Lcy07g010820 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g010820
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RNase H domain-containing protein
Location	Chr07: 39952923 .. 39954176 (-)
RNA-Seq Expression	Lcy07g010820
Synteny	Lcy07g010820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGAGTCGAGTCTTCACCTGTTCTGGCATTGTAAGCATACGAAGGAGATTATGTGGTCTGCAAGGTTTGGGGCTATTTTGTCCAAATGCAAGGCAGACGACATTAAGTTCCTCCTCCGAGATGTAAAGGATGAGTTGGAGTGGGATCGGTTTGAGGAATGGGTGGTGTTATTATGGGCGATCTGGTACAGGCGGAATGAAATGAGGCAGAGGAAGAAGGTCTCGATGGCGAATCTGGCAGATTGGGTGGTTGGGTATCTAAACGCATTCCTGATTCGGGGAGGGGGGAGATGGATCTGTTGGGGGGAAGTCCTAGTCGGGCGGTTTGCAGGTGGGCGCCGCCAGAGGCTGATGGGTTCAAGGTGAATGTTGATGCGGCCTTTTGTCGGGTGAGCGGAACAGCAGGTGTAGGCGTGGTATGTCGAGATTCTTGGGGGCAGGTGGGTTTCGCAGCTACGGCTTTCTATGAGAATATCAGAGATGCTGACTTTGCAGAAGGTTTGGGGGCTGCTGTCGGCCTGAGACTTGCTGTGGAGACGGCTACTCGACCTTTTGTACTAGAGACTGACTCTATGCGGGTATTCAAGCTGCTGCAGCGGGATAGGGAGGAGGTGTCGGAGTTGGGGATGTTGGTGGAGGATGCCGTGAGGGGTGTCCCAGCAGGGTGGTTTATTGGCGGCAACTTTACGTTCAGGGAAGGCAACTGCGTTGCCCATCGTTTGGCAAGGTTGGCGATGGAGGACAGATGTGACCGAGTGTGGATGGAAGAAGGCCCTTCATGTGTTTTGGGCTTGTTGGCTGAAGAGGGAGTGCATGAGTTTCCCCAGGCGAAGAGGGAAGGGTGATCAGTCTAAGCAGATCCAGCTGCCGCCCCAACCAGTTTGCCCAATCTCAGGGAAGGTTTTCTATTTACCTTTCTTTATCCTTAAGTTTTGCATGGTTGGATTTTTCTGGAGGAATGTTATGTTTTAGGTTGGGGGTGGGAGATGGTGTAGGCTAGTGGGCTTTGGTTTAAGTCTGGATGCATCTGAGAACCAGGCTAATTTATTGTTTTACTATTGTTATACTGCATCTGTTTTGCTCTGTTGGATTGGGTTGAGGCGCCATGCACCTGAGCATTGGACCTGCTGTCCTCCCCTTTTTGATTATCTATGGCTTTGTTGAGCTTAAATGGTTAGGGTCTTTGTTGTAGTTATCATGGTTGATGTCTTGTGTGCTCTCTGCTTTCTCTTATGCTTTTGTTGATAGTGA

mRNA sequence

ATGGGGGAGTCGAGTCTTCACCTGTTCTGGCATTGTAAGCATACGAAGGAGATTATGTGGTCTGCAAGGTTTGGGGCTATTTTGTCCAAATGCAAGGCAGACGACATTAAGTTCCTCCTCCGAGATGTAAAGGATGAGTTGGAGTGGGATCGGTTTGAGGAATGGGTGGTGTTATTATGGGCGATCTGGTACAGGCGGAATGAAATGAGGCAGAGGAAGAAGGTCTCGATGGCGAATCTGGCAGATTGGGTGGTTGGGTGGGCGCCGCCAGAGGCTGATGGGTTCAAGGTGAATGTTGATGCGGCCTTTTGTCGGGTGAGCGGAACAGCAGGTGTAGGCGTGGTATGTCGAGATTCTTGGGGGCAGGTGGGTTTCGCAGCTACGGCTTTCTATGAGAATATCAGAGATGCTGACTTTGCAGAAGGTTTGGGGGCTGCTGTCGGCCTGAGACTTGCTGTGGAGACGGCTACTCGACCTTTTGTACTAGAGACTGACTCTATGCGGGTATTCAAGCTGCTGCAGCGGGATAGGGAGGAGGTGTCGGAGTTGGGGATGTTGGTGGAGGATGCCGTGAGGGGTGTCCCAGCAGGGTGGTTTATTGGCGGCAACTTTACGTTCAGGGAAGGCAACTGCGTTGCCCATCGTTTGGCAAGGTTGGCGATGGAGGACAGATGTGACCGAGTGTGGATGGAAGAAGGCCCTTCATGTGTTTTGGGCTTGTTGGCTGAAGAGGGATGA

Coding sequence (CDS)

ATGGGGGAGTCGAGTCTTCACCTGTTCTGGCATTGTAAGCATACGAAGGAGATTATGTGGTCTGCAAGGTTTGGGGCTATTTTGTCCAAATGCAAGGCAGACGACATTAAGTTCCTCCTCCGAGATGTAAAGGATGAGTTGGAGTGGGATCGGTTTGAGGAATGGGTGGTGTTATTATGGGCGATCTGGTACAGGCGGAATGAAATGAGGCAGAGGAAGAAGGTCTCGATGGCGAATCTGGCAGATTGGGTGGTTGGGTGGGCGCCGCCAGAGGCTGATGGGTTCAAGGTGAATGTTGATGCGGCCTTTTGTCGGGTGAGCGGAACAGCAGGTGTAGGCGTGGTATGTCGAGATTCTTGGGGGCAGGTGGGTTTCGCAGCTACGGCTTTCTATGAGAATATCAGAGATGCTGACTTTGCAGAAGGTTTGGGGGCTGCTGTCGGCCTGAGACTTGCTGTGGAGACGGCTACTCGACCTTTTGTACTAGAGACTGACTCTATGCGGGTATTCAAGCTGCTGCAGCGGGATAGGGAGGAGGTGTCGGAGTTGGGGATGTTGGTGGAGGATGCCGTGAGGGGTGTCCCAGCAGGGTGGTTTATTGGCGGCAACTTTACGTTCAGGGAAGGCAACTGCGTTGCCCATCGTTTGGCAAGGTTGGCGATGGAGGACAGATGTGACCGAGTGTGGATGGAAGAAGGCCCTTCATGTGTTTTGGGCTTGTTGGCTGAAGAGGGATGA

Protein sequence

MGESSLHLFWHCKHTKEIMWSARFGAILSKCKADDIKFLLRDVKDELEWDRFEEWVVLLWAIWYRRNEMRQRKKVSMANLADWVVGWAPPEADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLRLAVETATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGGNFTFREGNCVAHRLARLAMEDRCDRVWMEEGPSCVLGLLAEEG

Homology

[Close]

BLAST of Lcy07g010820 vs. ExPASy TrEMBL
Match: A0A6J1C467 (uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007775 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.8e-28
Identity = 84/231 (36.36%), Postives = 117/231 (50.65%), Query Frame = 0


Query: 45  DELEWDRFEEWVVLLWAIWYRRNE--MRQRKKVSMANLADWVV----------------- 104
           D ++W   EE  V LWAIW  RN+          + N+ DWV                  
Sbjct: 2   DRIKWTGLEELSVFLWAIWNARNQSMFTNGHGFLLVNMVDWVADYLQVYQSAQEGPSLPL 61

Query: 105 ----------GWAPPEADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIR 164
                      W PP A  FKVNVDAAF + + +AG+ ++ RDS   V  +A  F  ++ 
Sbjct: 62  LLDGRGGRVSAWCPPLAPFFKVNVDAAFKKGNFSAGLDILIRDSTVNVLLSAMCFITHVS 121

Query: 165 DADFAEGLGAAVGLRLAVETATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVP 224
           D   AE L A  G+ LA+E    PF +ETDS +VF LL+ D E+ SE+G+L   ++R + 
Sbjct: 122 DVTLAECLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDCEDESEIGVLA-SSIRHIV 181

Query: 225 AGWFIGGNFTF--REGNCVAHRLARLAMEDRCDRVWMEEGPSCVLGLLAEE 245
           +   IGG F+F  REGN  AH LAR+ M      VW+EE  S +  ++A +
Sbjct: 182 SSLHIGGGFSFVNREGNSGAHTLARMGMVSESFHVWVEEWLSDLSEVIAAD 231

[Close]

BLAST of Lcy07g010820 vs. ExPASy TrEMBL
Match: A0A6J1CDQ4 (uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010533 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26
Identity = 78/225 (34.67%), Postives = 114/225 (50.67%), Query Frame = 0


Query: 39  LLRDVKDELEWDRFEEWVVLLWAIWYRRNE-MRQRKKVSMANLADWV------------- 98
           +LRD +D L W  FEE VV LW++W RRN  +  +++V   +LA WV             
Sbjct: 4   ILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTN 63

Query: 99  ------------------------VGWAPPEADGFKVNVDAAFCRVSGTAGVGV-VCRDS 158
                                     W P E   FK+  DA+F  +   AG+GV + RD 
Sbjct: 64  HATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIIIRDH 123

Query: 159 WGQVGFAATAFYENIRDADFAEGLGAAVGLRLAVETATRPFVLETDSMRVFKLLQRDREE 218
            GQV  +AT + E++   D AE L A  GLR+A+ET   P +LETDS+R++ L  RD+E 
Sbjct: 124 RGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEG 183

Query: 219 VSELGMLVEDAVRGVPAGWFIGGNFTFREGNCVAHRLARLAMEDR 225
           +S+ G ++E     +     +  +FT R GN +AH LAR A++ +
Sbjct: 184 LSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQ 228

[Close]

BLAST of Lcy07g010820 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-24
Identity = 83/237 (35.02%), Postives = 112/237 (47.26%), Query Frame = 0


Query: 35  DIKFLLRDVKDELEWDRFEEWVVLLWAIWYRRNEMRQRKKV--SMANLADW--------- 94
           D+   +R   D + W      VVLLWAIW  RN+  Q   +  S+++L  W         
Sbjct: 24  DMGHFMRVWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFSLGGSLSDLVSWSENYLQVYQ 83

Query: 95  -----------------VVGWAPPEADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFA 154
                            V  W PP A   KVNVDAAF + S  AGVGV+ RDS G V   
Sbjct: 84  AAQRSSXSALVVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLT 143

Query: 155 ATAFYENIRDADFAEGLGAAVGLRLAVETATRPFVLETDSMRVFKLLQRDREEVSELGML 214
           A        D D+ EG     G+ LAVE     F +ETDS+R+F LL  D  + SE+G+L
Sbjct: 144 AIRLLARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVL 203

Query: 215 VEDAVRGVPA-GWFIGGNFTFREGNCVAHRLARLAMEDRCDRVWMEEGPSCVLGLLA 243
                  + +    +  +FT R GN  AH LA+LA+     ++W+EE P  +  +LA
Sbjct: 204 CSVIKLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLA 260

[Close]

BLAST of Lcy07g010820 vs. ExPASy TrEMBL
Match: A0A803PAX6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.7e-23
Identity = 73/263 (27.76%), Postives = 130/263 (49.43%), Query Frame = 0


Query: 3    ESSLHLFWHCKHTKEIMWSARFGAILSKCKADDIKFLLRDVKDELEWDRFEEWVVLLWAI 62
            E+  H  W C ++K+I     +  +L + K   I  L+ ++++++  + F  ++++ W I
Sbjct: 1056 ETIEHCLWFCPYSKQIWKKYPWWKVLKQSKGTIIDILI-NIRNQVAKEEFNFFIIMSWLI 1115

Query: 63   WYRRNE------------------------MRQRKKVSMANLADWV--VGWAPPEADGFK 122
            W RRN+                        M Q  K+   NL   +  +GW PP  + F 
Sbjct: 1116 WNRRNKKRLNHFMSSQESWLKWAQMEVDYIMHQDPKLESHNLTKPLKHLGWEPPPVNIFC 1175

Query: 123  VNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLRLAVETA 182
            +N DA+        G+GVV R + G+V  AAT     +   + AE L   +G+ LAV+T+
Sbjct: 1176 INSDASVHYTEAEIGLGVVIRTNKGEVTAAATQHVNGVFSIELAEALAIQMGISLAVQTS 1235

Query: 183  TRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFI---GGNFTFREGNCVA 237
              PF++++D +RV + ++   +  ++ G L+++     PA  F+     + T R  N VA
Sbjct: 1236 AIPFIIQSDCLRVIEYIKGKFQAKTDWGALLDEV--SDPA--FVHCQAASHTSRNNNRVA 1295

[Close]

BLAST of Lcy07g010820 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-21
Identity = 78/263 (29.66%), Postives = 115/263 (43.73%), Query Frame = 0


Query: 2    GESSLHLFWHCKHTKEIMWSARFGAILSKCKADDIKFLLRDVKDELEWDRFEEWVVLLWA 61
            GE S+HLFW CK  + +  +++FG +           +LR+  + L    FEE  V++W 
Sbjct: 884  GEDSIHLFWICKFAEALWINSKFGKL-------SPFLILRESHESLSKADFEELCVVIWG 943

Query: 62   IWYRRN------EMRQRKKVSMANLADWV------------------------VGWAPPE 121
            +W +RN        +   K+ M  L +W                         + W PP+
Sbjct: 944  LWNQRNARAFNDSTKTVFKIGM-ELVEWANKYAMEFREAKSNPITGRVTNTAEILWQPPD 1003

Query: 122  ADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLRL 181
               +K+N DA+F      AG+G++  +  GQV  AAT + ENI+  D AE + A  GL+L
Sbjct: 1004 EGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQL 1063

Query: 182  AVETATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGGNFTFREGNC 235
            A E    P +                E++SE G +V  A            NF  REGN 
Sbjct: 1064 ASEIGMHPAL----------------EDLSETGEIVLKAKNFWTQSLHASFNFVKREGNK 1122

[Close]

BLAST of Lcy07g010820 vs. NCBI nr
Match: XP_022135942.1 (uncharacterized protein LOC111007775 [Momordica charantia])

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-27
Identity = 84/231 (36.36%), Postives = 117/231 (50.65%), Query Frame = 0


Query: 45  DELEWDRFEEWVVLLWAIWYRRNE--MRQRKKVSMANLADWVV----------------- 104
           D ++W   EE  V LWAIW  RN+          + N+ DWV                  
Sbjct: 2   DRIKWTGLEELSVFLWAIWNARNQSMFTNGHGFLLVNMVDWVADYLQVYQSAQEGPSLPL 61

Query: 105 ----------GWAPPEADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIR 164
                      W PP A  FKVNVDAAF + + +AG+ ++ RDS   V  +A  F  ++ 
Sbjct: 62  LLDGRGGRVSAWCPPLAPFFKVNVDAAFKKGNFSAGLDILIRDSTVNVLLSAMCFITHVS 121

Query: 165 DADFAEGLGAAVGLRLAVETATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVP 224
           D   AE L A  G+ LA+E    PF +ETDS +VF LL+ D E+ SE+G+L   ++R + 
Sbjct: 122 DVTLAECLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDCEDESEIGVLA-SSIRHIV 181

Query: 225 AGWFIGGNFTF--REGNCVAHRLARLAMEDRCDRVWMEEGPSCVLGLLAEE 245
           +   IGG F+F  REGN  AH LAR+ M      VW+EE  S +  ++A +
Sbjct: 182 SSLHIGGGFSFVNREGNSGAHTLARMGMVSESFHVWVEEWLSDLSEVIAAD 231

[Close]

BLAST of Lcy07g010820 vs. NCBI nr
Match: XP_022139684.1 (uncharacterized protein LOC111010533 [Momordica charantia])

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-26
Identity = 78/225 (34.67%), Postives = 114/225 (50.67%), Query Frame = 0


Query: 39  LLRDVKDELEWDRFEEWVVLLWAIWYRRNE-MRQRKKVSMANLADWV------------- 98
           +LRD +D L W  FEE VV LW++W RRN  +  +++V   +LA WV             
Sbjct: 4   ILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKATNTN 63

Query: 99  ------------------------VGWAPPEADGFKVNVDAAFCRVSGTAGVGV-VCRDS 158
                                     W P E   FK+  DA+F  +   AG+GV + RD 
Sbjct: 64  HATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIIIRDH 123

Query: 159 WGQVGFAATAFYENIRDADFAEGLGAAVGLRLAVETATRPFVLETDSMRVFKLLQRDREE 218
            GQV  +AT + E++   D AE L A  GLR+A+ET   P +LETDS+R++ L  RD+E 
Sbjct: 124 RGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARDKEG 183

Query: 219 VSELGMLVEDAVRGVPAGWFIGGNFTFREGNCVAHRLARLAMEDR 225
           +S+ G ++E     +     +  +FT R GN +AH LAR A++ +
Sbjct: 184 LSKTGSIIEYVKTHLATRLQVSYSFTKRTGNTIAHLLARRALQSQ 228

[Close]

BLAST of Lcy07g010820 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-24
Identity = 83/237 (35.02%), Postives = 112/237 (47.26%), Query Frame = 0


Query: 35  DIKFLLRDVKDELEWDRFEEWVVLLWAIWYRRNEMRQRKKV--SMANLADW--------- 94
           D+   +R   D + W      VVLLWAIW  RN+  Q   +  S+++L  W         
Sbjct: 24  DMGHFMRVWTDLVSWQHIGAIVVLLWAIWNARNQTPQHFSLGGSLSDLVSWSENYLQVYQ 83

Query: 95  -----------------VVGWAPPEADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFA 154
                            V  W PP A   KVNVDAAF + S  AGVGV+ RDS G V   
Sbjct: 84  AAQRSSXSALVVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLT 143

Query: 155 ATAFYENIRDADFAEGLGAAVGLRLAVETATRPFVLETDSMRVFKLLQRDREEVSELGML 214
           A        D D+ EG     G+ LAVE     F +ETDS+R+F LL  D  + SE+G+L
Sbjct: 144 AIRLLARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVL 203

Query: 215 VEDAVRGVPA-GWFIGGNFTFREGNCVAHRLARLAMEDRCDRVWMEEGPSCVLGLLA 243
                  + +    +  +FT R GN  AH LA+LA+     ++W+EE P  +  +LA
Sbjct: 204 CSVIKLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPDEISSVLA 260

[Close]

BLAST of Lcy07g010820 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-21
Identity = 78/263 (29.66%), Postives = 115/263 (43.73%), Query Frame = 0


Query: 2    GESSLHLFWHCKHTKEIMWSARFGAILSKCKADDIKFLLRDVKDELEWDRFEEWVVLLWA 61
            GE S+HLFW CK  + +  +++FG +           +LR+  + L    FEE  V++W 
Sbjct: 884  GEDSIHLFWICKFAEALWINSKFGKL-------SPFLILRESHESLSKADFEELCVVIWG 943

Query: 62   IWYRRN------EMRQRKKVSMANLADWV------------------------VGWAPPE 121
            +W +RN        +   K+ M  L +W                         + W PP+
Sbjct: 944  LWNQRNARAFNDSTKTVFKIGM-ELVEWANKYAMEFREAKSNPITGRVTNTAEILWQPPD 1003

Query: 122  ADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAAVGLRL 181
               +K+N DA+F      AG+G++  +  GQV  AAT + ENI+  D AE + A  GL+L
Sbjct: 1004 EGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQL 1063

Query: 182  AVETATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGGNFTFREGNC 235
            A E    P +                E++SE G +V  A            NF  REGN 
Sbjct: 1064 ASEIGMHPAL----------------EDLSETGEIVLKAKNFWTQSLHASFNFVKREGNK 1122

[Close]

BLAST of Lcy07g010820 vs. NCBI nr
Match: XP_022140628.1 (uncharacterized protein LOC111011237 [Momordica charantia])

HSP 1 Score: 112.5 bits (280), Expect = 5.3e-21
Identity = 60/148 (40.54%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 87  WAPPEADGFKVNVDAAFCRVSGTAGVGVVCRDSWGQVGFAATAFYENIRDADFAEGLGAA 146
           W PP+   +K+N DA+F      AG+G++ R+  GQV  +AT + ENI+  D AE + A 
Sbjct: 34  WLPPDKRIYKINTDASFLASDQHAGLGIIIRNDRGQVMASATKYLENIQSVDMAEAIVAV 93

Query: 147 VGLRLAVETATRPFVLETDSMRVFKLLQRDREEVSELGMLVEDAVRGVPAGWFIGGNFTF 206
            GL+LA +    P +LETDS R+F L  +  E++SE G +V  A            NF  
Sbjct: 94  EGLQLASKIGVNPVILETDSSRIFNLFSQPSEDLSETGEIVLKAKNFWTQSLHASFNFVK 153

Query: 207 REGNCVAHRLARLAMEDRCDRVWMEEGP 235
           REGN  AH LAR A+  R   +WME+ P
Sbjct: 154 REGNKAAHMLARRALLLREFSIWMEDWP 181

The following BLAST results are available for this feature:

BLAST of Lcy07g010820 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g010820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C467	4.8e-28	36.36	uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1CDQ4	1.6e-26	34.67	uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1DBJ7	1.1e-24	35.02	uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A803PAX6	4.7e-23	27.76	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A6J1DAR4	1.5e-21	29.66	uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Lcy07g010820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135942.1	1.0e-27	36.36	uncharacterized protein LOC111007775 [Momordica charantia]	[more]
XP_022139684.1	3.2e-26	34.67	uncharacterized protein LOC111010533 [Momordica charantia]	[more]
XP_022150944.1	2.3e-24	35.02	uncharacterized protein LOC111018973 [Momordica charantia]	[more]
XP_022150918.1	3.1e-21	29.66	uncharacterized protein LOC111018954 [Momordica charantia]	[more]
XP_022140628.1	5.3e-21	40.54	uncharacterized protein LOC111011237 [Momordica charantia]	[more]

BLAST of Lcy07g010820 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 98..220 e-value: 1.2E-17 score: 63.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 93..224 e-value: 8.1E-9 score: 37.6
None	No IPR available	PANTHER	PTHR47723	OS05G0353850 PROTEIN	coord: 84..233
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 97..218 e-value: 5.82672E-12 score: 59.25
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 95..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g010820.1	Lcy07g010820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity