Lcy07g008270 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g008270
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr07: 36622775 .. 36623228 (+)
RNA-Seq ExpressionLcy07g008270
SyntenyLcy07g008270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGCAATGGTGGAATCATGGATGAGCGAGCTGGGGAAGTGGAAGAACAGAGTCGAAGCTCAAAAGAAGAAGCCACTGATGCCCAAATCCAACCAGCAAACAGACCTCAAAAAACCCAAAAAGGACACCGTCGTCTCTGCAGATTCCGATGAAACCATCCTGTCGGAATCCACCATTTGTTTGCTCATAGATCGCTTTGCTCCCTTGTGATGCGCCGCCGGAGAAGTCGCTTTCTTCTCTGTTTTTTCTTTTTCCTTTTCTGTTTGTAATTTGATGAATATATATATGTATGTGTAGTGTAAATGAATTAATAATTGAAGCGACGGCCGGTGCCGGCGTTGGGTTTGGCCACCGCCACCGTGTTGGAGAGAGGAGAGAGGAGGAGTATGGCGGTGGCGGATTCGGATGGTTCTGGCTCTACGCTGGCTTTGAGTTTGAGCTGTTGAATTAG

mRNA sequence

ATGTCAGCAATGGTGGAATCATGGATGAGCGAGCTGGGGAAGTGGAAGAACAGAGTCGAAGCTCAAAAGAAGAAGCCACTGATGCCCAAATCCAACCAGCAAACAGACCTCAAAAAACCCAAAAAGGACACCGTCGTCTCTGCAGATTCCGATGAAACCATCCTGTCGGAATCCACCATTTGTTTGCTCATAGATCGCTTTGCTCCCTTTGTAAATGAATTAATAATTGAAGCGACGGCCGGTGCCGGCGTTGGGTTTGGCCACCGCCACCGTGTTGGAGAGAGGAGAGAGGAGGAGTATGGCGGTGGCGGATTCGGATGGTTCTGGCTCTACGCTGGCTTTGAGTTTGAGCTGTTGAATTAG

Coding sequence (CDS)

ATGTCAGCAATGGTGGAATCATGGATGAGCGAGCTGGGGAAGTGGAAGAACAGAGTCGAAGCTCAAAAGAAGAAGCCACTGATGCCCAAATCCAACCAGCAAACAGACCTCAAAAAACCCAAAAAGGACACCGTCGTCTCTGCAGATTCCGATGAAACCATCCTGTCGGAATCCACCATTTGTTTGCTCATAGATCGCTTTGCTCCCTTTGTAAATGAATTAATAATTGAAGCGACGGCCGGTGCCGGCGTTGGGTTTGGCCACCGCCACCGTGTTGGAGAGAGGAGAGAGGAGGAGTATGGCGGTGGCGGATTCGGATGGTTCTGGCTCTACGCTGGCTTTGAGTTTGAGCTGTTGAATTAG

Protein sequence

MSAMVESWMSELGKWKNRVEAQKKKPLMPKSNQQTDLKKPKKDTVVSADSDETILSESTICLLIDRFAPFVNELIIEATAGAGVGFGHRHRVGERREEEYGGGGFGWFWLYAGFEFELLN
Homology
BLAST of Lcy07g008270 vs. ExPASy TrEMBL
Match: A0A0A0LP24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237740 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.3e-14
Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = 0

Query: 1   MSAMVESWMSELGKWKNRVEAQ---KKKPLMPKSNQ-QTD-LKKPKKDTVVSADSDET-I 60
           MSAMVESWM+ELGKW+NRVEAQ    KKPLMPKS Q QTD  K+P K  +  +D  ET +
Sbjct: 37  MSAMVESWMNELGKWRNRVEAQDNNNKKPLMPKSKQLQTDHFKQPAKTHMADSDDTETSV 96

Query: 61  LSESTICLLIDRFAP 70
           LSESTICLLIDRFAP
Sbjct: 97  LSESTICLLIDRFAP 111

BLAST of Lcy07g008270 vs. ExPASy TrEMBL
Match: A0A5C7I594 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_011451 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.4e-04
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 0

Query: 1  MSAMVESWMSELGKWKNRVEAQKKKPL----MPKSNQQTDLK-KPKKDTVVSADSDETIL 60
          MSA+VE WM EL K + +V A KKKP       K  Q+ ++K K KK+T V  + +ET++
Sbjct: 1  MSAVVEIWMGELAKLREKVIA-KKKPFSSSRAEKEQQEVEVKQKAKKETRVHVE-EETVM 60

Query: 61 SESTICLLIDRFAP 70
          SE+T+CLL+DRF P
Sbjct: 61 SETTVCLLMDRFVP 72

BLAST of Lcy07g008270 vs. ExPASy TrEMBL
Match: A0A7N2MYN0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.3e-04
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 0

Query: 1  MSAMVESWMSELGKWKNRVEAQKKKPLMPKSNQQTDLKKPKKDTVVSADSDETILSESTI 60
          M+ +VE+WM EL K K +V+ + +KPL  K+ ++ + +K            E +LSE+TI
Sbjct: 1  MATVVETWMGELAKLKEKVKVKTQKPLFSKAKEEAEEEKEGATKEARIVQRENMLSETTI 60

Query: 61 CLLIDRFAPF 71
          CLL++RFAP+
Sbjct: 61 CLLMERFAPW 70

BLAST of Lcy07g008270 vs. ExPASy TrEMBL
Match: G7JF00 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_4g068560 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 7.0e-04
Identity = 31/76 (40.79%), Postives = 50/76 (65.79%), Query Frame = 0

Query: 1  MSAMVESWMSELGKWKNRVEAQKKKPLMPKS------NQQTDLKKPKKDTVVSADSDETI 60
          M+A+VE W+ EL K + +V   K KPL+ K+      N + ++  P +DT V++DS  + 
Sbjct: 1  MAAIVEGWVGELTKLREKVLPNKSKPLLSKAKHGADQNNKKNVGVPPRDTSVASDS--ST 60

Query: 61 LSESTICLLIDRFAPF 71
          +SE+T+CLL+DRF P+
Sbjct: 61 MSEATVCLLMDRFVPW 74

BLAST of Lcy07g008270 vs. NCBI nr
Match: KAG6571144.1 (hypothetical protein SDJN03_30059, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.3 bits (225), Expect = 6.2e-15
Identity = 56/79 (70.89%), Postives = 61/79 (77.22%), Query Frame = 0

Query: 1  MSAMVESWMSELGKWKNRVEAQ-KKKPLMPKSNQQTDLKKPKKDTVVSADSDETILS--- 60
          MSAMVESWMSELGKWKNRVEAQ KKKPLMPKSNQ        ++ VVSA SD+T      
Sbjct: 1  MSAMVESWMSELGKWKNRVEAQKKKKPLMPKSNQFL------QNDVVSAHSDDTETERER 60

Query: 61 ESTICLLIDRFAPFVNELI 76
          E+TICLLIDRFAP VN+LI
Sbjct: 61 ETTICLLIDRFAPSVNQLI 73

BLAST of Lcy07g008270 vs. NCBI nr
Match: KGN61756.1 (hypothetical protein Csa_006080 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 9.0e-14
Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = 0

Query: 1   MSAMVESWMSELGKWKNRVEAQ---KKKPLMPKSNQ-QTD-LKKPKKDTVVSADSDET-I 60
           MSAMVESWM+ELGKW+NRVEAQ    KKPLMPKS Q QTD  K+P K  +  +D  ET +
Sbjct: 37  MSAMVESWMNELGKWRNRVEAQDNNNKKPLMPKSKQLQTDHFKQPAKTHMADSDDTETSV 96

Query: 61  LSESTICLLIDRFAP 70
           LSESTICLLIDRFAP
Sbjct: 97  LSESTICLLIDRFAP 111

BLAST of Lcy07g008270 vs. NCBI nr
Match: KAG6605111.1 (hypothetical protein SDJN03_02428, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.9 bits (198), Expect = 8.4e-12
Identity = 59/110 (53.64%), Postives = 67/110 (60.91%), Query Frame = 0

Query: 1   MSAMVESWMSELGKWKNRVEAQKKKPLMPKSN--QQTDLKKPKKDTVVSADSD--ETILS 60
           M+AMVESWMSELGKWKNRVEAQKKKPLMPKS    Q DLK+ + + V+SADSD  E  LS
Sbjct: 1   MAAMVESWMSELGKWKNRVEAQKKKPLMPKSKLCHQRDLKESENNLVISADSDDREATLS 60

Query: 61  ESTICLLIDRFAPFVNELIIEATAGAGVGFGHRHRVGERREEEYGGGGFG 107
           +STI          VN+ IIE      +G           EEE GG G G
Sbjct: 61  DSTILC--------VNDFIIELRPAPALGLAVVS--PPCWEEERGGDGGG 100

BLAST of Lcy07g008270 vs. NCBI nr
Match: TXG64457.1 (hypothetical protein EZV62_011451 [Acer yangbiense])

HSP 1 Score: 55.1 bits (131), Expect = 4.9e-04
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 0

Query: 1  MSAMVESWMSELGKWKNRVEAQKKKPL----MPKSNQQTDLK-KPKKDTVVSADSDETIL 60
          MSA+VE WM EL K + +V A KKKP       K  Q+ ++K K KK+T V  + +ET++
Sbjct: 1  MSAVVEIWMGELAKLREKVIA-KKKPFSSSRAEKEQQEVEVKQKAKKETRVHVE-EETVM 60

Query: 61 SESTICLLIDRFAP 70
          SE+T+CLL+DRF P
Sbjct: 61 SETTVCLLMDRFVP 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LP244.3e-1470.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237740 PE=4 SV=1[more]
A0A5C7I5942.4e-0448.65Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_011451 PE=4 SV=1[more]
A0A7N2MYN05.3e-0440.00Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
G7JF007.0e-0440.79Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_4g068560 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6571144.16.2e-1570.89hypothetical protein SDJN03_30059, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN61756.19.0e-1470.67hypothetical protein Csa_006080 [Cucumis sativus][more]
KAG6605111.18.4e-1253.64hypothetical protein SDJN03_02428, partial [Cucurbita argyrosperma subsp. sorori... [more]
TXG64457.14.9e-0448.65hypothetical protein EZV62_011451 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..44
NoneNo IPR availablePANTHERPTHR36346EXPRESSED PROTEINcoord: 1..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g008270.1Lcy07g008270.1mRNA