Lcy07g008460 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATCTGACGACAGGTTTTTGGACGTACAATTAATTTTGCTATATATGCAATTAGTTTGCAACTGTGCTATATTTGCTATTAATTTGGTCCAATTTTTCATCTATGCAACTACCCCATAAAATTATTCACATAAAAAAAATACTATTTATAAAATTATTCTCATATAAAAATTAGCGTTCCTAGATGTATAACCAAGCACTGCAATCTATGGTTTCCAACCATTTTATTTTCAAACATCTTATTCTCATCCATCTATTATTTCAGGAATATTAGAGAAACTTTAAGCCCCATCTCTAAGGACATGTTTGAAAGTGAGTTTAAATGGTTAAATGAGTTCTCTTATTAATTACTGCATCTTATTAAATGGTTAAAATCACTTCTTTCATGTTCAAAATCACCCCAAGTATACCTTTAATCATTTAAAATCAATTTTGATTATTATGATAATCACGTTTAAGTAAATCCAAACTTCTTATAATCAAATCATATGGTAAGGCTTATATTGCCCCCAAAAATTTATCTTCTACGGTATGATCATTGAATAATGAGACTTCAGGCTTCTCAAAAACCAGAATAGTCTTCTTTTCAAGGTGCTTCGAGGTCGATATTTTGCCCATAATAACTATCTTGAAGCTTCCCTTGGGAACAACCCATCGCTAACCTGGAGGAGCATTCTTTGGGGCAGAGATCTCTTTAAAAAAGGGATGAAATTGAGAGTGGGTAATGGCCTTCATATTCGGATCAAAGAGGACCCGTGGCTTCCTAGGTCGGGATGTTATACTCCTCTCTAGATTAAAGAAGAGCTCTATGGAAAAAATGTTGAGTTCTTAATTGATGAATATGGCCACTGGAAAGAAGATTTGATTAGAGCATCCTTTTTAACCCCCGACTCAGACTCGATTCTTGAGATCCCTCTTGGTAACAGGGATGTTAAGGATGTCATCATCTGGGGTCCGGACACAAAAGGCCTTTTCTCGGTTAAGAGTGCTTATCATCTAGCCTATAATCTTTCTCAGGCCGGAAAAGGCTCTTCCTCTGATTCCTATCCGATCACCTCTTTTTGGAGAAGTTTTTGGAAAGTGAGCTCTGCTCCTAGAGATAAGATTTGCACTTGGAGAATGATTCAAAACTCTCTCCCTACTCAAGCCAACATCTTAGCTAAAGGCATAGATATTAATCCTCTTTGTTTTTTTTGCAGGAACAAAACTGAATCCGGGGAACATCTTTTCTGGCAATGCAAAAGCTCAAAAGAGGTTTGGCTTTATTTTTTTCCCAAGCTGAATTTGGTCTCAAATTTTTTCAGGGGTGAGCTGGTAGATAGCTCAAAGGAGGTTGATATTTCTATAGCTATGAAGATTATCTGGAGTATTTGGTACTTTAGGAATTCTATCAAGAGGGGAGCAGGCTTTCCAGATGCCAAAAGTATCATCAGAATGGTTAATAGCAGTTATTGTGAGAAAAATCACCTGATTGGCGGCGCTCCAATTCGCTTCAGCCCGGAGAACCTCTCGAGTCAGAGGCCTTGGTCTCCCCCTCCCCTCGGCGTCTGGAAAATTAATTCTGATGCTTCGTGGTCGGAAGATCAACAGCGGGGTGGTCTCGGATGGATTGCCCATGACTCTACAGGTTCTCTTCTCTGTGCTGGTTTCAAACAAATCAATAGAAAATGGCCAATCAAGTGTTTAGAGCTGGAAGCTATGGCGGTGGGTCTGAAGAACTTACTTTCTCATTTGGAGAGGCCTTTTCCGAGGATTATAATCGAAGCGGACTCTTCCGAAGTGATTTCCATCCTCAATCATCGATCAGATGACATTTCCGAAGCTTGGATTGTGGCAAAGAAGGTTGCTGATCTTGCTGCTTTGGTGGGCGACGTTACCTTCTCTTTCAGTCCGCGGGAATCAAATGTCGAAGCGCACTCGTTGGCGTGTTTTGCTGTTGCTCTGAATCTTTTGGATAGTTCTAATTTTTTGGCTTCTTCCATTTCGGAAGAAGGTGTTTTCTGTAAAGAGGTTCTACCTCATTTATTAAACTCTTCCTTTCCTGGGAAGAGTATTTGTTTGGCTGGTGGTGGTTTTTAA AATCTGACGACAGGTTTTTGGACGTACAATTAATTTTGCTATATATGCAATTAGTTTGCAACTGTGCTATATTTGCTATTAATTTGGTCCAATTTTTCATCTATGCAACTACCCCATAAAATTATTCACATAAAAAAAATACTATTTATAAAATTATTCTCATATAAAAATTAGCGTTCCTAGATGTATAACCAAGCACTGCAATCTATGGTTTCCAACCATTTTATTTTCAAACATCTTATTCTCATCCATCTATTATTTCAGGAATATTAGAGAAACTTTAAGCCCCATCTCTAAGGACATGTTTGAAAGTGAGTTTAAATGGTTAAATGAGTTCTCTTATTAATTACTGCATCTTATTAAATGGTTAAAATCACTTCTTTCATGTTCAAAATCACCCCAAGTATACCTTTAATCATTTAAAATCAATTTTGATTATTATGATAATCACGTTTAAGTAAATCCAAACTTCTTATAATCAAATCATATGGTAAGGCTTATATTGCCCCCAAAAATTTATCTTCTACGGTATGATCATTGAATAATGAGACTTCAGGCTTCTCAAAAACCAGAATAGTCTTCTTTTCAAGGTGCTTCGAGGTCGATATTTTGCCCATAATAACTATCTTGAAGCTTCCCTTGGGAACAACCCATCGCTAACCTGGAGGAGCATTCTTTGGGGCAGAGATCTCTTTAAAAAAGGGATGAAATTGAGAGTGGGTAATGGCCTTCATATTCGGATCAAAGAGGACCCGTGGCTTCCTAGGTCGGGATGTTATACTCCTCTCTAGATTAAAGAAGAGCTCTATGGAAAAAATGTTGAGTTCTTAATTGATGAATATGGCCACTGGAAAGAAGATTTGATTAGAGCATCCTTTTTAACCCCCGACTCAGACTCGATTCTTGAGATCCCTCTTGGTAACAGGGATGTTAAGGATGTCATCATCTGGGGTCCGGACACAAAAGGCCTTTTCTCGGTTAAGAGTGCTTATCATCTAGCCTATAATCTTTCTCAGGCCGGAAAAGGCTCTTCCTCTGATTCCTATCCGATCACCTCTTTTTGGAGAAGTTTTTGGAAAGTGAGCTCTGCTCCTAGAGATAAGATTTGCACTTGGAGAATGATTCAAAACTCTCTCCCTACTCAAGCCAACATCTTAGCTAAAGGCATAGATATTAATCCTCTTTGTTTTTTTTGCAGGAACAAAACTGAATCCGGGGAACATCTTTTCTGGCAATGCAAAAGCTCAAAAGAGGTTTGGCTTTATTTTTTTCCCAAGCTGAATTTGGTCTCAAATTTTTTCAGGGGTGAGCTGGTAGATAGCTCAAAGGAGGTTGATATTTCTATAGCTATGAAGATTATCTGGAGTATTTGGTACTTTAGGAATTCTATCAAGAGGGGAGCAGGCTTTCCAGATGCCAAAAGTATCATCAGAATGGTTAATAGCAGTTATTGTGAGAAAAATCACCTGATTGGCGGCGCTCCAATTCGCTTCAGCCCGGAGAACCTCTCGAGTCAGAGGCCTTGGTCTCCCCCTCCCCTCGGCGTCTGGAAAATTAATTCTGATGCTTCGTGGTCGGAAGATCAACAGCGGGGTGGTCTCGGATGGATTGCCCATGACTCTACAGGTTCTCTTCTCTGTGCTGGTTTCAAACAAATCAATAGAAAATGGCCAATCAAGTGTTTAGAGCTGGAAGCTATGGCGGTGGGTCTGAAGAACTTACTTTCTCATTTGGAGAGGCCTTTTCCGAGGATTATAATCGAAGCGGACTCTTCCGAAGTGATTTCCATCCTCAATCATCGATCAGATGACATTTCCGAAGCTTGGATTGTGGCAAAGAAGGTTGCTGATCTTGCTGCTTTGGTGGGCGACGTTACCTTCTCTTTCAGTCCGCGGGAATCAAATGTCGAAGCGCACTCGTTGGCGTGTTTTGCTGTTGCTCTGAATCTTTTGGATAGTTCTAATTTTTTGGCTTCTTCCATTTCGGAAGAAGGTGTTTTCTGTAAAGAGGTTCTACCTCATTTATTAAACTCTTCCTTTCCTGGGAAGAGTATTTGTTTGGCTGGTGGTGGTTTTTAA ATGATTCAAAACTCTCTCCCTACTCAAGCCAACATCTTAGCTAAAGGCATAGATATTAATCCTCTTTGTTTTTTTTGCAGGAACAAAACTGAATCCGGGGAACATCTTTTCTGGCAATGCAAAAGCTCAAAAGAGGTTTGGCTTTATTTTTTTCCCAAGCTGAATTTGGTCTCAAATTTTTTCAGGGGTGAGCTGGTAGATAGCTCAAAGGAGGTTGATATTTCTATAGCTATGAAGATTATCTGGAGTATTTGGTACTTTAGGAATTCTATCAAGAGGGGAGCAGGCTTTCCAGATGCCAAAAGTATCATCAGAATGGTTAATAGCAGTTATTGTGAGAAAAATCACCTGATTGGCGGCGCTCCAATTCGCTTCAGCCCGGAGAACCTCTCGAGTCAGAGGCCTTGGTCTCCCCCTCCCCTCGGCGTCTGGAAAATTAATTCTGATGCTTCGTGGTCGGAAGATCAACAGCGGGGTGGTCTCGGATGGATTGCCCATGACTCTACAGGTTCTCTTCTCTGTGCTGGTTTCAAACAAATCAATAGAAAATGGCCAATCAAGTGTTTAGAGCTGGAAGCTATGGCGGTGGGTCTGAAGAACTTACTTTCTCATTTGGAGAGGCCTTTTCCGAGGATTATAATCGAAGCGGACTCTTCCGAAGTGATTTCCATCCTCAATCATCGATCAGATGACATTTCCGAAGCTTGGATTGTGGCAAAGAAGGTTGCTGATCTTGCTGCTTTGGTGGGCGACGTTACCTTCTCTTTCAGTCCGCGGGAATCAAATGTCGAAGCGCACTCGTTGGCGTGTTTTGCTGTTGCTCTGAATCTTTTGGATAGTTCTAATTTTTTGGCTTCTTCCATTTCGGAAGAAGGTGTTTTCTGTAAAGAGGTTCTACCTCATTTATTAAACTCTTCCTTTCCTGGGAAGAGTATTTGTTTGGCTGGTGGTGGTTTTTAA MIQNSLPTQANILAKGIDINPLCFFCRNKTESGEHLFWQCKSSKEVWLYFFPKLNLVSNFFRGELVDSSKEVDISIAMKIIWSIWYFRNSIKRGAGFPDAKSIIRMVNSSYCEKNHLIGGAPIRFSPENLSSQRPWSPPPLGVWKINSDASWSEDQQRGGLGWIAHDSTGSLLCAGFKQINRKWPIKCLELEAMAVGLKNLLSHLERPFPRIIIEADSSEVISILNHRSDDISEAWIVAKKVADLAALVGDVTFSFSPRESNVEAHSLACFAVALNLLDSSNFLASSISEEGVFCKEVLPHLLNSSFPGKSICLAGGGF Homology
BLAST of Lcy07g008460 vs. ExPASy TrEMBL
Match: A0A1R3G1P9 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_29422 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 5.7e-21 Identity = 73/276 (26.45%), Postives = 121/276 (43.84%), Query Frame = 0
BLAST of Lcy07g008460 vs. ExPASy TrEMBL
Match: A0A7J6GQE2 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_014266 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 7.5e-21 Identity = 79/316 (25.00%), Postives = 136/316 (43.04%), Query Frame = 0
BLAST of Lcy07g008460 vs. ExPASy TrEMBL
Match: A0A1R3KHA2 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_01552 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 9.8e-21 Identity = 78/278 (28.06%), Postives = 125/278 (44.96%), Query Frame = 0
BLAST of Lcy07g008460 vs. ExPASy TrEMBL
Match: A0A6J5UE59 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23353 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.2e-20 Identity = 82/287 (28.57%), Postives = 129/287 (44.95%), Query Frame = 0
BLAST of Lcy07g008460 vs. ExPASy TrEMBL
Match: A0A6J5UF50 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23354 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.2e-20 Identity = 82/287 (28.57%), Postives = 129/287 (44.95%), Query Frame = 0
BLAST of Lcy07g008460 vs. NCBI nr
Match: XP_015385738.1 (uncharacterized protein LOC107177034 [Citrus sinensis]) HSP 1 Score: 122.9 bits (307), Expect = 5.1e-24 Identity = 81/282 (28.72%), Postives = 131/282 (46.45%), Query Frame = 0
BLAST of Lcy07g008460 vs. NCBI nr
Match: XP_015388376.1 (uncharacterized protein LOC102612209 [Citrus sinensis]) HSP 1 Score: 120.9 bits (302), Expect = 1.9e-23 Identity = 76/274 (27.74%), Postives = 139/274 (50.73%), Query Frame = 0
BLAST of Lcy07g008460 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis]) HSP 1 Score: 115.2 bits (287), Expect = 1.1e-21 Identity = 76/280 (27.14%), Postives = 127/280 (45.36%), Query Frame = 0
BLAST of Lcy07g008460 vs. NCBI nr
Match: OMO52016.1 (reverse transcriptase [Corchorus capsularis]) HSP 1 Score: 111.7 bits (278), Expect = 1.2e-20 Identity = 73/276 (26.45%), Postives = 121/276 (43.84%), Query Frame = 0
BLAST of Lcy07g008460 vs. NCBI nr
Match: KAF4385133.1 (hypothetical protein F8388_014266 [Cannabis sativa]) HSP 1 Score: 111.3 bits (277), Expect = 1.5e-20 Identity = 79/316 (25.00%), Postives = 136/316 (43.04%), Query Frame = 0
BLAST of Lcy07g008460 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 92.4 bits (228), Expect = 6.9e-19 Identity = 76/288 (26.39%), Postives = 120/288 (41.67%), Query Frame = 0
BLAST of Lcy07g008460 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 89.7 bits (221), Expect = 4.5e-18 Identity = 76/281 (27.05%), Postives = 124/281 (44.13%), Query Frame = 0
BLAST of Lcy07g008460 vs. TAIR 10
Match: AT2G02520.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 58.9 bits (141), Expect = 8.5e-09 Identity = 33/145 (22.76%), Postives = 71/145 (48.97%), Query Frame = 0
BLAST of Lcy07g008460 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.5e-05 Identity = 39/154 (25.32%), Postives = 63/154 (40.91%), Query Frame = 0
BLAST of Lcy07g008460 vs. TAIR 10
Match: AT4G10613.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 47.8 bits (112), Expect = 2.0e-05 Identity = 24/96 (25.00%), Postives = 44/96 (45.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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