Lcy07g010260 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g010260
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc-regulated protein 8-like
Location	Chr07: 39196158 .. 39196766 (+)
RNA-Seq Expression	Lcy07g010260
Synteny	Lcy07g010260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATCTTCTCCTCTCCTCAACTCCCACTCTCCCACTTTCCTCTCTCCCGATCGCCCTCTCAGCTCGCCGGAACTCGAAATCTCCGACATCGAACTGACCCCTCTCCAATCCTACACCAGCCTCAAGGACCTCCTCTCGGACACCCTCTCACCGCCGCCCTCCGCCGCCTCCCCCCGGAACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCTTACCTCCAGCCGATGCTCGTCCCGCCGGCCGCCCGCGACGGCGGCTTCATGCGCAAGCTCAAGAAGCACGGCTTCGGATGCATCGAGTGGCTCGGCGCCGTCGTCCTTGCCCTCGCCGGAGATCTCTCCGGCTGTGGAGTCCGGCGCTGGGAGTGATCGGATGCCTGCAGCTTCCTACGAAACTTCCAGTTGACTGGCGGATAGGAAGGAACAGAAACTTGACCAATTTTTTCTTTTTTATAAATTAGTTTTTTTTTTGTTTTTAAATATTTATGTAATTGTCCCTTTATTTTTCAGTGGGGTGATTGTGTAATTAAAAATGAGATTTGTTCTTAATGTTTATATAATGTGATGATTTGTGGATGCATATGATTGGAT

mRNA sequence

ATGGAAGAATCTTCTCCTCTCCTCAACTCCCACTCTCCCACTTTCCTCTCTCCCGATCGCCCTCTCAGCTCGCCGGAACTCGAAATCTCCGACATCGAACTGACCCCTCTCCAATCCTACACCAGCCTCAAGGACCTCCTCTCGGACACCCTCTCACCGCCGCCCTCCGCCGCCTCCCCCCGGAACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCTTACCTCCAGCCGATGCTCGTCCCGCCGGCCGCCCGCGACGGCGGCTTCATGCGCAAGCTCAAGAAGCACGGCTTCGGATGCATCGAGTGGCTCGGCGCCGTCGTCCTTGCCCTCGCCGGAGATCTCTCCGGCTGTGGAGTCCGGCGCTGGGAGTGATCGGATGCCTGCAGCTTCCTACGAAACTTCCAGTTGACTGGCGGATAGGAAGGAACAGAAACTTGACCAATTTTTTCTTTTTTATAAATTAGTTTTTTTTTTGTTTTTAAATATTTATGTAATTGTCCCTTTATTTTTCAGTGGGGTGATTGTGTAATTAAAAATGAGATTTGTTCTTAATGTTTATATAATGTGATGATTTGTGGATGCATATGATTGGAT

Coding sequence (CDS)

ATGGAAGAATCTTCTCCTCTCCTCAACTCCCACTCTCCCACTTTCCTCTCTCCCGATCGCCCTCTCAGCTCGCCGGAACTCGAAATCTCCGACATCGAACTGACCCCTCTCCAATCCTACACCAGCCTCAAGGACCTCCTCTCGGACACCCTCTCACCGCCGCCCTCCGCCGCCTCCCCCCGGAACGAACTCCCCATCAAAAACCCACTCGTCAAACACGCCGCCTTGGCTTACCTCCAGCCGATGCTCGTCCCGCCGGCCGCCCGCGACGGCGGCTTCATGCGCAAGCTCAAGAAGCACGGCTTCGGATGCATCGAGTGGCTCGGCGCCGTCGTCCTTGCCCTCGCCGGAGATCTCTCCGGCTGTGGAGTCCGGCGCTGGGAGTGA

Protein sequence

MEESSPLLNSHSPTFLSPDRPLSSPELEISDIELTPLQSYTSLKDLLSDTLSPPPSAASPRNELPIKNPLVKHAALAYLQPMLVPPAARDGGFMRKLKKHGFGCIEWLGAVVLALAGDLSGCGVRRWE

Homology

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BLAST of Lcy07g010260 vs. ExPASy TrEMBL
Match: A0A0A0LPR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 7.6e-33
Identity = 84/115 (73.04%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 1   MEESSPLLNSHSPT-FLSPDRPLSSPELEIS-DIELTPLQSYTSLKDLLSDTLSPPPSAA 60
           ME+S     S SPT FLSP+ PLSSPELE S DIE+TPLQSYTSLKDLL D+ SPPPSA 
Sbjct: 1   MEDSPSPSPSPSPTSFLSPNHPLSSPELEFSDDIEMTPLQSYTSLKDLLPDSPSPPPSAT 60

Query: 61  SPR-NELPIKNPLVKHAALAYLQPMLVPPAARDGGFMRKLKKHGFGCIEWLGAVV 113
           SP  ++LPIKNPLVKHAALAYLQPML PP      F+R LKKHGFGCIEWL AVV
Sbjct: 61  SPAFDQLPIKNPLVKHAALAYLQPMLTPPTTSHPTFLRILKKHGFGCIEWLAAVV 115

[Close]

BLAST of Lcy07g010260 vs. ExPASy TrEMBL
Match: A0A6P4ADJ4 (zinc-regulated protein 8-like OS=Ziziphus jujuba OX=326968 GN=LOC107427391 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.5e-20
Identity = 70/130 (53.85%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 9   NSHSPTFLSPDRPLSSPELEISDIELTPLQS--YTSLKDLLSDTLSPPPSAASPR----- 68
           +SHSPTFL  D  L SPE ++SDIE+  +QS  YTSLKDLL    SPPP+  SP      
Sbjct: 24  HSHSPTFLFHDGGLDSPEFKVSDIEMITIQSLTYTSLKDLLPP--SPPPAIMSPTHNSSW 83

Query: 69  NELPIKNPLVKHAALAYLQPMLVPPAARDGGFMRKLKKH--------GFGCIEWLGAVVL 124
           +E+PI+NPLVKHAALAYLQPM  P  A D G   KLK          GFGC  WLG VVL
Sbjct: 84  HEIPIRNPLVKHAALAYLQPMSTPTEADDKGLFGKLKDKCLCGAAGGGFGCFGWLGDVVL 143

[Close]

BLAST of Lcy07g010260 vs. ExPASy TrEMBL
Match: A0A5N5IAH8 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_026801 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.8e-19
Identity = 69/127 (54.33%), Postives = 79/127 (62.20%), Query Frame = 0


Query: 6   PLLNSHSPTFLSPDRPLSSPELEISDIELTPLQ--SYTSLKDLLSDTLSPPPSAASP--- 65
           P LNSHSPTFL  +      E+EISDIE+  +Q  SYTSLKDLL    SPP S  SP   
Sbjct: 57  PTLNSHSPTFLLHNG--FGDEIEISDIEMVTIQTVSYTSLKDLL--PASPPLSVMSPIHN 116

Query: 66  ---RNELPIKNPLVKHAALAYLQPMLVPPAARDGGFMRKL--KKH-GFGCIEWLGAVVLA 122
               +E+PIKNPLVKHAALAYLQPM  PP   D G +R L  K H   GC+ W+G VVL 
Sbjct: 117 SSWHDEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLGEKCHCELGCLAWVGDVVLK 176

[Close]

BLAST of Lcy07g010260 vs. ExPASy TrEMBL
Match: A0A314Y647 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10650 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 4.1e-18
Identity = 64/126 (50.79%), Postives = 81/126 (64.29%), Query Frame = 0


Query: 9   NSHSPTFLSPDRPLSSPELEISDIELTPLQ--SYTSLKDLLSDTLSPP----PSAASPRN 68
           +SHSP+FL P+      E+EISDIE+  +Q  +YTSLKDLL   +SPP    P+  S  +
Sbjct: 16  HSHSPSFLLPN---GFGEIEISDIEMITIQTVTYTSLKDLL--PVSPPTIMSPTHNSSWH 75

Query: 69  ELPIKNPLVKHAALAYLQPMLVPPAARDGGFMRKLKK-------HGFGCIEWLGAVVLAL 122
           E+PIKNPLVKHAALAYLQPM  PP   D G +R L++       +G GC  WLG VVL+ 
Sbjct: 76  EIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVLSG 135

[Close]

BLAST of Lcy07g010260 vs. ExPASy TrEMBL
Match: A0A314Z2H1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20094 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.3e-18
Identity = 64/126 (50.79%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 9   NSHSPTFLSPDRPLSSPELEISDIELTPLQ--SYTSLKDLLSDTLSPP----PSAASPRN 68
           +SHSP+FL P+      E+EISDIE+  +Q  +YTSLKDLL    SPP    P+  S  +
Sbjct: 18  HSHSPSFLLPN---GFGEIEISDIEMITIQTVTYTSLKDLL--PASPPTIMSPTHNSSWH 77

Query: 69  ELPIKNPLVKHAALAYLQPMLVPPAARDGGFMRKLKK-------HGFGCIEWLGAVVLAL 122
           E+PIKNPLVKHAALAYLQPM  PP   D G +R L++       +G GC  WLG VVL+ 
Sbjct: 78  EIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVLSG 137

[Close]

BLAST of Lcy07g010260 vs. NCBI nr
Match: KAG6571006.1 (hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010836.1 hypothetical protein SDJN02_27632, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 168.7 bits (426), Expect = 3.3e-38
Identity = 93/125 (74.40%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 8   LNSHSPTFLSPDRPLSSPELEISDIELTPLQSYTSLKDLLSDTLSPPPSAASPR-----N 67
           +   SPTFLS DR LSS ELE SDIE+TPLQSYTSLKDLL DT SPPPSAA P      +
Sbjct: 1   MEESSPTFLSSDRLLSSSELEFSDIEMTPLQSYTSLKDLLPDTPSPPPSAAYPLQCPAWD 60

Query: 68  ELPIKNPLVKHAALAYLQPMLVPPAARDGGFMRKLKKHGFGCIEWLGAVVLALAGDLSGC 127
           ELPIKNPLVKHAALAYLQPML PPAA D  FMR+LKKHGFGCIEWL AV+    G+LSG 
Sbjct: 61  ELPIKNPLVKHAALAYLQPMLTPPAAGDRSFMRRLKKHGFGCIEWLVAVI----GELSG- 120

[Close]

BLAST of Lcy07g010260 vs. NCBI nr
Match: XP_015893260.1 (zinc-regulated protein 8-like [Ziziphus jujuba])

HSP 1 Score: 109.0 bits (271), Expect = 3.1e-20
Identity = 70/130 (53.85%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 9   NSHSPTFLSPDRPLSSPELEISDIELTPLQS--YTSLKDLLSDTLSPPPSAASPR----- 68
           +SHSPTFL  D  L SPE ++SDIE+  +QS  YTSLKDLL    SPPP+  SP      
Sbjct: 24  HSHSPTFLFHDGGLDSPEFKVSDIEMITIQSLTYTSLKDLLPP--SPPPAIMSPTHNSSW 83

Query: 69  NELPIKNPLVKHAALAYLQPMLVPPAARDGGFMRKLKKH--------GFGCIEWLGAVVL 124
           +E+PI+NPLVKHAALAYLQPM  P  A D G   KLK          GFGC  WLG VVL
Sbjct: 84  HEIPIRNPLVKHAALAYLQPMSTPTEADDKGLFGKLKDKCLCGAAGGGFGCFGWLGDVVL 143

[Close]

BLAST of Lcy07g010260 vs. NCBI nr
Match: KAB2636267.1 (hypothetical protein D8674_026801 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 104.0 bits (258), Expect = 9.9e-19
Identity = 69/127 (54.33%), Postives = 79/127 (62.20%), Query Frame = 0


Query: 6   PLLNSHSPTFLSPDRPLSSPELEISDIELTPLQ--SYTSLKDLLSDTLSPPPSAASP--- 65
           P LNSHSPTFL  +      E+EISDIE+  +Q  SYTSLKDLL    SPP S  SP   
Sbjct: 57  PTLNSHSPTFLLHNG--FGDEIEISDIEMVTIQTVSYTSLKDLL--PASPPLSVMSPIHN 116

Query: 66  ---RNELPIKNPLVKHAALAYLQPMLVPPAARDGGFMRKL--KKH-GFGCIEWLGAVVLA 122
               +E+PIKNPLVKHAALAYLQPM  PP   D G +R L  K H   GC+ W+G VVL 
Sbjct: 117 SSWHDEIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLGEKCHCELGCLAWVGDVVLK 176

[Close]

BLAST of Lcy07g010260 vs. NCBI nr
Match: PQQ02572.1 (uncharacterized protein Pyn_10650 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 100.9 bits (250), Expect = 8.4e-18
Identity = 64/126 (50.79%), Postives = 81/126 (64.29%), Query Frame = 0


Query: 9   NSHSPTFLSPDRPLSSPELEISDIELTPLQ--SYTSLKDLLSDTLSPP----PSAASPRN 68
           +SHSP+FL P+      E+EISDIE+  +Q  +YTSLKDLL   +SPP    P+  S  +
Sbjct: 16  HSHSPSFLLPN---GFGEIEISDIEMITIQTVTYTSLKDLL--PVSPPTIMSPTHNSSWH 75

Query: 69  ELPIKNPLVKHAALAYLQPMLVPPAARDGGFMRKLKK-------HGFGCIEWLGAVVLAL 122
           E+PIKNPLVKHAALAYLQPM  PP   D G +R L++       +G GC  WLG VVL+ 
Sbjct: 76  EIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCVCGGANGLGCFAWLGDVVLSG 135

[Close]

BLAST of Lcy07g010260 vs. NCBI nr
Match: XP_007199228.2 (uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical protein PRUPE_8G169400 [Prunus persica])

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-17
Identity = 64/126 (50.79%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 9   NSHSPTFLSPDRPLSSPELEISDIELTPLQ--SYTSLKDLLSDTLSPP----PSAASPRN 68
           +SHSP+FL P+      E+EISDIE+  +Q  +YTSLKDLL    SPP    P+  S  +
Sbjct: 18  HSHSPSFLLPN---GFGEIEISDIEMITIQTVTYTSLKDLL--PASPPTIMSPTQNSSWH 77

Query: 69  ELPIKNPLVKHAALAYLQPMLVPPAARDGGFMRKLKK-------HGFGCIEWLGAVVLAL 122
           E+PIKNPLVKHAALAYLQPM  PP   D G +R L++       +G GC  WLG VVL+ 
Sbjct: 78  EIPIKNPLVKHAALAYLQPMSTPPEVGDKGLLRMLREKCLCEGTNGVGCFSWLGDVVLSG 137

The following BLAST results are available for this feature:

BLAST of Lcy07g010260 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g010260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPR9	7.6e-33	73.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G271440 PE=4 SV=1	[more]
A0A6P4ADJ4	1.5e-20	53.85	zinc-regulated protein 8-like OS=Ziziphus jujuba OX=326968 GN=LOC107427391 PE=4 ...	[more]
A0A5N5IAH8	4.8e-19	54.33	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]
A0A314Y647	4.1e-18	50.79	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_106...	[more]
A0A314Z2H1	5.3e-18	50.79	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_200...	[more]

BLAST of Lcy07g010260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571006.1	3.3e-38	74.40	hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_015893260.1	3.1e-20	53.85	zinc-regulated protein 8-like [Ziziphus jujuba]	[more]
KAB2636267.1	9.9e-19	54.33	hypothetical protein D8674_026801 [Pyrus ussuriensis x Pyrus communis]	[more]
PQQ02572.1	8.4e-18	50.79	uncharacterized protein Pyn_10650 [Prunus yedoensis var. nudiflora]	[more]
XP_007199228.2	1.1e-17	50.79	uncharacterized protein LOC18768692 [Prunus persica] >ONH92342.1 hypothetical pr...	[more]

BLAST of Lcy07g010260 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR34569	EXPRESSED PROTEIN	coord: 26..115
None	No IPR available	PANTHER	PTHR34569:SF12	SUBFAMILY NOT NAMED	coord: 26..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g010260.1	Lcy07g010260.1	mRNA