![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Lcy07g011790 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACACTGGCCGCAGTCTCTGTTTCTCAATTTCCCTCCACTACGTTCCCGCCTCTCTCTCGGGCCCCGAATTTCAATAGCCATTAAACCCTAACGAATCGCCGATCTCCTTCGGTCTTCTTCAATTGATCAACTCCGATTCTTAACTATGAATCGCAGGCTTCGATTCTCGCCAAAATCATCTGCAAATCGGACGGAACCATTCCACAAGTACTTGAAGCCCGGCGCCTTAGCGCAGTTGCGAGACTCGAGAATCAGCGCTAGATCGTACAGATTCAACTCTCTCGCTCAGATCTACCTCCGCCGTACTTCTCCTCTGGAATCGTCTCCACTTTCCACTACCGCTCAATCGGAGATTGACATGGTCGACGACTTCCCTTCAATGGCTGGGAGGGTTTATAGTAGGCCCTTGAGCCTTAAGAGGAAGAAGCTCGCAGCGATTAAGTCTACATGGTTTCCAAGCCCTAATTTGCAGACTCCAACTCCCGATTTAACTCGAGACCCGATTATTGATGTGTTTAATAGCGATGTTGCTGCGCATTGAGTGCAAATTATCATACTACAGTGAATTGACCTTTTATTTTACTGTTATTTCTGTAAGTAGTTTGTCAACGGCTGAGTAGTTTGTTGCTGACTGTTTCTTTCGATTTTATTATAGGTAGAATTCTTTTCAAGTGGCTGATTTTGAATAATTATAGTGGAAAGTTTTATTGTGAGACATCGAAC AACACTGGCCGCAGTCTCTGTTTCTCAATTTCCCTCCACTACGTTCCCGCCTCTCTCTCGGGCCCCGAATTTCAATAGCCATTAAACCCTAACGAATCGCCGATCTCCTTCGGTCTTCTTCAATTGATCAACTCCGATTCTTAACTATGAATCGCAGGCTTCGATTCTCGCCAAAATCATCTGCAAATCGGACGGAACCATTCCACAAGTACTTGAAGCCCGGCGCCTTAGCGCAGTTGCGAGACTCGAGAATCAGCGCTAGATCGTACAGATTCAACTCTCTCGCTCAGATCTACCTCCGCCGTACTTCTCCTCTGGAATCGTCTCCACTTTCCACTACCGCTCAATCGGAGATTGACATGGTCGACGACTTCCCTTCAATGGCTGGGAGGGTTTATAGTAGGCCCTTGAGCCTTAAGAGGAAGAAGCTCGCAGCGATTAAGTCTACATGGTTTCCAAGCCCTAATTTGCAGACTCCAACTCCCGATTTAACTCGAGACCCGATTATTGATGTGTTTAATAGCGATGTTGCTGCGCATTGAGTGCAAATTATCATACTACAGTGAATTGACCTTTTATTTTACTGTTATTTCTGTAAGTAGTTTGTCAACGGCTGAGTAGTTTGTTGCTGACTGTTTCTTTCGATTTTATTATAGGTAGAATTCTTTTCAAGTGGCTGATTTTGAATAATTATAGTGGAAAGTTTTATTGTGAGACATCGAAC ATGAATCGCAGGCTTCGATTCTCGCCAAAATCATCTGCAAATCGGACGGAACCATTCCACAAGTACTTGAAGCCCGGCGCCTTAGCGCAGTTGCGAGACTCGAGAATCAGCGCTAGATCGTACAGATTCAACTCTCTCGCTCAGATCTACCTCCGCCGTACTTCTCCTCTGGAATCGTCTCCACTTTCCACTACCGCTCAATCGGAGATTGACATGGTCGACGACTTCCCTTCAATGGCTGGGAGGGTTTATAGTAGGCCCTTGAGCCTTAAGAGGAAGAAGCTCGCAGCGATTAAGTCTACATGGTTTCCAAGCCCTAATTTGCAGACTCCAACTCCCGATTTAACTCGAGACCCGATTATTGATGTGTTTAATAGCGATGTTGCTGCGCATTGA MNRRLRFSPKSSANRTEPFHKYLKPGALAQLRDSRISARSYRFNSLAQIYLRRTSPLESSPLSTTAQSEIDMVDDFPSMAGRVYSRPLSLKRKKLAAIKSTWFPSPNLQTPTPDLTRDPIIDVFNSDVAAH Homology
BLAST of Lcy07g011790 vs. ExPASy TrEMBL
Match: A0A6J1J6X7 (uncharacterized protein LOC111484017 OS=Cucurbita maxima OX=3661 GN=LOC111484017 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 6.1e-46 Identity = 100/131 (76.34%), Postives = 113/131 (86.26%), Query Frame = 0
BLAST of Lcy07g011790 vs. ExPASy TrEMBL
Match: A0A6J1FXV4 (uncharacterized protein LOC111448755 OS=Cucurbita moschata OX=3662 GN=LOC111448755 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.4e-45 Identity = 100/131 (76.34%), Postives = 112/131 (85.50%), Query Frame = 0
BLAST of Lcy07g011790 vs. ExPASy TrEMBL
Match: A0A7J6GIE5 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_015480 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 4.6e-25 Identity = 78/132 (59.09%), Postives = 92/132 (69.70%), Query Frame = 0
BLAST of Lcy07g011790 vs. ExPASy TrEMBL
Match: A0A2P5EE91 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_203870 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24 Identity = 73/131 (55.73%), Postives = 89/131 (67.94%), Query Frame = 0
BLAST of Lcy07g011790 vs. ExPASy TrEMBL
Match: A0A6P3Z351 (uncharacterized protein LOC107408961 OS=Ziziphus jujuba OX=326968 GN=LOC107408961 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 8.6e-24 Identity = 76/132 (57.58%), Postives = 90/132 (68.18%), Query Frame = 0
BLAST of Lcy07g011790 vs. NCBI nr
Match: XP_038902395.1 (uncharacterized protein LOC120089036 [Benincasa hispida]) HSP 1 Score: 209.1 bits (531), Expect = 2.2e-50 Identity = 104/131 (79.39%), Postives = 117/131 (89.31%), Query Frame = 0
BLAST of Lcy07g011790 vs. NCBI nr
Match: XP_023513131.1 (uncharacterized protein LOC111777660 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 202.2 bits (513), Expect = 2.7e-48 Identity = 105/131 (80.15%), Postives = 114/131 (87.02%), Query Frame = 0
BLAST of Lcy07g011790 vs. NCBI nr
Match: XP_022986202.1 (uncharacterized protein LOC111484017 [Cucurbita maxima]) HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45 Identity = 100/131 (76.34%), Postives = 113/131 (86.26%), Query Frame = 0
BLAST of Lcy07g011790 vs. NCBI nr
Match: XP_022944248.1 (uncharacterized protein LOC111448755 [Cucurbita moschata] >KAG6570884.1 hypothetical protein SDJN03_29799, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010732.1 hypothetical protein SDJN02_27528, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 192.2 bits (487), Expect = 2.8e-45 Identity = 100/131 (76.34%), Postives = 112/131 (85.50%), Query Frame = 0
BLAST of Lcy07g011790 vs. NCBI nr
Match: XP_030481732.1 (uncharacterized protein LOC115698726 [Cannabis sativa] >KAF4382652.1 hypothetical protein F8388_015480 [Cannabis sativa]) HSP 1 Score: 124.0 bits (310), Expect = 9.4e-25 Identity = 78/132 (59.09%), Postives = 92/132 (69.70%), Query Frame = 0
BLAST of Lcy07g011790 vs. TAIR 10
Match: AT5G54970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 5.7e-12 Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = 0
BLAST of Lcy07g011790 vs. TAIR 10
Match: AT4G26960.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54970.1); Has 22 Blast hits to 22 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 3.3e-07 Identity = 33/101 (32.67%), Postives = 49/101 (48.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|