Lcy07g010880 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g010880
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Heavy metal-associated isoprenylated plant protein 16-like
Location	Chr07: 40000219 .. 40001034 (-)
RNA-Seq Expression	Lcy07g010880
Synteny	Lcy07g010880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAACTTTTGTACGGCGTACGGACACTTTCTCTCTCTACAACATCAACAATAAAATGAAGGTACGTACAGATTCACCCAGGTTCTCAATCCAAAGAATTTTCAAACATCGTAAATAATCTTTTAGTTAGTTTTCCACTCGTCTTGTTCGTATGTGCTCCATTTTTTTTATATGTGTTTCACTTTGGCTTTTGCAGCAAAAGATAGTGGTTCGAGTGTCGATGAAGAGGGGCCCGAAGTACCGAAGCAAAGCGTTGAAGATTGCAGCATCCGTCTCGGGTAATCATACATACATGCATACATACGTACGTGATTGCGATTATTGTTTTGAGAGGATTTAATTTGGTTATGGTTTTGAAATTATAGGGAATGTTGAGAAGATTAGCTTGGAAGGCGACGATAAAGATAAAGTGGAGGTAATCGGAGATGTGGATGCGATCGAACTCACTGAATTGCTGCGGAAGGGTTTCGGTTCCGCACAGTTGGAGTCTGTAAGCGCCGTTGAAGATAAAGATAAAGACAAAGATAAAGACAAAGATAAAGATGATAAAGATAAACCTCAGATAACTTGGACTTATGGTTGGGGCGTGCCTCATCAACCGTCCTATTGTCATTGCTACCTTGATCCTTGCTCCTCCTATTCTTTTTGGTGATTTATATTCGATGAGGGCAAAATAGTGATTGTCAAATTCAAATTTGTAGGAAATCTGATTTAATTTTTTTTTTTGTTTTCATATTCCAATAGAAATGTGATGGATATATGCTTATATCTGTCATATATATAGATTTCCCTTTTCCTTTTTTTCCTGTTGATTTG

mRNA sequence

TAAAACTTTTGTACGGCGTACGGACACTTTCTCTCTCTACAACATCAACAATAAAATGAAGCAAAAGATAGTGGTTCGAGTGTCGATGAAGAGGGGCCCGAAGTACCGAAGCAAAGCGTTGAAGATTGCAGCATCCGTCTCGGGGAATGTTGAGAAGATTAGCTTGGAAGGCGACGATAAAGATAAAGTGGAGGTAATCGGAGATGTGGATGCGATCGAACTCACTGAATTGCTGCGGAAGGGTTTCGGTTCCGCACAGTTGGAGTCTGTAAGCGCCGTTGAAGATAAAGATAAAGACAAAGATAAAGACAAAGATAAAGATGATAAAGATAAACCTCAGATAACTTGGACTTATGGTTGGGGCGTGCCTCATCAACCGTCCTATTGTCATTGCTACCTTGATCCTTGCTCCTCCTATTCTTTTTGGTGATTTATATTCGATGAGGGCAAAATAGTGATTGTCAAATTCAAATTTGTAGGAAATCTGATTTAATTTTTTTTTTTGTTTTCATATTCCAATAGAAATGTGATGGATATATGCTTATATCTGTCATATATATAGATTTCCCTTTTCCTTTTTTTCCTGTTGATTTG

Coding sequence (CDS)

ATGAAGCAAAAGATAGTGGTTCGAGTGTCGATGAAGAGGGGCCCGAAGTACCGAAGCAAAGCGTTGAAGATTGCAGCATCCGTCTCGGGGAATGTTGAGAAGATTAGCTTGGAAGGCGACGATAAAGATAAAGTGGAGGTAATCGGAGATGTGGATGCGATCGAACTCACTGAATTGCTGCGGAAGGGTTTCGGTTCCGCACAGTTGGAGTCTGTAAGCGCCGTTGAAGATAAAGATAAAGACAAAGATAAAGACAAAGATAAAGATGATAAAGATAAACCTCAGATAACTTGGACTTATGGTTGGGGCGTGCCTCATCAACCGTCCTATTGTCATTGCTACCTTGATCCTTGCTCCTCCTATTCTTTTTGGTGA

Protein sequence

MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIGDVDAIELTELLRKGFGSAQLESVSAVEDKDKDKDKDKDKDDKDKPQITWTYGWGVPHQPSYCHCYLDPCSSYSFW

Homology

[Close]

BLAST of Lcy07g010880 vs. ExPASy Swiss-Prot
Match: Q5PNZ7 (Heavy metal-associated isoprenylated plant protein 46 OS=Arabidopsis thaliana OX=3702 GN=HIPP46 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.4e-04
Identity = 45/135 (33.33%), Postives = 66/135 (48.89%), Query Frame = 0


Query: 1   MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIG-DVDAIELTEL 60
           MKQKI++RV+M    K R+KA+  A    G V  + ++GD ++++EV G +VD I L ++
Sbjct: 1   MKQKILIRVTM-TDDKTRAKAMTKAVQFKG-VSAVEIKGDHRNQIEVTGVEVDMIPLIQI 60

Query: 61  LRKGFGSAQLESVSAVEDKDKDKDK-------------DKDKDDKDKPQITWTYGWGVPH 120
           LRK    A+L SV+ VE   K+ +K             D+   DK  P          P 
Sbjct: 61  LRKKVAFAELVSVTKVEPPKKEDEKKGGDGKGAEGKGGDQKGGDKKGPDDK------EPP 120

Query: 121 QPSYCHCYLDPCSSY 122
           +P    CY  P   Y
Sbjct: 121 EPKPVPCYPWPLQGY 127

[Close]

BLAST of Lcy07g010880 vs. ExPASy TrEMBL
Match: A0A1S3BIE5 (uncharacterized protein LOC103490424 OS=Cucumis melo OX=3656 GN=LOC103490424 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.6e-42
Identity = 95/123 (77.24%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 1   MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIGDVDAIELTELL 60
           MKQKIV+RVSMKRGPKYRSKALKIAASV G++E ISL GDDKDKVEV+GD+D +ELTELL
Sbjct: 1   MKQKIVIRVSMKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPMELTELL 60

Query: 61  RKGFGSAQLESVSAVEDKDKDKDKDKDKDDKDKPQITWTYGWGVPHQPSYCHCY-LDPCS 120
           RKGFGSAQLE+V+AVEDKDKDKDKDK+KD      ITWT  WGVPH  SYC+CY L P  
Sbjct: 61  RKGFGSAQLETVNAVEDKDKDKDKDKNKDG----GITWTCSWGVPHHSSYCYCYNLGPYP 119

Query: 121 SYS 123
           SYS
Sbjct: 121 SYS 119

[Close]

BLAST of Lcy07g010880 vs. ExPASy TrEMBL
Match: A0A6J1FYA9 (uncharacterized protein LOC111449069 OS=Cucurbita moschata OX=3662 GN=LOC111449069 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.0e-39
Identity = 88/124 (70.97%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIGDVDAIELTELL 60
           MKQKIV+RVSMKRG KYRS+ALKIAASV G++E ISL GDDKDK+EV+GD+D IELTE+L
Sbjct: 1   MKQKIVIRVSMKRGAKYRSQALKIAASVLGDIETISLVGDDKDKIEVVGDLDPIELTEML 60

Query: 61  RKGFGSAQLESVSAVEDKDKDKDKDKDKDDKDKPQITWTYGWGVPHQPSYCHCYLDPCSS 120
           RK FG AQLESVS VE K +D+D +KDKD+ ++PQITWT  WGVPHQ  YC+CY  P  S
Sbjct: 61  RKRFGCAQLESVSVVEAKKEDEDVNKDKDE-NEPQITWTCSWGVPHQTPYCYCYHCPYPS 120

Query: 121 YSFW 125
           YS W
Sbjct: 121 YSIW 123

[Close]

BLAST of Lcy07g010880 vs. ExPASy TrEMBL
Match: A0A0A0KAU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113600 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38
Identity = 91/125 (72.80%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 1   MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIGDVDAIELTELL 60
           MKQKIV++VSMKRGPKYRSKALKIAASV G++E ISL GD KDKVEV+GD+D IELTELL
Sbjct: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60

Query: 61  RKGFGSAQLESVSAVEDKDKDKDKDKDKDDKDKPQITWTYGWGVPHQPSYCHCY-LDPCS 120
           RKGFGSAQLESVSAVEDK+K KDKD          ITWT  WGVPH  SYC+CY L P  
Sbjct: 61  RKGFGSAQLESVSAVEDKEKKKDKDDG--------ITWTCSWGVPHHSSYCYCYNLRPYP 117

Query: 121 SYSFW 125
           S+S W
Sbjct: 121 SHSIW 117

[Close]

BLAST of Lcy07g010880 vs. ExPASy TrEMBL
Match: A0A6J1J992 (uncharacterized protein LOC111484603 OS=Cucurbita maxima OX=3661 GN=LOC111484603 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.6e-38
Identity = 87/125 (69.60%), Postives = 104/125 (83.20%), Query Frame = 0


Query: 1   MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIGDVDAIELTELL 60
           MKQKIV+RVSMKRG KYRS+ALKIAASVSG++E ISL GDDKDK+EV+GD+D IEL ++L
Sbjct: 1   MKQKIVIRVSMKRGSKYRSQALKIAASVSGDIETISLVGDDKDKIEVVGDLDPIELIKML 60

Query: 61  RKGFGSAQLESVSAVEDKDKDKDKDKDKD-DKDKPQITWTYGWGVPHQPSYCHCYLDPCS 120
           RK FG AQLESVS VE K++DK+KDKDKD ++++PQITW    GVPHQ  YC+CY  P  
Sbjct: 61  RKKFGCAQLESVSVVEVKNEDKNKDKDKDKNENEPQITWMCSSGVPHQTPYCYCYHGPYP 120

Query: 121 SYSFW 125
           SYS W
Sbjct: 121 SYSIW 125

[Close]

BLAST of Lcy07g010880 vs. ExPASy TrEMBL
Match: A0A5A7UY93 (Putative Heavy metal transport/detoxification superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001130 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37
Identity = 87/113 (76.99%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 11  MKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIGDVDAIELTELLRKGFGSAQLE 70
           MKRGPKYRSKALKIAASV G++E ISL GDDKDKVEV+GD+D IELTELLRKGFGSAQLE
Sbjct: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPIELTELLRKGFGSAQLE 60

Query: 71  SVSAVEDKDKDKDKDKDKDDKDKPQITWTYGWGVPHQPSYCHCY-LDPCSSYS 123
           +V+AVEDKDKDKDKDK+KD      ITWT  WGVPH  SYC+CY L P  SYS
Sbjct: 61  TVNAVEDKDKDKDKDKNKDG----GITWTCSWGVPHHSSYCYCYNLGPYPSYS 109

[Close]

BLAST of Lcy07g010880 vs. NCBI nr
Match: XP_008448137.1 (PREDICTED: uncharacterized protein LOC103490424 [Cucumis melo])

HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41
Identity = 95/123 (77.24%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 1   MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIGDVDAIELTELL 60
           MKQKIV+RVSMKRGPKYRSKALKIAASV G++E ISL GDDKDKVEV+GD+D +ELTELL
Sbjct: 1   MKQKIVIRVSMKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPMELTELL 60

Query: 61  RKGFGSAQLESVSAVEDKDKDKDKDKDKDDKDKPQITWTYGWGVPHQPSYCHCY-LDPCS 120
           RKGFGSAQLE+V+AVEDKDKDKDKDK+KD      ITWT  WGVPH  SYC+CY L P  
Sbjct: 61  RKGFGSAQLETVNAVEDKDKDKDKDKNKDG----GITWTCSWGVPHHSSYCYCYNLGPYP 119

Query: 121 SYS 123
           SYS
Sbjct: 121 SYS 119

[Close]

BLAST of Lcy07g010880 vs. NCBI nr
Match: XP_038900437.1 (uncharacterized protein LOC120087662 [Benincasa hispida])

HSP 1 Score: 179.5 bits (454), Expect = 1.8e-41
Identity = 94/124 (75.81%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIGDVDAIELTELL 60
           MKQKIV+RVSMKRGPKYRSKALKIA+SV GNVE ISL GDDKDKVEV+GD+D IELT+LL
Sbjct: 1   MKQKIVIRVSMKRGPKYRSKALKIASSVKGNVETISLVGDDKDKVEVVGDLDPIELTKLL 60

Query: 61  RKGFGSAQLESVSAVEDKDKDKDKDKDKDDKDKPQITWTYGWGVPHQPSYCHCYLDPCSS 120
           RK FGSAQLESV+AVE+KDKDKDKDK+        ITWT  WGVPHQ S C+CYL P  S
Sbjct: 61  RKSFGSAQLESVNAVEEKDKDKDKDKELG------ITWTCTWGVPHQSSQCYCYLGPYPS 118

Query: 121 YSFW 125
           YS W
Sbjct: 121 YSIW 118

[Close]

BLAST of Lcy07g010880 vs. NCBI nr
Match: KAG7010798.1 (Heavy metal-associated isoprenylated plant protein 46, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 175.6 bits (444), Expect = 2.6e-40
Identity = 90/124 (72.58%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 1   MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIGDVDAIELTELL 60
           MKQKIV+RVSMKRG KYRSKALKIAASVSG++E ISL GDDKDK+EV+GD+D IELTE+L
Sbjct: 1   MKQKIVIRVSMKRGAKYRSKALKIAASVSGDIETISLVGDDKDKIEVVGDLDPIELTEML 60

Query: 61  RKGFGSAQLESVSAVEDKDKDKDKDKDKDDKDKPQITWTYGWGVPHQPSYCHCYLDPCSS 120
           RK FG AQLESVS VE K +D+D +KDKD+ ++PQITWT  WGVPHQ +YC+CY  P  S
Sbjct: 61  RKRFGCAQLESVSVVEAKKEDEDMNKDKDE-NEPQITWTCSWGVPHQTAYCYCYHCPYPS 120

Query: 121 YSFW 125
           YS W
Sbjct: 121 YSIW 123

[Close]

BLAST of Lcy07g010880 vs. NCBI nr
Match: XP_022944683.1 (uncharacterized protein LOC111449069 [Cucurbita moschata])

HSP 1 Score: 170.6 bits (431), Expect = 8.3e-39
Identity = 88/124 (70.97%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIGDVDAIELTELL 60
           MKQKIV+RVSMKRG KYRS+ALKIAASV G++E ISL GDDKDK+EV+GD+D IELTE+L
Sbjct: 1   MKQKIVIRVSMKRGAKYRSQALKIAASVLGDIETISLVGDDKDKIEVVGDLDPIELTEML 60

Query: 61  RKGFGSAQLESVSAVEDKDKDKDKDKDKDDKDKPQITWTYGWGVPHQPSYCHCYLDPCSS 120
           RK FG AQLESVS VE K +D+D +KDKD+ ++PQITWT  WGVPHQ  YC+CY  P  S
Sbjct: 61  RKRFGCAQLESVSVVEAKKEDEDVNKDKDE-NEPQITWTCSWGVPHQTPYCYCYHCPYPS 120

Query: 121 YSFW 125
           YS W
Sbjct: 121 YSIW 123

[Close]

BLAST of Lcy07g010880 vs. NCBI nr
Match: XP_004140067.1 (uncharacterized protein LOC101216311 [Cucumis sativus] >KGN46623.1 hypothetical protein Csa_005620 [Cucumis sativus])

HSP 1 Score: 169.1 bits (427), Expect = 2.4e-38
Identity = 91/125 (72.80%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 1   MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIGDVDAIELTELL 60
           MKQKIV++VSMKRGPKYRSKALKIAASV G++E ISL GD KDKVEV+GD+D IELTELL
Sbjct: 1   MKQKIVIQVSMKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELL 60

Query: 61  RKGFGSAQLESVSAVEDKDKDKDKDKDKDDKDKPQITWTYGWGVPHQPSYCHCY-LDPCS 120
           RKGFGSAQLESVSAVEDK+K KDKD          ITWT  WGVPH  SYC+CY L P  
Sbjct: 61  RKGFGSAQLESVSAVEDKEKKKDKDDG--------ITWTCSWGVPHHSSYCYCYNLRPYP 117

Query: 121 SYSFW 125
           S+S W
Sbjct: 121 SHSIW 117

[Close]

BLAST of Lcy07g010880 vs. TAIR 10
Match: AT5G48290.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 9.9e-06
Identity = 45/135 (33.33%), Postives = 66/135 (48.89%), Query Frame = 0


Query: 1   MKQKIVVRVSMKRGPKYRSKALKIAASVSGNVEKISLEGDDKDKVEVIG-DVDAIELTEL 60
           MKQKI++RV+M    K R+KA+  A    G V  + ++GD ++++EV G +VD I L ++
Sbjct: 1   MKQKILIRVTM-TDDKTRAKAMTKAVQFKG-VSAVEIKGDHRNQIEVTGVEVDMIPLIQI 60

Query: 61  LRKGFGSAQLESVSAVEDKDKDKDK-------------DKDKDDKDKPQITWTYGWGVPH 120
           LRK    A+L SV+ VE   K+ +K             D+   DK  P          P 
Sbjct: 61  LRKKVAFAELVSVTKVEPPKKEDEKKGGDGKGAEGKGGDQKGGDKKGPDDK------EPP 120

Query: 121 QPSYCHCYLDPCSSY 122
           +P    CY  P   Y
Sbjct: 121 EPKPVPCYPWPLQGY 127

The following BLAST results are available for this feature:

BLAST of Lcy07g010880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5PNZ7	1.4e-04	33.33	Heavy metal-associated isoprenylated plant protein 46 OS=Arabidopsis thaliana OX...	[more]

BLAST of Lcy07g010880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIE5	6.6e-42	77.24	uncharacterized protein LOC103490424 OS=Cucumis melo OX=3656 GN=LOC103490424 PE=...	[more]
A0A6J1FYA9	4.0e-39	70.97	uncharacterized protein LOC111449069 OS=Cucurbita moschata OX=3662 GN=LOC1114490...	[more]
A0A0A0KAU7	1.2e-38	72.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113600 PE=4 SV=1	[more]
A0A6J1J992	7.6e-38	69.60	uncharacterized protein LOC111484603 OS=Cucurbita maxima OX=3661 GN=LOC111484603...	[more]
A0A5A7UY93	1.3e-37	76.99	Putative Heavy metal transport/detoxification superfamily protein OS=Cucumis mel...	[more]

BLAST of Lcy07g010880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448137.1	1.4e-41	77.24	PREDICTED: uncharacterized protein LOC103490424 [Cucumis melo]	[more]
XP_038900437.1	1.8e-41	75.81	uncharacterized protein LOC120087662 [Benincasa hispida]	[more]
KAG7010798.1	2.6e-40	72.58	Heavy metal-associated isoprenylated plant protein 46, partial [Cucurbita argyro...	[more]
XP_022944683.1	8.3e-39	70.97	uncharacterized protein LOC111449069 [Cucurbita moschata]	[more]
XP_004140067.1	2.4e-38	72.80	uncharacterized protein LOC101216311 [Cucumis sativus] >KGN46623.1 hypothetical ...	[more]

BLAST of Lcy07g010880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48290.1	9.9e-06	33.33	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 1..78 e-value: 2.1E-22 score: 81.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..95
None	No IPR available	PANTHER	PTHR46371:SF7	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 46	coord: 3..105
IPR044296	Heavy metal-associated isoprenylated plant protein 16/46/47	PANTHER	PTHR46371	OS04G0464100 PROTEIN	coord: 3..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g010880.1	Lcy07g010880.1	mRNA