Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATCTGTACGGAACTTCCCCTTCTTCGGATGTTGTTGGCTTGCCCCATGACCCAGAAGATTTCTCTTCTTTAATCAATCAGCACCTTCAAACCACCACGTCTTCTTCTTCCTCCCCTTCTTGCGTCTCCTTCAAGAACAAGTTCATGCCACTGTTGCATTCTCAACCTCCTTGGCACTCTTCGTCTCTGTTTTCGCGGCGGCCGGACTCCACCTCCGTTGCCAGAGTGTCCTGCATGCTTGATTTTCCAAGGCATCGACTTCACTCGAGTTGTGTTTTGAACCACGCTTTGTCGGATTGTAGTGTTAGGGATGTGAGATTTACCGATGCTTCGTATTTGGCTGTGAACTCCACTTGCGGCGGCGTGAAATTGTCCGATCCTGGGGATTTCTTTAAAGAAATTTGATCCTCTTTTGAAGGGTGGCGATGTGCCTGAAGTTCCGTCCAGTACTGATCTGCCTCGAAGTTCATCGAAGCGAAGTAGAAATGCTGAGGTCCATAATATGTCGGAGAAGGTCAGTTTCAATCTAAGATTCGAAGACGAAGACGAAGACGAGGAGGCGAGAGACGAACCCTAG
mRNA sequence
ATGGCGGATCTGTACGGAACTTCCCCTTCTTCGGATGTTGTTGGCTTGCCCCATGACCCAGAAGATTTCTCTTCTTTAATCAATCAGCACCTTCAAACCACCACGTCTTCTTCTTCCTCCCCTTCTTGCGTCTCCTTCAAGAACAAGTTCATGCCACTGTTGCATTCTCAACCTCCTTGGCACTCTTCGTCTCTGTTTTCGCGGCGGCCGGACTCCACCTCCGTTGCCAGAGTGTCCTGCATGCTTGATTTTCCAAGGCATCGACTTCACTCGAGTTGTGTTTTGAACCACGCTTTGTCGGATTGTAGTGTTAGGGATGTGAGATTTACCGATGCTTCGTATTTGGCTGGTGGCGATGTGCCTGAAGTTCCGTCCAGTACTGATCTGCCTCGAAGTTCATCGAAGCGAAGTAGAAATGCTGAGGTCCATAATATGTCGGAGAAGGTCAGTTTCAATCTAAGATTCGAAGACGAAGACGAAGACGAGGAGGCGAGAGACGAACCCTAG
Coding sequence (CDS)
ATGGCGGATCTGTACGGAACTTCCCCTTCTTCGGATGTTGTTGGCTTGCCCCATGACCCAGAAGATTTCTCTTCTTTAATCAATCAGCACCTTCAAACCACCACGTCTTCTTCTTCCTCCCCTTCTTGCGTCTCCTTCAAGAACAAGTTCATGCCACTGTTGCATTCTCAACCTCCTTGGCACTCTTCGTCTCTGTTTTCGCGGCGGCCGGACTCCACCTCCGTTGCCAGAGTGTCCTGCATGCTTGATTTTCCAAGGCATCGACTTCACTCGAGTTGTGTTTTGAACCACGCTTTGTCGGATTGTAGTGTTAGGGATGTGAGATTTACCGATGCTTCGTATTTGGCTGGTGGCGATGTGCCTGAAGTTCCGTCCAGTACTGATCTGCCTCGAAGTTCATCGAAGCGAAGTAGAAATGCTGAGGTCCATAATATGTCGGAGAAGGTCAGTTTCAATCTAAGATTCGAAGACGAAGACGAAGACGAGGAGGCGAGAGACGAACCCTAG
Protein sequence
MADLYGTSPSSDVVGLPHDPEDFSSLINQHLQTTTSSSSSPSCVSFKNKFMPLLHSQPPWHSSSLFSRRPDSTSVARVSCMLDFPRHRLHSSCVLNHALSDCSVRDVRFTDASYLAGGDVPEVPSSTDLPRSSSKRSRNAEVHNMSEKVSFNLRFEDEDEDEEARDEP
Homology
BLAST of Lcy07g007750 vs. ExPASy TrEMBL
Match:
A0A5A7V331 (Transcription factor SPATULA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00490 PE=4 SV=1)
HSP 1 Score: 243.0 bits (619), Expect = 8.7e-61
Identity = 133/206 (64.56%), Postives = 139/206 (67.48%), Query Frame = 0
Query: 1 MADLYGTSPSSDVVGLPHDPEDFSSLINQHLQTTTSSSSSPSCVSFKNKFMPLLHSQPPW 60
MADLYGTSPSSDVVGLPHDPEDFSS IN HLQTTTSS+SSPSCVSFKNKFMPLLHSQPPW
Sbjct: 1 MADLYGTSPSSDVVGLPHDPEDFSSFINHHLQTTTSSTSSPSCVSFKNKFMPLLHSQPPW 60
Query: 61 HSSSLFSRRPDSTSVARVSCMLDFPRHRLHSSCVLNHALSDCSVRDVRFTDASYLA---- 120
HSS +FSRRPDSTSV +SCMLDFP RLHSS VLNHALSDCSVRDVRF DASYLA
Sbjct: 61 HSSPMFSRRPDSTSVPGMSCMLDFPEDRLHSSRVLNHALSDCSVRDVRFADASYLAVNST 120
Query: 121 ------------------------------------------------------GGDVPE 149
GGD+PE
Sbjct: 121 CGGVKLSDPGDFVKESSDNAFSSSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEGGDLPE 180
BLAST of Lcy07g007750 vs. ExPASy TrEMBL
Match:
E5GB79 (Serine/threonine-protein kinase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 243.0 bits (619), Expect = 8.7e-61
Identity = 133/206 (64.56%), Postives = 139/206 (67.48%), Query Frame = 0
Query: 1 MADLYGTSPSSDVVGLPHDPEDFSSLINQHLQTTTSSSSSPSCVSFKNKFMPLLHSQPPW 60
MADLYGTSPSSDVVGLPHDPEDFSS IN HLQTTTSS+SSPSCVSFKNKFMPLLHSQPPW
Sbjct: 1 MADLYGTSPSSDVVGLPHDPEDFSSFINHHLQTTTSSTSSPSCVSFKNKFMPLLHSQPPW 60
Query: 61 HSSSLFSRRPDSTSVARVSCMLDFPRHRLHSSCVLNHALSDCSVRDVRFTDASYLA---- 120
HSS +FSRRPDSTSV +SCMLDFP RLHSS VLNHALSDCSVRDVRF DASYLA
Sbjct: 61 HSSPMFSRRPDSTSVPGMSCMLDFPEDRLHSSRVLNHALSDCSVRDVRFADASYLAVNST 120
Query: 121 ------------------------------------------------------GGDVPE 149
GGD+PE
Sbjct: 121 CGGVKLSDPGDFVKESSDNAFSSSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEGGDLPE 180
BLAST of Lcy07g007750 vs. ExPASy TrEMBL
Match:
A0A1S3BA80 (transcription factor SPATULA-like OS=Cucumis melo OX=3656 GN=LOC103487874 PE=4 SV=1)
HSP 1 Score: 243.0 bits (619), Expect = 8.7e-61
Identity = 133/206 (64.56%), Postives = 139/206 (67.48%), Query Frame = 0
Query: 1 MADLYGTSPSSDVVGLPHDPEDFSSLINQHLQTTTSSSSSPSCVSFKNKFMPLLHSQPPW 60
MADLYGTSPSSDVVGLPHDPEDFSS IN HLQTTTSS+SSPSCVSFKNKFMPLLHSQPPW
Sbjct: 1 MADLYGTSPSSDVVGLPHDPEDFSSFINHHLQTTTSSTSSPSCVSFKNKFMPLLHSQPPW 60
Query: 61 HSSSLFSRRPDSTSVARVSCMLDFPRHRLHSSCVLNHALSDCSVRDVRFTDASYLA---- 120
HSS +FSRRPDSTSV +SCMLDFP RLHSS VLNHALSDCSVRDVRF DASYLA
Sbjct: 61 HSSPMFSRRPDSTSVPGMSCMLDFPEDRLHSSRVLNHALSDCSVRDVRFADASYLAVNST 120
Query: 121 ------------------------------------------------------GGDVPE 149
GGD+PE
Sbjct: 121 CGGVKLSDPGDFVKESSDNAFSSSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEGGDLPE 180
BLAST of Lcy07g007750 vs. ExPASy TrEMBL
Match:
A0A0A0LKR9 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356640 PE=4 SV=1)
HSP 1 Score: 236.9 bits (603), Expect = 6.2e-59
Identity = 130/206 (63.11%), Postives = 138/206 (66.99%), Query Frame = 0
Query: 1 MADLYGTSPSSDVVGLPHDPEDFSSLINQHLQTTTSSSSSPSCVSFKNKFMPLLHSQPPW 60
MADLYGTSPSSDVVGLPHDPEDFSS IN HLQTTTSS+SSPSCVSFKNKFMPLLHSQPPW
Sbjct: 1 MADLYGTSPSSDVVGLPHDPEDFSSFINHHLQTTTSSASSPSCVSFKNKFMPLLHSQPPW 60
Query: 61 HSSSLFSRRPDSTSVARVSCMLDFPRHRLHSSCVLNHALSDCSVRDVRFTDASYLA---- 120
HSS +FSRRPDSTSV +SCMLDFP RL SS VLNHALSDC+VRDVRF DASYLA
Sbjct: 61 HSSPMFSRRPDSTSVPGMSCMLDFPEDRLQSSRVLNHALSDCNVRDVRFADASYLAVNST 120
Query: 121 ------------------------------------------------------GGDVPE 149
GGD+PE
Sbjct: 121 CGGVKLSDPGDFLKESSDNAFSSSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEGGDLPE 180
BLAST of Lcy07g007750 vs. ExPASy TrEMBL
Match:
A0A6J1HCX3 (transcription factor PIF3-like OS=Cucurbita moschata OX=3662 GN=LOC111462930 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 1.5e-52
Identity = 124/206 (60.19%), Postives = 129/206 (62.62%), Query Frame = 0
Query: 1 MADLYGTSPSSDVVGLPHDPEDFSSLINQHLQTTTSSSSSPSCVSFKNKFMPLLHSQPPW 60
MADLYGTSPSSDVV LPHDPE FSS IN HLQT TSS+SSPS VSFKNKF PLLHSQPPW
Sbjct: 1 MADLYGTSPSSDVVALPHDPEGFSSFINPHLQTNTSSASSPSFVSFKNKFTPLLHSQPPW 60
Query: 61 HSSSLFSRRPDSTSVARVSCMLDFPRHRLHSSCVLNHALSDCSVRDVRFTDASYLA---- 120
HSSSLFSRRP+STSVA VSCMLD P L SS LNHALSDCSVRDVRF+DA +LA
Sbjct: 61 HSSSLFSRRPESTSVAGVSCMLDSPEDWLQSSRALNHALSDCSVRDVRFSDAPFLAMNST 120
Query: 121 ------------------------------------------------------GGDVPE 149
G DVPE
Sbjct: 121 CGGVKLSDPGDFVKESSDNAFSSSGAVDSDTNAPLKRRDLSSENDPGDFSCDSEGADVPE 180
BLAST of Lcy07g007750 vs. NCBI nr
Match:
XP_008444604.1 (PREDICTED: transcription factor SPATULA-like [Cucumis melo])
HSP 1 Score: 243.0 bits (619), Expect = 1.8e-60
Identity = 133/206 (64.56%), Postives = 139/206 (67.48%), Query Frame = 0
Query: 1 MADLYGTSPSSDVVGLPHDPEDFSSLINQHLQTTTSSSSSPSCVSFKNKFMPLLHSQPPW 60
MADLYGTSPSSDVVGLPHDPEDFSS IN HLQTTTSS+SSPSCVSFKNKFMPLLHSQPPW
Sbjct: 1 MADLYGTSPSSDVVGLPHDPEDFSSFINHHLQTTTSSTSSPSCVSFKNKFMPLLHSQPPW 60
Query: 61 HSSSLFSRRPDSTSVARVSCMLDFPRHRLHSSCVLNHALSDCSVRDVRFTDASYLA---- 120
HSS +FSRRPDSTSV +SCMLDFP RLHSS VLNHALSDCSVRDVRF DASYLA
Sbjct: 61 HSSPMFSRRPDSTSVPGMSCMLDFPEDRLHSSRVLNHALSDCSVRDVRFADASYLAVNST 120
Query: 121 ------------------------------------------------------GGDVPE 149
GGD+PE
Sbjct: 121 CGGVKLSDPGDFVKESSDNAFSSSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEGGDLPE 180
BLAST of Lcy07g007750 vs. NCBI nr
Match:
ADN33721.1 (serine/threonine-protein kinase [Cucumis melo subsp. melo])
HSP 1 Score: 243.0 bits (619), Expect = 1.8e-60
Identity = 133/206 (64.56%), Postives = 139/206 (67.48%), Query Frame = 0
Query: 1 MADLYGTSPSSDVVGLPHDPEDFSSLINQHLQTTTSSSSSPSCVSFKNKFMPLLHSQPPW 60
MADLYGTSPSSDVVGLPHDPEDFSS IN HLQTTTSS+SSPSCVSFKNKFMPLLHSQPPW
Sbjct: 1 MADLYGTSPSSDVVGLPHDPEDFSSFINHHLQTTTSSTSSPSCVSFKNKFMPLLHSQPPW 60
Query: 61 HSSSLFSRRPDSTSVARVSCMLDFPRHRLHSSCVLNHALSDCSVRDVRFTDASYLA---- 120
HSS +FSRRPDSTSV +SCMLDFP RLHSS VLNHALSDCSVRDVRF DASYLA
Sbjct: 61 HSSPMFSRRPDSTSVPGMSCMLDFPEDRLHSSRVLNHALSDCSVRDVRFADASYLAVNST 120
Query: 121 ------------------------------------------------------GGDVPE 149
GGD+PE
Sbjct: 121 CGGVKLSDPGDFVKESSDNAFSSSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEGGDLPE 180
BLAST of Lcy07g007750 vs. NCBI nr
Match:
KAA0060916.1 (transcription factor SPATULA-like [Cucumis melo var. makuwa])
HSP 1 Score: 243.0 bits (619), Expect = 1.8e-60
Identity = 133/206 (64.56%), Postives = 139/206 (67.48%), Query Frame = 0
Query: 1 MADLYGTSPSSDVVGLPHDPEDFSSLINQHLQTTTSSSSSPSCVSFKNKFMPLLHSQPPW 60
MADLYGTSPSSDVVGLPHDPEDFSS IN HLQTTTSS+SSPSCVSFKNKFMPLLHSQPPW
Sbjct: 1 MADLYGTSPSSDVVGLPHDPEDFSSFINHHLQTTTSSTSSPSCVSFKNKFMPLLHSQPPW 60
Query: 61 HSSSLFSRRPDSTSVARVSCMLDFPRHRLHSSCVLNHALSDCSVRDVRFTDASYLA---- 120
HSS +FSRRPDSTSV +SCMLDFP RLHSS VLNHALSDCSVRDVRF DASYLA
Sbjct: 61 HSSPMFSRRPDSTSVPGMSCMLDFPEDRLHSSRVLNHALSDCSVRDVRFADASYLAVNST 120
Query: 121 ------------------------------------------------------GGDVPE 149
GGD+PE
Sbjct: 121 CGGVKLSDPGDFVKESSDNAFSSSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEGGDLPE 180
BLAST of Lcy07g007750 vs. NCBI nr
Match:
XP_011649579.1 (transcription factor SPATULA [Cucumis sativus] >KGN62490.1 hypothetical protein Csa_018607 [Cucumis sativus])
HSP 1 Score: 236.9 bits (603), Expect = 1.3e-58
Identity = 130/206 (63.11%), Postives = 138/206 (66.99%), Query Frame = 0
Query: 1 MADLYGTSPSSDVVGLPHDPEDFSSLINQHLQTTTSSSSSPSCVSFKNKFMPLLHSQPPW 60
MADLYGTSPSSDVVGLPHDPEDFSS IN HLQTTTSS+SSPSCVSFKNKFMPLLHSQPPW
Sbjct: 1 MADLYGTSPSSDVVGLPHDPEDFSSFINHHLQTTTSSASSPSCVSFKNKFMPLLHSQPPW 60
Query: 61 HSSSLFSRRPDSTSVARVSCMLDFPRHRLHSSCVLNHALSDCSVRDVRFTDASYLA---- 120
HSS +FSRRPDSTSV +SCMLDFP RL SS VLNHALSDC+VRDVRF DASYLA
Sbjct: 61 HSSPMFSRRPDSTSVPGMSCMLDFPEDRLQSSRVLNHALSDCNVRDVRFADASYLAVNST 120
Query: 121 ------------------------------------------------------GGDVPE 149
GGD+PE
Sbjct: 121 CGGVKLSDPGDFLKESSDNAFSSSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEGGDLPE 180
BLAST of Lcy07g007750 vs. NCBI nr
Match:
XP_038884958.1 (transcription factor SPATULA-like [Benincasa hispida])
HSP 1 Score: 234.2 bits (596), Expect = 8.3e-58
Identity = 130/206 (63.11%), Postives = 134/206 (65.05%), Query Frame = 0
Query: 1 MADLYGTSPSSDVVGLPHDPEDFSSLINQHLQTTTSSSSSPSCVSFKNKFMPLLHSQPPW 60
MADLYGTSPSSDVVGLPHDPEDFSS IN HLQTTTSS+SSPSCVSFKNKFMPLLHSQPPW
Sbjct: 1 MADLYGTSPSSDVVGLPHDPEDFSSFINHHLQTTTSSASSPSCVSFKNKFMPLLHSQPPW 60
Query: 61 HSSSLFSRRPDSTSVARVSCMLDFPRHRLHSSCVLNHALSDCSVRDVRFTDASYLA---- 120
HS +F RRPDSTSV VSCMLD P RL SS VLNHALSDCSVRDVRF D SYLA
Sbjct: 61 HSPPMFPRRPDSTSVPGVSCMLDVPEDRLQSSRVLNHALSDCSVRDVRFADTSYLAVNST 120
Query: 121 ------------------------------------------------------GGDVPE 149
GGDVPE
Sbjct: 121 CGGVKLSDPGDFIKENSDNAFSSSGAVDSDSNTPLKRRGLSSENDLGDFSCDSEGGDVPE 180
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7V331 | 8.7e-61 | 64.56 | Transcription factor SPATULA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| E5GB79 | 8.7e-61 | 64.56 | Serine/threonine-protein kinase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
| A0A1S3BA80 | 8.7e-61 | 64.56 | transcription factor SPATULA-like OS=Cucumis melo OX=3656 GN=LOC103487874 PE=4 S... | [more] |
| A0A0A0LKR9 | 6.2e-59 | 63.11 | BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356640 PE=4 S... | [more] |
| A0A6J1HCX3 | 1.5e-52 | 60.19 | transcription factor PIF3-like OS=Cucurbita moschata OX=3662 GN=LOC111462930 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_008444604.1 | 1.8e-60 | 64.56 | PREDICTED: transcription factor SPATULA-like [Cucumis melo] | [more] |
| ADN33721.1 | 1.8e-60 | 64.56 | serine/threonine-protein kinase [Cucumis melo subsp. melo] | [more] |
| KAA0060916.1 | 1.8e-60 | 64.56 | transcription factor SPATULA-like [Cucumis melo var. makuwa] | [more] |
| XP_011649579.1 | 1.3e-58 | 63.11 | transcription factor SPATULA [Cucumis sativus] >KGN62490.1 hypothetical protein ... | [more] |
| XP_038884958.1 | 8.3e-58 | 63.11 | transcription factor SPATULA-like [Benincasa hispida] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
