Lcy07g008030 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g008030
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPeroxidase
LocationChr07: 36191780 .. 36192124 (-)
RNA-Seq ExpressionLcy07g008030
SyntenyLcy07g008030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCATTGCCACAGACCAACTACAGCCACCCCCCACCCCCGCCTCGAGCCATGTTGGTCACGATGGGTCGGTCAGGCCCCTCATTGCAGTTCTTGTAGTGATCGCCATCCTCGGCGCCATAGCCGGGATGATTGGGAGATTGTTCTCGGGTCGTCATTTATCTGGCCATGGCCAGTATGATGTTGAGGGATGGGTTGAGAAGAAATGCTCGTCTTGTTTGGATGGGAAGGTCGACGACATTCCACCGCTGAGGCCTCCATTTTCAGCCACCACCGGAGGTGATGTTCCGGTGGCAATGCCAATCCTGCCGGAGATAAAAGAAGAACAAGGACCTAAAGAGTAA

mRNA sequence

ATGTCCATTGCCACAGACCAACTACAGCCACCCCCCACCCCCGCCTCGAGCCATGTTGGTCACGATGGGTCGGTCAGGCCCCTCATTGCAGTTCTTGTAGTGATCGCCATCCTCGGCGCCATAGCCGGGATGATTGGGAGATTGTTCTCGGGTCGTCATTTATCTGGCCATGGCCAGTATGATGTTGAGGGATGGGTTGAGAAGAAATGCTCGTCTTGTTTGGATGGGAAGGTCGACGACATTCCACCGCTGAGGCCTCCATTTTCAGCCACCACCGGAGGTGATGTTCCGGTGGCAATGCCAATCCTGCCGGAGATAAAAGAAGAACAAGGACCTAAAGAGTAA

Coding sequence (CDS)

ATGTCCATTGCCACAGACCAACTACAGCCACCCCCCACCCCCGCCTCGAGCCATGTTGGTCACGATGGGTCGGTCAGGCCCCTCATTGCAGTTCTTGTAGTGATCGCCATCCTCGGCGCCATAGCCGGGATGATTGGGAGATTGTTCTCGGGTCGTCATTTATCTGGCCATGGCCAGTATGATGTTGAGGGATGGGTTGAGAAGAAATGCTCGTCTTGTTTGGATGGGAAGGTCGACGACATTCCACCGCTGAGGCCTCCATTTTCAGCCACCACCGGAGGTGATGTTCCGGTGGCAATGCCAATCCTGCCGGAGATAAAAGAAGAACAAGGACCTAAAGAGTAA

Protein sequence

MSIATDQLQPPPTPASSHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLSGHGQYDVEGWVEKKCSSCLDGKVDDIPPLRPPFSATTGGDVPVAMPILPEIKEEQGPKE
Homology
BLAST of Lcy07g008030 vs. ExPASy TrEMBL
Match: A0A6P3Z8L2 (transcription factor RBF1-like OS=Ziziphus jujuba OX=326968 GN=LOC107411194 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.2e-25
Identity = 70/121 (57.85%), Postives = 83/121 (68.60%), Query Frame = 0

Query: 1   MSIATDQLQPPPTPA-----SSHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLS 60
           MS      +PPP        ++H GH GSV P+IAVL VI ILG IAGMIGRL SGR + 
Sbjct: 1   MSTTPIDQEPPPMAMTQQAYTTHSGH-GSVGPVIAVLAVITILGVIAGMIGRLCSGRPIM 60

Query: 61  GHGQYDVEGWVEKKCSSCLDGKVDDIPPLRPPFSATTGGDVPVAMP--ILPEIKEEQGPK 115
           GHGQYD E WVE+KCS+CLDG+VD  PP   P + T+GG+VPVAMP  I  EIKEE+  +
Sbjct: 61  GHGQYDFEAWVERKCSTCLDGRVDPPPPPPRPPANTSGGEVPVAMPVEIQQEIKEEEEEE 120

BLAST of Lcy07g008030 vs. ExPASy TrEMBL
Match: A0A067KPY1 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04879 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.3e-23
Identity = 68/119 (57.14%), Postives = 78/119 (65.55%), Query Frame = 0

Query: 1   MSIATDQLQPPPTPA-----SSHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLS 60
           MS   DQ QPPP        ++H GH GSV P IAVL VI ILG +AGM+GRL SGR + 
Sbjct: 1   MSTPLDQQQPPPMEVTQQVYTAHTGH-GSVGPFIAVLAVITILGVLAGMVGRLCSGRRIM 60

Query: 61  GHGQYDVEGWVEKKCSSCLDGKVDDIPPLRPPFSATTGGDVPVAMPILPEIKEEQGPKE 115
           GHGQYD EGWVE+KCSSCLDG+VD  PP  PP       D+PVA P+     EE GP+E
Sbjct: 61  GHGQYDFEGWVERKCSSCLDGRVD--PPPAPP------ADIPVAEPL-----EETGPQE 105

BLAST of Lcy07g008030 vs. ExPASy TrEMBL
Match: A0A2N9FA50 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11601 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.9e-23
Identity = 65/110 (59.09%), Postives = 77/110 (70.00%), Query Frame = 0

Query: 6   DQLQPPPTPA-----SSHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLSGHGQY 65
           +Q QPPP P      ++H GH GSV P+IAVL VI ILG IAGMIGRL SGR + GHGQY
Sbjct: 15  EQSQPPPVPVTEQAYTAHSGH-GSVGPVIAVLAVITILGVIAGMIGRLCSGRRIMGHGQY 74

Query: 66  DVEGWVEKKCSSCLDGKVDDIPPLRPPFSATTGGDVPVAMPILPEIKEEQ 111
           D E WVE KCSSCLDG+VD  PP +PP + ++   +PV  P   EIKEE+
Sbjct: 75  DFESWVETKCSSCLDGRVDPPPPRQPPVN-SSDQSMPVETP--QEIKEEE 120

BLAST of Lcy07g008030 vs. ExPASy TrEMBL
Match: A0A6J1AJD8 (uncharacterized protein LOC110418593 OS=Herrania umbratica OX=108875 GN=LOC110418593 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.4e-22
Identity = 69/117 (58.97%), Postives = 78/117 (66.67%), Query Frame = 0

Query: 1   MSIATDQLQPPPTPAS-----SHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLS 60
           MS   +Q QPPP   S     +H GH GSV P+IAVL VI ILG IAGMIGRL SGR + 
Sbjct: 1   MSTPVEQQQPPPVGVSQQAYTAHTGH-GSVGPVIAVLAVITILGVIAGMIGRLCSGRPIM 60

Query: 61  GHGQYDVEGWVEKKCSSCLDGKVDDIPPLRPPFSATTGGDVPVAMP---ILPEIKEE 110
           GHGQYD EGWVE+KCSSCLDG+VD  PP RP        ++PVA+P      EIKEE
Sbjct: 61  GHGQYDFEGWVERKCSSCLDGRVDP-PPSRPT------EEMPVAVPAEETQQEIKEE 109

BLAST of Lcy07g008030 vs. ExPASy TrEMBL
Match: A0A5B7BYN3 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_043216 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.2e-22
Identity = 66/119 (55.46%), Postives = 80/119 (67.23%), Query Frame = 0

Query: 3   IATDQLQPPPTPA-----SSHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLSGH 62
           +   Q Q PP        ++H GH GS+ P+IAVL VI ILG IAGMIGRL SGR + GH
Sbjct: 6   VEPQQQQAPPMAVTEQAYTTHSGH-GSIGPVIAVLAVITILGVIAGMIGRLCSGRRIMGH 65

Query: 63  GQYDVEGWVEKKCSSCLDGKVDDIPPLRPPFSATT----GGD-VPVAMPI-LPEIKEEQ 111
           GQYD EGWVE+KCSSCLDG+VD  PP R     TT    GGD VPVA+P+  P+ ++E+
Sbjct: 66  GQYDFEGWVERKCSSCLDGRVDPPPPPRAAAENTTDNESGGDAVPVAVPVETPQERKEE 123

BLAST of Lcy07g008030 vs. NCBI nr
Match: KAG7035125.1 (hypothetical protein SDJN02_01920, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 165.6 bits (418), Expect = 2.5e-37
Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 0

Query: 1   MSIATDQLQPPPTPASSHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLSGHGQY 60
           MSIAT ++ P    ASSHVG DG   P+IAVLVV+ ILG +AGMIGRLFSGR L G GQY
Sbjct: 1   MSIATAEMMPRQA-ASSHVGADGPFGPVIAVLVVMVILGTVAGMIGRLFSGRRLVGGGQY 60

Query: 61  DVEGWVEKKCSSCLDGKVDDIPPLRPPFSATTGGDVPVAMPILPEIKEEQG 112
           DVEGWVEKKCSSC DGKVDD+PP  PP SAT GGDVP+AMPILPEIKEEQG
Sbjct: 61  DVEGWVEKKCSSCFDGKVDDVPPSGPPRSATAGGDVPMAMPILPEIKEEQG 110

BLAST of Lcy07g008030 vs. NCBI nr
Match: XP_023533131.1 (uncharacterized protein LOC111795113 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.9 bits (416), Expect = 4.2e-37
Identity = 85/111 (76.58%), Postives = 91/111 (81.98%), Query Frame = 0

Query: 1   MSIATDQLQPPPTPASSHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLSGHGQY 60
           MSIAT +  P    ASSHVG D    P+IAVLVVI ILG +AG+IGRLFSGR + G GQY
Sbjct: 1   MSIATAETMPRQA-ASSHVGADVPFGPVIAVLVVIVILGTVAGIIGRLFSGRRVVGGGQY 60

Query: 61  DVEGWVEKKCSSCLDGKVDDIPPLRPPFSATTGGDVPVAMPILPEIKEEQG 112
           DVEGWVEKKCSSCLDGKVDD+PP RPP SAT GGDVPVAMPILPEIKEEQG
Sbjct: 61  DVEGWVEKKCSSCLDGKVDDVPPSRPPRSATVGGDVPVAMPILPEIKEEQG 110

BLAST of Lcy07g008030 vs. NCBI nr
Match: XP_015874226.1 (transcription factor RBF1-like [Ziziphus jujuba])

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-24
Identity = 70/121 (57.85%), Postives = 83/121 (68.60%), Query Frame = 0

Query: 1   MSIATDQLQPPPTPA-----SSHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLS 60
           MS      +PPP        ++H GH GSV P+IAVL VI ILG IAGMIGRL SGR + 
Sbjct: 1   MSTTPIDQEPPPMAMTQQAYTTHSGH-GSVGPVIAVLAVITILGVIAGMIGRLCSGRPIM 60

Query: 61  GHGQYDVEGWVEKKCSSCLDGKVDDIPPLRPPFSATTGGDVPVAMP--ILPEIKEEQGPK 115
           GHGQYD E WVE+KCS+CLDG+VD  PP   P + T+GG+VPVAMP  I  EIKEE+  +
Sbjct: 61  GHGQYDFEAWVERKCSTCLDGRVDPPPPPPRPPANTSGGEVPVAMPVEIQQEIKEEEEEE 120

BLAST of Lcy07g008030 vs. NCBI nr
Match: DAD22363.1 (TPA_asm: hypothetical protein HUJ06_023826 [Nelumbo nucifera])

HSP 1 Score: 122.1 bits (305), Expect = 3.1e-24
Identity = 65/118 (55.08%), Postives = 80/118 (67.80%), Query Frame = 0

Query: 1   MSIATDQLQPPPTPA-----SSHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLS 60
           MS+  +Q QPPP        SSH  H GSV PLIAVL VI ILG +AGMIGRL SGR + 
Sbjct: 1   MSMPLEQQQPPPMVVNQQAFSSHSSH-GSVGPLIAVLAVITILGVVAGMIGRLCSGRSIM 60

Query: 61  GHGQYDVEGWVEKKCSSCLDGKVDDIPPLRPPFSATTGGDVPVAMPILPEIKEEQGPK 114
           GHGQYD EGWVE+KCSSC+DG++D  PP  PP +   G  +P+A+P+    + EQ P+
Sbjct: 61  GHGQYDFEGWVERKCSSCIDGRIDP-PPPPPPNTNVAGDSIPIAIPVGTPKQTEQPPQ 116

BLAST of Lcy07g008030 vs. NCBI nr
Match: KAF3435358.1 (hypothetical protein FNV43_RR22447 [Rhamnella rubrinervis])

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23
Identity = 68/117 (58.12%), Postives = 78/117 (66.67%), Query Frame = 0

Query: 1   MSIATDQLQPPPTPA-----SSHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLS 60
           MS      QPPP        ++H GH GSV P+I VL VI ILG IAGMIGRL SGR + 
Sbjct: 1   MSTTPIDQQPPPMAVTHQAYTTHSGH-GSVGPVIGVLAVITILGVIAGMIGRLCSGRPIM 60

Query: 61  GHGQYDVEGWVEKKCSSCLDGKVDDIPPLRPPFSATTGGDVPVAMPI--LPEIKEEQ 111
           GHGQYD EGWVEKKCS+CLDG+VD  PP   P    +G +VPVAMP+    EIKEE+
Sbjct: 61  GHGQYDFEGWVEKKCSTCLDGRVDYPPPRPQPPPTFSGEEVPVAMPVETPQEIKEEE 116

BLAST of Lcy07g008030 vs. TAIR 10
Match: AT3G57500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26520.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 1.8e-14
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 0

Query: 5   TDQLQPPPTPASSHVGHDGSVRPLIAVLVVIAILGAIAGMIGRLFSGRHLSGHGQYDVEG 64
           T  + PP     SH     S+  L+ VL VI IL  +AG+  RL  GRHLS  G +D+EG
Sbjct: 18  TIYIDPPSQDQPSHNSDHRSIETLVVVLAVITILSVLAGVFARLCGGRHLSHGGDHDIEG 77

Query: 65  WVEKKCSSCLDGKVDDI------PPLRPPFSA 91
           WVE+KC SC+D  +  +      PP  PP +A
Sbjct: 78  WVERKCRSCIDAGIPAVSAAPSPPPPPPPATA 109

BLAST of Lcy07g008030 vs. TAIR 10
Match: AT2G26520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57500.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 7.7e-13
Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0

Query: 9   QPPP----TPASSHVGHDG--SVRPLIAVLVVIAILGAIAGMIGRLFSGRHLSGHGQYDV 68
           QPPP    +  SS V   G  ++ P IAV +V+ +L  +A +IGRL SG+ + G+G YD+
Sbjct: 9   QPPPATEVSQDSSSVSSAGNSTIGPFIAVFIVVTVLCVLASVIGRLCSGKTILGYGDYDM 68

Query: 69  EGWVEKKCSSCLDGKV-------DDIPPLRPPFSATTGG 95
           E W E +C SC+DG +          PP R P   T+ G
Sbjct: 69  ERWAESRCGSCIDGHIHPHRPSPSPTPPPRQPLHHTSSG 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6P3Z8L25.2e-2557.85transcription factor RBF1-like OS=Ziziphus jujuba OX=326968 GN=LOC107411194 PE=4... [more]
A0A067KPY11.3e-2357.14Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04879 PE=4 SV=1[more]
A0A2N9FA504.9e-2359.09Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11601 PE=4 SV=1[more]
A0A6J1AJD82.4e-2258.97uncharacterized protein LOC110418593 OS=Herrania umbratica OX=108875 GN=LOC11041... [more]
A0A5B7BYN33.2e-2255.46Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_043216 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG7035125.12.5e-3775.68hypothetical protein SDJN02_01920, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023533131.14.2e-3776.58uncharacterized protein LOC111795113 [Cucurbita pepo subsp. pepo][more]
XP_015874226.11.1e-2457.85transcription factor RBF1-like [Ziziphus jujuba][more]
DAD22363.13.1e-2455.08TPA_asm: hypothetical protein HUJ06_023826 [Nelumbo nucifera][more]
KAF3435358.11.5e-2358.12hypothetical protein FNV43_RR22447 [Rhamnella rubrinervis][more]
Match NameE-valueIdentityDescription
AT3G57500.11.8e-1442.39unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G26520.17.7e-1339.39unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR33429:SF2OS01G0888850 PROTEINcoord: 7..93
NoneNo IPR availablePANTHERPTHR33429OS02G0708000 PROTEIN-RELATEDcoord: 7..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g008030.1Lcy07g008030.1mRNA