIAAETANGCCLH+YM+L+F+V+MVEAG+ TDVFLNRDW EDFP+
Sbjct: 61  FLGLGILLCVITCLGHIAAETANGCCLHLYMLLLFMVIMVEAGVTTDVFLNRDWAEDFPK 120

Query: 133 DPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATGSRRYYDSDDEYGPER 192
           DPSG FDQF HFI+ NFNICKWIGIS VS+Q LSL LAMVLKA GSRRYY+SDDEY PER
Sbjct: 121 DPSGCFDQFKHFIKSNFNICKWIGISTVSIQGLSLLLAMVLKAIGSRRYYESDDEYAPER 180

Query: 193 LPLLKNALHPPPTFVVGDPVFPSKNDAWNKQTDD 227
           LP LKNALH P T V+GDPVFPSKND WNK+TDD
Sbjct: 181 LPFLKNALHSPTTCVIGDPVFPSKNDTWNKRTDD 214

[Close]

BLAST of Lcy07g012670 vs. ExPASy TrEMBL
Match: A0A0A0KEA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128570 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.5e-103
Identity = 175/214 (81.78%), Postives = 191/214 (89.25%), Query Frame = 0


Query: 13  MFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYS 72
           M R+LRAC +SLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLP+E P+DPIPWF YS
Sbjct: 1   MVRMLRACIRSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPYEGPNDPIPWFTYS 60

Query: 73  FFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPE 132
           F GLGI LCVITCLGHIAAETANGCCLH+YM+L+F+V+MVEAG+ TDVFLNRDW EDFP+
Sbjct: 61  FLGLGILLCVITCLGHIAAETANGCCLHLYMLLLFMVIMVEAGVTTDVFLNRDWAEDFPK 120

Query: 133 DPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATGSRRYYDSDDEYGPER 192
           DPSG FDQF HFI+ NFNICKWIGIS VS+Q LSL LAMVLKA GSRRYY+SDDEY PER
Sbjct: 121 DPSGCFDQFKHFIKSNFNICKWIGISTVSIQGLSLLLAMVLKAIGSRRYYESDDEYAPER 180

Query: 193 LPLLKNALHPPPTFVVGDPVFPSKNDAWNKQTDD 227
           LP LKN LH P   V+GDPVFPSKND WNKQT+D
Sbjct: 181 LPFLKNTLHSPTACVIGDPVFPSKNDTWNKQTED 214

[Close]

BLAST of Lcy07g012670 vs. NCBI nr
Match: XP_038902884.1 (tetraspanin-19 isoform X1 [Benincasa hispida])

HSP 1 Score: 407.9 bits (1047), Expect = 5.7e-110
Identity = 191/225 (84.89%), Postives = 204/225 (90.67%), Query Frame = 0


Query: 2   YSSGQLCNWQQMFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFER 61
           Y SGQL NWQQM R+LR C QSLLKFVNSGNGMVGIAMILYGIWL+RAWQRH GHLP+  
Sbjct: 66  YLSGQLSNWQQMVRMLRICMQSLLKFVNSGNGMVGIAMILYGIWLIRAWQRHFGHLPY-G 125

Query: 62  PDDPIPWFMYSFFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVF 121
           P DPIPWFMYSFFGLGI LCVITCLGHIAAETANGCCLH+YMVLVF+VLMVEAG+ TDVF
Sbjct: 126 PSDPIPWFMYSFFGLGILLCVITCLGHIAAETANGCCLHLYMVLVFMVLMVEAGVTTDVF 185

Query: 122 LNRDWEEDFPEDPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATGSRRY 181
           LNRDWEEDFP+DPSGSFDQF HFI+LNF+ICKWIGIS+VS+Q LSL LAMVLKA GSRRY
Sbjct: 186 LNRDWEEDFPKDPSGSFDQFKHFIKLNFDICKWIGISMVSIQGLSLLLAMVLKAIGSRRY 245

Query: 182 YDSDDEYGPERLPLLKNALHPPPTFVVGDPVFPSKNDAWNKQTDD 227
           YDSDDEY  ERLPLLKNALH P T V+GDPVFPSKND WNK+TDD
Sbjct: 246 YDSDDEYASERLPLLKNALHSPTTCVIGDPVFPSKNDTWNKRTDD 289

[Close]

BLAST of Lcy07g012670 vs. NCBI nr
Match: XP_022947641.1 (tetraspanin-19 [Cucurbita moschata])

HSP 1 Score: 397.1 bits (1019), Expect = 1.0e-106
Identity = 183/214 (85.51%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 13  MFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYS 72
           M R++RAC QSLLKFVNSGNG+VGIAMILYGIWLMRAWQRHLGH PFERPDDPIPWFMYS
Sbjct: 1   MVRMIRACIQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYS 60

Query: 73  FFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPE 132
           FFGLGI LCVITC+GHIAAETA GCCLH+Y++LVFVVLMVEAGLATDVFLNRDWEEDFP 
Sbjct: 61  FFGLGILLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPM 120

Query: 133 DPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATGSRRYYDSDDEYGPER 192
           DPSGSFDQF  FIRLNF+IC+WIGIS++S+Q LSL LAM+LKA GSRRYYDSDD+Y PER
Sbjct: 121 DPSGSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPER 180

Query: 193 LPLLKNALHPPPTFVVGDPVFPSKNDAWNKQTDD 227
           LPLLKNALH P T V+GDPVFPSKNDAWNK+TDD
Sbjct: 181 LPLLKNALHSPSTCVIGDPVFPSKNDAWNKRTDD 214

[Close]

BLAST of Lcy07g012670 vs. NCBI nr
Match: XP_022970722.1 (tetraspanin-19 [Cucurbita maxima])

HSP 1 Score: 397.1 bits (1019), Expect = 1.0e-106
Identity = 183/214 (85.51%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 13  MFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYS 72
           M R++RAC QSLLKFVNSGNG+VGIAMILYGIWLMRAWQRHLGH PFERPDDPIPWFMYS
Sbjct: 1   MVRMIRACMQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYS 60

Query: 73  FFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPE 132
           FFGLGI LCVITC+GHIAAETA GCCLH+Y++LVFVVLMVEAGLATDVFLNRDWEEDFP 
Sbjct: 61  FFGLGILLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPV 120

Query: 133 DPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATGSRRYYDSDDEYGPER 192
           DPSGSFDQF  FIRLNF+IC+WIGIS++S+Q LSL LAM+LKA GSRRYYDSDD+Y PER
Sbjct: 121 DPSGSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPER 180

Query: 193 LPLLKNALHPPPTFVVGDPVFPSKNDAWNKQTDD 227
           LPLLKNALH P T V+GDPVFPSKNDAWNK+TDD
Sbjct: 181 LPLLKNALHSPSTCVIGDPVFPSKNDAWNKRTDD 214

[Close]

BLAST of Lcy07g012670 vs. NCBI nr
Match: KAG6604798.1 (Tetraspanin-19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 182/214 (85.05%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 13  MFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYS 72
           M R++RAC QSLLKFVNSGNG+VGIAMILYGIWLMRAWQRHLGH PFERPDDPIPWFMYS
Sbjct: 1   MVRMIRACIQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYS 60

Query: 73  FFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPE 132
           FFGLG+ LCVITC+GHIAAETA GCCLH+Y++LVFVVLMVEAGLATDVFLNRDWEEDFP 
Sbjct: 61  FFGLGVLLCVITCVGHIAAETARGCCLHLYVMLVFVVLMVEAGLATDVFLNRDWEEDFPM 120

Query: 133 DPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATGSRRYYDSDDEYGPER 192
           DPSGSFDQF  FIRLNF+IC+WIGIS++S+Q LSL LAM+LKA GSRRYYDSDD+Y PER
Sbjct: 121 DPSGSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPER 180

Query: 193 LPLLKNALHPPPTFVVGDPVFPSKNDAWNKQTDD 227
           LPLLKNALH P T V+GDPVFPSKNDAWNK+TDD
Sbjct: 181 LPLLKNALHSPSTCVIGDPVFPSKNDAWNKRTDD 214

[Close]

BLAST of Lcy07g012670 vs. NCBI nr
Match: XP_023534181.1 (tetraspanin-19 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.6 bits (1015), Expect = 2.9e-106
Identity = 182/214 (85.05%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 13  MFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYS 72
           M R++RAC QSLLKFVNSGNG+VGIAMILYGIWLMRAWQRHLGH PFERPDDPIPWFMYS
Sbjct: 1   MVRMIRACIQSLLKFVNSGNGLVGIAMILYGIWLMRAWQRHLGHFPFERPDDPIPWFMYS 60

Query: 73  FFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPE 132
           FFG+GI LCVITC+GHIAAETA GCCLH+Y++LVFVVLMVEAGLATDVFLNRDWEEDFP 
Sbjct: 61  FFGVGILLCVITCVGHIAAETARGCCLHIYVMLVFVVLMVEAGLATDVFLNRDWEEDFPM 120

Query: 133 DPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATGSRRYYDSDDEYGPER 192
           DPSGSFDQF  FIRLNF+IC+WIGIS++S+Q LSL LAM+LKA GSRRYYDSDD+Y PER
Sbjct: 121 DPSGSFDQFKQFIRLNFDICQWIGISMMSIQGLSLLLAMLLKAIGSRRYYDSDDDYAPER 180

Query: 193 LPLLKNALHPPPTFVVGDPVFPSKNDAWNKQTDD 227
           LPLLKNALH P T V+GDPVFPSKNDAWNK+TDD
Sbjct: 181 LPLLKNALHSPSTCVIGDPVFPSKNDAWNKRTDD 214

[Close]

BLAST of Lcy07g012670 vs. TAIR 10
Match: AT2G20740.1 (Tetraspanin family protein )

HSP 1 Score: 275.4 bits (703), Expect = 4.1e-74
Identity = 125/210 (59.52%), Postives = 160/210 (76.19%), Query Frame = 0


Query: 13  MFRVLRACTQSLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERPDDPIPWFMYS 72
           M R++R+C QS+LK VNS  GMVGIAMILY +WL+R WQ  +G+LPF   D P+PWF+YS
Sbjct: 1   MVRIVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFADSDHPVPWFIYS 60

Query: 73  FFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPE 132
           F GLG  LCV+TC GHIAAET NGCCL++YM  + ++ MVE G+  D+FLNRDW++DFPE
Sbjct: 61  FLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPE 120

Query: 133 DPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVLKATG--SRRYYDSDDEYGP 192
           DPSG+F QF  FI  NF ICKWIG+S+V VQ LS+ +AM+LKA G    R+YDSDDEY  
Sbjct: 121 DPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNV 180

Query: 193 ERLPLLKNALHPPPTFVVGDPVFPSKNDAW 221
             + LL++A  PPP +VVG+P++ +K  AW
Sbjct: 181 STVALLQDARQPPP-YVVGEPMYGAKPGAW 209

[Close]

BLAST of Lcy07g012670 vs. TAIR 10
Match: AT2G20740.2 (Tetraspanin family protein )

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-57
Identity = 99/169 (58.58%), Postives = 128/169 (75.74%), Query Frame = 0


Query: 54  LGHLPFERPDDPIPWFMYSFFGLGIFLCVITCLGHIAAETANGCCLHMYMVLVFVVLMVE 113
           +G+LPF   D P+PWF+YSF GLG  LCV+TC GHIAAET NGCCL++YM  + ++ MVE
Sbjct: 1   MGNLPFADSDHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVE 60

Query: 114 AGLATDVFLNRDWEEDFPEDPSGSFDQFIHFIRLNFNICKWIGISVVSVQSLSLFLAMVL 173
            G+  D+FLNRDW++DFPEDPSG+F QF  FI  NF ICKWIG+S+V VQ LS+ +AM+L
Sbjct: 61  GGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLL 120

Query: 174 KATG--SRRYYDSDDEYGPERLPLLKNALHPPPTFVVGDPVFPSKNDAW 221
           KA G    R+YDSDDEY    + LL++A  PPP +VVG+P++ +K  AW
Sbjct: 121 KALGPHPHRHYDSDDEYNVSTVALLQDARQPPP-YVVGEPMYGAKPGAW 168

[Close]

BLAST of Lcy07g012670 vs. TAIR 10
Match: AT2G20230.1 (Tetraspanin family protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33
Identity = 75/211 (35.55%), Postives = 109/211 (51.66%), Query Frame = 0


Query: 23  SLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLG-------------------HLPFERPD 82
           S LK +N     +G+++I+Y IW++  + RHL                      P + P 
Sbjct: 12  STLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSEPLKNPI 71

Query: 83  D-----------------------PIPWFMYSFFGLGIFLCVITCLGHIAAETANGCCLH 142
           D                       P PWF+YSF  +GI +C++T +G IAAE  NGCCL 
Sbjct: 72  DFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAINGCCLC 131

Query: 143 MYMVLVFVVLMVEAGLATDVFLNRDWEEDFPEDPSGSFDQFIHFIRLNFNICKWIGISVV 192
            Y +L  +++++EA L   + ++R WE+D P DP+G       FI  N +ICKW+GI+VV
Sbjct: 132 FYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVV 191

[Close]

BLAST of Lcy07g012670 vs. TAIR 10
Match: AT2G20740.3 (Tetraspanin family protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33
Identity = 66/120 (55.00%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 103 MVLVFVVLMVEAGLATDVFLNRDWEEDFPEDPSGSFDQFIHFIRLNFNICKWIGISVVSV 162
           M  + ++ MVE G+  D+FLNRDW++DFPEDPSG+F QF  FI  NF ICKWIG+S+V V
Sbjct: 1   MGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCV 60

Query: 163 QSLSLFLAMVLKATG--SRRYYDSDDEYGPERLPLLKNALHPPPTFVVGDPVFPSKNDAW 221
           Q LS+ +AM+LKA G    R+YDSDDEY    + LL++A  PPP +VVG+P++ +K  AW
Sbjct: 61  QGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQDARQPPP-YVVGEPMYGAKPGAW 119

[Close]

BLAST of Lcy07g012670 vs. TAIR 10
Match: AT4G28770.1 (Tetraspanin family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-31
Identity = 72/221 (32.58%), Postives = 108/221 (48.87%), Query Frame = 0


Query: 23  SLLKFVNSGNGMVGIAMILYGIWLMRAWQRHLGHLPFERP-------------------- 82
           S+LK +N     +GI++I+Y IW++  +     H+P + P                    
Sbjct: 12  SILKILNFLQAFIGISIIIYSIWMLDQYNH---HVPVDPPPSQPPAASSPDSSYSFSNSI 71

Query: 83  ------------------------------------DDPIPWFMYSFFGLGIFLCVITCL 142
                                               D P PWF+Y F  +GI +C++T +
Sbjct: 72  IEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIVTII 131

Query: 143 GHIAAETANGCCLHMYMVLVFVVLMVEAGLATDVFLNRDWEEDFPEDPSGSFDQFIHFIR 188
           G IAAE  NGCCL  Y +L  +++++EA L   + ++R WE+D P DP+G  +    FI 
Sbjct: 132 GFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLRAFIE 191

The following BLAST results are available for this feature:

BLAST of Lcy07g012670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940P5	5.8e-73	59.52	Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1	[more]
Q93XY5	2.2e-32	35.55	Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1	[more]
Q9SVU4	3.5e-30	32.58	Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1	[more]
Q9C5W7	8.7e-29	30.08	Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A P...	[more]

BLAST of Lcy07g012670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZX7	4.8e-107	85.51	tetraspanin-19 OS=Cucurbita maxima OX=3661 GN=LOC111469621 PE=4 SV=1	[more]
A0A6J1G704	4.8e-107	85.51	tetraspanin-19 OS=Cucurbita moschata OX=3662 GN=LOC111451441 PE=4 SV=1	[more]
A0A5D3C188	4.5e-105	83.64	Tetraspanin-19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00156...	[more]
A0A1S3BK78	4.5e-105	83.64	tetraspanin-19 OS=Cucumis melo OX=3656 GN=LOC103490521 PE=4 SV=1	[more]
A0A0A0KEA2	9.5e-103	81.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128570 PE=4 SV=1	[more]

BLAST of Lcy07g012670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902884.1	5.7e-110	84.89	tetraspanin-19 isoform X1 [Benincasa hispida]	[more]
XP_022947641.1	1.0e-106	85.51	tetraspanin-19 [Cucurbita moschata]	[more]
XP_022970722.1	1.0e-106	85.51	tetraspanin-19 [Cucurbita maxima]	[more]
KAG6604798.1	1.3e-106	85.05	Tetraspanin-19, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023534181.1	2.9e-106	85.05	tetraspanin-19 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy07g012670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20740.1	4.1e-74	59.52	Tetraspanin family protein	[more]
AT2G20740.2	1.2e-57	58.58	Tetraspanin family protein	[more]
AT2G20230.1	1.6e-33	35.55	Tetraspanin family protein	[more]
AT2G20740.3	1.6e-33	55.00	Tetraspanin family protein	[more]
AT4G28770.1	2.5e-31	32.58	Tetraspanin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 24..126 e-value: 1.8E-10 score: 40.9
None	No IPR available	PANTHER	PTHR19282:SF158	TETRASPANIN-19	coord: 16..203
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 16..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g012670.1	Lcy07g012670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane